View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19631_low_69 (Length: 295)
Name: NF19631_low_69
Description: NF19631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19631_low_69 |
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Alignment Details
Target: chr4 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 9 - 278
Target Start/End: Original strand, 52989983 - 52990252
Alignment:
| Q |
9 |
gaagaatataaaacacaacgatcaaaggtcataagctaatagacaggattatattgaaacaatgttacacttcaattcaattggcctcaaacatgtaatg |
108 |
Q |
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| T |
52989983 |
gaagaaaataaaacacaatgatcaaaggtcataagctaatagacaggattatattgaaacaatgttacacttcaattcaattggcctcaaacatgtaatg |
52990082 |
T |
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| Q |
109 |
tcactgtaggcaagggctttctcacctgtttcagaccctgctcttgttgctatctttttgtttccaatgtacagaactctctcatcaatttttccacaga |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52990083 |
tcactgtaggcaagggctttctcacctgtttcagaccctgctcttgttgctatctttttgtttccaatgtacagaactctctcatcaatttttccacaga |
52990182 |
T |
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| Q |
209 |
ttccttctccaggaaaattttcaaattctgtcaccttttctggatttggcacaatagagagagaccttcc |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52990183 |
ttccttctccaggaaaattttcaaattctgtcaccttttctggatttggcacaatagagagagaccttcc |
52990252 |
T |
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