View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19631_low_7 (Length: 585)
Name: NF19631_low_7
Description: NF19631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19631_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 489; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 58 - 569
Target Start/End: Original strand, 31875859 - 31876368
Alignment:
| Q |
58 |
gttaaatcaaatattacaacaaaaaatgcaaaccaaagcgcaaaaatgtatgatgaatattcatactttcttttttgttttaaactgaattggccggatg |
157 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31875859 |
gttaaatcaaatattacaacaaaaaatgcaaaccaaagcgcaaaaatgtatgatgaatattcatactttcttttttgttttaaactgaattggccggatg |
31875958 |
T |
|
| Q |
158 |
aaattgatatactatagtatatttaacgaggactatacatcacccttcataattattaattggtttaggctcgattcaaaaatctaaatatcggaagaag |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
31875959 |
aaattgatatactatagtatatttaacgaggactatacatcacccttcataattattaattggtttaggctcgattcaaaaatctaaat--cggaagaag |
31876056 |
T |
|
| Q |
258 |
gaaaggaatcaaacttattgtaatcaattttgaaaaatatatatgatgcttactataagtttggcatatacaatctttccaattctagctatagcatcgc |
357 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31876057 |
gaaaggaatcaaacttattgtaatcaagtttgaaaaatatatatgatgcttactataagtttggcatatacaatctttccaattctagctatagcatcgc |
31876156 |
T |
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| Q |
358 |
ttattattagttaaccttaaccataaccatagagaaaagtaccttgatctaaacatcacataaaatctccaagcaataccttcttgaacatggaagaata |
457 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
31876157 |
ttattattagttaaccttaaccataaccatagagaaaagtaccatgatctaaacatcacataaaatctccaagcaataccttcttgaacatggatgaata |
31876256 |
T |
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| Q |
458 |
actccctcttgatcttacattaccaaaacacacactagagctagtaacatcgtaaagatcttcattttcacctttcctcgagtgtatcatcggagaagat |
557 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31876257 |
actccctcttgatcttacattaccaaaacacacactagagctagtaacatcgtaaagatcttcattttcacctttcctcgagtgtatcatcggagaagat |
31876356 |
T |
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| Q |
558 |
ggcactgaatat |
569 |
Q |
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|||||||||||| |
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| T |
31876357 |
ggcactgaatat |
31876368 |
T |
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