View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19631_high_96 (Length: 241)
Name: NF19631_high_96
Description: NF19631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19631_high_96 |
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Alignment Details
Target: chr7 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 34832149 - 34832358
Alignment:
| Q |
1 |
tgtttgcattatataatgaaattactttttaatccttcctgcgcaactatcactatacttggaagaagtgaggtttagcatggttgaaagttgattgaaa |
100 |
Q |
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| T |
34832149 |
tgtttgcattatataatgaaattactttttaatccttcctgcgcaaccatcactatacttggaagaa-------------tggttgaaggttgattgaaa |
34832235 |
T |
|
| Q |
101 |
agatttaaaaactagtaatttttatggattggaagatcaaaatttatcattgatatgataatgttggaaagctaattcatgtaccgatgcacttgcaaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
34832236 |
agatttaaaaactagtaatttttatggattggaagatcaaaatttatcattgatatgatcatgttggaaagctaattcatgtaccgatgcacttgcaaat |
34832335 |
T |
|
| Q |
201 |
atggattgtgagtatgatccccc |
223 |
Q |
| |
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|||| ||||||||||| |||||| |
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| T |
34832336 |
atgggttgtgagtatggtccccc |
34832358 |
T |
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