View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19630_low_18 (Length: 373)
Name: NF19630_low_18
Description: NF19630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19630_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 22653958 - 22654301
Alignment:
| Q |
17 |
agtgcatgtagatgaagaacaagaaataggtttgtaagaagaagaaaaattcgggttaaataccgggtcgagcatgacccggtttgttgagttgttgcaa |
116 |
Q |
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| T |
22653958 |
agtgcatgtagatgaagaacaagaaataggtttgtatgaagaagaaaaattcgggttaaaaaccgggtcaggcatgacccggtttgttgagttgttgcaa |
22654057 |
T |
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| Q |
117 |
tgaagccatgaaagttcacttcctgtgtcaatgactaatgacacgttttgtnnnnnnntgccaatagtaattgaaacagtgagactaacattgtgatgaa |
216 |
Q |
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| T |
22654058 |
tgaagccatgaaagttcacttcctgtgtcaatgactaatgacacgttttgtgggggggtgccaatagtaattgaaacagtgagactaacattgtgatgaa |
22654157 |
T |
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| Q |
217 |
acctaagcttgtttggtggtcttggaagatacccagatgagataacttgtgatttgagtggtaaagttaagatctttgtttgtgttgtgagtggtaaagt |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22654158 |
acctaagcttgtttggtggtcttggaagatacccagatgagataacttgtgatttgagtggtaaagttaagatctttgtttgtgttgtgagtggtaaagt |
22654257 |
T |
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| Q |
317 |
ttgtagaatgagaaaaatgataattttgaaaaatgagtttgtga |
360 |
Q |
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| T |
22654258 |
ttgtagaatgagaaaaatgataattttgagaaatgagtttgtga |
22654301 |
T |
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