View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19631_high_88 (Length: 250)
Name: NF19631_high_88
Description: NF19631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19631_high_88 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 12 - 250
Target Start/End: Original strand, 34831904 - 34832142
Alignment:
| Q |
12 |
tattctcacaccatttttgtctctttgttactttcacaaacactaactccacgcgcctcatcactcagtagttctttactcaccattttcatgtaggctg |
111 |
Q |
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| T |
34831904 |
tattctcacaccatttttgtctctttgttactttcacaaacactaactccacgcgcctcatcactcagtagttctttactcaccattttcatgtaggctg |
34832003 |
T |
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| Q |
112 |
tgcattccacgcgatactgctcgaatgcttgcttgagctttctttaactacaagagtgcttaaattcatcaataatttggatttcaagttcaattagagt |
211 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34832004 |
tgcgttccacgcgatactgctcgaatgcttgcttgagctttctttaactacaagagtgcttaaattcatcaataatttggatttcaagttcaattagagt |
34832103 |
T |
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| Q |
212 |
ggcaaagcaaattacgatactgtcctcttgcattttgtc |
250 |
Q |
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||||||||||||||||| ||||||||||||||| ||||| |
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| T |
34832104 |
ggcaaagcaaattacgacactgtcctcttgcatattgtc |
34832142 |
T |
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