View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19632_high_7 (Length: 287)
Name: NF19632_high_7
Description: NF19632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19632_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 18642934 - 18642678
Alignment:
| Q |
18 |
attagtggaaacagatgtttcaaaagtatattattctatatgtttagatgtgaatcactgtactttggttgcaggttagatcttagctgtcctctatcca |
117 |
Q |
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| T |
18642934 |
attagtggaaacagatgtttcaaaagtatattattctatatgtttagatgtgaatcactgtactttggttgcaggttagatctttgctgtcctctatcca |
18642835 |
T |
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| Q |
118 |
gtgcagtatactgaagatcccggtcacagatggctctagtaatacaacaaaaggtcttttagttgctttggtttcttggtcatggatacgtaacattaag |
217 |
Q |
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| T |
18642834 |
gtgcagtatactgaagatcccggtcacagatggctctagtaatacaacaaaaggtcttttagttgctttggtttcttggtcatggatacgtaacattaag |
18642735 |
T |
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| Q |
218 |
ttgaatgacttaatgagatttgaaacatgttttaatttttgtgtgtgtgcgtctgtg |
274 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
18642734 |
ttgaatgacttaatgagatttgaaacatgttttaatttttgtgtgtgtgcgtgtgtg |
18642678 |
T |
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