View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19631_low_101 (Length: 239)
Name: NF19631_low_101
Description: NF19631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19631_low_101 |
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Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 24305881 - 24305675
Alignment:
| Q |
14 |
aatattaagttgtttatattataagacaattagaactatctttacttcatatcaaggttccttgttaaacaccttgtttagatcctaattaaactagtta |
113 |
Q |
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| T |
24305881 |
aatattaagttctttatattataagacaattagaactatctttacttcatatcaaggttccttgttaaacaccttgtttagatcctaatt-aacaagtta |
24305783 |
T |
|
| Q |
114 |
aaatctttaggtcaatcacatattcatcannnnnnnnngttacaactgaactcttctaagacttactttactctattttgtaatcgttacaactgcccaa |
213 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24305782 |
aaatctttaggtcaatcacatattcatcatttttttttgttacaactgaactcttctaagacttactttactctattttgtaatcgttacaactgcccaa |
24305683 |
T |
|
| Q |
214 |
cccaaatg |
221 |
Q |
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|||||||| |
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| T |
24305682 |
cccaaatg |
24305675 |
T |
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