View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19631_low_110 (Length: 225)
Name: NF19631_low_110
Description: NF19631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19631_low_110 |
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Alignment Details
Target: chr4 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 26665459 - 26665253
Alignment:
| Q |
1 |
tatgacttaactcacacttgacaaggagacatctggctagtttgcaatatatataggcgtaaactaattctatgggtaatattgatggaaataaaaaaca |
100 |
Q |
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| T |
26665459 |
tatgacttaattcacacttgacaaagagacatctggctagtttgcaatatatataggcgtaaactaattctatgggtaatattgatggaaataaaaaaca |
26665360 |
T |
|
| Q |
101 |
tgagacgtgcggtggagagtgaagagtaacatgttataacaaaacagactagtgtttgtgtgaaagtgaaagnnnnnnnncagaacagtgtcgttgaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |
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| T |
26665359 |
tgagacgtgcggtggagagtgaagagtaacatgttataacaaaacagactagtgtttgcgtgaaagtgaaagaaaaagaacagaacagtgtcgttgaaat |
26665260 |
T |
|
| Q |
201 |
ggaagat |
207 |
Q |
| |
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||||||| |
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| T |
26665259 |
ggaagat |
26665253 |
T |
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