View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19631_low_45 (Length: 375)
Name: NF19631_low_45
Description: NF19631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19631_low_45 |
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Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 17 - 292
Target Start/End: Complemental strand, 44767973 - 44767699
Alignment:
| Q |
17 |
ccaaaaacttatggtaagatggttcgtaccatgaatatgaagtacattaattaacaaactccgaacaacgtatgttgtgagaataccatccatctacctc |
116 |
Q |
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| T |
44767973 |
ccaaaaacttatggtaagatggttcgtaccataaatatgaagtacattaattaacaaactccgaacaacgtatgttgtgagaataccatccatctacctc |
44767874 |
T |
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| Q |
117 |
ttcttacaaaattctttatgttattagttttcaaaactagaatgtctttatttccccgcatcgttatccttaagaaaaccatcaactataccgactttct |
216 |
Q |
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| T |
44767873 |
t-cttacaaaattctttatgttattagttttcaaaactagaatgtctttatttccccgcatcgttatccttaagaaagccatcaactataccgactttct |
44767775 |
T |
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| Q |
217 |
tgcaaatttgagtcactgtagttctttatgatgtatacttgaatcttaaccttcatcatggggaatattatatcca |
292 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44767774 |
tgcaaatttgagtcattgtagttctttatgatgtatacttgaatcttaaccttcatcatggggaatattatatcca |
44767699 |
T |
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