View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19630_high_3 (Length: 552)

Name: NF19630_high_3
Description: NF19630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19630_high_3
NF19630_high_3
[»] scaffold0003 (1 HSPs)
scaffold0003 (14-538)||(25669-26193)
[»] chr7 (31 HSPs)
chr7 (14-538)||(16436039-16436563)
chr7 (100-512)||(3171903-3172316)
chr7 (112-481)||(9128655-9129026)
chr7 (64-297)||(20911716-20911951)
chr7 (323-536)||(20911939-20912152)
chr7 (356-512)||(8325422-8325579)
chr7 (203-409)||(16195661-16195865)
chr7 (353-504)||(15755901-15756054)
chr7 (355-466)||(26427076-26427188)
chr7 (352-422)||(17151034-17151105)
chr7 (382-423)||(6210574-6210615)
chr7 (203-255)||(11622031-11622084)
chr7 (382-423)||(12246474-12246515)
chr7 (203-423)||(13487797-13488014)
chr7 (382-423)||(14252963-14253004)
chr7 (382-423)||(14278127-14278168)
chr7 (203-256)||(26427287-26427340)
chr7 (382-423)||(39293370-39293411)
chr7 (382-423)||(45148083-45148124)
chr7 (380-423)||(13460840-13460883)
chr7 (382-423)||(14974189-14974230)
chr7 (382-423)||(15403665-15403706)
chr7 (382-423)||(16065057-16065098)
chr7 (382-423)||(19066114-19066155)
chr7 (213-250)||(21500896-21500933)
chr7 (207-255)||(33291399-33291448)
chr7 (382-423)||(44306900-44306941)
chr7 (449-525)||(9129044-9129120)
chr7 (209-249)||(11227624-11227664)
chr7 (209-249)||(16093507-16093547)
chr7 (212-255)||(16175298-16175342)
[»] chr3 (31 HSPs)
chr3 (64-512)||(13438463-13438916)
chr3 (100-511)||(10724893-10725295)
chr3 (109-417)||(12254141-12254451)
chr3 (109-483)||(8022692-8023069)
chr3 (346-511)||(8853513-8853679)
chr3 (204-483)||(19633259-19633536)
chr3 (212-483)||(6808853-6809124)
chr3 (334-505)||(16220307-16220479)
chr3 (109-423)||(2547791-2548105)
chr3 (64-159)||(16220071-16220167)
chr3 (449-526)||(8022598-8022675)
chr3 (382-423)||(11401079-11401120)
chr3 (382-423)||(17385351-17385392)
chr3 (382-423)||(54040207-54040248)
chr3 (382-423)||(54049494-54049535)
chr3 (203-255)||(17385507-17385559)
chr3 (353-420)||(21094218-21094286)
chr3 (289-479)||(25486942-25487131)
chr3 (382-424)||(31413910-31413952)
chr3 (382-423)||(15551127-15551168)
chr3 (382-423)||(17391840-17391881)
chr3 (353-420)||(19978361-19978429)
chr3 (388-423)||(8603174-8603209)
chr3 (382-412)||(21765307-21765337)
chr3 (384-422)||(25606936-25606974)
chr3 (353-439)||(27050223-27050309)
chr3 (382-423)||(9637725-9637766)
chr3 (212-256)||(10711464-10711509)
chr3 (382-423)||(17760066-17760107)
chr3 (382-423)||(19061386-19061427)
chr3 (382-423)||(25105584-25105625)
[»] chr1 (3 HSPs)
chr1 (130-537)||(21198989-21199387)
chr1 (382-423)||(20252698-20252739)
chr1 (382-423)||(33395840-33395881)
[»] chr8 (21 HSPs)
chr8 (96-483)||(24623250-24623636)
chr8 (115-477)||(25261800-25262161)
chr8 (293-512)||(23543734-23543955)
chr8 (352-483)||(18032796-18032927)
chr8 (64-218)||(18179027-18179184)
chr8 (83-310)||(18826929-18827154)
chr8 (64-159)||(23543603-23543708)
chr8 (382-483)||(31195906-31196007)
chr8 (204-255)||(15550308-15550360)
chr8 (204-250)||(15662368-15662414)
chr8 (382-423)||(16041166-16041207)
chr8 (382-423)||(16042842-16042883)
chr8 (382-423)||(17500518-17500559)
chr8 (382-423)||(18610760-18610801)
chr8 (382-423)||(25608642-25608683)
chr8 (382-422)||(17265409-17265449)
chr8 (449-528)||(24623163-24623243)
chr8 (203-252)||(16216552-16216602)
chr8 (382-423)||(20177661-20177702)
chr8 (382-423)||(20222388-20222429)
chr8 (212-256)||(28932831-28932876)
[»] chr6 (22 HSPs)
chr6 (64-483)||(10973246-10973665)
chr6 (111-425)||(12975026-12975341)
chr6 (64-479)||(19728666-19729099)
chr6 (204-421)||(23295742-23295959)
chr6 (353-504)||(1560321-1560474)
chr6 (353-483)||(5485934-5486064)
chr6 (356-483)||(24217293-24217421)
chr6 (382-423)||(12466180-12466221)
chr6 (212-256)||(15482334-15482379)
chr6 (382-423)||(16374881-16374922)
chr6 (382-423)||(19627830-19627871)
chr6 (382-423)||(22595123-22595164)
chr6 (382-423)||(31162518-31162559)
chr6 (382-423)||(35010943-35010984)
chr6 (209-249)||(12466005-12466045)
chr6 (204-255)||(22542053-22542105)
chr6 (449-528)||(5486081-5486160)
chr6 (388-423)||(11374489-11374524)
chr6 (388-423)||(29162148-29162183)
chr6 (385-423)||(17858014-17858052)
chr6 (382-423)||(17084982-17085023)
chr6 (204-255)||(13122255-13122307)
[»] chr5 (17 HSPs)
chr5 (64-478)||(19317789-19318220)
chr5 (64-483)||(19266821-19267243)
chr5 (330-477)||(25340876-25341024)
chr5 (138-255)||(21298359-21298478)
chr5 (138-255)||(21304065-21304184)
chr5 (138-255)||(21311902-21312021)
chr5 (353-477)||(37275744-37275869)
chr5 (356-477)||(37278015-37278137)
chr5 (382-423)||(14343508-14343549)
chr5 (382-423)||(34937951-34937992)
chr5 (387-423)||(16837014-16837050)
chr5 (378-421)||(26058400-26058443)
chr5 (384-422)||(18532420-18532458)
chr5 (384-422)||(22055384-22055422)
chr5 (217-255)||(37278239-37278276)
chr5 (382-423)||(11765053-11765094)
chr5 (212-253)||(19049553-19049594)
[»] chr2 (19 HSPs)
chr2 (178-483)||(18994704-18995007)
chr2 (134-483)||(22576478-22576825)
chr2 (381-538)||(24533276-24533426)
chr2 (449-529)||(23157753-23157834)
chr2 (449-529)||(23569010-23569091)
chr2 (204-255)||(28579344-28579396)
chr2 (382-423)||(7513682-7513723)
chr2 (382-423)||(22331166-22331207)
chr2 (382-423)||(42180029-42180070)
chr2 (382-423)||(45619700-45619741)
chr2 (330-483)||(23157852-23158006)
chr2 (330-483)||(23569109-23569263)
chr2 (463-526)||(22575665-22575728)
chr2 (353-423)||(23154430-23154501)
chr2 (353-423)||(23565687-23565758)
chr2 (211-249)||(21652981-21653019)
chr2 (384-422)||(24342999-24343037)
chr2 (203-255)||(18331808-18331861)
chr2 (382-483)||(21652747-21652851)
[»] scaffold0508 (1 HSPs)
scaffold0508 (271-446)||(5827-6002)
[»] scaffold0412 (2 HSPs)
scaffold0412 (64-312)||(1755-2004)
scaffold0412 (356-483)||(1625-1751)
[»] chr4 (25 HSPs)
chr4 (314-505)||(18713408-18713601)
chr4 (314-505)||(18667736-18667929)
chr4 (100-252)||(11775027-11775182)
chr4 (388-538)||(11774736-11774879)
chr4 (113-255)||(12451935-12452083)
chr4 (449-528)||(21958553-21958633)
chr4 (352-483)||(18420489-18420621)
chr4 (361-479)||(20847344-20847463)
chr4 (356-439)||(14616495-14616578)
chr4 (353-423)||(18173306-18173379)
chr4 (212-255)||(18420349-18420391)
chr4 (380-423)||(41918413-41918456)
chr4 (356-423)||(19076291-19076360)
chr4 (382-423)||(19699233-19699274)
chr4 (382-423)||(19709818-19709859)
chr4 (382-423)||(40902365-40902406)
chr4 (331-398)||(12452118-12452186)
chr4 (353-423)||(13933304-13933375)
chr4 (384-422)||(15676507-15676545)
chr4 (203-256)||(16028761-16028815)
chr4 (356-420)||(1920034-1920099)
chr4 (429-483)||(5889787-5889843)
chr4 (203-256)||(10115823-10115876)
chr4 (203-255)||(11923545-11923598)
chr4 (382-423)||(15215506-15215547)
[»] scaffold0024 (2 HSPs)
scaffold0024 (210-483)||(100940-101214)
scaffold0024 (113-159)||(100839-100885)
[»] scaffold0123 (3 HSPs)
scaffold0123 (203-420)||(33941-34158)
scaffold0123 (332-423)||(33830-33924)
scaffold0123 (113-159)||(34177-34223)
[»] scaffold1869 (1 HSPs)
scaffold1869 (203-477)||(742-1013)
[»] scaffold0002 (2 HSPs)
scaffold0002 (209-392)||(95101-95282)
scaffold0002 (356-423)||(295582-295652)
[»] scaffold0161 (2 HSPs)
scaffold0161 (330-423)||(3767-3863)
scaffold0161 (203-255)||(3346-3399)
[»] scaffold0040 (1 HSPs)
scaffold0040 (64-310)||(48564-48808)
[»] scaffold0186 (1 HSPs)
scaffold0186 (382-504)||(11451-11574)
[»] scaffold0005 (1 HSPs)
scaffold0005 (356-439)||(200799-200882)
[»] scaffold0317 (1 HSPs)
scaffold0317 (382-483)||(15511-15613)
[»] scaffold0058 (1 HSPs)
scaffold0058 (352-480)||(79270-79398)
[»] scaffold0299 (1 HSPs)
scaffold0299 (357-423)||(9663-9732)
[»] scaffold0115 (1 HSPs)
scaffold0115 (382-459)||(20182-20260)
[»] scaffold0396 (1 HSPs)
scaffold0396 (382-423)||(166-207)
[»] scaffold0138 (3 HSPs)
scaffold0138 (382-423)||(26806-26847)
scaffold0138 (382-423)||(27821-27862)
scaffold0138 (382-423)||(39817-39858)
[»] scaffold0009 (1 HSPs)
scaffold0009 (382-423)||(256041-256082)
[»] scaffold0231 (2 HSPs)
scaffold0231 (209-249)||(14396-14436)
scaffold0231 (382-423)||(14588-14629)
[»] scaffold0218 (1 HSPs)
scaffold0218 (115-159)||(28039-28083)
[»] scaffold0070 (2 HSPs)
scaffold0070 (203-255)||(46912-46964)
scaffold0070 (356-423)||(46751-46819)
[»] scaffold0205 (1 HSPs)
scaffold0205 (382-420)||(4141-4179)
[»] scaffold0468 (1 HSPs)
scaffold0468 (390-423)||(12630-12663)
[»] scaffold0191 (1 HSPs)
scaffold0191 (382-423)||(315-356)
[»] scaffold0112 (1 HSPs)
scaffold0112 (382-423)||(12211-12252)
[»] scaffold0090 (1 HSPs)
scaffold0090 (382-423)||(36421-36462)
[»] scaffold0086 (1 HSPs)
scaffold0086 (382-423)||(11063-11104)
[»] scaffold0017 (1 HSPs)
scaffold0017 (382-423)||(11127-11168)
[»] scaffold0282 (1 HSPs)
scaffold0282 (212-256)||(20432-20474)


Alignment Details
Target: scaffold0003 (Bit Score: 497; Significance: 0; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 14 - 538
Target Start/End: Original strand, 25669 - 26193
Alignment:
Q  14 cagagaggaggggaaattctgatttgaagagagagaaagtgagtagagaaatgattatcatgttgatacttttggtgatatgaatagatgaattaatgat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  25669 cagagaggaggggaaattctgatttgaagagagagaaagtgagtagagaaatgattataatattgatacttttggtgatatgaatagatgaattaatgat 25768  T
Q  114 gacttattgatcgtaaggatgtaagtatttgataatgcaattgttgtaaataacataattcagggtgattgttatgttaatgtctatgaggtgaattatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25769 gacttattgatcgtaaggatgtaagtatttgataatgcaattgttgtgaataacataattcggggtgattgttatgttaatgtctatgaggtgaattatg 25868  T
Q  214 cattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttctgcagag 313  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25869 cattttcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttttgcagag 25968  T
Q  314 catagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacata 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25969 catagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacata 26068  T
Q  414 gcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtgacttttagtgatttttgtgaatatttgaacc 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26069 gcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtgacatttagtgatttttgtgaatatttgaacc 26168  T
Q  514 agactctaattgtatacattatttg 538  Q
    |||||||||||||||||||||||||    
T  26169 agactctaattgtatacattatttg 26193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 497; Significance: 0; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 14 - 538
Target Start/End: Original strand, 16436039 - 16436563
Alignment:
Q  14 cagagaggaggggaaattctgatttgaagagagagaaagtgagtagagaaatgattatcatgttgatacttttggtgatatgaatagatgaattaatgat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  16436039 cagagaggaggggaaattctgatttgaagagagagaaagtgagtagagaaatgattataatattgatacttttggtgatatgaatagatgaattaatgat 16436138  T
Q  114 gacttattgatcgtaaggatgtaagtatttgataatgcaattgttgtaaataacataattcagggtgattgttatgttaatgtctatgaggtgaattatg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16436139 gacttattgatcgtaaggatgtaagtatttgataatgcaattgttgtgaataacataattcggggtgattgttatgttaatgtctatgaggtgaattatg 16436238  T
Q  214 cattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttctgcagag 313  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16436239 cattttcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttttgcagag 16436338  T
Q  314 catagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacata 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16436339 catagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacata 16436438  T
Q  414 gcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtgacttttagtgatttttgtgaatatttgaacc 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16436439 gcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtgacatttagtgatttttgtgaatatttgaacc 16436538  T
Q  514 agactctaattgtatacattatttg 538  Q
    |||||||||||||||||||||||||    
T  16436539 agactctaattgtatacattatttg 16436563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 100 - 512
Target Start/End: Original strand, 3171903 - 3172316
Alignment:
Q  100 gatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-taaataacataattcagggtgattgttatgttaatgtct 198  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||||||| | ||| ||||||||   || |||| ||||||||| ||||    
T  3171903 gatgaattaatgatgacttgttgattgtatggatgtaagtatttgataattcaattgttggtgaatgacataattggtggagattattatgttaacgtct 3172002  T
Q  199 atgaggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaa-tgcggggtgtttatta 297  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| | ||||||||||||||    
T  3172003 atgaggtgatttatgcattgtcgagtccttacttgaagcccatgcattcatagtcataa-tgaggtgatttgaagtatgtaaaattcggggtgtttatta 3172101  T
Q  298 catagcttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctag 397  Q
    |||||| |||||| | |||| ||| |||||| |||||||| |||  ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  3172102 catagcatctgcaaaacataaatgtggggtgtttattatgttggttgattcattaacggtaaaattatctccggaatcctatggtaccacatgcatctag 3172201  T
Q  398 aagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtgacttttagtgatttt 497  Q
    |||||| || ||||| |||||||||||||||||  ||||| ||||| |||||||||||||||||  || |||||||||||||||||||||| ||||||||    
T  3172202 aagagtttaaaacattgcatgcatttatctattcatgagttgagtcgtacttgattatgtgaatttgtatatatgtgcattggtgacttttggtgatttt 3172301  T
Q  498 tgtgaatatttgaac 512  Q
    |||||||| ||||||    
T  3172302 tgtgaatacttgaac 3172316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 112 - 481
Target Start/End: Original strand, 9128655 - 9129026
Alignment:
Q  112 atgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-taaataacataattcaggg-tgattgttatgttaatgtctatgaggtgaat 209  Q
    ||||||| | ||| ||| |||||||||||||||||||||||||||||| | | |||||||| |  ||| ||||| ||||||||||||||||| ||||| |    
T  9128655 atgacttgtcgattgtatggatgtaagtatttgataatgcaattgttggtgagtaacataaatgtgggctgattattatgttaatgtctatggggtgatt 9128754  T
Q  210 tatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgat-ttgaagtatgtaaatgcggggtgtttattacatagcttctg 308  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||  |||| |||| ||||||||| ||||||||||||| |||||||||||||||||    
T  9128755 tatgcattgtcaagtccttatttgaagtccatgcattcatagtcata--tgaggtgatcttgaagtatataaatgcggggtgattattacatagcttctg 9128852  T
Q  309 cagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctaga 408  Q
    ||||||||| |||  |||||||||||||||||| ||||||||||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||||    
T  9128853 cagagcataaatgtagggtgattattatgctggtggattcattaacggtaaaattatctccagaatccaatggtaccacatgcatctagaagagtctaga 9128952  T
Q  409 acatagcatgcatttatcta-ttggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggt 481  Q
    |||| | ||||||||   || ||||||||||| ||| || |||| ||||||| | |||| || |||||||||||    
T  9128953 acattgtatgcatttgaatatttggtgagtcgtgtcataattgaatatgtgacttggtgaatttgtgcattggt 9129026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 64 - 297
Target Start/End: Original strand, 20911716 - 20911951
Alignment:
Q  64 atgattatcatgttgatacttttggtgat-atgaatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-ta 161  Q
    |||||||| |||||||| ||||| ||||| || || |||||| ||||||||||||| ||||| ||| ||| |||||||||||||||||||||||||| |     
T  20911716 atgattatgatgttgattcttttagtgattataaagagatgatttaatgatgacttgttgattgtatggaagtaagtatttgataatgcaattgttggtg 20911815  T
Q  162 aataacataattcag-ggtgattgttatgttaatgtctatga-ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaat 259  Q
    |||||||||| |  | ||||||  ||||| |||||||||||  |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||  ||    
T  20911816 aataacataaatgcgaggtgataattatgctaatgtctatggtggtgaattgtgcattgtctagttcttacttgaagtccatgcattcatagtcat--at 20911913  T
Q  260 gagttgatttgaagtatgtaaatgcggggtgtttatta 297  Q
    ||| ||||||||||||||||| || |||||||||||||    
T  20911914 gaggtgatttgaagtatgtaagtgtggggtgtttatta 20911951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 323 - 536
Target Start/End: Original strand, 20911939 - 20912152
Alignment:
Q  323 ggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatt 422  Q
    |||||| ||||||||  || ||||||| |||||||| |||||||||||||||||| |  ||||||||||||||||| ||| ||||||||| |||||| ||    
T  20911939 ggggtgtttattatgtcggtggattcagtaacggtataattatctctggaatcctcttgtaccacatgcatctagaggagactagaacattgcatgcctt 20912038  T
Q  423 tatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtgacttttagtgatttttgtgaatatttgaaccagactctaa 522  Q
    |    ||||| |||||||||| |||||||||  |||||| ||| ||||||||||||| ||   |||  ||||   |||||||||||||||||| | | ||    
T  20912039 ttataattggagagtcgagtcgtacttgatttcgtgaattggtttatatgtgcattgatggactttgttgatggctgtgaatatttgaaccaggccccaa 20912138  T
Q  523 ttgtatacattatt 536  Q
    |||||||| |||||    
T  20912139 ttgtataccttatt 20912152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 356 - 512
Target Start/End: Original strand, 8325422 - 8325579
Alignment:
Q  356 gtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgattat 455  Q
    ||||||||||||  ||| |||||||  |||||||||||||||| ||||||||||||| |||| |||||||  |||    ||||||||| ||||||| |||    
T  8325422 gtaaaattatcttcggactcctatggcaccacatgcatctagatgagtctagaacattgcatacatttattgattaactagtcgagtcatacttgaatat 8325521  T
Q  456 gtgaatcggtgtatatgtgcattggtg-acttttagtgatttttgtgaatatttgaac 512  Q
    ||||||||||||||||||||||||||| | |||| |||||| | ||||||| ||||||    
T  8325522 gtgaatcggtgtatatgtgcattggtgaatttttggtgattgtcgtgaatacttgaac 8325579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 203 - 409
Target Start/End: Complemental strand, 16195865 - 16195661
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatag 302  Q
    ||||| ||||||| ||||||||||||||||||| | |||||||||||||||||   | |||||||||| || |||||| |  | | ||||||||||||||    
T  16195865 ggtgagttatgcaatgtcgagtccttacttgaacttcatgcattcatagtcattt-taagttgatttggagaatgtaa-tcagtgatgtttattacatag 16195768  T
Q  303 cttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatccta-tgataccacatgcatctagaaga 401  Q
    |||||||| | | ||  || | | || |||||||| ||   |||||||||||||||||||||||   ||||||||| || ||||||||||||||||| ||    
T  16195767 cttctgcataacctaattg-gtgatgtttattatgttgacagattcattaacggtaaaattatcgtcggaatcctaatggtaccacatgcatctagatga 16195669  T
Q  402 gtctagaa 409  Q
    ||||||||    
T  16195668 gtctagaa 16195661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 353 - 504
Target Start/End: Original strand, 15755901 - 15756054
Alignment:
Q  353 acggtaaaattatctctggaatccta-tgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttga 451  Q
    ||||||||||||||||  ||||  || || ||||||||| || |||||||||||||||||| ||| ||| || |  |||| ||| ||||||| |||||||    
T  15755901 acggtaaaattatctccagaattttaatggtaccacatgtatatagaagagtctagaacattgcaagcaattgttaattgatgaatcgagtcatacttga 15756000  T
Q  452 ttatgtgaatcggtgtatatgtgcattggtgact-tttagtgatttttgtgaat 504  Q
     ||||  |||| |||||||||||||||||||| | ||| |||||| ||||||||    
T  15756001 atatgcaaatcagtgtatatgtgcattggtgaatgtttggtgattgttgtgaat 15756054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 466
Target Start/End: Complemental strand, 26427188 - 26427076
Alignment:
Q  355 ggtaaaattatctctggaatcctat-gataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgatt 453  Q
    |||||||||||||  ||||||| || | |||||| ||||| |||||||||||||||||| ||||||| ||    | |||||||||| ||| ||||||| |    
T  26427188 ggtaaaattatcttcggaatccaattggtaccacgtgcatttagaagagtctagaacattgcatgcacttgataactggtgagtcgtgtcatacttgact 26427089  T
Q  454 atgtgaatcggtg 466  Q
    |||||||| ||||    
T  26427088 atgtgaattggtg 26427076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 422
Target Start/End: Original strand, 17151034 - 17151105
Alignment:
Q  352 aacggtaaaattatctctggaatcctat-gataccacatgcatctagaagagtctagaacatagcatgcatt 422  Q
    |||||| |||||||||| ||||||| || | ||||||||||||||| ||||||||| ||||| |||||||||    
T  17151034 aacggttaaattatctccggaatccaattggtaccacatgcatctaaaagagtctaaaacattgcatgcatt 17151105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 6210574 - 6210615
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||| ||||||||||||||||||||||||| ||||||||||    
T  6210574 taccatatgcatctagaagagtctagaacattgcatgcattt 6210615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 11622031 - 11622084
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttg-aagtccatgcattcatagtcat 255  Q
    ||||||||||||||||||||||| ||||||| || | |||||||||||||||||    
T  11622031 ggtgaattatgcattgtcgagtctttacttgaaaattcatgcattcatagtcat 11622084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 12246515 - 12246474
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  12246515 taccgcatgcatctagaagagtctagaacattgcatgcattt 12246474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 203 - 423
Target Start/End: Complemental strand, 13488014 - 13487797
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatag 302  Q
    ||||| || |||||||||||||| ||||||||||| |||||| ||||||||||   |||| || ||||||| |||| | || | |||||||  ||||| |    
T  13488014 ggtgagttgtgcattgtcgagtctttacttgaagttcatgcaatcatagtcat-gttgaggtgttttgaagaatgtcattg-gtggtgtttgatacattg 13487917  T
Q  303 cttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatccta-tgataccacatgcatctagaaga 401  Q
    |||| ||||| | |  ||  | |||| |||||||| | | | ||||| | | |||||||||||||| ||| ||| | || |||||||||||| ||||||     
T  13487916 cttcagcagaacgt-tattggtggtgtttattatgttcgtgcattcaat-atggtaaaattatctccggagtccaattggtaccacatgcatgtagaagt 13487819  T
Q  402 gtctagaacatagcatgcattt 423  Q
    ||||||||||| ||||||||||    
T  13487818 gtctagaacattgcatgcattt 13487797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 14252963 - 14253004
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  14252963 taccgcatgcatctagaagagtctagaacattgcatgcattt 14253004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 14278127 - 14278168
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||| |||||||||||||||||| ||||||||||    
T  14278127 taccacatgcatttagaagagtctagaacattgcatgcattt 14278168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 26427340 - 26427287
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcata 256  Q
    ||||| || |||||||||||||| |||||| ||||| |||||||||||||||||    
T  26427340 ggtgatttgtgcattgtcgagtctttacttaaagtctatgcattcatagtcata 26427287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 39293370 - 39293411
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  39293370 taccgcatgcatctagaagagtctagaacattgcatgcattt 39293411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 45148124 - 45148083
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  45148124 taccgcatgcatctagaagagtctagaacattgcatgcattt 45148083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 423
Target Start/End: Complemental strand, 13460883 - 13460840
Alignment:
Q  380 gataccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||| |||||||||||||||||||||||||| |||| |||||    
T  13460883 gataccgcatgcatctagaagagtctagaacattgcatacattt 13460840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 14974189 - 14974230
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||||||||| |||||||||||| ||| ||||||    
T  14974189 taccacatgcatctagaatagtctagaacattgcaagcattt 14974230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 15403665 - 15403706
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||||||||| |||||||||||| ||| ||||||    
T  15403665 taccacatgcatctagaatagtctagaacattgcaagcattt 15403706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 16065098 - 16065057
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||||||||||| |||||||||| ||||| ||||    
T  16065098 taccacatgcatctagaagattctagaacattgcatgaattt 16065057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 19066155 - 19066114
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||| ||||    
T  19066155 taccgcatgcatctagaagagtctagaacattgcatgtattt 19066114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 21500896 - 21500933
Alignment:
Q  213 gcattgtcgagtccttacttgaagtccatgcattcata 250  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  21500896 gcattgtcgagtccatacttgaagtccatgtattcata 21500933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 33291399 - 33291448
Alignment:
Q  207 aattatgcattgtcgagtccttacttga-agtccatgcattcatagtcat 255  Q
    ||||||||||||||||||| |||| ||| |||| ||||||||||||||||    
T  33291399 aattatgcattgtcgagtctttacgtgatagtcgatgcattcatagtcat 33291448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 44306900 - 44306941
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||| ||||||||||||||| || ||||||||||    
T  44306900 taccacatgcatgtagaagagtctagaatattgcatgcattt 44306941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 525
Target Start/End: Original strand, 9129044 - 9129120
Alignment:
Q  449 tgattatgtgaatcggtgtatatgtgcattggtgacttttagtgatttttgtgaatatttgaaccagactctaattg 525  Q
    ||||||||| ||| ||| ||||||||||||||||  ||||  ||||  ||||||||| ||||| ||| |||||||||    
T  9129044 tgattatgtaaattggtatatatgtgcattggtggattttgttgatggttgtgaataattgaagcaggctctaattg 9129120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 11227664 - 11227624
Alignment:
Q  209 ttatgcattgtcgagtccttacttgaagtccatgcattcat 249  Q
    ||||||||||||||||   ||||||||||||||||||||||    
T  11227664 ttatgcattgtcgagtttatacttgaagtccatgcattcat 11227624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 16093547 - 16093507
Alignment:
Q  209 ttatgcattgtcgagtccttacttgaagtccatgcattcat 249  Q
    ||||||||| ||||||| ||||||||||| |||||||||||    
T  16093547 ttatgcattatcgagtctttacttgaagttcatgcattcat 16093507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 16175342 - 16175298
Alignment:
Q  212 tgcattgtcgagtccttacttg-aagtccatgcattcatagtcat 255  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||    
T  16175342 tgcattgtcgagtctttacttggaagttcatgcattcatagtcat 16175298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 64 - 512
Target Start/End: Complemental strand, 13438916 - 13438463
Alignment:
Q  64 atgattatcatgttgatacttttggtgat-atgaatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-ta 161  Q
    |||||||| |||||  | ||||||| ||| || ||||||||| ||||| |||||||||||||  || ||||||||||||||||||||| |||||||| |     
T  13438916 atgattatgatgttatttcttttggcgattataaatagatgatttaataatgacttattgattttatggatgtaagtatttgataatgtaattgttggtg 13438817  T
Q  162 aataacataattcagggt-gattgttatgttaatgtctatga-ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaat 259  Q
    |||||||||| |  |||| |||| |||||||||||||||||  |||||||||| ||||||  |||||||||||||||||||||||||||||||||||  |    
T  13438816 aataacataaatgtgggttgattattatgttaatgtctatggtggtgaattattcattgtttagtccttacttgaagtccatgcattcatagtcata--t 13438719  T
Q  260 gagttgat-ttgaagtatgtaaatgcggggtgtttattacatagcttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggta 358  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| |||||  |||| |||| ||||||||||||| | |   ||||||| |||||||    
T  13438718 gagttgatcttgaagtatgtaaatgcggggtgattattacatagcttatgcaggacataaatgcagggtgattattattccgattgattcatcaacggta 13438619  T
Q  359 aaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcat--ttatctattggtgagtcgagtcttacttgattatg 456  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||  ||||   ||||  ||||||||| |||||||||| |    
T  13438618 aaattatctctggaatcctatggtaccacatgcatctagaagagtctagaacattgcatgcatatttattatttgggtagtcgagtcgtacttgattacg 13438519  T
Q  457 tgaatcggtgtatatgtgcattggtgacttttagtgatttttgtgaatatttgaac 512  Q
    ||||| |||||||| ||||||||||||  ||| ||||   ||||||||| ||||||    
T  13438518 tgaattggtgtatacgtgcattggtgaaatttggtgaccgttgtgaatacttgaac 13438463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 100 - 511
Target Start/End: Complemental strand, 10725295 - 10724893
Alignment:
Q  100 gatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaa-ttgttg-taaataacataattcagggtgattgttatgttaatgtc 197  Q
    ||||||||||||||||||| ||||| ||| ||||| |||||||||||||||||| |||||| | ||||||||||||   ||||||| |||||||||||||    
T  10725295 gatgaattaatgatgacttgttgattgtatggatggaagtatttgataatgcaaattgttggtgaataacataattggtggtgatttttatgttaatgtc 10725196  T
Q  198 tatga-ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttatt 296  Q
    ||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||  | | || |||||||| ||| |||||||||||      
T  10725195 tatggtggtgagttatgcattgtcgagtccttacttgaagtccatgcattcatagtcat-aatgaagtaagtttaagtatgtgaattcggggtgttta-- 10725099  T
Q  297 acatagcttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatcta 396  Q
            |||||||| |||| ||  | |||| |||||||| | | |||||| ||||||   ||||||||| || ||||||||| || || |||||||||    
T  10725098 --------tctgcagaacata-attggtggtgtttattatgttagtggattcgttaacgaagaaattatctttgaaatcctatggtatcaaatgcatcta 10725008  T
Q  397 gaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtgacttttagtgattt 496  Q
    || |||||||||| || ||||| |||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| |||| ||||||     
T  10725007 gatgagtctagaatattgcatgaatttatctattggtgagtcgagtcgtacttgattacgtgaatctgtgtatatgtgcattggtgaattttggtgattg 10724908  T
Q  497 ttgtgaatatttgaa 511  Q
    ||| ||||| |||||    
T  10724907 ttgcgaatacttgaa 10724893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 109 - 417
Target Start/End: Original strand, 12254141 - 12254451
Alignment:
Q  109 atgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-taaataacataatt-cagggtgattgttatgttaatgtct-atga-gg 204  Q
    |||||||||| ||||| ||| | ||||||| ||||||||||| |||||||| | |||||||||| | | ||||||||   |||||||||| | |||  ||    
T  12254141 atgatgacttgttgattgtatgaatgtaagaatttgataatgaaattgttggtgaataacataaatgcggggtgattaccatgttaatgttttatggtgg 12254240  T
Q  205 tgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgat-ttgaagtatgtaaatgcggggtgtttattacatagc 303  Q
    | |||||||||||||||| |||||||||||| | ||||||||||||||||||  |||| |||| ||||||||||||| ||||||||| ||||||||||||    
T  12254241 ttaattatgcattgtcgattccttacttgaaattcatgcattcatagtcata--tgaggtgatcttgaagtatgtaactgcggggtgattattacatagc 12254338  T
Q  304 ttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagt 403  Q
    || |||||  |||| |||||||||| ||||||||  || ||||  || ||||||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  12254339 ttatgcaggacataaatgcggggtggttattatgtcggtggatgtat-aacggtaaaattatctccggaatcctatggtaccacatgcatttagaagagt 12254437  T
Q  404 ctagaacatagcat 417  Q
    ||||||||| ||||    
T  12254438 ctagaacattgcat 12254451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 109 - 483
Target Start/End: Complemental strand, 8023069 - 8022692
Alignment:
Q  109 atgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-taaataacataattcagggt-gattgttatgttaatgtctatgaggt- 205  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||||| | |||||||||| |  |||| |||| |||||||| ||| | ||| ||     
T  8023069 atgatgacttgttgattgtatggatgtaagtatttgataatgcaattgttggtgaataacataaatgcgggttgattattatgtta-tgtatgtgaagtt 8022971  T
Q  206 gaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaa--atgcggggtgtttattacatagc 303  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||   |||| |||||||||||||||||  || |||| ||   ||||||||||    
T  8022970 gaattgtgcattgtcgagtccctacttgaagtccatgcattcatagtcat--gtgaggtgatttgaagtatgtaattatacgggttgacaattacatagc 8022873  T
Q  304 ttctgcagagcatagatgcggggtg-attattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagag 402  Q
    || ||||   |||| ||||| | || |||||||||   |  |||||||||||| |||||||||||| ||||||| ||| ||||||||||||||||||||     
T  8022872 ttttgcatgacataaatgcgagttgaattattatgtctgttgattcattaacgataaaattatctccggaatccaatggtaccacatgcatctagaagat 8022773  T
Q  403 tctagaacatagcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtga 483  Q
    |||||||||| ||||| ||| ||   ||||||||||   || || |||| ||||||| | |||| || |||||||||||||    
T  8022772 tctagaacattgcatgaattcattatttggtgagtcatatcataattgaatatgtgactaggtgaatttgtgcattggtga 8022692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 346 - 511
Target Start/End: Original strand, 8853513 - 8853679
Alignment:
Q  346 ttcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtctt 445  Q
    |||||||||||||||||||||||  |||||||||| || ||||| |||||||| ||||||||||||| |||||||||||   |||||||||||||||| |    
T  8853513 ttcattaacggtaaaattatctccagaatcctatggtatcacatacatctagatgagtctagaacattgcatgcatttaataattggtgagtcgagtcat 8853612  T
Q  446 acttgattatgtgaatcggtgtatatgtgcattggtg-acttttagtgatttttgtgaatatttgaa 511  Q
    |||||| |||||||||||||||||||||||||||||| |||||| |||||| ||||||||| |||||    
T  8853613 acttgaatatgtgaatcggtgtatatgtgcattggtgaacttttggtgattgttgtgaatacttgaa 8853679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 204 - 483
Target Start/End: Original strand, 19633259 - 19633536
Alignment:
Q  204 gtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtca-taaatgagttgatttgaagtatgtaaatgcggggtgtttattacatag 302  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||| | || ||    |||| ||| |||||| || | | ||||||||||||||    
T  19633259 gtgagttatgcattgtcgagtccttacttgaagtcaatgcattcatagtcacttaaggaa---attttaagaatgtaattg-gtgatgtttattacatag 19633354  T
Q  303 cttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcct-atgataccacatgcatctagaaga 401  Q
    ||||||||||  |||  || | | |  |||||||| ||| |||||||||||||||||||||||||| |||||||| ||| | | || |||||||||| ||    
T  19633355 cttctgcagaatataattg-gtgatatttattatgttggtggattcattaacggtaaaattatctccggaatcctaatggtgcgacgtgcatctagatga 19633453  T
Q  402 gtctagaacatagcatgcat-ttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtga 483  Q
    ||||||||||| |||||||| | ||  ||||||||||||||||  ||||   ||||||||| |||||||||||||||||||||    
T  19633454 gtctagaacattgcatgcatatgattcattggtgagtcgagtcaaactttgatatgtgaattggtgtatatgtgcattggtga 19633536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 212 - 483
Target Start/End: Complemental strand, 6809124 - 6808853
Alignment:
Q  212 tgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttctgcag 311  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||   ||| || ||||||| |||||| || | | |||||||||||||||||||||||    
T  6809124 tgcattgtcgagtctttacgtgaattccatgcattcatagtcatattcgaggtgttttgaagaatgtaattg-gtgatgtttattacatagcttctgcag 6809026  T
Q  312 agcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctat-gataccacatgcatctagaagagtctagaac 410  Q
    | |||| ||| | | || |||||||| ||| ||||| | || |||||||||| ||||  |||||| || |||||||||||||||||||||||||||||||    
T  6809025 aacata-atgggtgatgtttattatgttggtggatttaata-cggtaaaattttctcaagaatccaattgataccacatgcatctagaagagtctagaac 6808928  T
Q  411 atagcatgcatttatctattggtgagtc--gagtcttacttgattatgtgaatcggtgtatatgtgcattggtga 483  Q
    || ||||||| ||    |||||||||||  | ||| || ||||||||||||||| |||  |||||||||||||||    
T  6808927 attgcatgcacttgataattggtgagtcgtgtgtcatatttgattatgtgaatcagtgattatgtgcattggtga 6808853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 334 - 505
Target Start/End: Original strand, 16220307 - 16220479
Alignment:
Q  334 tatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggt 433  Q
    |||| ||| |||||||||||| |||||||||||||   ||||| ||| |||||||||||||||||  |||||| ||||| |||||||||||   ||||||    
T  16220307 tatgttggtggattcattaacagtaaaattatctccataatcccatggtaccacatgcatctagataagtctaaaacattgcatgcatttaataattggt 16220406  T
Q  434 gagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtg-acttttagtgatttttgtgaata 505  Q
    |||||||||  ||||||  |||||||||| ||||||| ||||||||||| |||| | |||||| |||||||||    
T  16220407 gagtcgagtaatacttggatatgtgaatcagtgtataagtgcattggtgaacttctggtgattgttgtgaata 16220479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 109 - 423
Target Start/End: Original strand, 2547791 - 2548105
Alignment:
Q  109 atgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-taaataacataattcagggtgattgttatgttaatgtctatgaggtga 207  Q
    |||||||||| ||||| ||| |||||||| ||||||||||| ||| | ||| | || || |||||||  | ||||| |||||||||| |   |  |||||    
T  2547791 atgatgacttgttgattgtatggatgtaaatatttgataatacaaatattggtgaaaaatataattcgtgatgattattatgttaatatagttt-ggtga 2547889  T
Q  208 attatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttct 307  Q
     || | ||||||| |||||||||||||||| |||||||||||| |||||  |||| |||||||||| |  ||| || | | |||||||||||||| ||||    
T  2547890 gttgttcattgtcaagtccttacttgaagttcatgcattcataatcatat-tgaggtgatttgaagaacataattg-gtgatgtttattacatagtttct 2547987  T
Q  308 gcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcct-atgataccacatgcatct--agaagagtc 404  Q
    ||| | ||||  || | | || |||||||| ||| | |||||||||||||||||||||||  |||||||| ||| ||||||||||||||  ||||||||     
T  2547988 gcaaaacataattg-gtgatgtttattatgttggtgtattcattaacggtaaaattatcttcggaatcctaatggtaccacatgcatctagagaagagta 2548086  T
Q  405 tagaacatagcatgcattt 423  Q
    |||||||| |||| |||||    
T  2548087 tagaacattgcatacattt 2548105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 16220071 - 16220167
Alignment:
Q  64 atgattatcatgttgatacttttggtgat-atgaatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg 159  Q
    |||||||| ||| ||||  |||||||||| || ||| ||||||||||||||||||||||||| ||| | |||||||||||| ||||| ||| |||||    
T  16220071 atgattatgatgatgattattttggtgattataaattgatgaattaatgatgacttattgattgtatgaatgtaagtattttataattcaaatgttg 16220167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 526
Target Start/End: Complemental strand, 8022675 - 8022598
Alignment:
Q  449 tgattatgtgaatcggtgtatatgtgcattggtgacttttagtgatttttgtgaatatttgaaccagactctaattgt 526  Q
    ||||||||||||| ||||||||||||| ||||||  ||||  | ||  ||||||||||||||| ||||||||||||||    
T  8022675 tgattatgtgaattggtgtatatgtgcgttggtggattttgtttatggttgtgaatatttgaatcagactctaattgt 8022598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 11401120 - 11401079
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  11401120 taccacatgcatctagaagagtctagaacattgcatgcattt 11401079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 17385392 - 17385351
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  17385392 taccacatgcatctagaagagtctagaacattgcatgcattt 17385351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 54040207 - 54040248
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  54040207 taccacatgcatctagaagagtctagaacattgcatgcattt 54040248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 54049494 - 54049535
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  54049494 taccacatgcatctagaagagtctagaacattgcatgcattt 54049535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 17385559 - 17385507
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcat 255  Q
    ||||| || |||||||||||||| |||||| ||||||||||||||||||||||    
T  17385559 ggtgacttgtgcattgtcgagtctttactttaagtccatgcattcatagtcat 17385507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 420
Target Start/End: Original strand, 21094218 - 21094286
Alignment:
Q  353 acggtaaaattatctctggaatcctat-gataccacatgcatctagaagagtctagaacatagcatgca 420  Q
    |||||||||||||||| ||||||| || | |||||||||||| |||||| ||||||||||| |||||||    
T  21094218 acggtaaaattatctccggaatccaattggtaccacatgcatgtagaagtgtctagaacattgcatgca 21094286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 479
Target Start/End: Original strand, 25486942 - 25487131
Alignment:
Q  289 tgtttattacatagcttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctat-gataccac 387  Q
    |||||||||||||||||||||||| | ||  || | | || |||||| | ||| ||||||| || ||| ||||||||||||  ||||| || | ||||||    
T  25486942 tgtttattacatagcttctgcagaacgtaattg-gtgatgtttattacgttggtggattcaata-cggcaaaattatctctataatccaattggtaccac 25487039  T
Q  388 atgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattg 479  Q
    |||||| ||||| ||||||||||||  |||||| ||    |||||| | ||| ||| ||||||| ||||||||| ||||  |||||||||||    
T  25487040 atgcatttagaatagtctagaacattacatgcacttgataattggttattcgtgtcatacttgactatgtgaattggtgattatgtgcattg 25487131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 424
Target Start/End: Original strand, 31413910 - 31413952
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattta 424  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  31413910 taccgcatgcatctagaagagtctagaacattgcatgcattta 31413952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 15551127 - 15551168
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  15551127 taccgcatgcatctagaagagtctagaacattgcatgcattt 15551168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 17391881 - 17391840
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  17391881 taccacatgcatctagaagagtcttgaacattgcatgcattt 17391840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 420
Target Start/End: Original strand, 19978361 - 19978429
Alignment:
Q  353 acggtaaaattatctctggaatcc-tatgataccacatgcatctagaagagtctagaacatagcatgca 420  Q
    |||||||||||||||| | ||||| | || |||||||||||||||| ||||||||||| || |||||||    
T  19978361 acggtaaaattatctccgcaatccatttggtaccacatgcatctaggagagtctagaatattgcatgca 19978429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 423
Target Start/End: Complemental strand, 8603209 - 8603174
Alignment:
Q  388 atgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||||||||||||||||| ||||||||||    
T  8603209 atgcatctagaagagtctagaacattgcatgcattt 8603174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 412
Target Start/End: Complemental strand, 21765337 - 21765307
Alignment:
Q  382 taccacatgcatctagaagagtctagaacat 412  Q
    |||||||||||||||||||||||||||||||    
T  21765337 taccacatgcatctagaagagtctagaacat 21765307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 25606936 - 25606974
Alignment:
Q  384 ccacatgcatctagaagagtctagaacatagcatgcatt 422  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  25606936 ccacatgcatctagaggagtctagaacattgcatgcatt 25606974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 439
Target Start/End: Complemental strand, 27050309 - 27050223
Alignment:
Q  353 acggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcg 439  Q
    ||||||| ||||| |  ||||||| ||| ||| |||||||||||||| ||| |||||||| |||||||||| |   |||||||||||    
T  27050309 acggtaagattattttcggaatccaatggtactacatgcatctagaatagtatagaacattgcatgcatttgttagttggtgagtcg 27050223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 9637725 - 9637766
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||| |||||||||||||||||||  |||||||||    
T  9637725 taccacatgcagctagaagagtctagaacattacatgcattt 9637766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 10711464 - 10711509
Alignment:
Q  212 tgcattgtcgagtccttacttg-aagtccatgcattcatagtcata 256  Q
    |||||||||||||| ||||||| |||||||||||||||| ||||||    
T  10711464 tgcattgtcgagtctttacttgaaagtccatgcattcattgtcata 10711509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 17760066 - 17760107
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||| ||||||||||||||||| ||||||||||    
T  17760066 taccgcatgcatcaagaagagtctagaacattgcatgcattt 17760107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 19061386 - 19061427
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||| ||||||||||||||||| ||||||||||    
T  19061386 taccgcatgcatcaagaagagtctagaacattgcatgcattt 19061427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 25105584 - 25105625
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||    
T  25105584 taccacatgcacctagaggagtctagaacattgcatgcattt 25105625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 1e-85; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 130 - 537
Target Start/End: Original strand, 21198989 - 21199387
Alignment:
Q  130 ggatgtaagtatttgataatgcaattgttg-taaataacataattcagggtgattgttatgttaatgtctatgaggtgaattatgcattgtcgagtcctt 228  Q
    |||||||||||||||||||||||||||||| | |||||||||| |  ||| |||| ||||||||||||||  | |||||| |||||||||||||||||||    
T  21198989 ggatgtaagtatttgataatgcaattgttggtgaataacataaatgcgggggattattatgttaatgtcttggtggtgaaatatgcattgtcgagtcctt 21199088  T
Q  229 acttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttctgcagagcatagatgcggggtg 328  Q
    ||||||||| |||| ||||||||||||  ||||||| ||||||||||||||||||||| ||| |||||||||||||| |||||   ||| |||  |||||    
T  21199089 acttgaagttcatgtattcatagtcat--atgagttaatttgaagtatgtaaatgcggagtgattattacatagcttatgcaggatataaatgtcgggtg 21199186  T
Q  329 attattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatcta 428  Q
    ||| || ||  || ||||||||||||||||||||||||||  ||||  || | ||||||||||||||||| ||||||||||||| |||||||||||        
T  21199187 attgttttgtcggtggattcattaacggtaaaattatctccagaatggtagggtaccacatgcatctagacgagtctagaacattgcatgcatttaatat 21199286  T
Q  429 ttggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtgacttttagtgatttttgtgaatatttgaaccagactctaattgtat 528  Q
    |||||||||||||||        ||||||||||| |||||||||||||||||||   |||  ||||  || |||||||||||| |||||||||| |||||    
T  21199287 ttggtgagtcgagtc--------ttatgtgaatcagtgtatatgtgcattggtggactttgttgatggttttgaatatttgaatcagactctaaatgtat 21199378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 20252739 - 20252698
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  20252739 taccgcatgcatctagaagagtctagaacattgcatgcattt 20252698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 33395881 - 33395840
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  33395881 taccgcatgcatctagaagagtctagaacattgcatgcattt 33395840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 3e-74; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 96 - 483
Target Start/End: Complemental strand, 24623636 - 24623250
Alignment:
Q  96 aatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-taaataacataattcagggtgattgttatgttaat 194  Q
    |||| ||||||| |||||||||| ||| | ||| |||||||||||||||||||||||| ||||| | ||||||||||||   ||||||| ||||||||||    
T  24623636 aataaatgaattgatgatgacttgttgtttgtatggatgtaagtatttgataatgcaactgttggtgaataacataattggtggtgattattatgttaat 24623537  T
Q  195 gtctatga-ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgttt 293  Q
    || || |  ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| | |||| |||||||||| |||||| || | |||||||    
T  24623536 gtttacgttggtgagttatgcattgtcgagtccttacttgaagtccttgcattcatagtcat-attgaggtgatttgaagaatgtaattg-gtggtgttt 24623439  T
Q  294 attacatagcttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcat 393  Q
    |||||||||||||| |||| |||| ||  | | |  |||||||| | | ||||||||||| |||||||||||||| ||||||| ||| ||||||||||||    
T  24623438 attacatagcttctacagaacata-attggtgatatttattatgttagtggattcattaagggtaaaattatctccggaatccaatggtaccacatgcat 24623340  T
Q  394 ctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtga 483  Q
    |||||||||| |||||||| ||||||||||||   ||||||||||  ||| || |||| ||||||| | |||| || |||||||| ||||    
T  24623339 ctagaagagtttagaacattgcatgcatttattatttggtgagtcatgtcataattgaatatgtgacttggtgaatctgtgcatttgtga 24623250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 115 - 477
Target Start/End: Complemental strand, 25262161 - 25261800
Alignment:
Q  115 acttattgatcgtaaggatgtaagtatttgataatgcaattgttgtaaataacataattcagggtgattgttatgttaatgtctatga-ggtgaattatg 213  Q
    |||||||||| ||| ||||||||||||||||||||| || |||||   | |||||||||   | | ||| |||||||||| | ||||  ||||| |||||    
T  25262161 acttattgattgtatggatgtaagtatttgataatgtaaatgttggtgaaaacataattggtgattattattatgttaatatatatgttggtgagttatg 25262062  T
Q  214 cattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttctgcagag 313  Q
    |||| |||||||||||||||||||||||||||||||||||||   |||| |||||||||| |||||| |  | | | |||| ||| ||| |||||||||     
T  25262061 cattatcgagtccttacttgaagtccatgcattcatagtcattt-tgaggtgatttgaagaatgtaatta-gtgatatttaatacttagtttctgcagaa 25261964  T
Q  314 catagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctat-gataccacatgcatctagaagagtctagaacat 412  Q
    ||||  || | | || |||||||| ||| ||||||||||| |||||||| |||| |  |||||||| | |||||||||||||||||||||||||||||||    
T  25261963 cataattg-gtgatgtttattatgttggtggattcattaatggtaaaatcatctttcaaatcctattggtaccacatgcatctagaagagtctagaacat 25261865  T
Q  413 agcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcat 477  Q
      |||||| || |  |||||||||||| ||| |||||   ||||||||| |||||||| ||||||    
T  25261864 tacatgcacttgttaattggtgagtcgtgtcatactttgatatgtgaattggtgtatacgtgcat 25261800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 293 - 512
Target Start/End: Original strand, 23543734 - 23543955
Alignment:
Q  293 tattacatagcttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgca 392  Q
    ||||||||| ||||| ||   |||| ||||||| || ||||||||   | ||||||||||||||| |||||||||| | ||||||||| || ||||||||    
T  23543734 tattacataacttctacaagacataaatgcgggttggttattatgtccgtggattcattaacggtcaaattatctccgaaatcctatggtatcacatgca 23543833  T
Q  393 tctagaagagtctagaacatagcatgcatttatctattggtgagtcgagt-cttacttgattatgtgaatcggtgtatatgtgcattggtg-acttttag 490  Q
    |||||||||||||||||||| ||||||| ||||  ||||||||||||||| |||| |||| ||||||||||||||||||||||||||| || |||||| |    
T  23543834 tctagaagagtctagaacattgcatgcacttattaattggtgagtcgagtccttatttgaatatgtgaatcggtgtatatgtgcattgttgaacttttgg 23543933  T
Q  491 tgatttttgtgaatatttgaac 512  Q
    | ||| ||||| ||| ||||||    
T  23543934 taattgttgtggatacttgaac 23543955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 352 - 483
Target Start/End: Complemental strand, 18032927 - 18032796
Alignment:
Q  352 aacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttga 451  Q
    |||||||||||||||||| |||||  ||| ||||||||||||||||| ||||||||||||| ||| |||||| |  |||||||||||||| | ||||||     
T  18032927 aacggtaaaattatctcttgaatctaatggtaccacatgcatctagatgagtctagaacattgcacgcatttgttaattggtgagtcgagccatacttgg 18032828  T
Q  452 ttatgtgaatcggtgtatatgtgcattggtga 483  Q
     |||||||||||||||||||||| ||||||||    
T  18032827 atatgtgaatcggtgtatatgtgtattggtga 18032796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 64 - 218
Target Start/End: Complemental strand, 18179184 - 18179027
Alignment:
Q  64 atgattatcatgttgatacttttggtga-tatgaatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgtt-gta 161  Q
    ||||||||  ||||||| |||||| ||| ||| |||| ||||||| |||||||||| ||||| ||| ||||||||||||||||||||||||||||| ||     
T  18179184 atgattatggtgttgattcttttgatgactataaataaatgaattgatgatgacttgttgattgtatggatgtaagtatttgataatgcaattgttggtg 18179085  T
Q  162 aataacataattcagggtgattgttatgttaatgtctatg-aggtgaattatgcattg 218  Q
    ||||||||| ||   | |||||||||||||||||||||||  ||||| ||||||||||    
T  18179084 aataacatagttggtgatgattgttatgttaatgtctatgttggtgagttatgcattg 18179027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 83 - 310
Target Start/End: Complemental strand, 18827154 - 18826929
Alignment:
Q  83 ttttggtgatatgaatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-taaataacataattcagggtga 181  Q
    |||||||||| | | | ||||||||  ||||||||| ||||| ||| || | ||| |||||||||||| |||||||| | ||||||||||||    ||||    
T  18827154 ttttggtgatttaatttgatgaattggtgatgacttgttgattgtacggtt-taattatttgataatgtaattgttggtgaataacataattggtagtga 18827056  T
Q  182 ttgttatgttaatgtctatga-ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaa 280  Q
    || |||||||||||||||||  ||||| ||||||||||||||||| | |||||||||||||||||||||  |||| | | || |||||||||| |||| |    
T  18827055 ttattatgttaatgtctatgttggtgagttatgcattgtcgagtcat-acttgaagtccatgcattcattttcat-atttaggtgatttgaagaatgt-a 18826959  T
Q  281 atgcggggtgtttattacatagcttctgca 310  Q
    ||  | ||||||||| ||||||||||||||    
T  18826958 atttgtggtgtttatcacatagcttctgca 18826929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 23543603 - 23543708
Alignment:
Q  64 atgattatcatgttgatacttttggtgat-atgaatagatgaattaatgatgacttattgatcgta-ag--------gatgtaagtatttgataatgcaa 153  Q
    |||||||| |||||||| ||||||||||| || |||||||||||| |||||||||||||||| ||| ||        |||||||||||||||||||||||    
T  23543603 atgattatgatgttgattcttttggtgattataaatagatgaatttatgatgacttattgattgtatagattgtatcgatgtaagtatttgataatgcaa 23543702  T
Q  154 ttgttg 159  Q
    ||||||    
T  23543703 ttgttg 23543708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 382 - 483
Target Start/End: Original strand, 31195906 - 31196007
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt-atctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattgg 480  Q
    ||||||||||||||||||||||||||||||| |||||||||| |   |||| ||||||| ||| || |||| ||||||| | ||| ||| ||||||||||    
T  31195906 taccacatgcatctagaagagtctagaacattgcatgcatttgaataattgatgagtcgtgtcataattgaatatgtgacttggt-tatttgtgcattgg 31196004  T
Q  481 tga 483  Q
    |||    
T  31196005 tga 31196007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 15550308 - 15550360
Alignment:
Q  204 gtgaattatgcattgtcgagtccttacttg-aagtccatgcattcatagtcat 255  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  15550308 gtgaattatgcattctcgagtctttacttgaaagtccatgcattcatagtcat 15550360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 15662368 - 15662414
Alignment:
Q  204 gtgaattatgcattgtcgagtccttacttgaagtccatgcattcata 250  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  15662368 gtgagttatgcattgtcgagtctttacttgaagttcatgcattcata 15662414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 16041166 - 16041207
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  16041166 taccgcatgcatctagaagagtctagaacattgcatgcattt 16041207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 16042842 - 16042883
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  16042842 taccgcatgcatctagaagagtctagaacattgcatgcattt 16042883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 17500559 - 17500518
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  17500559 taccgcatgcatctagaagagtctagaacattgcatgcattt 17500518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 18610801 - 18610760
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  18610801 taccgcatgcatctagaagagtctagaacattgcatgcattt 18610760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 25608683 - 25608642
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  25608683 taccgcatgcatctagaagagtctagaacattgcatgcattt 25608642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 422
Target Start/End: Complemental strand, 17265449 - 17265409
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcatt 422  Q
    |||| |||||||||||||||||||||||||| |||||||||    
T  17265449 taccgcatgcatctagaagagtctagaacattgcatgcatt 17265409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 528
Target Start/End: Complemental strand, 24623243 - 24623163
Alignment:
Q  449 tgattatgtgaatcggtgtatatgtgcattggtgacttttagtgatttttgtgaatatttgaa-ccagactctaattgtat 528  Q
    ||||||||||||| ||||||||||||||||||||  ||||  ||||  ||||||||| ||||| | |||||| ||||||||    
T  24623243 tgattatgtgaattggtgtatatgtgcattggtggattttgttgatggttgtgaataattgaatcaagactccaattgtat 24623163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 16216602 - 16216552
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttg-aagtccatgcattcatagt 252  Q
    ||||| || |||||||||||||| ||||||| |||||||||||||||||||    
T  16216602 ggtgatttgtgcattgtcgagtctttacttgaaagtccatgcattcatagt 16216552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 20177661 - 20177702
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||| ||||||||||||||| || ||||||||||    
T  20177661 taccacatgcatgtagaagagtctagaatattgcatgcattt 20177702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 20222388 - 20222429
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||| ||||||||||||||| || ||||||||||    
T  20222388 taccacatgcatgtagaagagtctagaatattgcatgcattt 20222429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 28932876 - 28932831
Alignment:
Q  212 tgcattgtcgagtccttacttga-agtccatgcattcatagtcata 256  Q
    |||||||||||||| |||||||| |||||||||||||||| |||||    
T  28932876 tgcattgtcgagtctttacttgagagtccatgcattcataatcata 28932831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 7e-72; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 64 - 483
Target Start/End: Complemental strand, 10973665 - 10973246
Alignment:
Q  64 atgattatcatgttgatacttttggtgat-atgaatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgtt-gta 161  Q
    ||||||||  ||||||| |||||| |||| |||| || ||||||| |||||||||| ||||| ||| |  |||||||||||||||||||||||||| ||     
T  10973665 atgattatgttgttgattcttttgatgattatgattaaatgaattgatgatgacttgttgattgtatgattgtaagtatttgataatgcaattgttggtg 10973566  T
Q  162 aataacataattcagggtgattgttatgttaatgtctatg-aggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatg 260  Q
    ||||||||||||   ||||||| |||||||||||||||||  ||||| ||| |||||||| ||| ||||||||||| ||||||||||||||| || | ||    
T  10973565 aataacataattggtggtgattattatgttaatgtctatgttggtgagttaagcattgtcaagtacttacttgaaggccatgcattcatagtgat-attg 10973467  T
Q  261 agttgatttgaagtatgtaaatgcggggtgtttattacatagcttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaa 360  Q
    || |||||||||| |||||| ||   ||||||| ||||||||||||| |||| |||| ||  | |||| |||||||| ||| ||||||||||||||||||    
T  10973466 aggtgatttgaagaatgtaactg-atggtgtttgttacatagcttctacagaacata-attggtggtgtttattatgttggtggattcattaacggtaaa 10973369  T
Q  361 a-ttatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattgg-tgagtcgagtcttacttgattatgtg 458  Q
    | ||||||| ||||||||||| |||||| |||||||||||||| ||| | ||| |||| ||||     ||||| ||||||||||| ||||||||||||||    
T  10973368 atttatctccggaatcctatggtaccacgtgcatctagaagagcctatagcattgcatacatt--gtgattggatgagtcgagtcatacttgattatgtg 10973271  T
Q  459 aatcggtgtatatgtgcattggtga 483  Q
    ||| |||||||| ||||||||||||    
T  10973270 aattggtgtatacgtgcattggtga 10973246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 111 - 425
Target Start/End: Complemental strand, 12975341 - 12975026
Alignment:
Q  111 gatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-taaataacataattcagggtgattgttatgttaatgtctatgag-gtgaa 208  Q
    |||||||| ||||| ||| | |||||||||||||||||||||||||||| | ||||||||||||   ||||||| ||||||||||||||| |   ||||     
T  12975341 gatgacttgttgattgtatgaatgtaagtatttgataatgcaattgttggtgaataacataattggtggtgattattatgttaatgtctaagttagtgag 12975242  T
Q  209 ttatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttctg 308  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |   |||||| |||||||||| |||||| ||   ||||||||||||||||||| ||    
T  12975241 ttatgcattgtcgagtccttatttgaagtccatgcattcatagcc--taatgaggtgatttgaagaatgtaattg-atggtgtttattacatagcttatg 12975145  T
Q  309 cagagcatagatgcggggtgattattatgctgga---ggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtct 405  Q
    |||| |||| ||    |||| |||||||| ||||   ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||  ||||    
T  12975144 cagaacata-attgatggtgtttattatgttggacgtggattcattaacggtaaaattatatctggaatcctatggtaccacatgcatctagaaatgtct 12975046  T
Q  406 agaacatagcatgcatttat 425  Q
    ||||||| |||| |||||||    
T  12975045 agaacattgcatacatttat 12975026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 64 - 479
Target Start/End: Original strand, 19728666 - 19729099
Alignment:
Q  64 atgattatcatgttgatacttttggtgat-atgaatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-ta 161  Q
    |||||||| |||||||| ||||  ||||| | || ||||||  || |||||||||| |||||  || |||||||||||||||||||| ||||||||| |     
T  19728666 atgattatgatgttgattctttcagtgattacgactagatggtttgatgatgacttgttgattatatggatgtaagtatttgataattcaattgttggtg 19728765  T
Q  162 aataacataattcagggt-gattgttatgttaatgtctatgaggt-gaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaat 259  Q
    |||||||||| | ||||| |||| ||||||||| || | ||| || ||||   ||||||| ||||||||||||||||| ||||||||||||||||||       
T  19728766 aataacataaatgagggttgattattatgttaaagtatgtgaagttgaatagcgcattgtggagtccttacttgaagttcatgcattcatagtcatac-- 19728863  T
Q  260 gagttgatttgaagtatgta---------------aatgcggggtgtttattacatagcttctgcagagcatagatgcggggtgattattatgctggagg 344  Q
    |||  |||||||||||||||               ||||| || ||  |||||||||  |||| ||   |||| |||| || |||||||||||  |  ||    
T  19728864 gagccgatttgaagtatgtatatatgcgggttgaaaatgcaggttgactattacataatttctacaagacataaatgcaggttgattattatgtcgatgg 19728963  T
Q  345 attcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtc- 443  Q
    ||||||||||||| |||| || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||  ||||||||||||||||     
T  19728964 attcattaacggtcaaatgatatctggaatcttatggtaccacatgcatctagaagagtctagaacattgcatgcacttattaattggtgagtcgagtct 19729063  T
Q  444 ttacttgattatgtgaatcggtgtatatgtgcattg 479  Q
    |||||||| ||||||||||||||| |||||| ||||    
T  19729064 ttacttgaatatgtgaatcggtgtgtatgtgtattg 19729099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 204 - 421
Target Start/End: Complemental strand, 23295959 - 23295742
Alignment:
Q  204 gtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagc 303  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||  |  || |||||||||| |||||| || |   |||||||||||||||    
T  23295959 gtgagttatgcattgtcgagtccttacttgaagtccatgcattcgtagtcatttaa-aggtgatttgaagaatgtaattg-gtaatgtttattacatagc 23295862  T
Q  304 ttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcct-atgataccacatgcatct--agaag 400  Q
    ||||||||| ||||  ||  |  || |||| ||| ||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||    
T  23295861 ttctgcagaacataattgatga-tgtttatcatgttggtggattcattaacggtaaaattatctctggaatcctaatggtaccacatgcatctagagaag 23295763  T
Q  401 agtctagaacatagcatgcat 421  Q
    ||||||||||||  |||||||    
T  23295762 agtctagaacattacatgcat 23295742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 353 - 504
Target Start/End: Complemental strand, 1560474 - 1560321
Alignment:
Q  353 acggtaaaattatctctggaatccta-tgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttga 451  Q
    ||||||||||||||||  ||||  || || ||||||||| || |||||||||||||||||| ||| ||| || |  |||| ||| ||||||| |||||||    
T  1560474 acggtaaaattatctccagaattttaatggtaccacatgtatatagaagagtctagaacattgcaagcaattgttaattgatgaatcgagtcatacttga 1560375  T
Q  452 ttatgtgaatcggtgtatatgtgcattggtgact-tttagtgatttttgtgaat 504  Q
     ||||  |||| |||||||||||||||||||| | ||| |||||| ||||||||    
T  1560374 atatgcaaatcagtgtatatgtgcattggtgaatgtttggtgattgttgtgaat 1560321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 353 - 483
Target Start/End: Original strand, 5485934 - 5486064
Alignment:
Q  353 acggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgat 452  Q
    |||||||||||||||  ||||| | ||  ||||||||||| ||||||||| ||||||||| ||||||| ||||   ||||||||||| ||| || ||||     
T  5485934 acggtaaaattatcttaggaattcaattgtaccacatgcacctagaagagactagaacattgcatgcacttattatttggtgagtcgtgtcataattgaa 5486033  T
Q  453 tatgtgaatcggtgtatatgtgcattggtga 483  Q
    ||| ||| |  ||| || |||||||||||||    
T  5486034 tatatgacttagtgaatttgtgcattggtga 5486064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 483
Target Start/End: Complemental strand, 24217421 - 24217293
Alignment:
Q  356 gtaaaattatctctggaatcctat-gataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgatta 454  Q
    |||||||||||| | ||||||||| | |||||||||||| |||||||||||||||||| |||| || ||    ||||||||||   ||| ||||||| ||    
T  24217421 gtaaaattatctatagaatcctattggtaccacatgcatttagaagagtctagaacattgcattcacttgataattggtgagttatgtcatacttgacta 24217322  T
Q  455 tgtgaatcggtgtatatgtgcattggtga 483  Q
    ||||||| | ||  |||||||||| ||||    
T  24217321 tgtgaattgatgattatgtgcatttgtga 24217293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 12466180 - 12466221
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  12466180 taccacatacatctagaagagtctagaacattgcatgcattt 12466221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 15482334 - 15482379
Alignment:
Q  212 tgcattgtcgagtccttacttgaa-gtccatgcattcatagtcata 256  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||    
T  15482334 tgcattgtcgagtctttacttgaaagtccatgcattcatagtcata 15482379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 16374922 - 16374881
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  16374922 taccgcatgcatctagaagagtctagaacattgcatgcattt 16374881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 19627871 - 19627830
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  19627871 taccgcatgcatctagaagagtctagaacattgcatgcattt 19627830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 22595123 - 22595164
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  22595123 taccgcatgcatctagaagagtctagaacattgcatgcattt 22595164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 31162518 - 31162559
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  31162518 taccgcatgcatctagaagagtctagaacattgcatgcattt 31162559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 35010943 - 35010984
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  35010943 taccgcatgcatctagaagagtctagaacattgcatgcattt 35010984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 12466005 - 12466045
Alignment:
Q  209 ttatgcattgtcgagtccttacttgaagtccatgcattcat 249  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  12466005 ttatgctttgtcgagtctttacttgaagtccatgcattcat 12466045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 22542105 - 22542053
Alignment:
Q  204 gtgaattatgcattgtcgagtccttacttg-aagtccatgcattcatagtcat 255  Q
    |||||||||||||||||||||| |||||||  ||||||||||| |||||||||    
T  22542105 gtgaattatgcattgtcgagtctttacttgttagtccatgcatgcatagtcat 22542053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 528
Target Start/End: Original strand, 5486081 - 5486160
Alignment:
Q  449 tgattatgtgaatcggtgtatatgtgcattggtgacttttagtgatttttgtgaatatttgaaccagactctaattgtat 528  Q
    ||||||||||||| ||||||||||||| ||||||  ||||  ||||  |||||  |||||| ||||| ||||||||||||    
T  5486081 tgattatgtgaattggtgtatatgtgctttggtggattttgttgatggttgtgggtatttggaccaggctctaattgtat 5486160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 423
Target Start/End: Original strand, 11374489 - 11374524
Alignment:
Q  388 atgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||||||||||||||||| ||||||||||    
T  11374489 atgcatctagaagagtctagaacattgcatgcattt 11374524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 423
Target Start/End: Original strand, 29162148 - 29162183
Alignment:
Q  388 atgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||||||||||||||||| ||||||||||    
T  29162148 atgcatctagaagagtctagaacattgcatgcattt 29162183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 423
Target Start/End: Original strand, 17858014 - 17858052
Alignment:
Q  385 cacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  17858014 cacatgcatttagaagagtctagaacattgcatgcattt 17858052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 17084982 - 17085023
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| ||||||||||||| |||||||||||| ||||||||||    
T  17084982 taccgcatgcatctagaaaagtctagaacattgcatgcattt 17085023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 13122255 - 13122307
Alignment:
Q  204 gtgaattatgcattgtcgagtccttacttg-aagtccatgcattcatagtcat 255  Q
    |||||||||||||||||||||| |||  || |||||||||||||| |||||||    
T  13122255 gtgaattatgcattgtcgagtcgttatgtgaaagtccatgcattcgtagtcat 13122307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 4e-70; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 64 - 478
Target Start/End: Original strand, 19317789 - 19318220
Alignment:
Q  64 atgattatcatgttgatacttttggtgat-atgaatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-ta 161  Q
    |||||||| |||||||| ||||||||||| || |||| |||| || |||| ||||| ||||| ||| |||||||||||||||||||||||||||||| |     
T  19317789 atgattatgatgttgattcttttggtgattataaatatatgatttgatgaggacttgttgatagtatggatgtaagtatttgataatgcaattgttggtg 19317888  T
Q  162 aataacataattcagggt-gattgttatgttaatgtctatgaggtgaatta-tgcattgtcgagtccttacttgaagtccatgcattcatagtcataaat 259  Q
    |||||| ||| |  |||| |||| ||||||||| || | ||| || || || |||||||||||||||||||||||||||| ||||||||||||||||  |    
T  19317889 aataacttaaatgcgggttgattattatgttaaagtatgtgaagttaaatagtgcattgtcgagtccttacttgaagtccttgcattcatagtcata--t 19317986  T
Q  260 gagttgatttgaagtatgtaaa--tgcggggtg----------tt---tattacatagcttctgcagagcatagatgcggggtgattattatgctggagg 344  Q
    ||| ||||||||||||||||||  |||||| ||          ||   |||||||||| |||| | |  |||| ||| ||| |||||||||||  || ||    
T  19317987 gagatgatttgaagtatgtaaaaatgcgggttgaaaatgagggttgactattacatagtttctacgggacataaatgtgggttgattattatgtcggtgg 19318086  T
Q  345 attcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtct 444  Q
    |||||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||  |||||||||||   |||||||||||||||     
T  19318087 attcattaacggtaaaatcatctctgaaatcttatggtaccacatgcatctagaagagtctagaacattacatgcatttattatttggtgagtcgagtcg 19318186  T
Q  445 tacttgattatgtgaatcggtgtatatgtgcatt 478  Q
    |||||||||||||| || |||||||| |||||||    
T  19318187 tacttgattatgtgtattggtgtatacgtgcatt 19318220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 64 - 483
Target Start/End: Complemental strand, 19267243 - 19266821
Alignment:
Q  64 atgattatcatgttgatacttttggtgat-atgaatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-ta 161  Q
    ||||||||  ||||||| |||||| |||| ||||||| ||||||| |||||||||| ||||| ||| | |||||||||||||||||||||||||||| |     
T  19267243 atgattatggtgttgattcttttgatgattatgaataaatgaattgatgatgacttgttgattgtatgtatgtaagtatttgataatgcaattgttggtg 19267144  T
Q  162 aataacataattcagggtgattgttatgttaatgtctatga-ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcat----- 255  Q
    ||||||||||||   ||||||| |||||| ||||| ||||  ||||| || ||||||||||||||||||||||||||||||||||||||||||||         
T  19267143 aataacataattggtggtgattattatgt-aatgtttatgttggtgagttgtgcattgtcgagtccttacttgaagtccatgcattcatagtcatgttga 19267045  T
Q  256 aaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttctgcagagcatagatgcggggtgattattatgctggaggattcattaacg 355  Q
       |||| |||||||||| |||||| || | |||||||||||||||||||||||| | |||| ||  | |||| |||||||| ||| ||||||| ||| |    
T  19267044 tgttgaggtgatttgaagaatgtaattg-gtggtgtttattacatagcttctgcataacata-attggtggtgtttattatgttggtggattca-taatg 19266948  T
Q  356 gt-aaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgatta 454  Q
    || |||||||||||  |||||||||| ||| ||||||||||||||||||||| ||||  ||  | | || |   ||||||||||||||| ||||||||||    
T  19266947 gtaaaaattatctccagaatcctatggtactacatgcatctagaagagtctacaacaatgc--gtacttgtgatttggtgagtcgagtcatacttgatta 19266850  T
Q  455 tgtgaatcggtgtatatgtgcattggtga 483  Q
    ||||||| |||||||| |||| |||||||    
T  19266849 tgtgaattggtgtatacgtgctttggtga 19266821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 330 - 477
Target Start/End: Complemental strand, 25341024 - 25340876
Alignment:
Q  330 ttattatgctggaggattcattaacggtaaaattatctctggaatccta-tgataccacatgcatctagaagagtctagaacatagcatgcatttatcta 428  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| |||||||||| |  |    
T  25341024 ttattatgttggtggattcattaacggtaaaattatctctggaatcctaatggtaccacatgcatctagatgagtctagaacattgcatgcatttgttaa 25340925  T
Q  429 ttggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcat 477  Q
    ||||||||||||||| ||||||  ||||| ||| ||||| |||||||||    
T  25340924 ttggtgagtcgagtcatacttggatatgtcaattggtgtgtatgtgcat 25340876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 21298478 - 21298359
Alignment:
Q  138 gtatttgataatgcaattgttg-taaataacataattcagggtgattgttatgttaatgtctatga-ggtgaattatgcattgtcgagtccttacttgaa 235  Q
    |||| ||||||||||||||||| | ||||||||||||   ||||||| | |||||||||||||||  ||||| || ||||||||||||| ||||||||||    
T  21298478 gtatctgataatgcaattgttggtgaataacataattggtggtgattatcatgttaatgtctatgttggtgagttgtgcattgtcgagttcttacttgaa 21298379  T
Q  236 gtccatgcattcatagtcat 255  Q
    ||||||| ||| ||||||||    
T  21298378 gtccatgaatttatagtcat 21298359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 21304184 - 21304065
Alignment:
Q  138 gtatttgataatgcaattgttg-taaataacataattcagggtgattgttatgttaatgtctatga-ggtgaattatgcattgtcgagtccttacttgaa 235  Q
    |||| ||||||||||||||||| | ||||||||||||   ||||||| | |||||||||||||||  ||||| || ||||||||||||| ||||||||||    
T  21304184 gtatctgataatgcaattgttggtgaataacataattggtggtgattatcatgttaatgtctatgttggtgagttgtgcattgtcgagttcttacttgaa 21304085  T
Q  236 gtccatgcattcatagtcat 255  Q
    ||||||| ||| ||||||||    
T  21304084 gtccatgaatttatagtcat 21304065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 21312021 - 21311902
Alignment:
Q  138 gtatttgataatgcaattgttg-taaataacataattcagggtgattgttatgttaatgtctatga-ggtgaattatgcattgtcgagtccttacttgaa 235  Q
    |||| ||||||||||||||||| | ||||||||||||   ||||||| | |||||||||||||||  ||||| || ||||||||||||| ||||||||||    
T  21312021 gtatctgataatgcaattgttggtgaataacataattggtggtgattatcatgttaatgtctatgttggtgagttgtgcattgtcgagttcttacttgaa 21311922  T
Q  236 gtccatgcattcatagtcat 255  Q
    ||||||| ||| ||||||||    
T  21311921 gtccatgaatttatagtcat 21311902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 477
Target Start/End: Complemental strand, 37275869 - 37275744
Alignment:
Q  353 acggtaaaattatctctggaatccta-tgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttga 451  Q
    |||||||||||||||| ||||||| | || ||||||||| || |||||||| ||||||||| ||||||| ||    |||||||||| | ||| |||||||    
T  37275869 acggtaaaattatctccggaatccaattggtaccacatgtatttagaagagcctagaacattgcatgcacttgataattggtgagttgtgtcatacttga 37275770  T
Q  452 ttatgtgaatcggtgtatatgtgcat 477  Q
     ||||||||| ||||  |||||||||    
T  37275769 ctatgtgaattggtgattatgtgcat 37275744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 356 - 477
Target Start/End: Complemental strand, 37278137 - 37278015
Alignment:
Q  356 gtaaaattatctctggaatcctat-gataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgatta 454  Q
    ||||||||||||| ||||||| || | |||||| || ||||| ||||||||||||||| ||||||| ||    |||||||||| | ||| ||||||| ||    
T  37278137 gtaaaattatctccggaatccaattggtaccacgtgtatctaaaagagtctagaacattgcatgcacttgataattggtgagttgtgtcatacttgacta 37278038  T
Q  455 tgtgaatcggtgtatatgtgcat 477  Q
    ||||||| ||||  |||||||||    
T  37278037 tgtgaattggtgattatgtgcat 37278015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 14343508 - 14343549
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  14343508 taccacatgcatctagaagagtctggaacattgcatgcattt 14343549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 34937992 - 34937951
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  34937992 taccgcatgcatctagaagagtctagaacattgcatgcattt 34937951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 423
Target Start/End: Original strand, 16837014 - 16837050
Alignment:
Q  387 catgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||||||||||||||||| ||||||||||    
T  16837014 catgcatctagaagagtctagaacattgcatgcattt 16837050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Complemental strand, 26058443 - 26058400
Alignment:
Q  378 atgataccacatgcatctagaagagtctagaacatagcatgcat 421  Q
    |||||||||||||||| |||| | ||||||||||||||||||||    
T  26058443 atgataccacatgcatgtagaggtgtctagaacatagcatgcat 26058400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 18532420 - 18532458
Alignment:
Q  384 ccacatgcatctagaagagtctagaacatagcatgcatt 422  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  18532420 ccacatgcatctagaggagtctagaacattgcatgcatt 18532458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 22055384 - 22055422
Alignment:
Q  384 ccacatgcatctagaagagtctagaacatagcatgcatt 422  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  22055384 ccacatgcatctagaggagtctagaacattgcatgcatt 22055422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 37278276 - 37278239
Alignment:
Q  217 tgtcgagtccttacttgaagtccatgcattcatagtcat 255  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  37278276 tgtcgagtc-ttacttgaagtccatgcattcatagtcat 37278239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 11765053 - 11765094
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| ||||||||||||||||||||||||||  |||||||||    
T  11765053 taccgcatgcatctagaagagtctagaacatttcatgcattt 11765094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 19049594 - 19049553
Alignment:
Q  212 tgcattgtcgagtccttacttgaagtccatgcattcatagtc 253  Q
    ||||||||||||||  |||| |||||||||||||||||||||    
T  19049594 tgcattgtcgagtctatactagaagtccatgcattcatagtc 19049553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 178 - 483
Target Start/End: Complemental strand, 18995007 - 18994704
Alignment:
Q  178 gtgattgttatgttaatgtctatga-ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtat 276  Q
    |||||| ||||| |||||| ||||  ||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||| | |||| |||||||||| ||    
T  18995007 gtgattattatgataatgtatatgttggtgagttatgcattgtcgaggccttacttgaagtacatacattcatagtcat-attgaggtgatttgaagaat 18994909  T
Q  277 gtaaatgcggggtgtttattacatagcttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaa-ttatctctggaatc 375  Q
    |||| || | |||| ||||||||||||||||||||| |||| ||  |  ||| |||||||| |||  ||||||||||| |||||| ||||||| ||||||    
T  18994908 gtaattg-gtggtgcttattacatagcttctgcagaacata-attggtagtgtttattatgttggtagattcattaactgtaaaatttatctccggaatc 18994811  T
Q  376 ctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgc 475  Q
     |||| ||||||||||||||||||||||||||| ||| |||| || || |   |||||||||| |||| ||||||||||| ||||| |||||||| ||||    
T  18994810 atatggtaccacatgcatctagaagagtctagagcattgcataca-ttgtgatttggtgagtcaagtcatacttgattatatgaattggtgtatacgtgc 18994712  T
Q  476 attggtga 483  Q
    ||||||||    
T  18994711 attggtga 18994704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 134 - 483
Target Start/End: Complemental strand, 22576825 - 22576478
Alignment:
Q  134 gtaagtatttgataatgcaattgttg-taaataacataattcagggtgattgttatgttaatgtctatga-ggtgaattatgcattgtcgagtccttact 231  Q
    |||||||||||||||| ||||||||| | ||||||||||||     ||||| ||||||||||| |||||  ||||| || |||||||| |||||||||||    
T  22576825 gtaagtatttgataattcaattgttggtgaataacataattagtaatgattattatgttaatgcctatgttggtgacttgtgcattgttgagtccttact 22576726  T
Q  232 tgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttctgcagagcatagatgcggggtgatt 331  Q
    |||||| ||||||||||||||||||  |||| |||||||||| ||||||  | | |||||||||||||||||||||||||| ||||  || | |||| ||    
T  22576725 tgaagttcatgcattcatagtcatat-tgaggtgatttgaagaatgtaatag-gtggtgtttattacatagcttctgcagaacataattg-gtggtgttt 22576629  T
Q  332 attatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattg 431  Q
    || ||| ||| |||||||| ||||||||||||||||  |||| ||| || ||||||||||||||| ||||||||||||||| ||||||| || |   |||    
T  22576628 atcatgttggtggattcat-aacggtaaaattatcttcggaaccctttggtaccacatgcatctaaaagagtctagaacattgcatgcacttgttatttg 22576530  T
Q  432 gtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtga 483  Q
     ||||||| ||| || |||| ||||||| | | || || |||||||||||||    
T  22576529 atgagtcgtgtcatagttgaatatgtgacttgatgaatctgtgcattggtga 22576478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 381 - 538
Target Start/End: Original strand, 24533276 - 24533426
Alignment:
Q  381 ataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattgg 480  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||   |||| ||||||||||||||        ||||||||| |||||||||||||| |    
T  24533276 ataccacatgcatctagatgagtctagaacattgcatccatttaataattgatgagtcgagtctta--------tgtgaatcgatgtatatgtgcatttg 24533367  T
Q  481 tg-acttttagtgatttttgtgaatatttgaaccagactctaattgtatacattatttg 538  Q
    || ||||||  |||| ||||||||||||||||  | |||||||||||||||||||||||    
T  24533368 tggacttttgttgatgtttgtgaatatttgaaatatactctaattgtatacattatttg 24533426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 529
Target Start/End: Complemental strand, 23157834 - 23157753
Alignment:
Q  449 tgattatgtgaatcggtgtatatgtgcattggt-gacttttagtgatttttgtgaatatttgaaccagactctaattgtata 529  Q
    ||||||||||||| ||||||||||||||||||| |||||||  |||   || |||||||||||||||  |||||||||||||    
T  23157834 tgattatgtgaattggtgtatatgtgcattggtggacttttgttgaaggttttgaatatttgaaccatgctctaattgtata 23157753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 449 - 529
Target Start/End: Complemental strand, 23569091 - 23569010
Alignment:
Q  449 tgattatgtgaatcggtgtatatgtgcattggt-gacttttagtgatttttgtgaatatttgaaccagactctaattgtata 529  Q
    ||||||||||||| ||||||||||||||||||| |||||||  |||   || |||||||||||||||  |||||||||||||    
T  23569091 tgattatgtgaattggtgtatatgtgcattggtggacttttgttgaaggttttgaatatttgaaccatgctctaattgtata 23569010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 28579344 - 28579396
Alignment:
Q  204 gtgaattatgcattgtcgagtccttacttg-aagtccatgcattcatagtcat 255  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  28579344 gtgaattattcattgtcgagtctttacttggaagtccatgcattcatagtcat 28579396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 7513682 - 7513723
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  7513682 taccgcatgcatctagaagagtctagaacattgcatgcattt 7513723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 22331207 - 22331166
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  22331207 taccgcatgcatctagaagagtctagaacattgcatgcattt 22331166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 42180029 - 42180070
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  42180029 taccgcatgcatctagaagagtctagaacattgcatgcattt 42180070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 45619700 - 45619741
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  45619700 taccgcatgcatctagaagagtctagaacattgcatgcattt 45619741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 483
Target Start/End: Complemental strand, 23158006 - 23157852
Alignment:
Q  330 ttattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatc--tagaagagtctagaacatagcatgcatttatct 427  Q
    |||||| | ||| |||||||| || ||||||||||||||  ||||| |||| |||||||||||||  ||||||||| || || ||   |||||||| |      
T  23158006 ttattacgttggtggattcat-aatggtaaaattatctcaagaatcatatggtaccacatgcatctatagaagagtataaaatattatatgcatttgtta 23157908  T
Q  428 attggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtga 483  Q
    |||||||||||| ||| || |||| || |||| | |||| ||||| ||||||||||    
T  23157907 attggtgagtcgtgtcataattgaataagtgatttggtgaatatgagcattggtga 23157852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 483
Target Start/End: Complemental strand, 23569263 - 23569109
Alignment:
Q  330 ttattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatc--tagaagagtctagaacatagcatgcatttatct 427  Q
    |||||| | ||| |||||||| || ||||||||||||||  ||||| |||| |||||||||||||  ||||||||| || || ||   |||||||| |      
T  23569263 ttattacgttggtggattcat-aatggtaaaattatctcaagaatcatatggtaccacatgcatctatagaagagtataaaatattatatgcatttgtta 23569165  T
Q  428 attggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggtga 483  Q
    |||||||||||| ||| || |||| || |||| | |||| ||||| ||||||||||    
T  23569164 attggtgagtcgtgtcataattgaataagtgatttggtgaatatgagcattggtga 23569109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 526
Target Start/End: Complemental strand, 22575728 - 22575665
Alignment:
Q  463 ggtgtatatgtgcattggtgacttttagtgatttttgtgaatatttgaaccagactctaattgt 526  Q
    ||||||||||||||||||||  ||||  ||||  ||||||||||||||||||  ||||||||||    
T  22575728 ggtgtatatgtgcattggtggattttgttgatggttgtgaatatttgaaccaagctctaattgt 22575665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 23154430 - 23154501
Alignment:
Q  353 acggtaaaattatctctggaatcctat-gataccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||||||| ||||| | || |||||||||| ||| |||||| || |||||||| ||||||||||    
T  23154430 acggtaaaattatctccggaattcaattgataccacatacatatagaagtgtttagaacattgcatgcattt 23154501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 23565687 - 23565758
Alignment:
Q  353 acggtaaaattatctctggaatcctat-gataccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||||||| ||||| | || |||||||||| ||| |||||| || |||||||| ||||||||||    
T  23565687 acggtaaaattatctccggaattcaattgataccacatacatatagaagtgtttagaacattgcatgcattt 23565758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 249
Target Start/End: Complemental strand, 21653019 - 21652981
Alignment:
Q  211 atgcattgtcgagtccttacttgaagtccatgcattcat 249  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  21653019 atgcattgtcgagtcattacttgaagtcaatgcattcat 21652981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 24342999 - 24343037
Alignment:
Q  384 ccacatgcatctagaagagtctagaacatagcatgcatt 422  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  24342999 ccacatgcatctagaggagtctagaacattgcatgcatt 24343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 18331808 - 18331861
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttg-aagtccatgcattcatagtcat 255  Q
    ||||| || |||||||||||||| ||||||| |||||||||||| |||||||||    
T  18331808 ggtgatttgtgcattgtcgagtctttacttgaaagtccatgcatccatagtcat 18331861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 483
Target Start/End: Complemental strand, 21652851 - 21652747
Alignment:
Q  382 taccacatgcatctaga--agagtctagaacatagcatgcatttatcta-ttggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcatt 478  Q
    ||||||||| |||||||  |||||||||||||| ||||||||||   || ||||||||||| ||| || |||| ||||||| | |||| || || |||||    
T  21652851 taccacatgtatctagagaagagtctagaacattgcatgcatttgaatacttggtgagtcgtgtcataattgaatatgtgacttggtgaatttgggcatt 21652752  T
Q  479 ggtga 483  Q
    |||||    
T  21652751 ggtga 21652747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 271 - 446
Target Start/End: Complemental strand, 6002 - 5827
Alignment:
Q  271 aagtatgtaaatgcggggtgtttattacatagcttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctg 370  Q
    |||||||||||||||||||| ||||||||||||||||||||  |||| ||| |||||||||||||||  || ||||||||||||| |||||| ||||| |    
T  6002 aagtatgtaaatgcggggtgattattacatagcttctgcaggacataaatgtggggtgattattatgtcggtggattcattaacgataaaatcatctccg 5903  T
Q  371 gaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtctta 446  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||   || |||||| ||||||||    
T  5902 gaatcctatggtaccacatgcatctagaagggtctagaacattgcatgcatttattatttagtgagttgagtctta 5827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 64 - 312
Target Start/End: Complemental strand, 2004 - 1755
Alignment:
Q  64 atgattatcatgttgatacttttggtgat-atgaatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-ta 161  Q
    ||||||||  ||||||| |||||| |||| | ||| | ||||||| |||||||||| || || ||| ||||| |||||||||||||| ||||||||| |     
T  2004 atgattatggtgttgattcttttgatgattaggaaaaaatgaattgatgatgacttgtttattgtatggatgcaagtatttgataatacaattgttggtg 1905  T
Q  162 aataacataattcagggtgattgttatgttaatgtctatga-ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatg 260  Q
    ||||||||| ||   ||||||| |||||||||| ||||||  ||||| || |||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  1904 aataacatagttggtggtgattattatgttaatatctatgttggtgagttctgcattgtcgagtccttacttgaagttcatgcattcatagtcat-aatg 1806  T
Q  261 agttgatttgaagtatgtaaatgcggggtgtttattacatagcttctgcaga 312  Q
    || |||||| ||| |||||| || | ||||||||||||||| ||||||||||    
T  1805 aggtgatttcaagaatgtaattg-gtggtgtttattacataacttctgcaga 1755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 356 - 483
Target Start/End: Complemental strand, 1751 - 1625
Alignment:
Q  356 gtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgattat 455  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||  ||| || || |   |  |||||| ||||| ||| ||| |||    
T  1751 gtaaaatcatctctggaatcctatggtaccacatgcatctagaagagtcttgaacatttcataca-ttgtgattcagtgagttgagtcatacatgactat 1653  T
Q  456 gtgaatcggtgtatatgtgcattggtga 483  Q
    |||||| |||||||||||||||||||||    
T  1652 gtgaattggtgtatatgtgcattggtga 1625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 7e-41; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 314 - 505
Target Start/End: Original strand, 18713408 - 18713601
Alignment:
Q  314 catagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacata 413  Q
    |||| ||||||| |||||||||||  |  |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| || |||||     
T  18713408 cataaatgcgggctgattattatgtcgacggattctttaacggtaaaattatctctggaattctatggtaccacatgcatctagaagagtataaaacatt 18713507  T
Q  414 gcatgcatttatctattggtgagtcgagt-cttacttgattatgtgaatcggtgtatatgtgcattggtg-acttttagtgatttttgtgaata 505  Q
     |||| | ||||   |||||||||||||| ||||||||  ||||||||||||| |||||||||||||||| |||||| |||||| |||||||||    
T  18713508 acatgtacttattacttggtgagtcgagtccttacttggatatgtgaatcggtatatatgtgcattggtgaacttttggtgattgttgtgaata 18713601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 314 - 505
Target Start/End: Original strand, 18667736 - 18667929
Alignment:
Q  314 catagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacata 413  Q
    |||| ||||||| |||||||||||  |  | |||| |||||||||||||||||||  |||||||| | |||||||||||||||||||||| ||||||||     
T  18667736 cataaatgcgggttgattattatgtcgacgaattctttaacggtaaaattatctccagaatcctacggtaccacatgcatctagaagagtatagaacatt 18667835  T
Q  414 gcatgcatttatctattggtgagtcgagt-cttacttgattatgtgaatcggtgtatatgtgcattggtg-acttttagtgatttttgtgaata 505  Q
    ||||| | ||||   |||||||||||||| ||||||||| |||||||||| || |||||||||||||||| |||||| |||||| |||||||||    
T  18667836 gcatgtacttattacttggtgagtcgagtccttacttgaatatgtgaatcagtatatatgtgcattggtgaacttttggtgattgttgtgaata 18667929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 100 - 252
Target Start/End: Complemental strand, 11775182 - 11775027
Alignment:
Q  100 gatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgtt-gtaaataacataattcagggtgattgttatgttaatgtct 198  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| |||| || || |||||||||   | ||||| ||||||| |||| |    
T  11775182 gatgaattaatgatgacttgttgattgtatggatgtaagtatttgataatgcaaatgttggtgaaaaacataattggtgatgattattatgttgatgtat 11775083  T
Q  199 atgaggtg--aattatgcattgtcgagtccttacttgaagtccatgcattcatagt 252  Q
    ||  | ||   | |||||||||| ||||||||||||||||||||||||||||||||    
T  11775082 atatgttggagagtatgcattgttgagtccttacttgaagtccatgcattcatagt 11775027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 538
Target Start/End: Complemental strand, 11774879 - 11774736
Alignment:
Q  388 atgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattggt-gactt 486  Q
    ||||||||||| ||||||||||||| |||||||||||    || |||||||||||||||        |||||||| |||||||||||||||||| |||||    
T  11774879 atgcatctagatgagtctagaacattgcatgcatttaatattttgtgagtcgagtctta--------tgtgaatcagtgtatatgtgcattggtggactt 11774788  T
Q  487 ttagtgatttttgtgaatatttgaaccagactctaattgtatacattatttg 538  Q
    ||  ||||  |||||||||||||||| || ||||| |||||| |||||||||    
T  11774787 ttgttgatgattgtgaatatttgaactaggctctagttgtatgcattatttg 11774736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 255
Target Start/End: Original strand, 12451935 - 12452083
Alignment:
Q  113 tgacttattgatcgtaaggatgtaagtatttgataatgcaattgttgt---aaataacataattcagggtgattgttatgttaatgtctatgag---gtg 206  Q
    |||||||||||| ||| | ||||||||||||||| ||||||  ||||    ||| |||||||||   | ||||| |||||||||||| |||  |   |||    
T  12451935 tgacttattgattgtatgaatgtaagtatttgattatgcaaacgttggtaaaaaaaacataattggtgatgattattatgttaatgtatatatgttggtg 12452034  T
Q  207 aattatgcattgtcgagtccttacttgaagtccatgcattcatagtcat 255  Q
    | ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  12452035 agttatgcattgtcgagtccttacttgaagtccattcattcatcgtcat 12452083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 449 - 528
Target Start/End: Complemental strand, 21958633 - 21958553
Alignment:
Q  449 tgattatgtgaatcggtgtatatgtgcattggtg-acttttagtgatttttgtgaatatttgaaccagactctaattgtat 528  Q
    ||||||||||||| |||||| ||||||||||||| ||||||  ||||  |||||||||||||||||| |||||||||||||    
T  21958633 tgattatgtgaattggtgtaaatgtgcattggtggacttttgttgatggttgtgaatatttgaaccaaactctaattgtat 21958553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 483
Target Start/End: Original strand, 18420489 - 18420621
Alignment:
Q  352 aacggtaaaattatctctggaatcctat-gataccacatgcatctagaagagtctagaacatagcatgca-tttatctattggtgagtcgagtcttactt 449  Q
    |||||||||||||||||  |||| |||| | ||| | |||||| ||||||||| |||||||| ||||||| |||||  |||||||||||| ||| |||||    
T  18420489 aacggtaaaattatctccagaattctattggtactatatgcatttagaagagtatagaacattgcatgcactttata-attggtgagtcgtgtcatactt 18420587  T
Q  450 gattatgtgaatcggtgtatatgtgcattggtga 483  Q
    || ||||||||| ||||| ||| |||||| ||||    
T  18420588 gactatgtgaattggtgtttatatgcatttgtga 18420621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 479
Target Start/End: Complemental strand, 20847463 - 20847344
Alignment:
Q  361 attatctctggaatcctat-gataccacatgcatctagaagagtctagaacatagcatgcattt-atctattggtgagtcgagtcttacttgattatgtg 458  Q
    |||||||| ||||||| || | ||||||||| ||||||||||||||||||||| |||||||||| ||| ||||||||  || ||| ||||||| ||||||    
T  20847463 attatctccggaatccaattggtaccacatgtatctagaagagtctagaacattgcatgcatttgatc-attggtgaaacgtgtcatacttgactatgtg 20847365  T
Q  459 aatcggtgtatatgtgcattg 479  Q
     || ||||  |||||||||||    
T  20847364 tattggtgattatgtgcattg 20847344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 439
Target Start/End: Complemental strand, 14616578 - 14616495
Alignment:
Q  356 gtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcg 439  Q
    |||||||||||||  |||||| ||  ||||||||||||||||| ||||||||||||| ||||||| || |  ||||||||||||    
T  14616578 gtaaaattatctcaagaatccaatagtaccacatgcatctagaggagtctagaacattgcatgcacttgttaattggtgagtcg 14616495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 18173379 - 18173306
Alignment:
Q  353 acggtaaaattatctctggaatcct-atgataccacatgcatctag--aagagtctagaacatagcatgcattt 423  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||  |||||||||||| ||  |||||||||    
T  18173379 acggtaaaattatctctgaaatcctaatgataccacatgcatctagacaagagtctagaaaattccatgcattt 18173306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 18420349 - 18420391
Alignment:
Q  212 tgcattgtcgagtccttacttgaagtccatgcattcatagtcat 255  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  18420349 tgcattgtcgagtc-ttacttgaagtccatgcattcatagtcat 18420391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 423
Target Start/End: Original strand, 41918413 - 41918456
Alignment:
Q  380 gataccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||| |||||||||||||||||||||||||| ||||||||||    
T  41918413 gataccgcatgcatctagaagagtctagaacattgcatgcattt 41918456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 423
Target Start/End: Complemental strand, 19076360 - 19076291
Alignment:
Q  356 gtaaaattatctctggaatcctatgataccacatgcatct--agaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||| ||||||| ||| ||||||||||||||  |||| |||||||||||| ||||||||||    
T  19076360 gtaatattatctccggaatccaatggtaccacatgcatctaaagaaaagtctagaacattgcatgcattt 19076291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 19699233 - 19699274
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  19699233 taccgcatgcatctagaagagtctagaacattgcatgcattt 19699274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 19709818 - 19709859
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  19709818 taccgcatgcatctagaagagtctagaacattgcatgcattt 19709859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 40902365 - 40902406
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  40902365 taccgcatgcatctagaagagtctagaacattgcatgcattt 40902406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 398
Target Start/End: Original strand, 12452118 - 12452186
Alignment:
Q  331 tattatgctggaggattcattaacggtaaaattatctctggaatccta-tgataccacatgcatctaga 398  Q
    ||||||| || |||||||| |||||||||||||||||| | ||||||| || || ||||||||||||||    
T  12452118 tattatgttgaaggattcaataacggtaaaattatctccgaaatcctattggtagcacatgcatctaga 12452186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 13933375 - 13933304
Alignment:
Q  353 acggtaaaattatctctggaatcctatga-taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||||||| |||||||| || | || ||||||||| |||||| |||| |||||| ||||||||||    
T  13933375 acggtaaaattatctttggaatccaattagtatcacatgcatgtagaagtgtctggaacattgcatgcattt 13933304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 15676507 - 15676545
Alignment:
Q  384 ccacatgcatctagaagagtctagaacatagcatgcatt 422  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  15676507 ccacatgcatctagaggagtctagaacattgcatgcatt 15676545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 16028761 - 16028815
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttg-aagtccatgcattcatagtcata 256  Q
    ||||| || |||||||||||||| ||||||| |||||||||||||||| ||||||    
T  16028761 ggtgatttgtgcattgtcgagtctttacttgaaagtccatgcattcatggtcata 16028815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 420
Target Start/End: Original strand, 1920034 - 1920099
Alignment:
Q  356 gtaaaattatctctggaatcctatga-taccacatgcatctagaagagtctagaacatagcatgca 420  Q
    ||||||||||||||||||||| || | |||||||||  | |||||| ||||||||||| |||||||    
T  1920034 gtaaaattatctctggaatccaattagtaccacatgtgtgtagaagtgtctagaacattgcatgca 1920099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 483
Target Start/End: Complemental strand, 5889843 - 5889787
Alignment:
Q  429 ttggtgagtcgagtcttacttgattat--gtgaatcggtgtatatgtgcattggtga 483  Q
    |||||||||| |||| ||||||| |||  ||||||| ||||||||||||||||||||    
T  5889843 ttggtgagtcaagtcatacttgaatatatgtgaatcagtgtatatgtgcattggtga 5889787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 10115823 - 10115876
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcata 256  Q
    ||||| ||||| ||||||||||  || ||| |||||||||||||||||||||||    
T  10115823 ggtgatttatgtattgtcgagtgttttcttaaagtccatgcattcatagtcata 10115876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 11923545 - 11923598
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttg-aagtccatgcattcatagtcat 255  Q
    ||||| || |||||||||||||| ||||||| ||||||||||||||| ||||||    
T  11923545 ggtgatttgtgcattgtcgagtctttacttgaaagtccatgcattcacagtcat 11923598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 15215506 - 15215547
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||| ||||    
T  15215506 taccgcatgcatctagaagagtctagaacattgcatgtattt 15215547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 83; Significance: 5e-39; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 210 - 483
Target Start/End: Original strand, 100940 - 101214
Alignment:
Q  210 tatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttctgc 309  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||||   | || |||||||||| |||||| || | | | |||||||||| ||||||||    
T  100940 tatgcattgtcaagtccttaattgaagttcatgcattcatagtcattt-taaggtgatttgaagaatgtaattg-gagatatttattacatggcttctgc 101037  T
Q  310 agagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatccta-tgataccacatgcatctagaagagtctaga 408  Q
    ||| ||||  || | | || |||||||| ||| ||||||||||| | ||||||||||||  |||||||| || ||||||||||||||||| |||||||||    
T  101038 agaacataattg-gtgatgtttattatgttggtggattcattaatgataaaattatctcctgaatcctaatggtaccacatgcatctagatgagtctaga 101136  T
Q  409 acatagcatgcatttatctattggtgagtcgagtcttac--ttgattatgtgaa-tcggtgtatatgtgcattggtga 483  Q
    |||| ||||||||||||  |||||| ||||||||| |||  |||  |||||||| | ||||| |||||||||||||||    
T  101137 acattgcatgcatttattaattggtaagtcgagtcatacttttggatatgtgaatttggtgtgtatgtgcattggtga 101214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 100839 - 100885
Alignment:
Q  113 tgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg 159  Q
    |||||||||||| ||| | |||||||||||||||||||||| |||||    
T  100839 tgacttattgattgtatgaatgtaagtatttgataatgcaaatgttg 100885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 78; Significance: 4e-36; HSPs: 3)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 203 - 420
Target Start/End: Complemental strand, 34158 - 33941
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatag 302  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||||||   |||| | |||||||| |||||| ||  |  ||||||||||||||    
T  34158 ggtgaattatgcattgtcgagtccttactcgaagtcgttgcattcatagtcattt-tgaggtcatttgaagaatgtaattgatga-tgtttattacatag 34061  T
Q  303 cttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcct-atgataccacatgcatct--agaa 399  Q
    |||||||||| ||||  || | | || |||||||| ||| |||||||||||||||||||||||||| |||||||| ||| ||||| | ||||||  ||||    
T  34060 cttctgcagaacataattg-gtgatgtttattatgttggtggattcattaacggtaaaattatctccggaatcctaatggtaccataagcatctagagaa 33962  T
Q  400 gagtctagaacatagcatgca 420  Q
    ||||||||||||| |||||||    
T  33961 gagtctagaacattgcatgca 33941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 332 - 423
Target Start/End: Complemental strand, 33924 - 33830
Alignment:
Q  332 attatgctggaggattcattaacggtaaaattatctctggaatcct-atgataccacatgcatct--agaagagtctagaacatagcatgcattt 423  Q
    |||||| ||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||||||  ||||||||||||||||| ||||||||||    
T  33924 attatgttggtggattcattaacggtaaaattatctccggaatcctaatggtaccacatgcatctagagaagagtctagaacattgcatgcattt 33830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 34223 - 34177
Alignment:
Q  113 tgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg 159  Q
    |||||||||||| ||| || ||||||||||||||||||||| |||||    
T  34223 tgacttattgattgtatgggtgtaagtatttgataatgcaaatgttg 34177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 203 - 477
Target Start/End: Complemental strand, 1013 - 742
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatag 302  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||   |||| ||| |||||| |||||| || | | |||||||||||||     
T  1013 ggtgagttatgcattgtcgagtctttacttgaagtccatgcattcatagtcattt-tgaggtgaattgaagaatgtaattg-gtgatgtttattacataa 916  T
Q  303 cttctgcagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatcctat-gataccacatgcatctagaaga 401  Q
    ||| |||| |  |||  || | | || |||||||| | | |||||||||| || |||||||||||  |||||||||| | ||||| ||||||||||||||    
T  915 cttatgcataatataattg-gtgatgtttattatgtttgtggattcattagcgataaaattatcttcggaatcctattgctaccatatgcatctagaaga 817  T
Q  402 gtctagaacatagcatgcatttatctattggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcat 477  Q
    || |||||||| ||||||| ||||  ||||||||||||  || ||||||  ||||||||| ||||| |||||||||    
T  816 gtttagaacattgcatgcacttat-aattggtgagtcgtatcatacttggatatgtgaattggtgtttatgtgcat 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 209 - 392
Target Start/End: Original strand, 95101 - 95282
Alignment:
Q  209 ttatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatgagttgatttgaagtatgtaaatgcggggtgtttattacatagcttctg 308  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||   |||  |||||||||| |||||| || | | ||||||||||||||||| ||    
T  95101 ttatgcattgtcgagtccttatttgaagtccatgcattcatagtcat-tttgacgtgatttgaagaatgtaactg-gtgatgtttattacatagcttatg 95198  T
Q  309 cagagcatagatgcggggtgattattatgctggaggattcattaacggtaaaattatctctggaatccta-tgataccacatgca 392  Q
    || | |||| ||    | || |||||||| | | | |||||||| ||||||||||||||| ||||||||| || |||||||||||    
T  95199 cataacata-attgatgatgtttattatgttagtgaattcattagcggtaaaattatctccggaatcctattgctaccacatgca 95282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 356 - 423
Target Start/End: Original strand, 295582 - 295652
Alignment:
Q  356 gtaaaattatctctggaatccta-tgataccacatgcatct--agaagagtctagaacatagcatgcattt 423  Q
    ||||||||||||||| ||||||| |||||||||||||||||  |||||||||||||| ||  |||||||||    
T  295582 gtaaaattatctctgaaatcctaatgataccacatgcatctagagaagagtctagaaaattccatgcattt 295652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 423
Target Start/End: Original strand, 3767 - 3863
Alignment:
Q  330 ttattatgctggaggattcattaacggtaaaattatctctggaatccta-tgataccacatgcatct--agaagagtctagaacatagcatgcattt 423  Q
    |||||||| ||| ||||||||||||||| |||||||||| ||||||||| || |||||||||||| |  ||||||||||||||||| ||||||||||    
T  3767 ttattatgttggtggattcattaacggtgaaattatctccggaatcctattggtaccacatgcatttagagaagagtctagaacattgcatgcattt 3863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 3346 - 3399
Alignment:
Q  203 ggtgaattatgcattgtc-gagtccttacttgaagtccatgcattcatagtcat 255  Q
    ||||| |||||||||||  |||||||| ||||||| ||||||||||||||||||    
T  3346 ggtgagttatgcattgtgagagtccttgcttgaagcccatgcattcatagtcat 3399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 64 - 310
Target Start/End: Original strand, 48564 - 48808
Alignment:
Q  64 atgattatcatgttgatacttttggtgat-atgaatagatgaattaatgatgacttattgatcgtaaggatgtaagtatttgataatgcaattgttg-ta 161  Q
    |||||||| |||||||| |||||| |||| || |||  ||| ||| |||||||||  ||||| |||  ||||||||||||||| ||| ||| | ||| |     
T  48564 atgattatgatgttgattcttttgatgattataaatgtatggattgatgatgactggttgattgtatagatgtaagtatttgacaatccaaattttggtg 48663  T
Q  162 aataacataattcagggtgattgttatgttaatgtctatga-ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcataaatg 260  Q
    || ||||||||| |   ||||| |||| ||||||| ||||  ||||| |||| |||||||||||| |||||||||||||||||||||||| ||||   |     
T  48664 aaaaacataattga---tgattattattttaatgtatatgttggtgagttattcattgtcgagtctttacttgaagtccatgcattcataatcat-ttta 48759  T
Q  261 agttgatttgaagtatgtaaatgcggggtgtttattacatagcttctgca 310  Q
    || |||||||| | |||||| || | |||||||||||||| |||||||||    
T  48760 aggtgatttgaggaatgtaattg-gcggtgtttattacattgcttctgca 48808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 504
Target Start/End: Complemental strand, 11574 - 11451
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcatttatctattggtg-agtcgagtcttacttgattatgtgaatcggtgtatatgtgcattgg 480  Q
    |||||||||||||||||||||||||||| || ||||||||||    ||||||| |  || ||| ||||||| ||||||| | |||| |||||||||||||    
T  11574 taccacatgcatctagaagagtctagaatattgcatgcatttgataattggtgaaaacgtgtcatacttgactatgtgacttggtgaatatgtgcattgg 11475  T
Q  481 tgacttttagtgatttttgtgaat 504  Q
    |||   ||  ||||||||||||||    
T  11474 tgaaacttgttgatttttgtgaat 11451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 439
Target Start/End: Original strand, 200799 - 200882
Alignment:
Q  356 gtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcg 439  Q
    |||||||||||||  |||||| ||  ||||||||||||||||| ||||||||||||| ||||||| || |  ||||||||||||    
T  200799 gtaaaattatctcaagaatccaatagtaccacatgcatctagaggagtctagaacattgcatgcacttgttaattggtgagtcg 200882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 382 - 483
Target Start/End: Original strand, 15511 - 15613
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcatttatcta-ttggtgagtcgagtcttacttgattatgtgaatcggtgtatatgtgcattgg 480  Q
    ||||||||||||||||||||||||||||||| ||||||||||   || ||| ||||||| ||| || |||| ||||||| | | || || ||||||||||    
T  15511 taccacatgcatctagaagagtctagaacattgcatgcatttgaatagttgatgagtcgtgtcataattgaatatgtgacttgttgaatttgtgcattgg 15610  T
Q  481 tga 483  Q
    |||    
T  15611 tga 15613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 480
Target Start/End: Complemental strand, 79398 - 79270
Alignment:
Q  352 aacggtaaaattatctctggaatcctatgataccacatgcatctagaagagtctagaacatagcatgcatttatctattggtgagtcgagtcttacttga 451  Q
    |||||||||||| |||  ||||||  ||| ||||| ||||||||||| || |||||||||| ||| |||||| |  |||||||| | ||||| ||||||     
T  79398 aacggtaaaattgtcttcggaatcgaatggtaccagatgcatctagatgaatctagaacattgcacgcatttgttaattggtgaattgagtcatacttgg 79299  T
Q  452 ttatgtgaatcggtgtatatgtgcattgg 480  Q
     || ||||||| |||| | ||||||||||    
T  79298 atacgtgaatcagtgtttctgtgcattgg 79270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 9663 - 9732
Alignment:
Q  357 taaaattatctctggaatccta-tgataccacatgcatct--agaagagtctagaacatagcatgcattt 423  Q
    |||||||||||||| ||||||| |||||||||||||||||  |||||||||||||| ||  |||||||||    
T  9663 taaaattatctctgaaatcctaatgataccacatgcatctagagaagagtctagaaaattccatgcattt 9732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 459
Target Start/End: Complemental strand, 20260 - 20182
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt-atctattggtgagtcgagtcttacttgattatgtga 459  Q
    |||| |||||||||||||||||||||||||| |||||||||| |   |||| ||||||| ||| || ||||||||||||    
T  20260 taccgcatgcatctagaagagtctagaacattgcatgcatttgaataattgatgagtcgtgtcataattgattatgtga 20182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 166 - 207
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  166 taccgcatgcatctagaagagtctagaacattgcatgcattt 207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000008; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 26847 - 26806
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  26847 taccgcatgcatctagaagagtctagaacattgcatgcattt 26806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 27862 - 27821
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  27862 taccgcatgcatctagaagagtctagaacattgcatgcattt 27821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 39858 - 39817
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  39858 taccgcatgcatctagaagagtctagaacattgcatgcattt 39817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 256041 - 256082
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  256041 taccgcatgcatctagaagagtctagaacattgcatgcattt 256082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 14396 - 14436
Alignment:
Q  209 ttatgcattgtcgagtccttacttgaagtccatgcattcat 249  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  14396 ttatgcattgtcgagtcattacttgaagcccatgcattcat 14436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 14588 - 14629
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| ||||||||||||| |||||||||||| ||||||||||    
T  14588 taccgcatgcatctagaatagtctagaacattgcatgcattt 14629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 28039 - 28083
Alignment:
Q  115 acttattgatcgtaaggatgtaagtatttgataatgcaattgttg 159  Q
    |||||||||| ||| |||||||||||||||||||||||| |||||    
T  28039 acttattgattgtatggatgtaagtatttgataatgcaaatgttg 28083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 46964 - 46912
Alignment:
Q  203 ggtgaattatgcattgtcgagtccttacttgaagtccatgcattcatagtcat 255  Q
    ||||| ||||||||||||| ||| |||| || |||||||||||||||||||||    
T  46964 ggtgatttatgcattgtcgggtctttacatggagtccatgcattcatagtcat 46912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 356 - 423
Target Start/End: Complemental strand, 46819 - 46751
Alignment:
Q  356 gtaaaattatctctggaatcc-tatgataccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||| ||||||||| | || |||||||||||| |||||  |||||| |||| ||||||||||    
T  46819 gtaaaattatccctggaatccatttggtaccacatgcatgtagaaatgtctagtacattgcatgcattt 46751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 420
Target Start/End: Original strand, 4141 - 4179
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgca 420  Q
    |||||||||||||||||||||||||||| || |||||||    
T  4141 taccacatgcatctagaagagtctagaatattgcatgca 4179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 423
Target Start/End: Original strand, 12630 - 12663
Alignment:
Q  390 gcatctagaagagtctagaacatagcatgcattt 423  Q
    ||||||||||||||||||||||| ||||||||||    
T  12630 gcatctagaagagtctagaacattgcatgcattt 12663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 315 - 356
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| ||||||||||||||||||||||||||  |||||||||    
T  315 taccgcatgcatctagaagagtctagaacatttcatgcattt 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 12252 - 12211
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| |||||||||||||| ||||||||||| ||||||||||    
T  12252 taccgcatgcatctagaagggtctagaacattgcatgcattt 12211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 36421 - 36462
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| ||||||| |||||||||||||||||| ||||||||||    
T  36421 taccgcatgcatatagaagagtctagaacattgcatgcattt 36462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Original strand, 11063 - 11104
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||||||||||| |||||| ||||||||||| ||||||||||    
T  11063 taccacatgcatgtagaagtgtctagaacattgcatgcattt 11104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 11168 - 11127
Alignment:
Q  382 taccacatgcatctagaagagtctagaacatagcatgcattt 423  Q
    |||| ||||||||| |||||||||||||||| ||||||||||    
T  11168 taccgcatgcatcttgaagagtctagaacattgcatgcattt 11127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 20432 - 20474
Alignment:
Q  212 tgcattgtcgagtccttacttgaagtccatgcattcatagtcata 256  Q
    |||||||||||||| |||||||||||||||||| |||||||||||    
T  20432 tgcattgtcgagtc-ttacttgaagtccatgca-tcatagtcata 20474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University