View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19631_low_79 (Length: 279)
Name: NF19631_low_79
Description: NF19631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19631_low_79 |
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Alignment Details
Target: chr4 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 25 - 181
Target Start/End: Original strand, 24363354 - 24363510
Alignment:
| Q |
25 |
aaatgagcaacaaaatcaacatggaaaaatgtgatagttagacaagtataattaatgaataagcaaattagtagtatgagtgttttacacttatttgaaa |
124 |
Q |
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| T |
24363354 |
aaatgagcaacaaaatcaacatggaaaaatgtgatagttagacaagtataattaatgaataagcaaattagtactatgagtgttttacacttatttaaaa |
24363453 |
T |
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| Q |
125 |
tatatcacaatgtaaatttgagggtcctggatcctctactgcagcactcacaatagg |
181 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24363454 |
tatatcacaatgtaaatttgagggtcctggatcctctactgcagcactcacaatagg |
24363510 |
T |
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