View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19632_low_2 (Length: 687)
Name: NF19632_low_2
Description: NF19632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19632_low_2 |
 | |
|
| [»] scaffold0671 (1 HSPs) |
| | |
|
| [»] scaffold0065 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0359 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0076 (1 HSPs) |
| | |
|
| [»] scaffold0585 (1 HSPs) |
| | |
|
| [»] scaffold0146 (1 HSPs) |
| | |
|
| [»] scaffold0096 (1 HSPs) |
| | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0010 (1 HSPs) |
| | |
|
| [»] scaffold0075 (1 HSPs) |
| | |
|
| [»] scaffold0017 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 521; Significance: 0; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 521; E-Value: 0
Query Start/End: Original strand, 8 - 612
Target Start/End: Complemental strand, 21368997 - 21368387
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21368997 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgttaccattttttgtattcatgttaatttacttcagccataggaaataatg |
21368898 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattga |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
21368897 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattga |
21368798 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggt |
301 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21368797 |
ataaaaagg-aagttaatttttgttaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggt |
21368699 |
T |
|
| Q |
302 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaa |
401 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
21368698 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcatccctaaactctccattccatttcttgtttgaaaccacaaatcagcctaaa |
21368599 |
T |
|
| Q |
402 |
caccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcattaac |
500 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21368598 |
caccaattcaaaactaaattctaattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttccttttggcacaccctttcattaac |
21368499 |
T |
|
| Q |
501 |
aatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttc |
600 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| |||| |
|
|
| T |
21368498 |
aatatttttagttcatttcctgtgttttgtgcctttaattaatctttcagcaaacaacttttatcaattcataattaaaagtcaaatatgaacaattttc |
21368399 |
T |
|
| Q |
601 |
acaaaatagtgt |
612 |
Q |
| |
|
|||||||||||| |
|
|
| T |
21368398 |
acaaaatagtgt |
21368387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 8 - 612
Target Start/End: Original strand, 16156756 - 16157359
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16156756 |
catcatcatgatcatcaagaccagccac--------attgatttgtcgtgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
16156847 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattga |
201 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16156848 |
atagattaatttggcggaaggaatcctaagagttatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattga |
16156946 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaa--aagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtg |
299 |
Q |
| |
|
|||||| | |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16156947 |
ataaaa-gacaagttaatttttgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtg |
16157045 |
T |
|
| Q |
300 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagccta |
399 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
16157046 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacaaatcagccta |
16157145 |
T |
|
| Q |
400 |
aacaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcatta |
498 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
16157146 |
aacaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcatttctttttggcacaccctttcatta |
16157245 |
T |
|
| Q |
499 |
acaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtt |
598 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |
|
|
| T |
16157246 |
acaatatttttagttcatttctagtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattt |
16157345 |
T |
|
| Q |
599 |
tcacaaaatagtgt |
612 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
16157346 |
tcacaaaatagtgt |
16157359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 8 - 605
Target Start/End: Complemental strand, 22708028 - 22707446
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
22708028 |
catcatcataatcatcaagaccaacca---tcattcattgatttgtcttgtaaccattttttatattgatgttaatttactttagccataggaaataatg |
22707932 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattga |
201 |
Q |
| |
|
|| ||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
22707931 |
attgattaattttgctgaaggaatcttaagtgttatttgccttttc-ctttgtaattcggcaagtgtcattcctacctatatataggacacgaaaattga |
22707833 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggt |
301 |
Q |
| |
|
||||||| ||||| | |||||||||||| | |||||||||||||||||||| || |||||||||||||| |||||||||||||||||||| |
|
|
| T |
22707832 |
ataaaaatt-aagttgaattttgttaaaaa-gcgagtaattgctctttaggttatgaattggaccttgtat---------caagaatcctttcttgtggt |
22707744 |
T |
|
| Q |
302 |
gatcttcatt-ccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaa |
400 |
Q |
| |
|
|||||| ||| |||||| ||||||| ||||||||||||||||||| |||||||||||||| || ||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
22707743 |
gatctttatttccataggcttatcagtttctaggattagaaagtgaggcgtccctaaactttctattgcatttcttgtttgaaaccacaaatcaacctaa |
22707644 |
T |
|
| Q |
401 |
acaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcattaa |
499 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||| | || ||| |
|
|
| T |
22707643 |
acaccaattcaaaaccaaattctcatt----attcaaatcattatcaaaattaatcccaatacataattttcttttccttttggcacatcatt---ataa |
22707551 |
T |
|
| Q |
500 |
caatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagttt |
599 |
Q |
| |
|
||||||||| | | ||||||||||||||||||||| ||| |||||||| | |||||||||||||||||||||||||||||||||| ||| |||||| ||| |
|
|
| T |
22707550 |
caatattttcattccatttcttgtgttttgtgcctataa-taatctttaatcaagcaacttttatcaattcataattaaaagtcaaatataaacaatttt |
22707452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 9595478 - 9595414
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttctt |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
9595478 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccatttcatttctt |
9595414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 9646441 - 9646377
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttctt |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
9646441 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccatttcatttctt |
9646377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 32706452 - 32706493
Alignment:
| Q |
314 |
atagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
32706452 |
atagacttatcactttcttggattagaaagtgtggtgtccct |
32706493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0671 (Bit Score: 502; Significance: 0; HSPs: 1)
Name: scaffold0671
Description:
Target: scaffold0671; HSP #1
Raw Score: 502; E-Value: 0
Query Start/End: Original strand, 8 - 612
Target Start/End: Original strand, 1847 - 2457
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1847 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
1946 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattga |
201 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
1947 |
atagattaatttggctgaaggaatcctaagagttatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattga |
2045 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaa-aagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtgg |
300 |
Q |
| |
|
|||||| | |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2046 |
ataaaa-gacaagttaatttttgttaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtgg |
2144 |
T |
|
| Q |
301 |
tgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaa |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||| |
|
|
| T |
2145 |
tgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctgcattccaattcttgtttgaaaccacaaatcagcctaa |
2244 |
T |
|
| Q |
401 |
acaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcattaa |
499 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |
|
|
| T |
2245 |
acaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacatgattttcgtttctttttggcacaccttttcattaa |
2344 |
T |
|
| Q |
500 |
caatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagttt |
599 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| |
|
|
| T |
2345 |
caatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaatttt |
2444 |
T |
|
| Q |
600 |
cacaaaatagtgt |
612 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
2445 |
ctcaaaatagtgt |
2457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 501; Significance: 0; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 501; E-Value: 0
Query Start/End: Original strand, 8 - 612
Target Start/End: Complemental strand, 33758322 - 33757712
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
33758322 |
catcatcatgatcatcaagaccagccactctcattcatttatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaatactg |
33758223 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctacctag------gacacgaaaattga |
201 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
33758222 |
atagattaatttggctgaag-aatcttaagagttatttgcattttttctttgtaattcaacaagtgtccctcctacctatatatatgacacgaaaattga |
33758124 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggt |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
33758123 |
ataaaaaggcaagttaatttttgttaaaaaagcgagtaattgctctttaggttctagattggaccttgtattgatcatataaagaatcctttcttgtggt |
33758024 |
T |
|
| Q |
302 |
gatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaa |
401 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
33758023 |
gatcttcattcaatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacaaatcagcctaaa |
33757924 |
T |
|
| Q |
402 |
caccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcattaac |
500 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
33757923 |
caccaattcaaaaccaaattataattttcaactcaaaccattgtcaaaattaatcccaatacataattttcgtttccttttggcacaccctttcattaac |
33757824 |
T |
|
| Q |
501 |
aatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttc |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||| |
|
|
| T |
33757823 |
aatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttc |
33757724 |
T |
|
| Q |
601 |
acaaaatagtgt |
612 |
Q |
| |
|
|||||||||||| |
|
|
| T |
33757723 |
acaaaatagtgt |
33757712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 8 - 612
Target Start/End: Complemental strand, 13180244 - 13179629
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13180244 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
13180145 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattga |
201 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13180144 |
atagattaatttggctgaaggaatcctaagagctatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattga |
13180046 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaaaa--gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtg |
299 |
Q |
| |
|
|||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13180045 |
ataaaa-gacaagttaattttcgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtg |
13179947 |
T |
|
| Q |
300 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagccta |
399 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
13179946 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagccta |
13179847 |
T |
|
| Q |
400 |
aacaccaattc--aaaaccaaattctca-ttttcaact-caaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttc |
494 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
13179846 |
aacaccaattcaaaaaaccaaattctcatttttcaactccaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttc |
13179747 |
T |
|
| Q |
495 |
attaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaaca |
594 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
13179746 |
attaacaatatttttagttcatttcttgtgttttgtgcttttaattaaactttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaaca |
13179647 |
T |
|
| Q |
595 |
agtttcacaaaatagtgt |
612 |
Q |
| |
|
| |||||||||||||||| |
|
|
| T |
13179646 |
attttcacaaaatagtgt |
13179629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 8 - 612
Target Start/End: Complemental strand, 13184902 - 13184287
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13184902 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
13184803 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattga |
201 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13184802 |
atagattaatttggctgaaggaatcctaagagctatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattga |
13184704 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaaaa--gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtg |
299 |
Q |
| |
|
|||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13184703 |
ataaaa-gacaagttaattttcgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtg |
13184605 |
T |
|
| Q |
300 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagccta |
399 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
13184604 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagccta |
13184505 |
T |
|
| Q |
400 |
aacaccaattc--aaaaccaaattctca-ttttcaact-caaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttc |
494 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
13184504 |
aacaccaattcaaaaaaccaaattctcatttttcaactccaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttc |
13184405 |
T |
|
| Q |
495 |
attaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaaca |
594 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
13184404 |
attaacaatatttttagttcatttcttgtgttttgtgcttttaattaaactttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaaca |
13184305 |
T |
|
| Q |
595 |
agtttcacaaaatagtgt |
612 |
Q |
| |
|
| |||||||||||||||| |
|
|
| T |
13184304 |
attttcacaaaatagtgt |
13184287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 272 - 355
Target Start/End: Complemental strand, 16019535 - 16019451
Alignment:
| Q |
272 |
ttgatcatatcaagaatcctttcttgtggtgatcttc-attccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || || ||| |||||||||| ||||| |||||||||||||| | |||||| |
|
|
| T |
16019535 |
ttgatcatatcaagaatcctttcttgtggtgatcctcaatcccagagacttatcactttcttggattagaaagtgtagtgtccct |
16019451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 5553584 - 5553626
Alignment:
| Q |
313 |
catagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
5553584 |
catagacttatcactttcttggattagaaagtgtggcgtccct |
5553626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 311 - 352
Target Start/End: Original strand, 22271244 - 22271285
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtc |
352 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
22271244 |
tccatagacttatcactttctgggattagaaagtgtggcgtc |
22271285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 500; Significance: 0; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 500; E-Value: 0
Query Start/End: Original strand, 8 - 612
Target Start/End: Original strand, 37260129 - 37260740
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37260129 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
37260228 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattga |
201 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37260229 |
atagattaatttggatgaaggaatcctaagagttatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaattga |
37260327 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaa--aagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtg |
299 |
Q |
| |
|
|||||| | |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37260328 |
ataaaa-gacaagttaatttttgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtg |
37260426 |
T |
|
| Q |
300 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagccta |
399 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||| |
|
|
| T |
37260427 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccaattcttgtttgaaaccacgaatcagccta |
37260526 |
T |
|
| Q |
400 |
aacaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcatta |
498 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
37260527 |
aacaccaattcaaaatcaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttctttttggcacaccctttcattg |
37260626 |
T |
|
| Q |
499 |
acaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtt |
598 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |
|
|
| T |
37260627 |
acaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattt |
37260726 |
T |
|
| Q |
599 |
tcacaaaatagtgt |
612 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
37260727 |
tcacaaaatagtgt |
37260740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 6473884 - 6473928
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
6473884 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
6473928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 22062186 - 22062142
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
22062186 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
22062142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 310 - 353
Target Start/End: Complemental strand, 20190474 - 20190431
Alignment:
| Q |
310 |
ttccatagacttatcattttctaggattagaaagtgtggcgtcc |
353 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
20190474 |
ttccatagacttatcagtttcttggattagaaagtgtggcgtcc |
20190431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 20127181 - 20127225
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
20127181 |
tccatagacttatcgctttcttggattagaaagtgtggcgtccct |
20127225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 498; Significance: 0; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 8 - 612
Target Start/End: Complemental strand, 22821651 - 22821039
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
22821651 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttgttgtattcatgttaatttacttcaaccataggaaataatg |
22821552 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattga |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
22821551 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttttaattcggcaagtgtccctcctacctatatataggacacggaaattga |
22821452 |
T |
|
| Q |
202 |
ataaaaagg-caagttaatttttgttaaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtgg |
300 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
22821451 |
ataaaaagggcaagttaatttttgttaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgggg |
22821352 |
T |
|
| Q |
301 |
tgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaa |
400 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
22821351 |
tgaacttcattccatagacttatcattttctaagattagaaagtgtggcgttcctaaactctccattccatttcttgtttgaaaccacaaatcagcctaa |
22821252 |
T |
|
| Q |
401 |
acaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcattaa |
499 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22821251 |
acaccaattcaaaaccaaattctcattttcaactcaattcattgccaaaattaatcccaatacataattttcgtttccttttggcacaccctttcattaa |
22821152 |
T |
|
| Q |
500 |
caatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagttt |
599 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| ||| |
|
|
| T |
22821151 |
caatatttttagttcatttcttgtgttttgtacctttaattaatctttcagcaagcaacttttatcaattcataattataagtcaaatatgaacaatttt |
22821052 |
T |
|
| Q |
600 |
cacaaaatagtgt |
612 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22821051 |
cacaaaatagtgt |
22821039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 272 - 355
Target Start/End: Complemental strand, 11126497 - 11126413
Alignment:
| Q |
272 |
ttgatcatatcaagaatcctttcttgtggtgatcttc-attccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || || ||||||||||| || ||||| ||||||||||||||||| ||||| |
|
|
| T |
11126497 |
ttgatcatatcaagaatcctttcttgtggtgatcctcaatcccatagacttaccactttcttggattagaaagtgtggcatccct |
11126413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 29951844 - 29951909
Alignment:
| Q |
291 |
tttcttgtggtgatcttcat-tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
29951844 |
tttcttgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccct |
29951909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 244482 - 244438
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
244482 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
244438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 29950227 - 29950271
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
29950227 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
29950271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 4568361 - 4568405
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
4568361 |
tccatagacttatcacttttttggattagaaagtgtggcgtccct |
4568405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0065 (Bit Score: 496; Significance: 0; HSPs: 1)
Name: scaffold0065
Description:
Target: scaffold0065; HSP #1
Raw Score: 496; E-Value: 0
Query Start/End: Original strand, 8 - 612
Target Start/End: Complemental strand, 34134 - 33522
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
34134 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttactccagccttaggaaataatg |
34035 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattga |
201 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| |
|
|
| T |
34034 |
atggattaatttggctgaaggaatcctaagagttatttgcattttttctttgtaattcagcaagtgtccctcctatctatatataggacacaaaaattga |
33935 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaaaa--gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtg |
299 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
33934 |
ataaaaagg-aagttaatttttgttaaaaaaaagtgagtaattgctctttaggttctggattggacattgtattgatcatatcaagaatcctttcttgtg |
33836 |
T |
|
| Q |
300 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagccta |
399 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
33835 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactcttcattccatttcttgtttgaaaccacaaatcagccta |
33736 |
T |
|
| Q |
400 |
aacaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcatta |
498 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
33735 |
aacaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaaataatcccaatgcataattttcgtttccttttggcacaccctttcatta |
33636 |
T |
|
| Q |
499 |
acaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtt |
598 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |
|
|
| T |
33635 |
acaataattttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattt |
33536 |
T |
|
| Q |
599 |
tcacaaaatagtgt |
612 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
33535 |
tcacaaaatagtgt |
33522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 486; Significance: 0; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 8 - 612
Target Start/End: Original strand, 11475365 - 11475975
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11475365 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagctttaggaaataatg |
11475464 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctacct------aggacacgaaaattga |
201 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
11475465 |
atagattaatttggctgaaggaatcctaagagttatttgcatattt-ctttgtaattcagcaagtgtccctcctacctttatataggacacgaaaattga |
11475563 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaa-aagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtgg |
300 |
Q |
| |
|
|||||| | |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11475564 |
ataaaa-gacaagttaatttttgttaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtgg |
11475662 |
T |
|
| Q |
301 |
tgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaa |
400 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
11475663 |
tgatcttcattccatggacttatcattttctaggattagaaagtgtggcgtctctaaactctccattccatttcttgtctgaaaccacaaatcagcctaa |
11475762 |
T |
|
| Q |
401 |
acaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcattaa |
499 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
11475763 |
acaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttctttttggcacaccctttcattaa |
11475862 |
T |
|
| Q |
500 |
caatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagttt |
599 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||| ||| |
|
|
| T |
11475863 |
caatatttttagttcatttcttaagttttgtgcctttaattaatctttcagcaatcaacttttatcaattcataattaaaagtcaaatatgaacaatttt |
11475962 |
T |
|
| Q |
600 |
cacaaaatagtgt |
612 |
Q |
| |
|
||||||||||||| |
|
|
| T |
11475963 |
cacaaaatagtgt |
11475975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 227 - 612
Target Start/End: Original strand, 34455684 - 34456073
Alignment:
| Q |
227 |
aaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattcc-atagacttatca |
325 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||| |
|
|
| T |
34455684 |
aaaaaagtgagtaactgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattcccacaaacttatca |
34455783 |
T |
|
| Q |
326 |
ttttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctca |
425 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| || |
|
|
| T |
34455784 |
ttttctacgattagaaagtgtggcgtccctaaaccctccattccatttcttgtttgaatccacaaatcagcctaaacacctattcaaatccaaattatcg |
34455883 |
T |
|
| Q |
426 |
ttttcaactcaaatcattgtc-aaaattaatcccaatacataattttcgt-ttcctttggcacaccctttcattaacaatatttttagttcatttcttgt |
523 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||| ||||||||| | ||||||| ||||| | ||||||| |||||||||| ||| ||||||| | |
|
|
| T |
34455884 |
ttttcaactcaaacaattgtcaaaaattaatcccaatatataattttcatgttccttttgcacatcatttcattcacaatattttcagtctatttcttat |
34455983 |
T |
|
| Q |
524 |
gttttgtgcctttaattaatctttcagcaagcaac-ttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
612 |
Q |
| |
|
||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||| |||||||||| ||||| |
|
|
| T |
34455984 |
gttttgtgcctatatttaatctttcagcaagcaactttttaccaattcataattaaaagtcaaatatgaacaattttcacaaaacagtgt |
34456073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 17266760 - 17266695
Alignment:
| Q |
291 |
tttcttgtggtgatcttcat-tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
17266760 |
tttcttgtggtgatcctcgcatccatagacttatcactttcttggattagaaagtgtggcgtccct |
17266695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 9167295 - 9167339
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
9167295 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
9167339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 15017684 - 15017640
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
15017684 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
15017640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 15019324 - 15019280
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
15019324 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
15019280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 39488191 - 39488147
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
39488191 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
39488147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 314 - 376
Target Start/End: Original strand, 34098832 - 34098893
Alignment:
| Q |
314 |
atagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttctt |
376 |
Q |
| |
|
|||||||||||| ||| | ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
34098832 |
atagacttatcactttattggattagaaagtgtggcgtccct-gtctatccatttcatttctt |
34098893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 485; Significance: 0; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 485; E-Value: 0
Query Start/End: Original strand, 8 - 612
Target Start/End: Complemental strand, 18774658 - 18774046
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18774658 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
18774559 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctaccta------ggacacgaaaattga |
201 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| || |
|
|
| T |
18774558 |
atagattaatttggctgaaggaatcctaagagctatttgcattttt-ctttgtaattcagcaagtgtccctcctacctatatataggacacgaaaatgga |
18774460 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaaaa--gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtg |
299 |
Q |
| |
|
|||||| | |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18774459 |
ataaaa-gacaagttaatttttgttaaaaaaaagtgagtaattgctctttaggttctggattggacctagtattgatcatatcaagaatcctttcttgtg |
18774361 |
T |
|
| Q |
300 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagccta |
399 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
18774360 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagccta |
18774261 |
T |
|
| Q |
400 |
aacaccaattcaaaaccaaattctca-ttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcatt |
497 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
18774260 |
aacaccaattcaaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcatt |
18774161 |
T |
|
| Q |
498 |
aacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagt |
597 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| | ||| | |
|
|
| T |
18774160 |
aacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttctgcaagcaatttttatcaattcataattaaaagtcaaatatgatcaatt |
18774061 |
T |
|
| Q |
598 |
ttcacaaaatagtgt |
612 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
18774060 |
ttcacaaaatagtgt |
18774046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 205 - 612
Target Start/End: Complemental strand, 16417708 - 16417298
Alignment:
| Q |
205 |
aaaaggcaagttaatttttgttaaaaaa--gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtg |
302 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16417708 |
aaaagacaagttaatttttgttaaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtg |
16417609 |
T |
|
| Q |
303 |
atcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaac |
402 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
16417608 |
atcttcattccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgattgaaaccacaaatcagcctaaac |
16417509 |
T |
|
| Q |
403 |
accaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcattaaca |
501 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
16417508 |
accaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatctcaatacataattttcgtttctttttggcacaccctttcattaaca |
16417409 |
T |
|
| Q |
502 |
atatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttca |
601 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| |
|
|
| T |
16417408 |
atatttttagttcatttcttgtgttttgcgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttca |
16417309 |
T |
|
| Q |
602 |
caaaatagtgt |
612 |
Q |
| |
|
|||||||||| |
|
|
| T |
16417308 |
taaaatagtgt |
16417298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 8 - 348
Target Start/End: Complemental strand, 17462721 - 17462373
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
17462721 |
catcatcatgatcatcaagaccagacaccctaattcattgatttgtcttgaaaccatttcttgtattcatgttaatttacttcagccataggaaataacg |
17462622 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcatt-ttttctttgtaattcagcaagtgtccctcctacc------taggacacgaaaattg |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||||||||| |
|
|
| T |
17462621 |
atagattaatttggttgaaggaatcttaagagttatttgcatttttttctttgtaattcaacaagtgtccctcctacctatatataagacacgaaaattg |
17462522 |
T |
|
| Q |
201 |
aataaaaaggcaagttaatttttgttaaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcc-tttcttgtg |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17462521 |
aataaaaaggcaagttaatttttgttaaaaaagtgagtaattgctctttaggttcttgattggaccttgtattgatcatatcaagaatccttttcttgtg |
17462422 |
T |
|
| Q |
300 |
gtgatcttcattccatagacttatcattttctaggattagaaagtgtgg |
348 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17462421 |
gtgatcttcattccatagacttataattttctaggattagaaagtgtgg |
17462373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 344 - 612
Target Start/End: Complemental strand, 17459868 - 17459599
Alignment:
| Q |
344 |
tgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcattttcaactcaaatcatt |
443 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17459868 |
tgtggcgtccctaaactctccattctatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcattttcaactcaaatcatt |
17459769 |
T |
|
| Q |
444 |
gtcaaaattaatcccaatacataattttcgtttcc-tttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaa |
542 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||| | |||||||||| |
|
|
| T |
17459768 |
gtcaaaattaatcccaatacataattttcgtttccttttggcacaccctttcattaacaataattttagatcatttcttatgttttgagactttaattaa |
17459669 |
T |
|
| Q |
543 |
tctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
612 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
17459668 |
tctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
17459599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 8 - 259
Target Start/End: Complemental strand, 17470628 - 17470371
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17470628 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
17470529 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatcttaagagttatttgcattttttctttgtaattcagcaagtgtccctcctacc------taggacacgaaaattga |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
17470528 |
atagattaatttggctgaaggaatcttaagagttatttgcattttatatttgtaattcagcaagtgtccctcctacctatatataggacacaaaaattga |
17470429 |
T |
|
| Q |
202 |
ataaaaaggcaagttaatttttgttaaaaaagtgagtaattgctctttaggttctgca |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
17470428 |
ataaaaaggcaagttaatttttgttaaaaaagtgagtaattgctccttaggtgctgca |
17470371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 17465122 - 17465064
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccattt |
66 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17465122 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccattt |
17465064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 234 - 355
Target Start/End: Original strand, 18446160 - 18446280
Alignment:
| Q |
234 |
tgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattcc-atagacttatcattttcta |
332 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||| | ||||| |||||||||||| |||||||||||| || ||| ||| |||||||||||| ||||| |
|
|
| T |
18446160 |
tgagcaattgctcttt-ggttctggattggaccaatt-ttgattatatcaagaatcttttcttgtggtggtcctcaatcccatagacttatcactttctt |
18446257 |
T |
|
| Q |
333 |
ggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
18446258 |
ggattagaaagtgtggcgtccct |
18446280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 20730984 - 20731028
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
20730984 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
20731028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 227 - 612
Target Start/End: Original strand, 288909 - 289295
Alignment:
| Q |
227 |
aaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcat |
326 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
288909 |
aaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcat |
289008 |
T |
|
| Q |
327 |
tttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcat |
426 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
289009 |
tttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcat |
289108 |
T |
|
| Q |
427 |
tttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttc-ctttggcacaccctttcattaacaatatttttagttcatttcttgtgt |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
289109 |
tttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttctttttggcacaccctttcattaacaatatttttagttcatttcttgtgt |
289208 |
T |
|
| Q |
526 |
tttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
612 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
289209 |
tttgagcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
289295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0359 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: scaffold0359
Description:
Target: scaffold0359; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 211 - 612
Target Start/End: Complemental strand, 8913 - 8509
Alignment:
| Q |
211 |
caagttaatttttgttaaaaaa-gtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttca |
309 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8913 |
caagttaatttttgttaaaaaaagtgagtaattgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttca |
8814 |
T |
|
| Q |
310 |
ttccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaatt |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8813 |
ttccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacatatcagcctaaacaccaatt |
8714 |
T |
|
| Q |
410 |
caaaaccaaattctca-ttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcattaacaatattt |
507 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
8713 |
caaaaccaaattctcatttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatattt |
8614 |
T |
|
| Q |
508 |
ttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaat |
607 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| |||| |
|
|
| T |
8613 |
ttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcaaatatgaacaattttcacgaaat |
8514 |
T |
|
| Q |
608 |
agtgt |
612 |
Q |
| |
|
||||| |
|
|
| T |
8513 |
agtgt |
8509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 330; Significance: 0; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 227 - 612
Target Start/End: Complemental strand, 21299526 - 21299138
Alignment:
| Q |
227 |
aaaaaagtgagtaattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcat |
326 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21299526 |
aaaaaagtgagtaattgctctttaggttctggattggacctagtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcat |
21299427 |
T |
|
| Q |
327 |
tttctaggattagaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctca- |
425 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
21299426 |
tttctaggattagaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaccaaattctcat |
21299327 |
T |
|
| Q |
426 |
-ttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcattaacaatatttttagttcatttcttgt |
523 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21299326 |
tttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgt |
21299227 |
T |
|
| Q |
524 |
gttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
612 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
21299226 |
gttttgtgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgt |
21299138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 390 - 605
Target Start/End: Original strand, 9344211 - 9344424
Alignment:
| Q |
390 |
aatcagcctaaacaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcctttggcacacc |
489 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
9344211 |
aatcagccaaaacaccaattcaaaaccaaattctcgttttcaactcaaatcatcgtcaaaatcaatcctaatacataattttcgtttcttttggcaca-t |
9344309 |
T |
|
| Q |
490 |
ctttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatac |
589 |
Q |
| |
|
| |||||||| |||||| || || ||||| || |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
9344310 |
cattcattaa-aatattatttgtccatttattttgttttgtgcctataattaatatttcagcaagcaacttttatcaattcataattaaaagtcaaatat |
9344408 |
T |
|
| Q |
590 |
aaacaagtttcacaaa |
605 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
9344409 |
gaacaattttcacaaa |
9344424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 241 - 373
Target Start/End: Original strand, 12639454 - 12639586
Alignment:
| Q |
241 |
ttgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttctaggattaga |
340 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
12639454 |
ttgctctttaggttctggattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattctatagacttatcattttctaggattaga |
12639553 |
T |
|
| Q |
341 |
aagtgtggcgtccctaaactctccatttcattt |
373 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |
|
|
| T |
12639554 |
aagtgtggcgtccctaaactctccattccattt |
12639586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 12639312 - 12639439
Alignment:
| Q |
8 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaaccatttcttgtattcatgttaatttacttcagccataggaaataatg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12639312 |
catcatcatgatcatcaagaccagccaccctcattcattgatttgtcttgtaactatttcttgtatttatgttaatttacttcagccataggaaataatg |
12639411 |
T |
|
| Q |
108 |
atagattaatttggctgaaggaatctta |
135 |
Q |
| |
|
|||||||||||||||||||| ||||||| |
|
|
| T |
12639412 |
atagattaatttggctgaagaaatctta |
12639439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 673
Target Start/End: Original strand, 12639586 - 12639642
Alignment:
| Q |
617 |
tattgaatggttggctgtacaaataatctttcattttggattatcacgtttcaaatg |
673 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
12639586 |
tattgaatggttggctgtacaaataatctttcattttggattatcatgtttcaaatg |
12639642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 30518326 - 30518262
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccctaaactctccatttcatttctt |
376 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
30518326 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct-gtctatccatttcatttctt |
30518262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 18553447 - 18553491
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
18553447 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
18553491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 18781863 - 18781907
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
18781863 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
18781907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 20417594 - 20417550
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
20417594 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
20417550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 20419680 - 20419636
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
20419680 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
20419636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 20414947 - 20414903
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
20414947 |
tccatagacttatcactttcttagattagaaagtgtggcgtccct |
20414903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 314; Significance: 1e-177; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 239 - 612
Target Start/End: Original strand, 44794703 - 44795079
Alignment:
| Q |
239 |
aattgctctttaggttctgcattggaccttgtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttctaggatta |
338 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44794703 |
aattgctctttaggttctggattggacctagtattgatcatatcaagaatcctttcttgtggtgatcttcattccatagacttatcattttctaggatta |
44794802 |
T |
|
| Q |
339 |
gaaagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctca--ttttcaactca |
436 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
44794803 |
gaaagtgtggcgtccctaaactctccattccatttcttgtttgaaaccatagatcagcctaaacaccaattcaaaaccaaattctcattttttcaactca |
44794902 |
T |
|
| Q |
437 |
aatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctt |
535 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44794903 |
aatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctt |
44795002 |
T |
|
| Q |
536 |
taattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
612 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
44795003 |
taattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgt |
44795079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 372 - 612
Target Start/End: Complemental strand, 21465252 - 21465011
Alignment:
| Q |
372 |
ttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaaccaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataatttt |
471 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21465252 |
ttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaatcaaattctcattttcaactcaaatcattgtcaaaattaatcccaatacataatttt |
21465153 |
T |
|
| Q |
472 |
cgtttccttt-ggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattc |
570 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21465152 |
cgtttctttttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattc |
21465053 |
T |
|
| Q |
571 |
ataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
612 |
Q |
| |
|
|||||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
21465052 |
ataattaaaagtcaaatatgaacaattttcacaaaatagtgt |
21465011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 396 - 612
Target Start/End: Complemental strand, 44794716 - 44794496
Alignment:
| Q |
396 |
cctaaacaccaattcaaaaccaaattctcatttt---caactcaaatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccct |
491 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
44794716 |
cctaaagagcaattcaaaaccaaattctcatttttttcaactcaaatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccct |
44794617 |
T |
|
| Q |
492 |
ttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaa |
591 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| | |
|
|
| T |
44794616 |
ttcattaacaatatttttagttcatttcttgtgttttgtgcctttaattaatctttcagcaagcaacttttatcaattcatgattaaaagtcaaatatga |
44794517 |
T |
|
| Q |
592 |
acaagtttcacaaaatagtgt |
612 |
Q |
| |
|
|||| |||||||||||||||| |
|
|
| T |
44794516 |
acaattttcacaaaatagtgt |
44794496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 6050264 - 6050220
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
6050264 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
6050220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 15409909 - 15409953
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
15409909 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
15409953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 341 - 612
Target Start/End: Original strand, 127083 - 127359
Alignment:
| Q |
341 |
aagtgtggcgtccctaaactctccatttcatttcttgtttgaaaccacaaatcagcctaaacaccaattcaaaa--ccaaattctcatttt-caactc-a |
436 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||| | |
|
|
| T |
127083 |
aagtgtggcgtccctaaactctccattccatttcttgtttgaaaccacagatcagcctaaacaccaattcaaaaaaccaaattctcatttttcaactcca |
127182 |
T |
|
| Q |
437 |
aatcattgtcaaaattaatcccaatacataattttcgtttcct-ttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcctt |
535 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
127183 |
aatcattgtcaaaattaatcccaatacataattttcgtttcttgttggcacaccctttcattaacaatatttttagttcatttcttgtgttttgtgcttt |
127282 |
T |
|
| Q |
536 |
taattaatctttcagcaagcaacttttatcaattcataattaaaagtcacatacaaacaagtttcacaaaatagtgt |
612 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
127283 |
taattaaactttcagcaagcaacttttatcaattcatgattaaaagtcaaatatgaacaattttcacaaaatagtgt |
127359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0076
Description:
Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 54881 - 54926
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtcccta |
356 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
54881 |
tccatagacttatcactttcttggattagaaagtgtggcgtcccta |
54926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0585 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0585
Description:
Target: scaffold0585; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 914 - 870
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
914 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0146 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0146
Description:
Target: scaffold0146; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 6725 - 6769
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
6725 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
6769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 22656 - 22612
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
22656 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
22612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 33327 - 33371
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
33327 |
tccatagacttatcaatttcttggattagaaagtgtggcgtccct |
33371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 136867 - 136911
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
136867 |
tccatagacttatcactttcttggattagaaagtgtggcgtccct |
136911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0075 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0075
Description:
Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 25802 - 25758
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
|||||| |||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
25802 |
tccatatacttatcactttcttggattagaaagtgtggcgtccct |
25758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 4635 - 4591
Alignment:
| Q |
311 |
tccatagacttatcattttctaggattagaaagtgtggcgtccct |
355 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
4635 |
tccatagacttatcactttcttggattagaaagtgtggcatccct |
4591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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