View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19631_high_15 (Length: 523)
Name: NF19631_high_15
Description: NF19631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19631_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 478; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 14 - 507
Target Start/End: Original strand, 1409732 - 1410225
Alignment:
| Q |
14 |
tactaaatgttatttctaagaatccctacataaaattaagcgcacgtgtatttatggatggacgaaatgagatcattttaatttgttatttaaaatctac |
113 |
Q |
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| T |
1409732 |
tactaaatgttatttctaagaatccctagataaaattaagcgcacgtgtatttatggatggacgaaatgagatcattttaatttgttatttaaaatctac |
1409831 |
T |
|
| Q |
114 |
ttcactttttggatacagcctcttttgtgctaagaattgtattgagtcagaggaacaacacaaaaaatgttatagtaaagaaaggaaagagggcaaaaga |
213 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1409832 |
ttcactttttggatacagactcttttgtgctaagaattgtattgagtcagaggaacaacacaaaaaatgttatagtaaagaaaggaaagagggcaaaaga |
1409931 |
T |
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| Q |
214 |
ggatgcaaaaatgttacacccctattgtggagggagttgggagggtcttttcatgagaaagacagactgtagttgaagttactggtgagagcaagtggag |
313 |
Q |
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| T |
1409932 |
ggatgcaaaaatgttacacccctattgtggagggagttgggagggtcttttcatgagaaagacagactgtagttgaagttactggtgagagcaagtggag |
1410031 |
T |
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| Q |
314 |
aaattaactagagaatgtgaatgtggtatatggaagttataattacaagtttctttcctttttcatagaagggtatgtgagtggacacatgtgtacgtat |
413 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1410032 |
aaattaactagagaatgtgattgtggtatatggaagttataattacaagtttctttcctttttcatagaagggtatgtgagtggacacatgtgtacgtat |
1410131 |
T |
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| Q |
414 |
tggaatatgatttggcaaagatttgaaaggctgtgttttttgtatcttgagacatgtttgacatgaaaacaaccccaccacttattcttcatta |
507 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
1410132 |
tggaatatgatttggcaaagatttgaaaggctgtgttttttgtatcttgagacatgtttgacatggaaacaaccccaccacttattcttcatta |
1410225 |
T |
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