View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19630_low_35 (Length: 214)

Name: NF19630_low_35
Description: NF19630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19630_low_35
NF19630_low_35
[»] chr1 (35 HSPs)
chr1 (1-198)||(7941663-7941860)
chr1 (11-96)||(2295163-2295248)
chr1 (11-95)||(37617384-37617468)
chr1 (12-82)||(38001663-38001733)
chr1 (5-93)||(1432576-1432664)
chr1 (11-95)||(50644174-50644258)
chr1 (9-56)||(10233606-10233653)
chr1 (5-57)||(3887589-3887641)
chr1 (5-81)||(7069477-7069553)
chr1 (13-57)||(7119895-7119939)
chr1 (15-97)||(3233932-3234014)
chr1 (11-93)||(5720992-5721074)
chr1 (14-96)||(38247397-38247479)
chr1 (11-57)||(49938814-49938860)
chr1 (11-96)||(33186373-33186458)
chr1 (5-57)||(27145693-27145745)
chr1 (6-82)||(36514608-36514684)
chr1 (8-99)||(489254-489345)
chr1 (10-53)||(4445773-4445816)
chr1 (11-82)||(6557039-6557110)
chr1 (15-54)||(9572061-9572100)
chr1 (9-56)||(24915009-24915056)
chr1 (5-55)||(27820156-27820205)
chr1 (11-57)||(37517123-37517169)
chr1 (5-54)||(10666786-10666834)
chr1 (11-96)||(13810065-13810150)
chr1 (11-96)||(14576572-14576657)
chr1 (5-82)||(39976142-39976219)
chr1 (7-52)||(50725269-50725314)
chr1 (11-52)||(51929501-51929542)
chr1 (5-57)||(27146212-27146264)
chr1 (14-82)||(29904821-29904889)
chr1 (10-50)||(31283987-31284027)
chr1 (26-82)||(33204326-33204382)
chr1 (5-53)||(51695456-51695504)
[»] chr5 (36 HSPs)
chr5 (11-96)||(16937801-16937886)
chr5 (9-96)||(10640018-10640105)
chr5 (5-92)||(11064727-11064814)
chr5 (10-82)||(35445776-35445848)
chr5 (10-93)||(7674713-7674796)
chr5 (11-57)||(16457936-16457982)
chr5 (11-95)||(12857257-12857341)
chr5 (11-95)||(12857624-12857708)
chr5 (5-57)||(29925902-29925954)
chr5 (11-95)||(32009760-32009844)
chr5 (11-94)||(9107157-9107240)
chr5 (5-96)||(41535442-41535533)
chr5 (10-96)||(15246899-15246985)
chr5 (9-55)||(32859679-32859725)
chr5 (9-55)||(32861851-32861897)
chr5 (9-55)||(32862635-32862681)
chr5 (5-95)||(41419380-41419470)
chr5 (11-96)||(7705916-7706001)
chr5 (10-95)||(34736446-34736531)
chr5 (5-42)||(39105525-39105562)
chr5 (12-57)||(39248166-39248211)
chr5 (5-57)||(41981660-41981710)
chr5 (9-57)||(32942659-32942707)
chr5 (13-57)||(39154961-39155005)
chr5 (10-49)||(2568723-2568762)
chr5 (5-95)||(11700223-11700313)
chr5 (15-57)||(17560172-17560214)
chr5 (14-52)||(38033990-38034028)
chr5 (12-57)||(3520645-3520690)
chr5 (8-96)||(1464938-1465026)
chr5 (17-96)||(1773024-1773101)
chr5 (5-57)||(6096608-6096660)
chr5 (17-53)||(6593371-6593407)
chr5 (8-56)||(12433131-12433179)
chr5 (10-50)||(14422578-14422618)
chr5 (23-87)||(15015922-15015986)
[»] chr4 (40 HSPs)
chr4 (9-98)||(13126492-13126581)
chr4 (9-99)||(52315112-52315202)
chr4 (15-96)||(21731574-21731655)
chr4 (16-96)||(49940085-49940165)
chr4 (5-96)||(55437137-55437228)
chr4 (20-89)||(40174633-40174702)
chr4 (11-96)||(54426110-54426195)
chr4 (14-98)||(27043746-27043830)
chr4 (11-95)||(41336827-41336911)
chr4 (5-97)||(49939868-49939960)
chr4 (11-98)||(2244118-2244205)
chr4 (11-94)||(15173223-15173306)
chr4 (5-79)||(1706683-1706757)
chr4 (9-55)||(21523622-21523668)
chr4 (6-75)||(20719765-20719834)
chr4 (10-54)||(23819154-23819198)
chr4 (9-96)||(29774305-29774392)
chr4 (11-57)||(39603127-39603173)
chr4 (5-98)||(35571547-35571640)
chr4 (15-96)||(39691067-39691148)
chr4 (11-95)||(437083-437167)
chr4 (5-57)||(49202706-49202758)
chr4 (9-57)||(56249588-56249636)
chr4 (9-96)||(17822783-17822870)
chr4 (11-54)||(26590330-26590373)
chr4 (14-96)||(18815093-18815175)
chr4 (11-57)||(22030270-22030316)
chr4 (8-82)||(22662074-22662148)
chr4 (8-82)||(22666553-22666627)
chr4 (9-95)||(24169328-24169414)
chr4 (9-55)||(25904182-25904228)
chr4 (6-52)||(47118928-47118974)
chr4 (11-96)||(26783-26868)
chr4 (10-99)||(23459693-23459782)
chr4 (11-96)||(42403941-42404025)
chr4 (5-82)||(49003807-49003884)
chr4 (10-50)||(1408285-1408325)
chr4 (20-96)||(8705017-8705093)
chr4 (6-82)||(34430630-34430706)
chr4 (10-54)||(52172790-52172834)
[»] chr3 (31 HSPs)
chr3 (5-99)||(21367728-21367822)
chr3 (20-93)||(18405752-18405825)
chr3 (12-98)||(39980797-39980883)
chr3 (5-81)||(402475-402551)
chr3 (10-49)||(54837000-54837039)
chr3 (16-94)||(584118-584196)
chr3 (33-99)||(25447160-25447226)
chr3 (5-46)||(38902127-38902168)
chr3 (5-93)||(5436133-5436221)
chr3 (11-91)||(31365111-31365191)
chr3 (5-92)||(46886614-46886701)
chr3 (9-55)||(22203495-22203540)
chr3 (14-94)||(24085258-24085338)
chr3 (5-57)||(26878178-26878230)
chr3 (11-91)||(31365232-31365312)
chr3 (5-57)||(37389244-37389296)
chr3 (10-53)||(24624275-24624318)
chr3 (8-55)||(30668928-30668975)
chr3 (17-56)||(43046738-43046777)
chr3 (10-53)||(45541636-45541679)
chr3 (11-96)||(20257603-20257689)
chr3 (9-55)||(34637944-34637990)
chr3 (9-98)||(10277261-10277350)
chr3 (11-56)||(26911652-26911697)
chr3 (5-82)||(34610738-34610815)
chr3 (11-95)||(20880543-20880627)
chr3 (5-57)||(28240378-28240430)
chr3 (11-51)||(30443960-30444000)
chr3 (21-96)||(42799884-42799960)
chr3 (10-97)||(49605768-49605856)
chr3 (12-48)||(52267476-52267512)
[»] chr8 (25 HSPs)
chr8 (11-95)||(10758176-10758260)
chr8 (11-94)||(40859703-40859785)
chr8 (15-96)||(30251372-30251453)
chr8 (11-82)||(35534545-35534616)
chr8 (11-57)||(26771332-26771378)
chr8 (9-82)||(1058009-1058082)
chr8 (11-96)||(38648418-38648503)
chr8 (15-91)||(28763439-28763515)
chr8 (5-57)||(32840943-32840995)
chr8 (11-98)||(36963270-36963357)
chr8 (11-96)||(15180607-15180691)
chr8 (20-93)||(43717855-43717928)
chr8 (10-54)||(12972923-12972967)
chr8 (16-96)||(43045643-43045723)
chr8 (10-57)||(27754469-27754516)
chr8 (9-56)||(29168015-29168062)
chr8 (9-98)||(922322-922412)
chr8 (15-96)||(38602400-38602479)
chr8 (38-91)||(6525911-6525964)
chr8 (10-51)||(10722689-10722730)
chr8 (13-57)||(6881996-6882040)
chr8 (5-96)||(14280339-14280431)
chr8 (67-95)||(26717350-26717378)
chr8 (31-95)||(29818863-29818927)
chr8 (15-95)||(41589657-41589737)
[»] chr6 (20 HSPs)
chr6 (5-96)||(34910327-34910418)
chr6 (9-96)||(848054-848140)
chr6 (5-88)||(2455052-2455132)
chr6 (10-98)||(31624323-31624414)
chr6 (11-50)||(30926586-30926625)
chr6 (13-54)||(26559200-26559241)
chr6 (5-57)||(9559379-9559431)
chr6 (10-53)||(769203-769246)
chr6 (12-95)||(10645304-10645387)
chr6 (6-88)||(2455321-2455403)
chr6 (12-89)||(28776642-28776720)
chr6 (12-89)||(28798346-28798424)
chr6 (11-57)||(30536570-30536616)
chr6 (5-50)||(9559503-9559548)
chr6 (5-50)||(13907646-13907691)
chr6 (5-57)||(9912148-9912200)
chr6 (10-50)||(27595532-27595572)
chr6 (5-57)||(31813222-31813274)
chr6 (9-53)||(32976042-32976086)
chr6 (18-54)||(34009460-34009496)
[»] chr2 (45 HSPs)
chr2 (9-93)||(42419858-42419942)
chr2 (5-96)||(4606986-4607077)
chr2 (5-95)||(2416374-2416464)
chr2 (11-95)||(15757577-15757661)
chr2 (10-53)||(5902511-5902554)
chr2 (29-95)||(3312162-3312228)
chr2 (10-96)||(42659129-42659215)
chr2 (11-72)||(7035509-7035570)
chr2 (11-55)||(5745744-5745788)
chr2 (5-96)||(7928216-7928308)
chr2 (11-95)||(23974412-23974496)
chr2 (11-95)||(30331818-30331902)
chr2 (5-89)||(36534829-36534913)
chr2 (17-93)||(44590097-44590173)
chr2 (5-96)||(44119843-44119934)
chr2 (5-94)||(40682312-40682404)
chr2 (9-95)||(41812011-41812097)
chr2 (5-82)||(750731-750808)
chr2 (11-57)||(43279484-43279532)
chr2 (5-57)||(16451179-16451231)
chr2 (9-57)||(41293120-41293168)
chr2 (14-53)||(12313135-12313174)
chr2 (14-101)||(27317449-27317536)
chr2 (9-48)||(28677626-28677665)
chr2 (10-53)||(32837388-32837431)
chr2 (10-45)||(40776067-40776102)
chr2 (10-53)||(40943978-40944021)
chr2 (14-96)||(15305744-15305826)
chr2 (11-57)||(24100995-24101041)
chr2 (10-96)||(31744364-31744450)
chr2 (11-57)||(41851602-41851648)
chr2 (9-82)||(449912-449985)
chr2 (21-98)||(2142731-2142808)
chr2 (8-57)||(18066192-18066241)
chr2 (45-98)||(18179050-18179103)
chr2 (11-96)||(26202095-26202180)
chr2 (15-95)||(36125432-36125510)
chr2 (26-95)||(39073621-39073690)
chr2 (9-98)||(43036621-43036710)
chr2 (10-47)||(44606078-44606115)
chr2 (69-97)||(14209326-14209354)
chr2 (5-96)||(26143560-26143649)
chr2 (10-54)||(27699490-27699534)
chr2 (10-50)||(32106764-32106804)
chr2 (14-46)||(43529827-43529859)
[»] chr7 (30 HSPs)
chr7 (11-96)||(19302481-19302566)
chr7 (12-98)||(28691752-28691838)
chr7 (11-72)||(19022527-19022588)
chr7 (9-96)||(5947306-5947393)
chr7 (14-96)||(4970710-4970792)
chr7 (15-57)||(27288018-27288060)
chr7 (5-99)||(34035978-34036072)
chr7 (5-95)||(44989597-44989686)
chr7 (18-83)||(21196342-21196407)
chr7 (11-80)||(34744095-34744164)
chr7 (15-55)||(21568454-21568494)
chr7 (40-96)||(44822054-44822110)
chr7 (15-82)||(46280212-46280282)
chr7 (26-93)||(18765366-18765433)
chr7 (9-96)||(48470109-48470196)
chr7 (15-57)||(14768395-14768437)
chr7 (15-57)||(22940013-22940055)
chr7 (5-54)||(17248613-17248662)
chr7 (6-55)||(20526888-20526937)
chr7 (9-50)||(23214919-23214960)
chr7 (11-96)||(33128819-33128903)
chr7 (10-98)||(41040230-41040319)
chr7 (28-93)||(45338537-45338602)
chr7 (10-54)||(946793-946837)
chr7 (9-53)||(3836645-3836689)
chr7 (13-53)||(6633932-6633972)
chr7 (11-95)||(11619077-11619161)
chr7 (5-57)||(33678841-33678893)
chr7 (13-53)||(40009544-40009584)
chr7 (17-57)||(48140276-48140316)
[»] scaffold0057 (1 HSPs)
scaffold0057 (9-56)||(24686-24733)


Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 7941663 - 7941860
Alignment:
Q  1 ttcggaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagactg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7941663 ttcggaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagactg 7941762  T
Q  101 tatgtaataacaatatttcacctcaaaggcatatttggaccaatttaattacaaacaatcaattatatactatttgtgtcagtgttgtatcaggtatc 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7941763 tatgtaataacaatatttcacctcaaaggcatatttggaccaatttaattacaaacaatcaattctatactatttgtgtcagtgttgtatcaggtatc 7941860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 2295163 - 2295248
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||| | |  || |||||| ||||||||| ||||| |||||||    
T  2295163 tgtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgccagtagataagctcaaataagccaattcaaacag 2295248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 37617468 - 37617384
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||| |||  |  ||||||||||||||||  |||||||||||    
T  37617468 tgtcaaaagctgttttcataaattctcgcaaacagtctcacaaaacttacggcaatagataaactcaaataagtcaatccaaaca 37617384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 38001663 - 38001733
Alignment:
Q  12 gtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    |||||||||||||||||||| |||| |||||||||||||||||||| | || ||  |||||||||||||||    
T  38001663 gtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgtcagttgataaactcaaataa 38001733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 1432576 - 1432664
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaa 93  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||||||||| | | ||  |  ||||| ||||||||| ||||||||||    
T  1432576 gaacaatgtcatacgctattttcataagttcttccaaacagtctcacaaaatttatgtcggtggataagctcaaataagccaatccaaa 1432664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 50644258 - 50644174
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    |||| |||| ||||||||||| |||| |||||||||||||||||||  | ||||| |||||| |||||||||  |||||||||||    
T  50644258 tgtcgtaagttgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaataagtcaatccaaaca 50644174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 10233653 - 10233606
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaac 56  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  10233653 aatgtcataagctgttttcataagttcttccaaacagtcttacaaaac 10233606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 3887641 - 3887589
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || ||||||||    
T  3887641 gaacaatgtcataagatgttttcataagttcttccaaacagccttacaaaact 3887589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 7069477 - 7069553
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaata 81  Q
    |||||||| ||||||||||||| |||| |||||||||| ||||| |||||||| |  |||| |||||| ||||||||    
T  7069477 gaacaatggcataagctgttttgataagttcttccaaatagtcttacaaaactaattttagtagataagctcaaata 7069553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 7119939 - 7119895
Alignment:
Q  13 tcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||    
T  7119939 tcataagttgttttcataaattcttgcaaacagtctcacaaaact 7119895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 3234014 - 3233932
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacaga 97  Q
    ||||| ||||||||||| |||| || ||||||||||||||||| |||  |  |||||| |||||||||  |||||||||||||    
T  3234014 ataagttgttttcataagttctccctaacagtctcacaaaacttacggcactagataagctcaaataagtcaatccaaacaga 3233932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 5720992 - 5721074
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaa 93  Q
    ||||||||||||||||||||| |||| ||||||||||  |||||||| | |  || || ||| ||||||||| ||||||||||    
T  5720992 tgtcataagctgttttcataagttctcccaaacagtccaacaaaacttatgcaagtagttaagctcaaataagccaatccaaa 5721074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 38247397 - 38247479
Alignment:
Q  14 cataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||||||||||| |||| |||||||||  ||||||||| | |  || ||||||  |||||||| |||||||||||||    
T  38247397 cataagctgttttcataagttctcccaaacagtgacacaaaacttatgccagtagataagttcaaataacccaatccaaacag 38247479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 49938814 - 49938860
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  49938814 tgtcataagctgttttcataagttctcccaaacaatctcacaaaact 49938860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 33186373 - 33186458
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||| | |||||||||| |||| | | |||||||||||||||| | |  | | ||||||||||||||| |||||||||||||    
T  33186373 tgtcataaccagttttcataagttctcctagacagtctcacaaaacttatgccaacggataaactcaaataagccaatccaaacag 33186458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 27145745 - 27145693
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||||||||||||||  |||||| ||| |||||||||| ||||||||||||||    
T  27145745 gaacaatgtcataagtcgttttcttaagttcttccaaaaagtctcacaaaact 27145693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 36514684 - 36514608
Alignment:
Q  6 aacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    |||||||||||||| | ||||||||| |||| || |||||||||| |||||| | |  || ||||||||||||||||    
T  36514684 aacaatgtcataagttattttcataagttctccctaacagtctcaaaaaacttatggcagtagataaactcaaataa 36514608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 489254 - 489345
Alignment:
Q  8 caatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagact 99  Q
    |||||||||||| ||||||||||| || ||| ||||||||| |||||| | | ||||| |||||| || ||||||  |||| |||| |||||    
T  489254 caatgtcataagttgttttcataagtttttctaaacagtcttacaaaaattatgttagtagataatctgaaataagtcaatacaaatagact 489345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 4445773 - 4445816
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    |||| |||||||| ||||||||||||| ||||||||||||||||    
T  4445773 atgttataagctgctttcataaattctcccaaacagtctcacaa 4445816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 6557039 - 6557110
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    ||||||||||| ||||||||| ||||  |||| |||||||||||||| | ||||| ||||||  ||||||||    
T  6557039 tgtcataagctattttcataagttctctcaaatagtctcacaaaacttatgttagtagataagttcaaataa 6557110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 9572100 - 9572061
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaa 54  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  9572100 ataagctgttttcataagttctcccaaacagtctcacaaa 9572061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 24915056 - 24915009
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaac 56  Q
    ||||||||||| |||||||||||||| | |||||||| ||||||||||    
T  24915056 aatgtcataagttgttttcataaattgtcccaaacagcctcacaaaac 24915009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 27820205 - 27820156
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    ||||||||| ||||||| |||||||||||||| | ||||||||||||||||    
T  27820205 gaacaatgtaataagct-ttttcataaattctccaaaacagtctcacaaaa 27820156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 37517169 - 37517123
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||||| ||| ||||| || ||||||||||||||||    
T  37517169 tgtcataagctgttttcgtaagttctttcatacagtctcacaaaact 37517123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 10666786 - 10666834
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaa 54  Q
    ||||||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  10666786 gaacaatgtcataggct-ttttcatcagttcttccaaacagtctcacaaa 10666834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 13810065 - 13810150
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||| |||| ||||||| ||||   ||| |||||||||||||| |||| || |||||| | ||||||| |||||||| ||||    
T  13810065 tgtcataaactgtattcataagttctctaaaagagtctcacaaaacttacgtcagtagataagcacaaataagccaatccatacag 13810150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 14576657 - 14576572
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||||||||||| || || | |||||||||  ||||||| | | |  || |||||| ||||||||| |||||||||||||    
T  14576657 tgtcataagctgttttcacaagttgtcccaaacagtgccacaaaatttaagccagtagataagctcaaataagccaatccaaacag 14576572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 39976219 - 39976142
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    ||||||||||||||  | ||||||||| ||||  |||||||| |||||||||| | || || |||||| |||||||||    
T  39976219 gaacaatgtcataaattattttcataagttctctcaaacagtttcacaaaacttatgtcagtagataatctcaaataa 39976142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 50725269 - 50725314
Alignment:
Q  7 acaatgtcataagctgttttcataaattcttccaaacagtctcaca 52  Q
    |||||||||||||||| |||||||| ||||  ||||||||||||||    
T  50725269 acaatgtcataagctgctttcataagttctgtcaaacagtctcaca 50725314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 51929542 - 51929501
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcaca 52  Q
    ||||||||||||||||||| |||||| ||||||| |||||||    
T  51929542 tgtcataagctgttttcatgaattctcccaaacaatctcaca 51929501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 27146264 - 27146212
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||| ||||| | ||| |||||||||  ||||||||||||||    
T  27146264 gaacaatgtcataagttgtttccttaagttcttccaacaagtctcacaaaact 27146212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 29904821 - 29904889
Alignment:
Q  14 cataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    ||||||||||||| |||| ||||  ||||||||||||||||||| | |  || |||||| |||||||||    
T  29904821 cataagctgtttttataagttctctcaaacagtctcacaaaacttatgcaagtagataagctcaaataa 29904889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 31284027 - 31283987
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctca 50  Q
    |||||||||| |||||||||||||  |||||||||||||||    
T  31284027 atgtcataagttgttttcataaatgtttccaaacagtctca 31283987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 33204382 - 33204326
Alignment:
Q  26 tcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    |||||| |||| |||||||||||||||||||| | || || |||||| |||||||||    
T  33204382 tcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctcaaataa 33204326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 51695504 - 51695456
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    ||||||||| ||||| |||||  |||| |||||||||||||||||||||    
T  51695504 gaacaatgtgataagttgtttatataagttcttccaaacagtctcacaa 51695456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 3e-22; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 16937886 - 16937801
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| | | ||| |||||| ||||||||| |||||||||||||    
T  16937886 tgtcataagctgttttcataagttcttccaaacactctcacaaaacttatgctagtagataagctcaaataagccaatccaaacag 16937801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 10640018 - 10640105
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||||||||||| |||| ||||||| | |||||||||| | || || |||||||||||||||| | |||||||||||    
T  10640018 aatgtcataagctgttttcataagttctcccaaacaatatcacaaaacttatgtcagtagataaactcaaataagctaatccaaacag 10640105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 11064727 - 11064814
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaa 92  Q
    ||||||||||||||||| ||||||||| ||||  |||||| |||||||||||| | ||| | ||||||||||||||||| ||||||||    
T  11064727 gaacaatgtcataagctattttcataagttctctcaaacaatctcacaaaacttatgttggtagataaactcaaataaatcaatccaa 11064814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 35445848 - 35445776
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    |||| ||||||||||||||||||||||  |||| |||||||||||||| | || || ||||||||||||||||    
T  35445848 atgttataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataa 35445776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 7674713 - 7674796
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaa 93  Q
    |||||||||| ||||| ||||| ||||||||| ||||||||||||||| | ||  | |||||| ||||||||| ||||||||||    
T  7674713 atgtcataagttgtttccataagttcttccaagcagtctcacaaaacttaagtaggtagataagctcaaataagccaatccaaa 7674796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 16457982 - 16457936
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  16457982 tgtcataagctgttttcataagttctcccaaacagtctcacaaaact 16457936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 12857341 - 12857257
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||| ||||||||||| |||| |  || ||| |||||||||| |||| |  |||||| ||||||||||||||||||||||    
T  12857341 tgtcataagttgttttcataagttctccggaaaagtttcacaaaacttacgtcaatagataagctcaaataaaccaatccaaaca 12857257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 12857708 - 12857624
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||| ||||||||||| |||| |  |||||| |||||||||| |||| |  |||| | ||||||||||||||||||||||    
T  12857708 tgtcataagttgttttcataagttctccggaacagtttcacaaaacttacgtcaatagatgagctcaaataaaccaatccaaaca 12857624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 29925902 - 29925954
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||| ||||||||||||||||||||| |||| |||||| |||||||||||||    
T  29925902 gaacattgtcataagctgttttcataagttctcccaaacggtctcacaaaact 29925954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 32009760 - 32009844
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||| ||||||||||||||| || ||||||| |||||||||||||| | || | |||||| |||||||||   |||||||||||    
T  32009760 tgtcacaagctgttttcataagtttttccaaatagtctcacaaaacttaggtcaacagatagactcaaatatgtcaatccaaaca 32009844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 9107157 - 9107240
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaac 94  Q
    |||| |||||||||||||| | |||| ||||||| |||||||||||| | || |  ||||||||||||||||  ||||||||||    
T  9107157 tgtcctaagctgttttcatgagttctcccaaacattctcacaaaacttatgtcactagataaactcaaataagtcaatccaaac 9107240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 41535442 - 41535533
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||| ||||||||||| |||| |||||| || |||||||||| |  | || |||||| || |||||| ||||||| |||||    
T  41535442 gaacaatgtcataagttgttttcataagttctcccaaactgtttcacaaaactgatataagtagataagcttaaataagccaatccgaacag 41535533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 15246899 - 15246985
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||| || |||||||| |||| ||||||| ||| | |||||| | || || |||||| ||||||||||| |||||||||||    
T  15246899 atgtcataagttgctttcataagttctcccaaacattctaataaaacttatgtcagtagataagctcaaataaacaaatccaaacag 15246985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 32859725 - 32859679
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||    
T  32859725 aatgtcgtaagttgttttcataaattcttccaaacagtgtcacaaaa 32859679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 32861897 - 32861851
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||    
T  32861897 aatgtcgtaagttgttttcataaattcttccaaacagtgtcacaaaa 32861851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 32862681 - 32862635
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||||    
T  32862681 aatgtcgtaagttgttttcataaattcttccaaacagtgtcacaaaa 32862635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 41419380 - 41419470
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    |||||||||||||||||||||||| || || | ||||||| |||||||||| | | || || |||| | |||||||||  |||||||||||    
T  41419380 gaacaatgtcataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataagtcaatccaaaca 41419470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 7706001 - 7705916
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||||||||| |||| ||||| ||  |||||||||| | | ||| |||||  |||||||||  ||||||||||||    
T  7706001 tgtcataagctgttttcataagttctcccaaagagcgtcacaaaacttatgctagtagatatgctcaaataagtcaatccaaacag 7705916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 34736531 - 34736446
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||| |||||| |||| || |||| |||||| ||||||||||||| | || | ||||||| |||||||||  |||||||||||    
T  34736531 atgtcattagctgtgttcaaaagttctcccaaactgtctcacaaaacttatgtcaccagataagctcaaataagtcaatccaaaca 34736446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 39105525 - 39105562
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaa 42  Q
    |||||||||||||||||||||||||||||||| |||||    
T  39105525 gaacaatgtcataagctgttttcataaattctcccaaa 39105562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 39248166 - 39248211
Alignment:
Q  12 gtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||    
T  39248166 gtcataagctgtttttataagttctcccaaacagtctcacaaaact 39248211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 41981710 - 41981660
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||  ||||||||||||| |||| ||||||||||||||||||||    
T  41981710 gaacaatgtcat--gctgttttcataagttctcccaaacagtctcacaaaact 41981660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 32942659 - 32942707
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||| |||||||||||| ||||||||||  ||||||||    
T  32942659 aatgtcataagctgtattcataaattctcccaaacagtcaaacaaaact 32942707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 39155005 - 39154961
Alignment:
Q  13 tcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||    
T  39155005 tcataagctgttttcataacttctcccaaactgtctcacaaaact 39154961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 2568723 - 2568762
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctc 49  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  2568723 atgtcataagctgttttcataagttcttctaaacagtctc 2568762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 11700223 - 11700313
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||||||||| ||||| ||||| ||||   |||||||||||||||||| | |  ||  ||||| ||||||||| | ||||||||||    
T  11700223 gaacaatgtcataagttgtttccataagttctgtgaaacagtctcacaaaacttatgccagtggataagctcaaataagcaaatccaaaca 11700313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 17560214 - 17560172
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||||||||||||||||  ||||||||||||| ||||||||||    
T  17560214 ataagctgttttcataagctcttccaaacagtgtcacaaaact 17560172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 38034028 - 38033990
Alignment:
Q  14 cataagctgttttcataaattcttccaaacagtctcaca 52  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  38034028 cataagctgttttaataacttcttccaaacagtctcaca 38033990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 3520645 - 3520690
Alignment:
Q  12 gtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||||||| ||||||||||| |||| ||||||||||||||| ||||    
T  3520645 gtcataagatgttttcataagttctcccaaacagtctcacacaact 3520690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 1465026 - 1464938
Alignment:
Q  8 caatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||| |||||||||||||||||| |||| || ||||||||| || |||| | | ||| || ||| |||||||||  |||| |||||||    
T  1465026 caatgccataagctgttttcataagttctcccgaacagtctcgcagaacttatgctagaagctaagctcaaataagtcaattcaaacag 1464938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 1773101 - 1773024
Alignment:
Q  17 aagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||| |||| |||  ||||||||||||||| | |  || |||||| || |||||| |||||||||||||    
T  1773101 aagctgttttcataagttctccca--cagtctcacaaaacttatggaagtagataagctaaaataagccaatccaaacag 1773024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 6096608 - 6096660
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||| ||||||||| | ||| ||||||| || ||||||||||||||    
T  6096608 gaacaatgtcacaagctgtttacgtaagttcttcctaaaagtctcacaaaact 6096660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 6593371 - 6593407
Alignment:
Q  17 aagctgttttcataaattcttccaaacagtctcacaa 53  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  6593371 aagctgttttcataaattctcccaaatagtctcacaa 6593407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 12433179 - 12433131
Alignment:
Q  8 caatgtcataagctgttttcataaattcttccaaacagtctcacaaaac 56  Q
    ||||||| |||||| ||||||||| |||| ||||||| |||||||||||    
T  12433179 caatgtcgtaagctattttcataacttctcccaaacaatctcacaaaac 12433131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 14422578 - 14422618
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctca 50  Q
    ||||||||| || ||||||||||||||| ||||||||||||    
T  14422578 atgtcataaactattttcataaattctttcaaacagtctca 14422618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 15015922 - 15015986
Alignment:
Q  23 ttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaa 87  Q
    ||||||||| |||| ||||||||||||||||| || | || || |||||| ||||||||| ||||    
T  15015922 ttttcataagttctcccaaacagtctcacaaagcttatgtcagtagataagctcaaataagccaa 15015986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 3e-22; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 13126581 - 13126492
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||| | ||||| || ||| || |||||| |||||||||||||||    
T  13126581 aatgtcataagctgtttttataagttcttccaaacagtctcacaaaacttatgttagtaggtaagctaaaataagccaatccaaacagac 13126492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 52315202 - 52315112
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagact 99  Q
    ||||| ||||| |||||| |||| |||||||||||| |||||||||||| |||| || ||||||||||||||||  ||||||||| |||||    
T  52315202 aatgtgataagttgttttgataagttcttccaaacaatctcacaaaacttacgtcagtagataaactcaaataagtcaatccaaagagact 52315112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 21731655 - 21731574
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||||| |||| ||||||| |||||||||||| | || || |||||  |||||||||||||||||||||||    
T  21731655 ataagctgttttcataagttctcccaaacaatctcacaaaacttatgtcagtagatatgctcaaataaaccaatccaaacag 21731574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 49940165 - 49940085
Alignment:
Q  16 taagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||||||||| ||||  ||||||||||||||||||| | |||||||| ||| |||||||||  ||||||||||||    
T  49940165 taagctgttttcataagttctctcaaacagtctcacaaaacttatgttagcaggtaagctcaaataagtcaatccaaacag 49940085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 55437137 - 55437228
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||| |||||||| ||||||||||| ||||| |||||| | |||||||||| | |  || |||||||||||||||| |||||||||||||    
T  55437137 gaacaacgtcataagttgttttcataagttctttcaaacaatttcacaaaacttatggcagtagataaactcaaataagccaatccaaacag 55437228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 40174633 - 40174702
Alignment:
Q  20 ctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatc 89  Q
    |||||||||||| || | |||||||||||||||||||| | ||||| ||||||||||||||||| |||||    
T  40174633 ctgttttcataagttatcccaaacagtctcacaaaacttatgttagtagataaactcaaataaatcaatc 40174702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 54426110 - 54426195
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||||| ||| |||| |||| ||||||||||||||| | |  || |||||| ||||||||| |||||||||||||    
T  54426110 tgtcataagctgttttcctaagttctcccaagcagtctcacaaaacttatgccagtagataagctcaaataagccaatccaaacag 54426195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 27043830 - 27043746
Alignment:
Q  14 cataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    |||||||| ||| ||||| |||||||||||||| |||||||||| | || || |||||| |||||||||  ||||||||||||||    
T  27043830 cataagctatttgcataacttcttccaaacagtttcacaaaacttatgtcagtagataagctcaaataagtcaatccaaacagac 27043746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 41336827 - 41336911
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||||||||||| ||| ||||||| |||  |||||||||||| | || || ||||||||||||||||  |||||||||||    
T  41336827 tgtcataagctgttttcttaagttcttcctaactatctcacaaaacttatgtgagtagataaactcaaataagtcaatccaaaca 41336911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 49939960 - 49939868
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacaga 97  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||||||| || | | ||| |||||| || |||||| |||||  |||||||    
T  49939960 gaacaatgtcataagctcttttcataagttcttccaaatagtctcacaaagcttatgctagtagataagcttaaataagccaattgaaacaga 49939868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 2244118 - 2244205
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    |||||||||||||||| | ||||||| ||||||||| ||| |||||| | || || ||||||||||  ||||| ||||||||||||||    
T  2244118 tgtcataagctgtttttaaaaattctcccaaacagtttcaaaaaacttatgtcagtagataaactcggataaatcaatccaaacagac 2244205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 15173306 - 15173223
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaac 94  Q
    ||||||||||| |||||||||| ||| |||||||||||||||||||| | || || ||||||  ||||||||  ||||||||||    
T  15173306 tgtcataagctattttcataaagtctcccaaacagtctcacaaaacttatgtcagtagataagttcaaataagtcaatccaaac 15173223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 1706683 - 1706757
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaa 79  Q
    |||||||| |||||||||||||||||| ||||  ||||| ||||||||||||| | || || |||||||||||||    
T  1706683 gaacaatgccataagctgttttcataatttctctcaaaccgtctcacaaaacttatgtcagtagataaactcaaa 1706757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 21523622 - 21523668
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  21523622 aatgtcataagttgttttcataaattcttccaaacagtgtcacaaaa 21523668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 20719765 - 20719834
Alignment:
Q  6 aacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaact 75  Q
    |||||||||||||||||||||| ||| |||||||||| |||| ||||||||| | | ||| |||||||||    
T  20719765 aacaatgtcataagctgttttcttaagttcttccaaatagtcgcacaaaacttatgctagtagataaact 20719834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 23819154 - 23819198
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaa 54  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  23819154 atgtcataagctgttttcttaaactcttccaaacagtctcacaaa 23819198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 29774305 - 29774392
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||| |||||||| ||||||||| |||| | |||||||||||||||||||  || || | ||||||||||||||  || |||||||||    
T  29774305 aatgacataagctattttcataagttctcctaaacagtctcacaaaactctagtcagtaaataaactcaaataagtcattccaaacag 29774392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 39603173 - 39603127
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  39603173 tgtcataagctgttttcctaagttctcccaaacagtctcacaaaact 39603127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 35571640 - 35571547
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    ||||| ||| |||||||||||| | || |||| ||||||  || ||||||||| | | ||| |||||| ||||||||| |||||||||||||||    
T  35571640 gaacagtgtaataagctgtttttaaaagttctcccaaactatcccacaaaacttatgctagtagataagctcaaataagccaatccaaacagac 35571547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 39691148 - 39691067
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||  ||||||||||  ||||||||||||||||||| | | ||| |||||| |||||||||  |||| |||||||    
T  39691148 ataagctgttcccataaattctctcaaacagtctcacaaaacttatgctagtagataagctcaaataagtcaattcaaacag 39691067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 437167 - 437083
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||| ||||||||||| || | ||||| |||||||||||| | | | ||  |||||  ||||||||||||||||||||||    
T  437167 tgtcataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 437083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 49202706 - 49202758
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||| |||| ||| ||| |||| |||||||||||||||||||||||||    
T  49202706 gaacaatgtgataatctggttttataagttcttccaaacagtctcacaaaact 49202758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 56249588 - 56249636
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||||||||||||||||| |||| || ||||||||| ||||||||||||    
T  56249588 aatgtcataagctgttttgataagttgttccaaacaatctcacaaaact 56249636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 17822870 - 17822783
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||||||||||  |||| | ||| ||||||||| |||| | || || |||||| |||||||||   |||||||||||    
T  17822870 aatgtcataagctgttttcatatgttctcctaaatagtctcacagaacttatgtcagtagataagctcaaataagttaatccaaacag 17822783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 26590373 - 26590330
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaa 54  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||    
T  26590373 tgtcataaattgttttcataaattcttccaagcagtctcacaaa 26590330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 18815093 - 18815175
Alignment:
Q  14 cataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||| || || | ||||  ||||||||||||||||||| | | ||| || ||| ||||||||| |||||||||||||    
T  18815093 cataagctgtctttattagttctctcaaacagtctcacaaaacttatgctagtaggtaagctcaaataagccaatccaaacag 18815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 22030270 - 22030316
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||||||||| |||| ||||| || |||||||||||    
T  22030270 tgtcataagctgttttcataagttctcccaaataggctcacaaaact 22030316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 22662074 - 22662148
Alignment:
Q  8 caatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    ||||||||||| ||| |||||||| |||  |||||||||||||| ||||| |||| || |||||| |||| ||||    
T  22662074 caatgtcataaactgatttcataagttcccccaaacagtctcactaaacttacgtcagtagataagctcagataa 22662148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 22666553 - 22666627
Alignment:
Q  8 caatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    ||||||||||| ||| |||||||| |||  |||||||||||||| ||||| |||| || |||||| |||| ||||    
T  22666553 caatgtcataaactgatttcataagttcccccaaacagtctcactaaacttacgtcagtagataagctcagataa 22666627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 24169328 - 24169414
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||||||| |||| | || ||||  |||| |||||||||||||| | |  || |||||||||| ||||| ||||||||||||    
T  24169328 aatgtcataagctatttttaaaagttctctcaaatagtctcacaaaacttatgccagtagataaactctaataagccaatccaaaca 24169414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 25904228 - 25904182
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    |||| ||||||||||||||||||  ||| ||||||||||||||||||    
T  25904228 aatggcataagctgttttcataagctctcccaaacagtctcacaaaa 25904182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 47118974 - 47118928
Alignment:
Q  6 aacaatgtcataagctgttttcataaattcttccaaacagtctcaca 52  Q
    ||||||||||| || ||||||||||| ||||||||| ||||||||||    
T  47118974 aacaatgtcatgagttgttttcataagttcttccaagcagtctcaca 47118928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 26868 - 26783
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||||||||| ||||   ||||||||| ||||| || | |  ||  ||||| ||||||||| |||||||||||||    
T  26868 tgtcataagctgttttcataatttctcggaaacagtctaacaaagcttatgccagttgataagctcaaataagccaatccaaacag 26783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 23459693 - 23459782
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagact 99  Q
    |||||||||||| ||||||||| |||| | ||||||||| || | ||| | | ||| |||||| ||||||||  ||||||||||| ||||    
T  23459693 atgtcataagcttttttcataagttctccgaaacagtcttaccatacttatgctagtagataagctcaaatatgccaatccaaaccgact 23459782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 42404025 - 42403941
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||||||||||| ||||||| ||||| || | ||||||||| | || ||  ||||| |||||||||  ||||||||||||    
T  42404025 tgtcataagctgttttcagaaattctcccaaatag-cacacaaaacttatgtcagttgataagctcaaataagtcaatccaaacag 42403941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 49003884 - 49003807
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    ||||||||||||| ||| ||||||||  |||| |||||| || |||||||||| |||| ||  ||||| |||||||||    
T  49003884 gaacaatgtcatacgctcttttcatattttctcccaaaccgtttcacaaaacttacgtcagtggataagctcaaataa 49003807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 1408325 - 1408285
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctca 50  Q
    |||| ||||||||||||||||||||||  ||||||||||||    
T  1408325 atgtaataagctgttttcataaattctctcaaacagtctca 1408285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 8705017 - 8705093
Alignment:
Q  20 ctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||| |||| |||| |||| ||||||||||||||| | || |  |||||| ||||||| | |||||||||||||    
T  8705017 ctgtttttataagttctcccaatcagtctcacaaaacttatgtcaatagataagctcaaatgagccaatccaaacag 8705093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 34430706 - 34430630
Alignment:
Q  6 aacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    ||||||||| ||||||||||| |||| ||||||| ||||||  ||||||||| | | ||| | |||| |||||||||    
T  34430706 aacaatgtcttaagctgtttttataagttcttccgaacagttgcacaaaacttatgctagtaaataagctcaaataa 34430630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 52172790 - 52172834
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaa 54  Q
    |||||||||||||||||||||| || | || ||||||||||||||    
T  52172790 atgtcataagctgttttcataagttttccccaacagtctcacaaa 52172834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 21367728 - 21367822
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagact 99  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||||||| | | | | |||||| ||||||||| |||||||||| |||||    
T  21367728 gaacaatgtcataagctgttttcataagttctcccaaacagtcccacaaaacttatgctggtagataatctcaaataagccaatccaaagagact 21367822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 18405825 - 18405752
Alignment:
Q  20 ctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaa 93  Q
    |||||||||||| ||||| ||||||||||||||||||| | || || |||||| ||||||||||||||||||||    
T  18405825 ctgttttcataagttcttgcaaacagtctcacaaaacttatgtcagtagataagctcaaataaaccaatccaaa 18405752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 39980797 - 39980883
Alignment:
Q  12 gtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    |||||||||||||||||||| ||||   |||||||||||||||||| | | ||| |||||| |||||| || |||||||||||||||    
T  39980797 gtcataagctgttttcataagttctcttaaacagtctcacaaaacttatgctagtagataagctcaaacaagccaatccaaacagac 39980883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 402551 - 402475
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaata 81  Q
    ||||||||||||||||||||||||||  |||| |||||||||||  ||||||| | |||||  ||||||||||||||    
T  402551 gaacaatgtcataagctgttttcatacgttctcccaaacagtcttgcaaaacttatgttagttgataaactcaaata 402475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 54837039 - 54837000
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctc 49  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  54837039 atgtcataagctgttttcataaattcttccaaacagtctc 54837000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 584118 - 584196
Alignment:
Q  16 taagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaac 94  Q
    ||||||||||||||||||||| | ||||||||||||| |||| | | ||| |||||| |||||||||  ||||||||||    
T  584118 taagctgttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 25447226 - 25447160
Alignment:
Q  33 ttcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagact 99  Q
    ||||| ||||||||||||||||||| | || || ||||||||||||||||  |||||||||||||||    
T  25447226 ttcttgcaaacagtctcacaaaacttatgtcagtagataaactcaaataagtcaatccaaacagact 25447160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 38902127 - 38902168
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagt 46  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  38902127 gaacaatgtcatatgctgttttcataaattcttccaaacagt 38902168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 5436133 - 5436221
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaa 93  Q
    ||||||||||||||| |||||||| || |||||| ||||||| |||||||||| | |  ||  ||||||||||||||| ||||| ||||    
T  5436133 gaacaatgtcataagttgttttcagaagttcttcaaaacagtgtcacaaaacttatgacagttgataaactcaaataagccaatgcaaa 5436221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 31365191 - 31365111
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatcca 91  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||| | |  |  |||||| ||||||||| ||||||||    
T  31365191 tgtcataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctcaaataagccaatcca 31365111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 46886701 - 46886614
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaa 92  Q
    |||||||| |||||||||||||||| |  ||  |||||||||||| ||||| | | |  ||||||||| |||||||||||||||||||    
T  46886701 gaacaatgccataagctgttttcatcagctcacccaaacagtctctcaaaatttatgccagcagataagctcaaataaaccaatccaa 46886614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 22203495 - 22203540
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  22203495 aatgtcataagctgttttcataagttc-tccaaacagtctcacaaaa 22203540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 24085338 - 24085258
Alignment:
Q  14 cataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaac 94  Q
    |||||||||||||||||| |||| | || ||||||||||||||| | |   | |||||| ||||||||| |||||||||||    
T  24085338 cataagctgttttcataagttctccaaaccagtctcacaaaacttatgccggtagataagctcaaataagccaatccaaac 24085258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 26878178 - 26878230
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||||||||||| | || |||||| ||||||| ||||||||||||||||||||    
T  26878178 gaacaatgtcattaactattttcacaaattctcccaaacagtctcacaaaact 26878230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 31365312 - 31365232
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatcca 91  Q
    ||||||||||||| ||||||| |||| ||||||||| |||||||| | | |  |  |||||||||||||||| ||||||||    
T  31365312 tgtcataagctgtattcataagttctcccaaacagtgtcacaaaaattatgccaatagataaactcaaataagccaatcca 31365232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 37389244 - 37389296
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||| ||||||||||| |||| || || ||||||||||||||    
T  37389244 gaacaatgtcataagttgttttcataagttctcccgaagagtctcacaaaact 37389296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 24624275 - 24624318
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||    
T  24624275 atgtcataagctgttttcataagctcttccaaacagtcttacaa 24624318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 30668975 - 30668928
Alignment:
Q  8 caatgtcataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    |||||||||||| |||||||||||||| ||||||||| | ||||||||    
T  30668975 caatgtcataagttgttttcataaatttttccaaacaatttcacaaaa 30668928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 43046738 - 43046777
Alignment:
Q  17 aagctgttttcataaattcttccaaacagtctcacaaaac 56  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  43046738 aagctgttttcataagttctcccaaacagtctcacaaaac 43046777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 45541636 - 45541679
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||    
T  45541636 atgtcataagctgttttcataagttcttctaaacagtcttacaa 45541679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 20257603 - 20257689
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagat-aaactcaaataaaccaatccaaacag 96  Q
    |||||| ||||| |||||||| |||| |||||||||||||||||| | | |   | |||| |||||||||||| |||||||||||||    
T  20257603 tgtcattagctgctttcataagttctcccaaacagtctcacaaaatttatggctgtagataaaactcaaataagccaatccaaacag 20257689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 34637990 - 34637944
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    ||||| ||||||||||||||||| |||| ||||||| ||||||||||    
T  34637990 aatgttataagctgttttcataagttctcccaaacaatctcacaaaa 34637944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 10277350 - 10277261
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    ||||||||||||||||||||||  ||||   |||||||||| ||| ||||| | |||   |||| || |||||| |||||||||||||||    
T  10277350 aatgtcataagctgttttcatatgttctctgaaacagtctctcaagactcatgctaggtaataagcttaaataagccaatccaaacagac 10277261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 26911652 - 26911697
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaac 56  Q
    |||||||||||||||||||| ||| | |||||| ||||||||||||    
T  26911652 tgtcataagctgttttcatatattatcccaaacggtctcacaaaac 26911697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 34610815 - 34610738
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    |||||||||||||||| |||||||||| |||| ||||| |||   |||||||| | || || |||||| |||||||||    
T  34610815 gaacaatgtcataagcagttttcataagttctcccaaatagttgtacaaaacttatgtcagtagataagctcaaataa 34610738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 20880543 - 20880627
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||||||||||||||  |||| ||||| ||||| |  ||||| | |  || |||||| ||||||||| ||||||||||||    
T  20880543 tgtcataagctgttttcataggttctcccaaatagtctaaggaaacttatgcaagtagataagctcaaataagccaatccaaaca 20880627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 28240378 - 28240430
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||||||||||| ||| ||||   |||| |||||||||||||    
T  28240378 gaacaatgtcataagctgttttcctaagttctcttaaactgtctcacaaaact 28240430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 30443960 - 30444000
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcac 51  Q
    |||||||||||||||||||||  ||| ||||||||||||||    
T  30443960 tgtcataagctgttttcataagctctaccaaacagtctcac 30444000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 42799960 - 42799884
Alignment:
Q  21 tgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaa-ctcaaataaaccaatccaaacag 96  Q
    ||||||||||| |||| ||||| ||| |||||||||  | || || ||||||| ||||||||| |||||||||||||    
T  42799960 tgttttcataagttctcccaaagagtttcacaaaacatatgtcagtagataaagctcaaataagccaatccaaacag 42799884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 49605856 - 49605768
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaa-actcacgttagcagataaactcaaataaaccaatccaaacaga 97  Q
    |||||||||| ||||| ||| || |||  |||||| ||||||||  ||| | | ||| |||||||||||||||||| ||||||||||||    
T  49605856 atgtcataagttgtttccatgaactctctcaaacactctcacaagtacttatgctagaagataaactcaaataaactaatccaaacaga 49605768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 52267476 - 52267512
Alignment:
Q  12 gtcataagctgttttcataaattcttccaaacagtct 48  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  52267476 gtcataagctgttttcataaattcttcgaaatagtct 52267512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 3e-19; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 10758260 - 10758176
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||  ||||||||  |||| ||||||    
T  10758260 tgtcataagctgttttcataaattctatcaaacagtctcacaaaacttatgttagcagataagttcaaataagtcaattcaaaca 10758176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 40859785 - 40859703
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaac 94  Q
    ||||||||||||||||||||| | || | |||||| ||||||||||| | |||||||||||| ||||||||| |||||||||||    
T  40859785 tgtcataagctgttttcataagt-ctccaaaacagcctcacaaaacttatgttagcagataagctcaaataagccaatccaaac 40859703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 30251453 - 30251372
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||| ||| |||| |||||||||||||| ||||| | || || |||||| ||||||||| |||||||||||||    
T  30251453 ataagctgttttcgtaagttctcccaaacagtctcacgaaacttatgtcagtagataagctcaaataagccaatccaaacag 30251372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 35534616 - 35534545
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    |||||||||||||||||| || ||||  ||||||||||||||||||| | ||||| |||||| |||||||||    
T  35534616 tgtcataagctgttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaaataa 35534545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 26771332 - 26771378
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  26771332 tgtcataagctgttttcataagttctcccaaacagtctcacaaaact 26771378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 1058082 - 1058009
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    |||||||||||| ||||||| || |||| |||||||||||||||||||| | || || |||||| |||||||||    
T  1058082 aatgtcataagcagttttcaaaagttctcccaaacagtctcacaaaacttatgtaagtagataagctcaaataa 1058009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 38648418 - 38648503
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||| ||||||||||||||  ||| |||||||||||||||||||| | || || |||||| || |||||| ||||||| |||||    
T  38648418 tgtcatgagctgttttcataaggtctcccaaacagtctcacaaaacttatgtcagtagataatcttaaataagccaatcctaacag 38648503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 28763439 - 28763515
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatcca 91  Q
    ||||||||||||||||| |||| |||||||||||||||||||| | ||||  |||||| | | ||||||| ||||||    
T  28763439 ataagctgttttcataagttctcccaaacagtctcacaaaacttatgttactagataagcccgaataaactaatcca 28763515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 32840995 - 32840943
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||| ||||||||||| |||| |||||||||||| |||||||    
T  32840995 gaacaatgtcataagttgttttcataagttctcccaaacagtctcgcaaaact 32840943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 36963357 - 36963270
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    ||||| ||||||||||  ||| |||| |||||||||||||||||||| | |  || |||| | ||||||||| |||||||||||||||    
T  36963357 tgtcaaaagctgtttttgtaagttctcccaaacagtctcacaaaacttatgccagtagattagctcaaataagccaatccaaacagac 36963270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 15180607 - 15180691
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||| || ||||||||| ||||||| ||||| ||||||| |||||| | |  || |||||||||||||||| |||||||||||||    
T  15180607 tgtcaaaacctgttttcagaaattct-ccaaaaagtctcataaaacttatggcagtagataaactcaaataagccaatccaaacag 15180691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 43717928 - 43717855
Alignment:
Q  20 ctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaa 93  Q
    |||||||||||| |||| ||||| |||||||||||||| | || |  |||||| ||||||||| ||||||||||    
T  43717928 ctgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaataagccaatccaaa 43717855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 12972923 - 12972967
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaa 54  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||    
T  12972923 atgtcataagctgttttcataatatctcccaaacagtctcacaaa 12972967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 43045723 - 43045643
Alignment:
Q  16 taagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||||  ||| | ||||||||||||||| || | | ||| |||||| || |||||| |||||||||||||    
T  43045723 taagctgttttcataagatctccaaaacagtctcacaaatcttatgctagtagataagcttaaataagccaatccaaacag 43045643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 27754469 - 27754516
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||| |||||||||||| |||| ||||| ||||||||||||||    
T  27754469 atgtcataaactgttttcataagttctcccaaatagtctcacaaaact 27754516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 29168062 - 29168015
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaac 56  Q
    |||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  29168062 aatgtcataatctgtttttataagttctcccaaacagtctcacaaaac 29168015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 922412 - 922322
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa-accaatccaaacagac 98  Q
    |||||||| ||||||||  ||||||| | ||||||||| |||||||||| | || || | ||||||||||||||  | |||||||||||||    
T  922412 aatgtcatgagctgtttctataaattatcccaaacagtatcacaaaacttaggtcagtatataaactcaaataagtctaatccaaacagac 922322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 38602400 - 38602479
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||||  |||| |||| |||||||| ||||||||||| | || || |||||| |||||||||  ||||||||||||    
T  38602400 ataagctgttt--ataagttctcccaaacagcctcacaaaacttatgtcagtagataagctcaaataagtcaatccaaacag 38602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 6525911 - 6525964
Alignment:
Q  38 ccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatcca 91  Q
    |||||||||| ||||||||| | ||||| ||||||||||||||||  |||||||    
T  6525911 ccaaacagtcacacaaaacttatgttagtagataaactcaaataagacaatcca 6525964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 10722689 - 10722730
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcac 51  Q
    |||||||||||||||| |||||||||| ||||||| ||||||    
T  10722689 atgtcataagctgtttccataaattctcccaaacaatctcac 10722730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 6881996 - 6882040
Alignment:
Q  13 tcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||| |||||||||||||  |||| ||||||||||||||||||||    
T  6881996 tcatgagctgttttcataggttctcccaaacagtctcacaaaact 6882040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 14280431 - 14280339
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaa-ctcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||  |||||||||||||||  ||||||| || ||||||| || | |  || ||||||| ||||||||  ||||||||||||    
T  14280431 gaacaatgtcataaattgttttcataaattcacccaaacaatcacacaaaaacttatgccagtagataaaatcaaataagtcaatccaaacag 14280339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 95
Target Start/End: Original strand, 26717350 - 26717378
Alignment:
Q  67 agataaactcaaataaaccaatccaaaca 95  Q
    |||||||||||||||||||||||||||||    
T  26717350 agataaactcaaataaaccaatccaaaca 26717378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 29818927 - 29818863
Alignment:
Q  31 aattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    |||||| | |||||||||||||||||| | | ||| |||||| ||||||||  ||||||||||||    
T  29818927 aattctccgaaacagtctcacaaaacttatgatagtagataagctcaaatatgccaatccaaaca 29818863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 41589657 - 41589737
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||| ||||||||||| |||| | ||||||||||| ||| || | || || ||| || |||||||||||||||| |||||    
T  41589657 ataagttgttttcataagttctccaaaacagtctcaaaaagcttatgtcagtagacaagctcaaataaaccaatctaaaca 41589737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 34910418 - 34910327
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||||||||||||||  |||||||||||| |||| ||||||| |  | || |||||||||||||||| ||| |||||||||    
T  34910418 gaacaatgtcataagctgttttcatagtttcttccaaacaatctcccaaaactgatatcagtagataaactcaaataagccagtccaaacag 34910327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 848054 - 848140
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||||||| | | ||  |||||| |||||||||  ||||||||||||    
T  848054 aatgtcataagcagtttttataagttcttccaaacagtctcacaaaacttatgcta-tagataagctcaaataaggcaatccaaacag 848140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 2455052 - 2455132
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaat 88  Q
    |||||||||||||||   |||||| || |||| |||||||||||||||||||| | ||||| ||||||  ||||||||||||||    
T  2455052 gaacaatgtcataag---ttttcagaagttctcccaaacagtctcacaaaacttatgttagtagataagttcaaataaaccaat 2455132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 31624323 - 31624414
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaaa---ctcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||||   || | || || | |||| ||||||||| |||||||||||||||    
T  31624323 atgtcatgagctgttttcataaattctaccaaacagtctctcaaaacagcttatgtcagtatataagctcaaataagccaatccaaacagac 31624414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 30926586 - 30926625
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctca 50  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  30926586 tgtcataagctgttttcataagttcttccaaacagtctca 30926625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 26559241 - 26559200
Alignment:
Q  13 tcataagctgttttcataaattcttccaaacagtctcacaaa 54  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  26559241 tcataagttgttttcataagttcttccaaacagtctcacaaa 26559200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 9559431 - 9559379
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||||||||  |||||||||||||||| |||| | ||||||||||||||||||    
T  9559431 gaacaatgttgtaagctgttttcataacttctcctaaacagtctcacaaaact 9559379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 769203 - 769246
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||    
T  769203 atgtcataagatgttttcataagttcatccaaacagtctcacaa 769246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 10645387 - 10645304
Alignment:
Q  12 gtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    |||| ||| ||||||||||| |||| ||||||||||| |||||||| | || |  |||||| ||||||| | ||||||||||||    
T  10645387 gtcaaaagttgttttcataagttctcccaaacagtcttacaaaacttatgtcattagataacctcaaattagccaatccaaaca 10645304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 2455321 - 2455403
Alignment:
Q  6 aacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaat 88  Q
    |||||||| ||||| ||||||||||| ||||  |||| ||| |||| ||||| | ||| | |||||| |||||||||||||||    
T  2455321 aacaatgtaataagttgttttcataagttctctcaaatagtttcaccaaacttatgtttgtagataagctcaaataaaccaat 2455403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 28776642 - 28776720
Alignment:
Q  12 gtcataagctgttttcataaattcttccaaacagtctcacaaa-actcacgttagcagataaactcaaataaaccaatc 89  Q
    |||||||||||||| | |||| ||| ||||| |||||||||||  || ||||||| ||||||||||||| || ||||||    
T  28776642 gtcataagctgtttccttaaactctcccaaatagtctcacaaattcttacgttagtagataaactcaaagaagccaatc 28776720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 28798346 - 28798424
Alignment:
Q  12 gtcataagctgttttcataaattcttccaaacagtctcacaaa-actcacgttagcagataaactcaaataaaccaatc 89  Q
    |||||||||||||| | |||| ||| ||||| |||||||||||  || ||||||| ||||||||||||| || ||||||    
T  28798346 gtcataagctgtttccttaaactctcccaaatagtctcacaaattcttacgttagtagataaactcaaagaagccaatc 28798424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 30536570 - 30536616
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||| ||||||||| | || ||||||||||||||||||||    
T  30536570 tgtcataagctattttcataagtcctcccaaacagtctcacaaaact 30536616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 9559548 - 9559503
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctca 50  Q
    ||||||||||||||| ||||||||||| |||| ||||| |||||||    
T  9559548 gaacaatgtcataagttgttttcataagttctcccaaatagtctca 9559503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 13907646 - 13907691
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctca 50  Q
    ||||||||||| ||||||||||||||||||||  ||||| ||||||    
T  13907646 gaacaatgtcagaagctgttttcataaattctctcaaaccgtctca 13907691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 9912200 - 9912148
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||||||||||||||||| |||||||| |||| | |||||||| | |||||||    
T  9912200 gaacaatgtcataagctggtttcataagttctccgaaacagtcgcccaaaact 9912148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 27595572 - 27595532
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctca 50  Q
    |||||||||| ||||| |||||||||| |||||||||||||    
T  27595572 atgtcataagttgtttccataaattctcccaaacagtctca 27595532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 31813222 - 31813274
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||| ||||||||  ||||||||| |||| ||||| ||||||||||||||    
T  31813222 gaacaatctcataagcaattttcataagttctcccaaatagtctcacaaaact 31813274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 32976042 - 32976086
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    |||||||||||||||||  ||||  ||||||||||||||||||||    
T  32976042 aatgtcataagctgtttctataagctcttccaaacagtctcacaa 32976086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 34009496 - 34009460
Alignment:
Q  18 agctgttttcataaattcttccaaacagtctcacaaa 54  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  34009496 agctgttttcataaattctcccaaactgtctcacaaa 34009460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 8e-17; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 42419858 - 42419942
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaa 93  Q
    ||||||||||||||||||| ||| |||| ||||||||||||| |||||| | || || ||||||||||||||||  |||||||||    
T  42419858 aatgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaacttatgtcagaagataaactcaaataagtcaatccaaa 42419942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 4606986 - 4607077
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||| |||||||| || |||| ||||| |||||||||||||| |  || | |||||| ||||||||| |||||||||||||    
T  4606986 gaacaatgtcataagttgttttcacaagttctcccaaatagtctcacaaaacttatattggtagataagctcaaataagccaatccaaacag 4607077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 2416374 - 2416464
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    |||||||| || |||||||||| |||| ||||||||| |||| |||||||||| | ||||| ||||||||||||||||  ||||| |||||    
T  2416374 gaacaatgacaaaagctgttttaataagttcttccaagcagtttcacaaaacttatgttagtagataaactcaaataagtcaatctaaaca 2416464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 15757661 - 15757577
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||| | |  || | |||| ||||||||||||| ||||||||    
T  15757661 tgtcataagcagttttcataaattctcccaagcagtctcacaaaacttatgccagtaaataagctcaaataaaccattccaaaca 15757577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 5902554 - 5902511
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  5902554 atgtcataagctgttttcataagttcttccaaacagtctcacaa 5902511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 3312162 - 3312228
Alignment:
Q  29 taaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    |||||||| || ||||||||||||||||| |||| || |||||| ||||||||| ||||||||||||    
T  3312162 taaattctccccaacagtctcacaaaacttacgtcagtagataagctcaaataagccaatccaaaca 3312228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 42659215 - 42659129
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||| | |  || | |||| ||||||||| |||| ||||||||    
T  42659215 atgtcataagctgttttcaaaacttctcccaaacagtctcacaaaacttatgccagtaaataagctcaaataagccaacccaaacag 42659129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 7035570 - 7035509
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataa 72  Q
    ||||||||||||||| ||||| |||||| |||||||||||||||||| | ||||||| ||||    
T  7035570 tgtcataagctgtttccataagttcttcaaaacagtctcacaaaacttatgttagcatataa 7035509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 5745788 - 5745744
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    |||||||||||||||||||||||||||| |||||||||| |||||    
T  5745788 tgtcataagctgttttcataaattcttctaaacagtctctcaaaa 5745744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 7928308 - 7928216
Alignment:
Q  5 gaacaatgtc-ataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||| |||||||||||||| || ||||| | |||||||||||| |||| | || |  |||||| ||||||||| |||||||||||||    
T  7928308 gaacaatgtccataagctgttttcaaaagttctttctaacagtctcacacaacttatgtcaatagataagctcaaataagccaatccaaacag 7928216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 23974496 - 23974412
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||||||||||||||| |||| | ||||| |||||| || |||| || || |||||||| |||||||  |||||||||||    
T  23974496 tgtcataagctgttttcataagttctccaaaacaatctcactaatctcatgtcagtagataaacccaaataagtcaatccaaaca 23974412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 30331818 - 30331902
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||| | ||||||||| |||| |||||||||||||||||||| | || || |||||| || ||||||  |||||||||||    
T  30331818 tgtcataaggttttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctgaaataagtcaatccaaaca 30331902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 36534829 - 36534913
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatc 89  Q
    ||||||| | ||||||||||||||||| || | |||||||||||||||||||| | |  |||| |||| ||||||||| ||||||    
T  36534829 gaacaattttataagctgttttcataagttatcccaaacagtctcacaaaacttatgaaagcatataagctcaaataagccaatc 36534913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 44590097 - 44590173
Alignment:
Q  17 aagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaa 93  Q
    ||||||||||||||| ||||| ||||| ||||||||||||| | ||    |||||||||||||||| ||||||||||    
T  44590097 aagctgttttcataagttctttcaaacggtctcacaaaacttatgtctatagataaactcaaataagccaatccaaa 44590173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 44119843 - 44119934
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||||||||||| ||   ||||||||  |||||||| |||||||||| | || ||||  ||| ||||||||| |||||||||||||    
T  44119843 gaacaatgtcataagctgcttatgtaaattctctcaaacagtttcacaaaacttatgtcagcatgtaagctcaaataagccaatccaaacag 44119934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 40682404 - 40682312
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgt---tagcagataaactcaaataaaccaatccaaac 94  Q
    ||||||||||||||||| |||| | || |||| ||||||| |||||||||||| | ||   ||| ||| |||||||||||| |||||||||||    
T  40682404 gaacaatgtcataagctattttaacaagttctcccaaacaatctcacaaaacttatgtcagtagtagacaaactcaaataagccaatccaaac 40682312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 41812097 - 41812011
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    |||||||||||||||||||| || |||| |||||||| ||||| |||||   |   |||||||| ||||||||| ||||||||||||    
T  41812097 aatgtcataagctgttttcaaaagttctcccaaacagcctcactaaacttttgactgcagataagctcaaataagccaatccaaaca 41812011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 750731 - 750808
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    |||||||||||| |||| ||||||||| ||||| |||||| |||||||||||  | |  || ||||||||||||||||    
T  750731 gaacaatgtcattagctcttttcataagttcttgcaaacactctcacaaaacatatgccaggagataaactcaaataa 750808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 43279532 - 43279484
Alignment:
Q  11 tgtcataagctgttttcataaat--tcttccaaacagtctcacaaaact 57  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  43279532 tgtcataagctgttttcataaattctctcccaaacagtctcacaaaact 43279484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 16451179 - 16451231
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||| ||||||||||| |||| |||||| |||||||| ||||    
T  16451179 gaacaatgtcataagttgttttcataagttctcccaaacggtctcacagaact 16451231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 41293168 - 41293120
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||||||||||||||||| |||| |||| ||||| ||||||||||||||    
T  41293168 aatgtcataagctgtttttataagttctcccaaatagtctcacaaaact 41293120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 12313174 - 12313135
Alignment:
Q  14 cataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  12313174 cataagctgttttcataaattctcccaaacaatctcacaa 12313135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 27317449 - 27317536
Alignment:
Q  14 cataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagactgt 101  Q
    |||||| ||||||||||| ||||  |||||||||||| |||||| | ||  | |||||| |||||||||  |||||||||||| ||||    
T  27317449 cataagttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataagtcaatccaaacaggctgt 27317536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 28677665 - 28677626
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtct 48  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  28677665 aatgtcataagctgttttcataagttctcccaaacagtct 28677626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 32837388 - 32837431
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    |||| ||||||||||||||||| |||| ||||||||||||||||    
T  32837388 atgttataagctgttttcataagttctcccaaacagtctcacaa 32837431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 40776102 - 40776067
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacag 45  Q
    |||||||||||||||||||||| |||||||||||||    
T  40776102 atgtcataagctgttttcataagttcttccaaacag 40776067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 40943978 - 40944021
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||    
T  40943978 atgtcataagctgttttcataaacttttccaaacagtttcacaa 40944021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 15305744 - 15305826
Alignment:
Q  14 cataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||| |||| ||| || |||| ||||||||| |||||||||| | || |  |||||| ||||||||| |||||||||||||    
T  15305744 cataagttgttgtcaaaagttctaccaaacagtttcacaaaacttatgtcaatagataagctcaaataagccaatccaaacag 15305826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 24100995 - 24101041
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  24100995 tgtcataaggtgtttccataagttctcccaaacagtctcacaaaact 24101041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 31744364 - 31744450
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||| ||||||||||||| || ||||  |||||||||||| |||||| | ||  | |||||| | ||||||| |||||||||||||    
T  31744364 atgtcttaagctgttttcaaaagttctctcaaacagtctcagaaaacttatgtcggtagataagcccaaataagccaatccaaacag 31744450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 41851602 - 41851648
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||| ||||| |||||||||| |||| |||||||||||||||    
T  41851602 tgtcataagttgtttccataaattctcccaatcagtctcacaaaact 41851648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 449912 - 449985
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    |||||||||||||||||||| || | || ||||||| ||||| |||||| | | ||| |||||| |||||||||    
T  449912 aatgtcataagctgttttcaaaagtcctcccaaacaatctcataaaacttatgctagtagataagctcaaataa 449985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 2142731 - 2142808
Alignment:
Q  21 tgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    ||||||||||| |||| ||||||||||||| |||||| | |   | ||||||||||||||||  ||| ||||||||||    
T  2142731 tgttttcataagttctcccaaacagtctcataaaacttatgcatgtagataaactcaaataagtcaaaccaaacagac 2142808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 18066192 - 18066241
Alignment:
Q  8 caatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||||||||||||||||||||||| || | | ||||||| ||||||||||    
T  18066192 caatgtcataagctgttttcataagttgtacaaaacagtttcacaaaact 18066241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 18179050 - 18179103
Alignment:
Q  45 gtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    ||||||||||||| | ||||| |||||| |||||||||  ||||||||||||||    
T  18179050 gtctcacaaaacttatgttagtagataagctcaaataagtcaatccaaacagac 18179103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 26202095 - 26202180
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||||||| |||| |||||||||||  |||| | |||||||||||| | || |||||||||  ||||||||   |||||||||||    
T  26202095 tgtcataagttgttctcataaattctagcaaagaatctcacaaaacttatgtcagcagataagttcaaataagttaatccaaacag 26202180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 36125432 - 36125510
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    |||||||||||||||| |||||  | |||| ||||||| |||| | |  || |||||||||||||||||| ||||||||||    
T  36125432 ataagctgttttcatatattct--ctaacactctcacagaacttatgccagtagataaactcaaataaacgaatccaaaca 36125510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 39073690 - 39073621
Alignment:
Q  26 tcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    |||||| ||||||||||||||||||||||| | | ||  | |||| |||||||||||| ||||| |||||    
T  39073690 tcataagttcttccaaacagtctcacaaaaattatgtcggtagatgaactcaaataaatcaatctaaaca 39073621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 43036621 - 43036710
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    ||||||||||| |||| |||||| || | ||||| | |||||||||||| | || |  |||||| ||||||||| ||||| |||||||||    
T  43036621 aatgtcataagatgttctcataagttttcccaaatactctcacaaaacttatgtaactagataagctcaaataatccaatacaaacagac 43036710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 44606115 - 44606078
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtc 47  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  44606115 atgtcataagttgttttcataagttcttccaaacagtc 44606078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 97
Target Start/End: Original strand, 14209326 - 14209354
Alignment:
Q  69 ataaactcaaataaaccaatccaaacaga 97  Q
    |||||||||||||||||||||||||||||    
T  14209326 ataaactcaaataaaccaatccaaacaga 14209354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 26143649 - 26143560
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||| |||||| ||||||| ||| |||| |||||||||||  ||||| | | || || |||||| |||||| || |||||||||||||    
T  26143649 gaacaatgacataagttgttttcgtaagttctcccaaacagtct--caaaatttatgtcagtagataagctcaaacaagccaatccaaacag 26143560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 27699534 - 27699490
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaa 54  Q
    |||||||||| |||||||||||| |||  ||||||||||||||||    
T  27699534 atgtcataagttgttttcataaactctctcaaacagtctcacaaa 27699490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 32106804 - 32106764
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctca 50  Q
    |||||||||||||||||||||| ||||  ||||||||||||    
T  32106804 atgtcataagctgttttcataagttctcacaaacagtctca 32106764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 43529859 - 43529827
Alignment:
Q  14 cataagctgttttcataaattcttccaaacagt 46  Q
    ||||||||||||||||||||||| |||||||||    
T  43529859 cataagctgttttcataaattctcccaaacagt 43529827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 19302566 - 19302481
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||| | || || |||||| |||||||||  |||| |||||||    
T  19302566 tgtcataagctgttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaaataagtcaattcaaacag 19302481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 28691838 - 28691752
Alignment:
Q  12 gtcataagctgttttcataaattcttccaaacagtctcacaaaa-ctcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    ||||||||||||||||||||  ||| || ||||||||||||||  || | ||||||||||||||||||||||  ||||||||||||||    
T  28691838 gtcataagctgttttcataagatct-ccgaacagtctcacaaatgcttatgttagcagataaactcaaataagtcaatccaaacagac 28691752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 19022588 - 19022527
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataa 72  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||||||| || || ||||||    
T  19022588 tgtcataagttgttttcataaattctcccaaacaatctcacaaaactcatgtcagtagataa 19022527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 5947306 - 5947393
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||||||||||| ||||| || |||||||||||||||||| |||||| |    |  |||||| ||||||||| |||||||||||||    
T  5947306 aatgtcataagctggtttcaaaagttcttccaaacagtctcataaaacttataccaatagataagctcaaataagccaatccaaacag 5947393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 4970792 - 4970710
Alignment:
Q  14 cataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||| ||||||||||| |||| |||||||||||||||| ||| | || |  |||||| |||||||||  ||||||||||||    
T  4970792 cataagttgttttcataagttctcccaaacagtctcacaagacttatgtcacgagataagctcaaataagtcaatccaaacag 4970710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 27288018 - 27288060
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  27288018 ataagctgttttcataagttcttccaaatagtctcacaaaact 27288060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 34035978 - 34036072
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacagact 99  Q
    ||||||||||||||| | ||||||||| |||||||||  |||||||||| ||  | || || |||||| |||||||||  |||| ||||||||||    
T  34035978 gaacaatgtcataagttattttcataagttcttccaagtagtctcacaatacatatgtcagtagataagctcaaataagtcaattcaaacagact 34036072  T

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Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 44989686 - 44989597
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||||| ||| ||||||||||| || | |||||||||||||||||||| | | || | ||||||||| ||||| ||||| ||||||    
T  44989686 gaacaatgtcagaagttgttttcataagttttcccaaacagtctcacaaaacttatgctaccggataaactc-aataagccaattcaaaca 44989597  T

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Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 21196342 - 21196407
Alignment:
Q  18 agctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaa 83  Q
    |||||||| |||||||||||| |||||||||||||||||| | | ||| | |||| ||||||||||    
T  21196342 agctgtttgcataaattcttctaaacagtctcacaaaacttatgctagtatataagctcaaataaa 21196407  T

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Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 34744095 - 34744164
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaat 80  Q
    ||||||||| | ||||||| | |||||||||||||||||||||| || | ||||| |||||| |||||||    
T  34744095 tgtcataagttcttttcattagttcttccaaacagtctcacaaatcttatgttagtagataagctcaaat 34744164  T

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Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 21568494 - 21568454
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  21568494 ataagctgttttcataagttctcccaaacagtctcacaaaa 21568454  T

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Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 44822054 - 44822110
Alignment:
Q  40 aaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    ||||| |||||||||||| | || |||||||||||||||||||  ||||||||||||    
T  44822054 aaacaatctcacaaaacttatgtcagcagataaactcaaataagtcaatccaaacag 44822110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 46280282 - 46280212
Alignment:
Q  15 ataagctgttttcataaa---ttcttccaaacagtctcacaaaactcacgttagcagataaactcaaataa 82  Q
    |||||||||||||||||    |||| |||||||||||||||||||  | || |||||||||||||||||||    
T  46280282 ataagctgttttcataataagttctcccaaacagtctcacaaaacatatgtcagcagataaactcaaataa 46280212  T

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Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 18765366 - 18765433
Alignment:
Q  26 tcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaa 93  Q
    |||||| |||| |||||||||||||||||||| | || |  |||||| |||||||||| |||||||||    
T  18765366 tcataagttctcccaaacagtctcacaaaacttatgtcaatagataagctcaaataaagcaatccaaa 18765433  T

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Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 48470109 - 48470196
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||| |||||||||||||||||| |||| ||||||| ||||| |||||| | ||    |||||| ||||||||| ||||||| |||||    
T  48470109 aatgccataagctgttttcataagttctcccaaacaatctcataaaacttatgtctatagataagctcaaataagccaatcctaacag 48470196  T

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Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 14768395 - 14768437
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||||||||||||||||  ||||||||||||| ||||||||||    
T  14768395 ataagctgttttcataagctcttccaaacagtgtcacaaaact 14768437  T

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Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 22940055 - 22940013
Alignment:
Q  15 ataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||    
T  22940055 ataagttgttttcataagttcttccaaatagtctcacaaaact 22940013  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 17248613 - 17248662
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaa 54  Q
    ||||||||| |||||||||||| |||| |||| ||||||||||| |||||    
T  17248613 gaacaatgttataagctgtttttataagttctcccaaacagtcttacaaa 17248662  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 20526937 - 20526888
Alignment:
Q  6 aacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaa 55  Q
    |||||| ||||||||||||||||| | ||||  |||||||||||||||||    
T  20526937 aacaatctcataagctgttttcatcagttctctcaaacagtctcacaaaa 20526888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 23214919 - 23214960
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctca 50  Q
    ||||||||||| ||||||||||||||||  ||||||||||||    
T  23214919 aatgtcataagttgttttcataaattctctcaaacagtctca 23214960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 33128819 - 33128903
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaacag 96  Q
    |||||| ||| |||||||||| || | ||||||| ||| |||||||| | ||||||| |||| |||||||||  ||||||||||||    
T  33128819 tgtcatcagcagttttcataactt-tcccaaacaatcttacaaaacttaagttagcatataagctcaaataagtcaatccaaacag 33128903  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 41040230 - 41040319
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaa-actcacgttagcagataaactcaaataaaccaatccaaacagac 98  Q
    |||||||||||||||| |||||  ||||| ||| || |||||||| ||| |  | || ||||||||||||||||| |||| |||||||||    
T  41040230 atgtcataagctgtttccataagctcttctaaagagcctcacaaatacttatatcagtagataaactcaaataaatcaattcaaacagac 41040319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 45338537 - 45338602
Alignment:
Q  28 ataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaa 93  Q
    |||| |||| ||||||||||||| |||||| | | |||  ||||||||||||||| ||||||||||    
T  45338537 ataagttctcccaaacagtctcaaaaaacttatgctagtggataaactcaaataagccaatccaaa 45338602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 946793 - 946837
Alignment:
Q  10 atgtcataagctgttttcataaattcttccaaacagtctcacaaa 54  Q
    ||||||||| || ||||||||| |||||| |||||||||||||||    
T  946793 atgtcataaactattttcataagttcttctaaacagtctcacaaa 946837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 3836689 - 3836645
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||    
T  3836689 aatgtcataagctattttcataagttctcccaaacagtttcacaa 3836645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 6633932 - 6633972
Alignment:
Q  13 tcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    ||||||| ||||| |||||||||||||| ||||||||||||    
T  6633932 tcataagttgtttccataaattcttccatacagtctcacaa 6633972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 11619161 - 11619077
Alignment:
Q  11 tgtcataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 95  Q
    ||||||||| |||||||||||||||| |||| | || |||  || || | || || |||||| ||||||||| ||||||||||||    
T  11619161 tgtcataagttgttttcataaattctcccaatctgtttcatgaagcttatgtcagtagataagctcaaataagccaatccaaaca 11619077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 33678841 - 33678893
Alignment:
Q  5 gaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    ||||||||| ||||| ||||||||||| |||| |||||  |||||||||||||    
T  33678841 gaacaatgttataagttgttttcataagttctcccaaattgtctcacaaaact 33678893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 40009544 - 40009584
Alignment:
Q  13 tcataagctgttttcataaattcttccaaacagtctcacaa 53  Q
    ||||||||| |||||||||||||| ||||||||| ||||||    
T  40009544 tcataagctattttcataaattctaccaaacagtttcacaa 40009584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 48140276 - 48140316
Alignment:
Q  17 aagctgttttcataaattcttccaaacagtctcacaaaact 57  Q
    |||||||||||||| ||||| ||||||||||||||| ||||    
T  48140276 aagctgttttcatacattctcccaaacagtctcacataact 48140316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 24686 - 24733
Alignment:
Q  9 aatgtcataagctgttttcataaattcttccaaacagtctcacaaaac 56  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||    
T  24686 aatgtcataagctgttttgataagttctcccaaacagtctcacaaaac 24733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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