View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19632_low_1 (Length: 708)
Name: NF19632_low_1
Description: NF19632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19632_low_1 |
 | |
|
| [»] scaffold0671 (1 HSPs) |
| | |
|
| [»] scaffold0065 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0359 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0076 (1 HSPs) |
| | |
|
| [»] scaffold0585 (1 HSPs) |
| | |
|
| [»] scaffold0146 (1 HSPs) |
| | |
|
| [»] scaffold0096 (1 HSPs) |
| | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0010 (1 HSPs) |
| | |
|
| [»] scaffold0075 (1 HSPs) |
| | |
|
| [»] scaffold0017 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 504; Significance: 0; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 504; E-Value: 0
Query Start/End: Original strand, 46 - 633
Target Start/End: Complemental strand, 21368980 - 21368387
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21368980 |
agaccagccaccctcattcattgatttgtcttgttaccattttttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
21368881 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattgaataaaaaggcaagttaa |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
21368880 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattgaataaaaagg-aagttaa |
21368782 |
T |
|
| Q |
240 |
tttttgttaaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccataga |
339 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21368781 |
tttttgttaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccataga |
21368682 |
T |
|
| Q |
340 |
cttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaa |
439 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
21368681 |
cttatcattttctaggattagaaagtgtggcatccctaaactctccattccatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaactaa |
21368582 |
T |
|
| Q |
440 |
attctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcattaacaatatttttagttcatt |
538 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21368581 |
attctaattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttccttttggcacaccctttcattaacaatatttttagttcatt |
21368482 |
T |
|
| Q |
539 |
tcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
21368481 |
tcctgtgttttgtgcctttaattaatctttcagcaaacaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
21368387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 64 - 633
Target Start/End: Original strand, 16156783 - 16157359
Alignment:
| Q |
64 |
cattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctgaaggaatcttaagagtta |
163 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
16156783 |
cattgatttgtcgtgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggcggaaggaatcctaagagtta |
16156882 |
T |
|
| Q |
164 |
tttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattgaataaaaaggcaagttaatttttgttaaaa--aagt |
255 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||| |||| |
|
|
| T |
16156883 |
tttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattgaataaaa-gacaagttaatttttgttaaaaaaaagt |
16156980 |
T |
|
| Q |
256 |
gagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttctagg |
355 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16156981 |
gagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttctagg |
16157080 |
T |
|
| Q |
356 |
attagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcattttcaact |
455 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16157081 |
attagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcattttcaact |
16157180 |
T |
|
| Q |
456 |
caaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcc |
554 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
16157181 |
caaatcattgtcaaaattaatcccaatacataattttcatttctttttggcacaccctttcattaacaatatttttagttcatttctagtgttttgtgcc |
16157280 |
T |
|
| Q |
555 |
tttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
16157281 |
tttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
16157359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 59 - 626
Target Start/End: Complemental strand, 22708001 - 22707446
Alignment:
| Q |
59 |
tcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctgaaggaatcttaag |
158 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
22708001 |
tcattcattgatttgtcttgtaaccattttttatattgatgttaatttactttagccataggaaataatgattgattaattttgctgaaggaatcttaag |
22707902 |
T |
|
| Q |
159 |
agttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattgaataaaaaggcaagttaatttttgttaaaaa |
252 |
Q |
| |
|
||||||||| |||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| ||||| | |||||||||||| |
|
|
| T |
22707901 |
tgttatttgccttttc-ctttgtaattcggcaagtgtcattcctacctatatataggacacgaaaattgaataaaaatt-aagttgaattttgttaaaaa |
22707804 |
T |
|
| Q |
253 |
agtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcatt-ccatagacttatcattttc |
351 |
Q |
| |
|
| |||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| ||| |||||| ||||||| |||| |
|
|
| T |
22707803 |
-gcgagtaattgctctttaggttatgaattggaccttgtat---------caagaatcctttcttgtggtgatctttatttccataggcttatcagtttc |
22707714 |
T |
|
| Q |
352 |
taggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcattttc |
451 |
Q |
| |
|
||||||||||||||| |||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
22707713 |
taggattagaaagtgaggcgtccctaaactttctattgcatttcttgtttgaaaccacaaatcaacctaaacaccaattcaaaaccaaattctcatt--- |
22707617 |
T |
|
| Q |
452 |
aactcaaatcattgtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcattaacaatatttttagttcatttcttgtgttttg |
550 |
Q |
| |
|
| |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| | || |||||||||||| | | |||||||||||||||| |
|
|
| T |
22707616 |
-attcaaatcattatcaaaattaatcccaatacataattttcttttccttttggcacatcatt---ataacaatattttcattccatttcttgtgttttg |
22707521 |
T |
|
| Q |
551 |
tgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaa |
626 |
Q |
| |
|
||||| ||| |||||||| | |||||||||||||||||||||||||||||||||| ||| |||||| ||| ||||| |
|
|
| T |
22707520 |
tgcctataa-taatctttaatcaagcaacttttatcaattcataattaaaagtcaaatataaacaatttttacaaa |
22707446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 9595478 - 9595414
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttctt |
397 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
9595478 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccatttcatttctt |
9595414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 9646441 - 9646377
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttctt |
397 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
9646441 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccatttcatttctt |
9646377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 32706452 - 32706493
Alignment:
| Q |
335 |
atagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
32706452 |
atagacttatcactttcttggattagaaagtgtggtgtccct |
32706493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0671 (Bit Score: 485; Significance: 0; HSPs: 1)
Name: scaffold0671
Description:
Target: scaffold0671; HSP #1
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 46 - 633
Target Start/End: Original strand, 1864 - 2457
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1864 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
1963 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattgaataaaaaggcaagttaa |
239 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |
|
|
| T |
1964 |
aaggaatcctaagagttatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattgaataaaa-gacaagttaa |
2061 |
T |
|
| Q |
240 |
tttttgttaaaa-aagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatag |
338 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2062 |
tttttgttaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatag |
2161 |
T |
|
| Q |
339 |
acttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaacca |
438 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2162 |
acttatcattttctaggattagaaagtgtggcgtccctaaactctgcattccaattcttgtttgaaaccacaaatcagcctaaacaccaattcaaaacca |
2261 |
T |
|
| Q |
439 |
aattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcattaacaatatttttagttcat |
537 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
2262 |
aattctcattttcaactcaaatcattgtcaaaattaatcccaatacatgattttcgtttctttttggcacaccttttcattaacaatatttttagttcat |
2361 |
T |
|
| Q |
538 |
ttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||| ||||||||||| |
|
|
| T |
2362 |
ttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttctcaaaatagtgt |
2457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 484; Significance: 0; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 46 - 633
Target Start/End: Complemental strand, 33758305 - 33757712
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
33758305 |
agaccagccactctcattcatttatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaatactgatagattaatttggctg |
33758206 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctacctag------gacacgaaaattgaataaaaaggcaagttaa |
239 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
33758205 |
aag-aatcttaagagttatttgcattttttctttgtaattcaacaagtgtccctcctacctatatatatgacacgaaaattgaataaaaaggcaagttaa |
33758107 |
T |
|
| Q |
240 |
tttttgttaaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccataga |
339 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
33758106 |
tttttgttaaaaaagcgagtaattgctctttaggttctagattggaccttgtattgatcatataaagaatcctttcttgtggtgatcttcattcaataga |
33758007 |
T |
|
| Q |
340 |
cttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaa |
439 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33758006 |
cttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaa |
33757907 |
T |
|
| Q |
440 |
attctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcattaacaatatttttagttcatt |
538 |
Q |
| |
|
||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33757906 |
attataattttcaactcaaaccattgtcaaaattaatcccaatacataattttcgtttccttttggcacaccctttcattaacaatatttttagttcatt |
33757807 |
T |
|
| Q |
539 |
tcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
33757806 |
tcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
33757712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 46 - 633
Target Start/End: Complemental strand, 13180227 - 13179629
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13180227 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
13180128 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattgaataaaaaggcaagttaa |
239 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |
|
|
| T |
13180127 |
aaggaatcctaagagctatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattgaataaaa-gacaagttaa |
13180030 |
T |
|
| Q |
240 |
tttttgttaaaaaa--gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccata |
337 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13180029 |
ttttcgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccata |
13179930 |
T |
|
| Q |
338 |
gacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattc--aaaa |
435 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
13179929 |
gacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaaa |
13179830 |
T |
|
| Q |
436 |
ccaaattctca-ttttcaact-caaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcattaacaatatttttag |
532 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
13179829 |
ccaaattctcatttttcaactccaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttag |
13179730 |
T |
|
| Q |
533 |
ttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtg |
632 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
13179729 |
ttcatttcttgtgttttgtgcttttaattaaactttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtg |
13179630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 46 - 633
Target Start/End: Complemental strand, 13184885 - 13184287
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13184885 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
13184786 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattgaataaaaaggcaagttaa |
239 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |
|
|
| T |
13184785 |
aaggaatcctaagagctatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattgaataaaa-gacaagttaa |
13184688 |
T |
|
| Q |
240 |
tttttgttaaaaaa--gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccata |
337 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13184687 |
ttttcgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccata |
13184588 |
T |
|
| Q |
338 |
gacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattc--aaaa |
435 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
13184587 |
gacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaaa |
13184488 |
T |
|
| Q |
436 |
ccaaattctca-ttttcaact-caaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcattaacaatatttttag |
532 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
13184487 |
ccaaattctcatttttcaactccaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttag |
13184388 |
T |
|
| Q |
533 |
ttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtg |
632 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
13184387 |
ttcatttcttgtgttttgtgcttttaattaaactttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtg |
13184288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 293 - 376
Target Start/End: Complemental strand, 16019535 - 16019451
Alignment:
| Q |
293 |
ttgatcatatcaagaatcctttcttgtggtgatcttc-attccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || || ||| |||||||||| ||||| |||||||||||||| | |||||| |
|
|
| T |
16019535 |
ttgatcatatcaagaatcctttcttgtggtgatcctcaatcccagagacttatcactttcttggattagaaagtgtagtgtccct |
16019451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 334 - 376
Target Start/End: Original strand, 5553584 - 5553626
Alignment:
| Q |
334 |
catagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
5553584 |
catagacttatcactttcttggattagaaagtgtggcgtccct |
5553626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 373
Target Start/End: Original strand, 22271244 - 22271285
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtc |
373 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
22271244 |
tccatagacttatcactttctgggattagaaagtgtggcgtc |
22271285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 483; Significance: 0; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 46 - 633
Target Start/End: Original strand, 37260146 - 37260740
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
37260146 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggatg |
37260245 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattgaataaaaaggcaagttaa |
239 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |
|
|
| T |
37260246 |
aaggaatcctaagagttatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattgaataaaa-gacaagttaa |
37260343 |
T |
|
| Q |
240 |
tttttgttaaaa--aagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccata |
337 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37260344 |
tttttgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccata |
37260443 |
T |
|
| Q |
338 |
gacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaacc |
437 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
37260444 |
gacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccaattcttgtttgaaaccacgaatcagcctaaacaccaattcaaaatc |
37260543 |
T |
|
| Q |
438 |
aaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcattaacaatatttttagttca |
536 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
37260544 |
aaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttctttttggcacaccctttcattgacaatatttttagttca |
37260643 |
T |
|
| Q |
537 |
tttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
37260644 |
tttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
37260740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 6473884 - 6473928
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
6473884 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
6473928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 22062186 - 22062142
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
22062186 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
22062142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 20190474 - 20190431
Alignment:
| Q |
331 |
ttccatagacttatcattttctaggattagaaagtgtggcgtcc |
374 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
20190474 |
ttccatagacttatcagtttcttggattagaaagtgtggcgtcc |
20190431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 20127181 - 20127225
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
20127181 |
tccatagacttatcgctttcttggattagaaagtgtggcgtccct |
20127225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 481; Significance: 0; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 46 - 633
Target Start/End: Complemental strand, 22821634 - 22821039
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
22821634 |
agaccagccaccctcattcattgatttgtcttgtaaccatttgttgtattcatgttaatttacttcaaccataggaaataatgatagattaatttggctg |
22821535 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattgaataaaaagg-caagtta |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||| ||||||| |
|
|
| T |
22821534 |
aaggaatcttaagagttatttgcattttttctttttaattcggcaagtgtccctcctacctatatataggacacggaaattgaataaaaagggcaagtta |
22821435 |
T |
|
| Q |
239 |
atttttgttaaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatag |
338 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
22821434 |
atttttgttaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttggggtgaacttcattccatag |
22821335 |
T |
|
| Q |
339 |
acttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaacca |
438 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22821334 |
acttatcattttctaagattagaaagtgtggcgttcctaaactctccattccatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaacca |
22821235 |
T |
|
| Q |
439 |
aattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcattaacaatatttttagttcat |
537 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22821234 |
aattctcattttcaactcaattcattgccaaaattaatcccaatacataattttcgtttccttttggcacaccctttcattaacaatatttttagttcat |
22821135 |
T |
|
| Q |
538 |
ttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||| |
|
|
| T |
22821134 |
ttcttgtgttttgtacctttaattaatctttcagcaagcaacttttatcaattcataattataagtcaaatatgaacaattttcacaaaatagtgt |
22821039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 293 - 376
Target Start/End: Complemental strand, 11126497 - 11126413
Alignment:
| Q |
293 |
ttgatcatatcaagaatcctttcttgtggtgatcttc-attccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || || ||||||||||| || ||||| ||||||||||||||||| ||||| |
|
|
| T |
11126497 |
ttgatcatatcaagaatcctttcttgtggtgatcctcaatcccatagacttaccactttcttggattagaaagtgtggcatccct |
11126413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 29951844 - 29951909
Alignment:
| Q |
312 |
tttcttgtggtgatcttcat-tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
29951844 |
tttcttgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccct |
29951909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 244482 - 244438
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
244482 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
244438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 29950227 - 29950271
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
29950227 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
29950271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 4568361 - 4568405
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
4568361 |
tccatagacttatcacttttttggattagaaagtgtggcgtccct |
4568405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0065 (Bit Score: 479; Significance: 0; HSPs: 1)
Name: scaffold0065
Description:
Target: scaffold0065; HSP #1
Raw Score: 479; E-Value: 0
Query Start/End: Original strand, 46 - 633
Target Start/End: Complemental strand, 34117 - 33522
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |
|
|
| T |
34117 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttactccagccttaggaaataatgatggattaatttggctg |
34018 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattgaataaaaaggcaagttaa |
239 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||| |
|
|
| T |
34017 |
aaggaatcctaagagttatttgcattttttctttgtaattcagcaagtgtccctcctatctatatataggacacaaaaattgaataaaaagg-aagttaa |
33919 |
T |
|
| Q |
240 |
tttttgttaaaaaa--gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccata |
337 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33918 |
tttttgttaaaaaaaagtgagtaattgctctttaggttctggattggacattgtattgatcatatcaagaatcctttcttgtggtgatcttcattccata |
33819 |
T |
|
| Q |
338 |
gacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaacc |
437 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33818 |
gacttatcattttctaggattagaaagtgtggcgtccctaaactcttcattccatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaacc |
33719 |
T |
|
| Q |
438 |
aaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcattaacaatatttttagttca |
536 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
33718 |
aaattctcattttcaactcaaatcattgtcaaaaataatcccaatgcataattttcgtttccttttggcacaccctttcattaacaataattttagttca |
33619 |
T |
|
| Q |
537 |
tttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
33618 |
tttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
33522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 469; Significance: 0; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 46 - 633
Target Start/End: Original strand, 11475382 - 11475975
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11475382 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagctttaggaaataatgatagattaatttggctg |
11475481 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctacct------aggacacgaaaattgaataaaaaggcaagttaa |
239 |
Q |
| |
|
|||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||| |
|
|
| T |
11475482 |
aaggaatcctaagagttatttgcatattt-ctttgtaattcagcaagtgtccctcctacctttatataggacacgaaaattgaataaaa-gacaagttaa |
11475579 |
T |
|
| Q |
240 |
tttttgttaaaa-aagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatag |
338 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
11475580 |
tttttgttaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatgg |
11475679 |
T |
|
| Q |
339 |
acttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaacca |
438 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11475680 |
acttatcattttctaggattagaaagtgtggcgtctctaaactctccattccatttcttgtctgaaaccacaaatcagcctaaacaccaattcaaaacca |
11475779 |
T |
|
| Q |
439 |
aattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcattaacaatatttttagttcat |
537 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11475780 |
aattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttctttttggcacaccctttcattaacaatatttttagttcat |
11475879 |
T |
|
| Q |
538 |
ttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
11475880 |
ttcttaagttttgtgcctttaattaatctttcagcaatcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
11475975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 248 - 633
Target Start/End: Original strand, 34455684 - 34456073
Alignment:
| Q |
248 |
aaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattcc-atagacttatca |
346 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||| |
|
|
| T |
34455684 |
aaaaaagtgagtaactgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattcccacaaacttatca |
34455783 |
T |
|
| Q |
347 |
ttttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctca |
446 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| || |
|
|
| T |
34455784 |
ttttctacgattagaaagtgtggcgtccctaaaccctccattccatttcttgtttgaatccacaaatcagcctaaacacctattcaaatccaaattatcg |
34455883 |
T |
|
| Q |
447 |
ttttcaactcaaatcattgtc-aaaattaatcccaatacataattttcgt-ttcctttggcacaccctttcattaacaatatttttagttcatttcttgt |
544 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||| ||||||||| | ||||||| ||||| | ||||||| |||||||||| ||| ||||||| | |
|
|
| T |
34455884 |
ttttcaactcaaacaattgtcaaaaattaatcccaatatataattttcatgttccttttgcacatcatttcattcacaatattttcagtctatttcttat |
34455983 |
T |
|
| Q |
545 |
gttttgtgcctttaattaatctttcagcaagcaac-ttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||| |||||||||| ||||| |
|
|
| T |
34455984 |
gttttgtgcctatatttaatctttcagcaagcaactttttaccaattcataattaaaagtcaaatatgaacaattttcacaaaacagtgt |
34456073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 17266760 - 17266695
Alignment:
| Q |
312 |
tttcttgtggtgatcttcat-tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
17266760 |
tttcttgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccct |
17266695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 9167295 - 9167339
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
9167295 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
9167339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 15017684 - 15017640
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
15017684 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
15017640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 15019324 - 15019280
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
15019324 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
15019280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 39488191 - 39488147
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
39488191 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
39488147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 34098832 - 34098893
Alignment:
| Q |
335 |
atagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttctt |
397 |
Q |
| |
|
|||||||||||| ||| | ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
34098832 |
atagacttatcactttattggattagaaagtgtggcgtccct-gtctatccatttcatttctt |
34098893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 468; Significance: 0; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 46 - 633
Target Start/End: Complemental strand, 18774641 - 18774046
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18774641 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
18774542 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattgaataaaaaggcaagttaa |
239 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||||| |
|
|
| T |
18774541 |
aaggaatcctaagagctatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaatggaataaaa-gacaagttaa |
18774444 |
T |
|
| Q |
240 |
tttttgttaaaaaa--gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccata |
337 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18774443 |
tttttgttaaaaaaaagtgagtaattgctctttaggttctggattggacctagtattgatcatatcaagaatcctttcttgtggtgatcttcattccata |
18774344 |
T |
|
| Q |
338 |
gacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaacc |
437 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
18774343 |
gacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaacc |
18774244 |
T |
|
| Q |
438 |
aaattctca-ttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcattaacaatatttttagttc |
535 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
18774243 |
aaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttc |
18774144 |
T |
|
| Q |
536 |
atttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| | ||| |||||||||||||||| |
|
|
| T |
18774143 |
atttcttgtgttttgtgcctttaattaatctttctgcaagcaatttttatcaattcataattaaaagtcaaatatgatcaattttcacaaaatagtgt |
18774046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 226 - 633
Target Start/End: Complemental strand, 16417708 - 16417298
Alignment:
| Q |
226 |
aaaaggcaagttaatttttgttaaaaaa--gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtg |
323 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16417708 |
aaaagacaagttaatttttgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtg |
16417609 |
T |
|
| Q |
324 |
atcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaac |
423 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
16417608 |
atcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgattgaaaccacaaatcagcctaaac |
16417509 |
T |
|
| Q |
424 |
accaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcattaaca |
522 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16417508 |
accaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatctcaatacataattttcgtttctttttggcacaccctttcattaaca |
16417409 |
T |
|
| Q |
523 |
atatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttca |
622 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| |
|
|
| T |
16417408 |
atatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttca |
16417309 |
T |
|
| Q |
623 |
caaaatagtgt |
633 |
Q |
| |
|
|||||||||| |
|
|
| T |
16417308 |
taaaatagtgt |
16417298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 46 - 369
Target Start/End: Complemental strand, 17462704 - 17462373
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |
|
|
| T |
17462704 |
agaccagacaccctaattcattgatttgtcttgaaaccatttcttgtattcatgttaatttacttcagccataggaaataacgatagattaatttggttg |
17462605 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcatttttt-ctttgtaattcagcaagtgtccctcctacctag------gacacgaaaattgaataaaaaggcaagtta |
238 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
17462604 |
aaggaatcttaagagttatttgcatttttttctttgtaattcaacaagtgtccctcctacctatatataagacacgaaaattgaataaaaaggcaagtta |
17462505 |
T |
|
| Q |
239 |
atttttgttaaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcc-tttcttgtggtgatcttcattccata |
337 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
17462504 |
atttttgttaaaaaagtgagtaattgctctttaggttcttgattggaccttgtattgatcatatcaagaatccttttcttgtggtgatcttcattccata |
17462405 |
T |
|
| Q |
338 |
gacttatcattttctaggattagaaagtgtgg |
369 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |
|
|
| T |
17462404 |
gacttataattttctaggattagaaagtgtgg |
17462373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 365 - 633
Target Start/End: Complemental strand, 17459868 - 17459599
Alignment:
| Q |
365 |
tgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcattttcaactcaaatcatt |
464 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17459868 |
tgtggcgtccctaaactctccattctatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcattttcaactcaaatcatt |
17459769 |
T |
|
| Q |
465 |
gtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaa |
563 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||| | |||||||||| |
|
|
| T |
17459768 |
gtcaaaattaatcccaatacataattttcgtttccttttggcacaccctttcattaacaataattttagatcatttcttatgttttgagactttaattaa |
17459669 |
T |
|
| Q |
564 |
tctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
17459668 |
tctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
17459599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 46 - 280
Target Start/End: Complemental strand, 17470611 - 17470371
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17470611 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
17470512 |
T |
|
| Q |
146 |
aaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctacc------taggacacgaaaattgaataaaaaggcaagttaa |
239 |
Q |
| |
|
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
17470511 |
aaggaatcttaagagttatttgcattttatatttgtaattcagcaagtgtccctcctacctatatataggacacaaaaattgaataaaaaggcaagttaa |
17470412 |
T |
|
| Q |
240 |
tttttgttaaaaaagtgagtaattgctctttaggttctgca |
280 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
17470411 |
tttttgttaaaaaagtgagtaattgctccttaggtgctgca |
17470371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 255 - 376
Target Start/End: Original strand, 18446160 - 18446280
Alignment:
| Q |
255 |
tgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattcc-atagacttatcattttcta |
353 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||| | ||||| |||||||||||| |||||||||||| || ||| ||| |||||||||||| ||||| |
|
|
| T |
18446160 |
tgagcaattgctcttt-ggttctggattggaccaatt-ttgattatatcaagaatcttttcttgtggtggtcctcaatcccatagacttatcactttctt |
18446257 |
T |
|
| Q |
354 |
ggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
18446258 |
ggattagaaagtgtggcgtccct |
18446280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 17465105 - 17465064
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccattt |
87 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17465105 |
agaccagccaccctcattcattgatttgtcttgtaaccattt |
17465064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 20730984 - 20731028
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
20730984 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
20731028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 248 - 633
Target Start/End: Original strand, 288909 - 289295
Alignment:
| Q |
248 |
aaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcat |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
288909 |
aaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcat |
289008 |
T |
|
| Q |
348 |
tttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcat |
447 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
289009 |
tttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcat |
289108 |
T |
|
| Q |
448 |
tttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcattaacaatatttttagttcatttcttgtgt |
546 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
289109 |
tttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttctttttggcacaccctttcattaacaatatttttagttcatttcttgtgt |
289208 |
T |
|
| Q |
547 |
tttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
289209 |
tttgagcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
289295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0359 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: scaffold0359
Description:
Target: scaffold0359; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 232 - 633
Target Start/End: Complemental strand, 8913 - 8509
Alignment:
| Q |
232 |
caagttaatttttgttaaaaaa-gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttca |
330 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8913 |
caagttaatttttgttaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttca |
8814 |
T |
|
| Q |
331 |
ttccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaatt |
430 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8813 |
ttccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacatatcagcctaaacaccaatt |
8714 |
T |
|
| Q |
431 |
caaaaccaaattctca-ttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcattaacaatattt |
528 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
8713 |
caaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatattt |
8614 |
T |
|
| Q |
529 |
ttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaat |
628 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| |||| |
|
|
| T |
8613 |
ttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacgaaat |
8514 |
T |
|
| Q |
629 |
agtgt |
633 |
Q |
| |
|
||||| |
|
|
| T |
8513 |
agtgt |
8509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 330; Significance: 0; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 248 - 633
Target Start/End: Complemental strand, 21299526 - 21299138
Alignment:
| Q |
248 |
aaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcat |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21299526 |
aaaaaagtgagtaattgctctttaggttctggattggacctagtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcat |
21299427 |
T |
|
| Q |
348 |
tttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctca- |
446 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
21299426 |
tttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaccaaattctcat |
21299327 |
T |
|
| Q |
447 |
-ttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcattaacaatatttttagttcatttcttgt |
544 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21299326 |
tttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgt |
21299227 |
T |
|
| Q |
545 |
gttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
21299226 |
gttttgtgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgt |
21299138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 411 - 626
Target Start/End: Original strand, 9344211 - 9344424
Alignment:
| Q |
411 |
aatcagcctaaacaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcctttggcacacc |
510 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
9344211 |
aatcagccaaaacaccaattcaaaaccaaattctcgttttcaactcaaatcatcgtcaaaatcaatcctaatacataattttcgtttcttttggcaca-t |
9344309 |
T |
|
| Q |
511 |
ctttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatac |
610 |
Q |
| |
|
| |||||||| |||||| || || ||||| || |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
9344310 |
cattcattaa-aatattatttgtccatttattttgttttgtgcctataattaatatttcagcaagcaacttttatcaattcataattaaaagtcaaatat |
9344408 |
T |
|
| Q |
611 |
aaacaagtttcacaaa |
626 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
9344409 |
gaacaattttcacaaa |
9344424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 262 - 394
Target Start/End: Original strand, 12639454 - 12639586
Alignment:
| Q |
262 |
ttgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttctaggattaga |
361 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
12639454 |
ttgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattctatagacttatcattttctaggattaga |
12639553 |
T |
|
| Q |
362 |
aagtgtggcgtccctaaactctccatttcattt |
394 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |
|
|
| T |
12639554 |
aagtgtggcgtccctaaactctccattccattt |
12639586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 12639329 - 12639439
Alignment:
| Q |
46 |
agaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatgatagattaatttggctg |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12639329 |
agaccagccaccctcattcattgatttgtcttgtaactatttcttgtatttatgttaatttacttcagccataggaaataatgatagattaatttggctg |
12639428 |
T |
|
| Q |
146 |
aaggaatctta |
156 |
Q |
| |
|
||| ||||||| |
|
|
| T |
12639429 |
aagaaatctta |
12639439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 638 - 694
Target Start/End: Original strand, 12639586 - 12639642
Alignment:
| Q |
638 |
tattgaatggttggctgtacaaataatctttcattttggattatcacgtttcaaatg |
694 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
12639586 |
tattgaatggttggctgtacaaataatctttcattttggattatcatgtttcaaatg |
12639642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 30518326 - 30518262
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttctt |
397 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
30518326 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccatttcatttctt |
30518262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 18553447 - 18553491
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
18553447 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
18553491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 18781863 - 18781907
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
18781863 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
18781907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 20417594 - 20417550
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
20417594 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
20417550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 20419680 - 20419636
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
20419680 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
20419636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 20414947 - 20414903
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
20414947 |
tccatagacttatcactttcttagattagaaagtgtggcgtccct |
20414903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 314; Significance: 1e-177; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 260 - 633
Target Start/End: Original strand, 44794703 - 44795079
Alignment:
| Q |
260 |
aattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttctaggatta |
359 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44794703 |
aattgctctttaggttctggattggacctagtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttctaggatta |
44794802 |
T |
|
| Q |
360 |
gaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctca--ttttcaactca |
457 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
44794803 |
gaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccatagatcagcctaaacaccaattcaaaaccaaattctcattttttcaactca |
44794902 |
T |
|
| Q |
458 |
aatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctt |
556 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44794903 |
aatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctt |
44795002 |
T |
|
| Q |
557 |
taattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
44795003 |
taattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgt |
44795079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 393 - 633
Target Start/End: Complemental strand, 21465252 - 21465011
Alignment:
| Q |
393 |
ttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataatttt |
492 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21465252 |
ttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaatcaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataatttt |
21465153 |
T |
|
| Q |
493 |
cgtttccttt-ggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattc |
591 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21465152 |
cgtttctttttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattc |
21465053 |
T |
|
| Q |
592 |
ataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
|||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
21465052 |
ataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
21465011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 417 - 633
Target Start/End: Complemental strand, 44794716 - 44794496
Alignment:
| Q |
417 |
cctaaacaccaattcaaaaccaaattctcatttt---caactcaaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccct |
512 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
44794716 |
cctaaagagcaattcaaaaccaaattctcatttttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccct |
44794617 |
T |
|
| Q |
513 |
ttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaa |
612 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| | |
|
|
| T |
44794616 |
ttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatga |
44794517 |
T |
|
| Q |
613 |
acaagtttcacaaaatagtgt |
633 |
Q |
| |
|
|||| |||||||||||||||| |
|
|
| T |
44794516 |
acaattttcacaaaatagtgt |
44794496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 6050264 - 6050220
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
6050264 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
6050220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 15409909 - 15409953
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
15409909 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
15409953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 362 - 633
Target Start/End: Original strand, 127083 - 127359
Alignment:
| Q |
362 |
aagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaa--ccaaattctcatttt-caactc-a |
457 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| | |
|
|
| T |
127083 |
aagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaaaccaaattctcatttttcaactcca |
127182 |
T |
|
| Q |
458 |
aatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctt |
556 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
127183 |
aatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcttt |
127282 |
T |
|
| Q |
557 |
taattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
633 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
127283 |
taattaaactttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgt |
127359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0076
Description:
Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 54881 - 54926
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtcccta |
377 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
54881 |
tccatagacttatcactttcttggattagaaagtgtggcgtcccta |
54926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0585 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0585
Description:
Target: scaffold0585; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 914 - 870
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
914 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0146 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0146
Description:
Target: scaffold0146; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 6725 - 6769
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
6725 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
6769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 22656 - 22612
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
22656 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
22612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 33327 - 33371
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
33327 |
tccatagacttatcaatttcttggattagaaagtgtggcgtccct |
33371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 136867 - 136911
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
136867 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
136911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0075 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0075
Description:
Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 25802 - 25758
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
|||||| |||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
25802 |
tccatatacttatcactttcttggattagaaagtgtggcgtccct |
25758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 4635 - 4591
Alignment:
| Q |
332 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
4635 |
tccatagacttatcactttcttggattagaaagtgtggcatccct |
4591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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