View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19633_low_10 (Length: 292)
Name: NF19633_low_10
Description: NF19633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19633_low_10 |
 | |
|
| [»] scaffold0090 (1 HSPs) |
| | |
|
| [»] scaffold0035 (1 HSPs) |
| | |
|
| [»] scaffold0485 (1 HSPs) |
| | |
|
| [»] scaffold0566 (1 HSPs) |
| | |
|
| [»] scaffold0222 (1 HSPs) |
| | |
|
| [»] scaffold0220 (1 HSPs) |
| | |
|
| [»] scaffold0113 (1 HSPs) |
| | |
|
| [»] scaffold0026 (1 HSPs) |
| | |
|
| [»] scaffold0012 (3 HSPs) |
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|
| [»] scaffold1184 (1 HSPs) |
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|
Alignment Details
Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 15349520 - 15349234
Alignment:
| Q |
1 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15349520 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtatgaatcaagggatcaagaggatagatgagaactattatctaaac |
15349421 |
T |
|
| Q |
101 |
ttttatactactttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctaccta |
200 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15349420 |
ttttatactactttgtcattccttaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctaccta |
15349321 |
T |
|
| Q |
201 |
attcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
287 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15349320 |
attcggacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
15349234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 14687454 - 14687162
Alignment:
| Q |
1 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaac |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
14687454 |
taatataatggtaggtggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagaggagaactattatctaaac |
14687355 |
T |
|
| Q |
101 |
ttttatact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattc |
194 |
Q |
| |
|
|| |||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| | |
|
|
| T |
14687354 |
ttatatactctcactactttgtcattccttagaacccatgaccctactcacaattaccaatataaatggagaattattagagctaattgtttgattatgc |
14687255 |
T |
|
| Q |
195 |
tacctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
287 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
14687254 |
tacctaattcggacattactaatccggaggcggtggaaaatttgctttatgttggtactaacccacaggtacaagataatgatgatgatgatg |
14687162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 24 - 284
Target Start/End: Complemental strand, 42711434 - 42711168
Alignment:
| Q |
24 |
tcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaacttttatact------actttgtc |
117 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| || ||||||| |||||| |||||| |||||||| |
|
|
| T |
42711434 |
tcacttttattgctaagaggtttagggtgagtgtgaatcaaaggatcaagaggatagatgaaaattattatccaaacttatatactctcactactttgtc |
42711335 |
T |
|
| Q |
118 |
attcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaat |
217 |
Q |
| |
|
||| ||| ||||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
42711334 |
tttccttagaacccatgaccatactcataattaccaatatgaatggagaattattagaactaattgtttgattattctacctaattcggacattactaat |
42711235 |
T |
|
| Q |
218 |
ccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42711234 |
ccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
42711168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 131 - 284
Target Start/End: Complemental strand, 11498159 - 11498006
Alignment:
| Q |
131 |
catgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtgg |
230 |
Q |
| |
|
||||||||| || |||||||||||||||| |||||| ||| | | |||||| ||||||||||||||||||||| | |||||||||||||||||||| | |
|
|
| T |
11498159 |
catgacccttctaacaattaccaatatgagtggagagtcaattatgttaattgcttgattattctacctaattcaaatattactaatccggaggtggtag |
11498060 |
T |
|
| Q |
231 |
aaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||| ||| |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
11498059 |
aaaacttggtttatgttggcactaacccacaggtacacaatgatggtgatgatg |
11498006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 131 - 284
Target Start/End: Complemental strand, 45240404 - 45240250
Alignment:
| Q |
131 |
catgaccctactcacaattaccaatatgaatggagaatcattagagctaa-ttgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
|||| |||| ||||||||||||||||||| |||||| ||| || ||||| ||| |||||||||||||| ||||| | |||||||||||||||||||| |
|
|
| T |
45240404 |
catggcccttctcacaattaccaatatgagtggagagtcaataacgctaaattgcttgattattctaccaaattcgaatattactaatccggaggtggta |
45240305 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| ||| |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
45240304 |
gaaaacttggtttatgttggcactaacccacaggtacacaatgatggtgatgatg |
45240250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 284
Target Start/End: Original strand, 18290701 - 18290841
Alignment:
| Q |
144 |
acaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaatttgcttta |
243 |
Q |
| |
|
|||||||||||||||| |||| | ||| || || |||| ||||||||||||||||||||||| |||||||||||||||||| | ||||| ||| |||| |
|
|
| T |
18290701 |
acaattaccaatatgagtggaaattcaataatgcaaatttattgattattctacctaattcagatattactaatccggaggtgatagaaaacttggttta |
18290800 |
T |
|
| Q |
244 |
tgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
18290801 |
tgttggcactaacccacaggtacacaatgatggtgatgatg |
18290841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 130 - 284
Target Start/End: Original strand, 10629417 - 10629568
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
||||| |||| ||||||||| ||||||||| |||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||||| ||| ||| |
|
|
| T |
10629417 |
ccatggcccttctcacaattcccaatatgagtggagagtcaataatgctaatttcttgattattctacctaattcagatattactaatccgaaggcggta |
10629516 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| | |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
10629517 |
gaaaact---tttatgttggcactaacccacaggtacacaatgatggtgatgatg |
10629568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 11918233 - 11918125
Alignment:
| Q |
141 |
ctcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaatttgct |
240 |
Q |
| |
|
||||||||||||||||||| |||| | ||| ||| ||||||| ||||||||||||||||||| | ||||| ||||| ||| ||||||||||||| ||| | |
|
|
| T |
11918233 |
ctcacaattaccaatatgagtggaaagtcaatagggctaatt-tttgattattctacctaatccggacataactaacccgaaggtggtggaaaaattgtt |
11918135 |
T |
|
| Q |
241 |
ttatgttggt |
250 |
Q |
| |
|
|||||||||| |
|
|
| T |
11918134 |
ttatgttggt |
11918125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 264; Significance: 1e-147; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 27045405 - 27045688
Alignment:
| Q |
1 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27045405 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtatgaatcaagggatcaagaggatagatgagaactattatctaaac |
27045504 |
T |
|
| Q |
101 |
ttttatactactttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctaccta |
200 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27045505 |
ttttatactactttgtcattccttaaaacccatgaccctactcacaattaccaatatgcatggagaatcattagagctaattgtttgattattctaccta |
27045604 |
T |
|
| Q |
201 |
attcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
27045605 |
attcggacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaaaatgatggtgatgatg |
27045688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 284
Target Start/End: Complemental strand, 21785986 - 21785836
Alignment:
| Q |
131 |
catgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtgg |
230 |
Q |
| |
|
|||| |||| || |||| |||||| |||| |||||| ||| || ||||||| |||||| |||||||||||||||| |||||||||||| ||||||| | |
|
|
| T |
21785986 |
catggcccttctaacaagtaccaacatgagtggagagtcaataatgctaatttcttgatttttctacctaattcagatattactaatccgaaggtggtag |
21785887 |
T |
|
| Q |
231 |
aaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||| | |||||||||| ||||||||||||||||| || |||||||||||| |
|
|
| T |
21785886 |
aaaact---tttatgttggcactaacccacaggtacacaataatggtgatgatg |
21785836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 22626567 - 22626469
Alignment:
| Q |
136 |
ccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaa |
234 |
Q |
| |
|
|||| ||||||||||||||||||| |||||| ||| || |||||||| |||||||||||||||||||| || ||||||||||||| |||||| ||||| |
|
|
| T |
22626567 |
cccttctcacaattaccaatatgagtggagagtcaataatgctaattgcttgattattctacctaattcggatattactaatccggtggtggtagaaaa |
22626469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 540435 - 540152
Alignment:
| Q |
1 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaac |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
540435 |
taatataatggtggatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaac |
540336 |
T |
|
| Q |
101 |
ttttatactactttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctaccta |
200 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
540335 |
ttttatactactttgtcattccttaaaacccatgaccctactcacaattaccaatatgaaaggagaatcattaaagctaattgtttgattattctaccta |
540236 |
T |
|
| Q |
201 |
attcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
540235 |
attcggacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaaaatgatggtgatgatg |
540152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 5 - 285
Target Start/End: Complemental strand, 16327445 - 16327159
Alignment:
| Q |
5 |
ataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactttt |
104 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||| | |
|
|
| T |
16327445 |
ataatggcaggtggaatcatcacttttattgctaagaggtttagggtgagtgtgaatcaagggatcaagaggatagaggaaaactattatctaaacttat |
16327346 |
T |
|
| Q |
105 |
atact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacc |
198 |
Q |
| |
|
||||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
16327345 |
atactcttactactttgtccttccttataacccatgaccctactcacaattaccaatatgaatggagaattattagagctaattgtttgactattctacc |
16327246 |
T |
|
| Q |
199 |
taattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatga |
285 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
16327245 |
taattcggacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtggtgatga |
16327159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 9729288 - 9729578
Alignment:
| Q |
3 |
atataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactt |
102 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| || ||||||| |||||| |
|
|
| T |
9729288 |
atataatggtaggtggaatcatcacttttattgctaagaggtttagggtgagtgtgaatcaagggatcaagaggatagatgaaaattattatccaaactt |
9729387 |
T |
|
| Q |
103 |
ttatact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattcta |
196 |
Q |
| |
|
|||||| |||||||| ||| ||| ||||||||||| |||||||||||| |||||||||||||| || |||||| |||||||||||||||||||| |
|
|
| T |
9729388 |
atatactctcactactttgtctttccttagaacccatgaccatactcacaattatcaatatgaatggaggattattagaactaattgtttgattattcta |
9729487 |
T |
|
| Q |
197 |
cctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
287 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9729488 |
cctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaatccacaggtacaagatgatggtgatgatgatg |
9729578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 287
Target Start/End: Original strand, 9581436 - 9581726
Alignment:
| Q |
3 |
atataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactt |
102 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| || ||||||| |||||| |
|
|
| T |
9581436 |
atataatggtaggtggaatcatcacttttattgctaagaggtttagggtgagtgtgaatcaagggatcaagaggatagatgaaaattattatccaaactt |
9581535 |
T |
|
| Q |
103 |
ttatact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattcta |
196 |
Q |
| |
|
|||||| |||||||| ||| ||| ||||||||||| |||||||||||| |||||||||||||| || |||||| |||||||||||||||||||| |
|
|
| T |
9581536 |
atatactctcactactttgtctttccttagaacccatgaccatactcacaattatcaatatgaatggaggattattagaactaattgtttgattattcta |
9581635 |
T |
|
| Q |
197 |
cctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
287 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9581636 |
cctaattcggacattactaatctggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
9581726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 3 - 284
Target Start/End: Original strand, 4311262 - 4311548
Alignment:
| Q |
3 |
atataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactt |
102 |
Q |
| |
|
||||| |||||| |||||||||||| |||||| ||| ||||||||||| |||||||||||||| ||||||||||||||| | ||||||||||||| |||| |
|
|
| T |
4311262 |
atatagtggtaggtggaatcatcacctttatttctaggaagtttgggg-gagtgtgaatcaagagatcaagaggatagaggggaactattatctagactt |
4311360 |
T |
|
| Q |
103 |
ttatact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattcta |
196 |
Q |
| |
|
|||||| |||||||| || ||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4311361 |
atatactctcactactttgtcctttcttagaacccatggccctactcacaattaccaatatgaatggagaattattagagctaattgtttgattattcta |
4311460 |
T |
|
| Q |
197 |
cctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4311461 |
cctaattcggacattactaatccggaggtggtggaaaatttgctttacgttggtactaacccacatgtacaagatgatggtgatgatg |
4311548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 3 - 285
Target Start/End: Complemental strand, 8783769 - 8783481
Alignment:
| Q |
3 |
atataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactt |
102 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||||| |||| |
|
|
| T |
8783769 |
atataatggtagctggaatcatcacctttattgctaggaagtttggggtgagtgtgaatcaatggatcaaggggatagaggggaactattatctagactt |
8783670 |
T |
|
| Q |
103 |
ttatact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattcta |
196 |
Q |
| |
|
|||||| |||||| | ||| ||| |||||||| |||||||||||||||| |||||||| ||||||| |||| || ||||| |||||||||||| |
|
|
| T |
8783669 |
atatactctcactactttgcccttccttacaacccatggccctactcacaattacaaatatgaaaggagaattattacagataattttttgattattctc |
8783570 |
T |
|
| Q |
197 |
cctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatga |
285 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||| |
|
|
| T |
8783569 |
cctaattcggacataactaatccggaggtggtggaaaatttgctttatgttggtactaacccacatgtacaagatcatggtggtgatga |
8783481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 14223332 - 14223144
Alignment:
| Q |
1 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaac |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
14223332 |
taatataatggtaggtggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggaaagaggagaactattatctaaac |
14223233 |
T |
|
| Q |
101 |
ttttat------actactttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattg |
183 |
Q |
| |
|
|| ||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14223232 |
ttatatactctcactactttgtcattccttaaagcccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattg |
14223144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 140 - 282
Target Start/End: Complemental strand, 4462244 - 4462102
Alignment:
| Q |
140 |
actcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaatttgc |
239 |
Q |
| |
|
||||||||| |||||||||| | || ||||||||||||| ||||||||||||||||||||||| | ||| ||||| ||| |||||||||||||||||| |
|
|
| T |
4462244 |
actcacaatgaccaatatgattagaaaatcattagagctcattgtttgattattctacctaatccgttcataactaacccgaaggtggtggaaaatttgc |
4462145 |
T |
|
| Q |
240 |
tttatgttggtactaacccacaggtacaagatgatggtgatga |
282 |
Q |
| |
|
||||| ||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
4462144 |
tttatattggtactaacccactggtacatgatgatggtgatga |
4462102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 130 - 284
Target Start/End: Original strand, 23513736 - 23513890
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
||||| |||| |||||||||||| |||||| |||||| ||| || ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
23513736 |
ccatggcccttctcacaattacctatatgagtggagagtcaataatgctaattacttgattattctacctaattcggacattactaatccggaggtggta |
23513835 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| || |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
23513836 |
gaaaactttgtttatgttggcactaacccacaggtacacaatgatggtgatgatg |
23513890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 134 - 282
Target Start/End: Original strand, 5395811 - 5395959
Alignment:
| Q |
134 |
gaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaa |
233 |
Q |
| |
|
|||||| || ||||||||||| |||| ||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
5395811 |
gacccttctaacaattaccaaaatgagtggagcgtcaataatgctaatttcttgattattctacctaattcagatattactaatccggaggtggtagaaa |
5395910 |
T |
|
| Q |
234 |
atttgctttatgttggtactaacccacaggtacaagatgatggtgatga |
282 |
Q |
| |
|
| ||| |||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
5395911 |
acttggtttatgttggcactaacccacaggtacacaatgatggtgatga |
5395959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 122 - 284
Target Start/End: Complemental strand, 10439893 - 10439731
Alignment:
| Q |
122 |
attaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccgg |
221 |
Q |
| |
|
|||| ||||||| |||| ||||||||||||||||||| |||||| ||| || | ||||| ||||||||||||||||||||||| |||||||| | | |
|
|
| T |
10439893 |
attagaacccatagcccttctcacaattaccaatatgagtggagagtcaataatgataatttcttgattattctacctaattcagatattactaagctga |
10439794 |
T |
|
| Q |
222 |
aggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||||| ||||| ||| |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
10439793 |
aggtggtagaaaacttggtttatgttggcactaacccacaggtacacaatgatggtgatgatg |
10439731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 284
Target Start/End: Original strand, 12565670 - 12565824
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
||||| |||| || |||||||||||||||| |||||| ||| || ||||||| ||||||||| |||||||||||| ||||||||| |||||||||| |
|
|
| T |
12565670 |
ccatggcccttctaacaattaccaatatgagtggagagtcaataatgctaatttcttgattatttaacctaattcagatattactaattcggaggtggta |
12565769 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| ||| ||||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
12565770 |
gaaaacttggtttatgttggtactaacccaccggtacacaatgatggtgatgatg |
12565824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 284
Target Start/End: Original strand, 13741088 - 13741242
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
||||| |||| ||||||||||||||||||| |||||| ||| || | |||||| |||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
13741088 |
ccatggcccttctcacaattaccaatatgagtggagagtcaataatgataattgcttgattattctacctaattcggacattactaattcggaggtggta |
13741187 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| | |||||||||| ||||| ||||||||||| ||||||||||||||| |
|
|
| T |
13741188 |
gaaaactatgtttatgttggcactaatccacaggtacacaatgatggtgatgatg |
13741242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 14223146 - 14223105
Alignment:
| Q |
246 |
ttggtactaacccacaggtacaagatgatggtgatgatgatg |
287 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14223146 |
ttggtactaacccacaggtacaagatgatggtgatgatgatg |
14223105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 252; Significance: 1e-140; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 22063187 - 22062904
Alignment:
| Q |
1 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22063187 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtatgaatcaagggatcaagaggatagatgagaactattatctaaac |
22063088 |
T |
|
| Q |
101 |
ttttatactactttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctaccta |
200 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22063087 |
ttttatactactttgtcattccttaaaaaccatgactctactcacaattaccaacatgcatggagaatcattagagctaattgtttgattattctaccta |
22062988 |
T |
|
| Q |
201 |
attcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
22062987 |
attcggacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaaaatgatggtgatgatg |
22062904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 285
Target Start/End: Complemental strand, 19587239 - 19586966
Alignment:
| Q |
3 |
atataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactt |
102 |
Q |
| |
|
||||| |||||| |||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
19587239 |
atatagtggtaggtggaatcatcacctttattgctaggaagtttggggtgagtctgaatcaagggatcaagaggatagagaggaactattatctacactt |
19587140 |
T |
|
| Q |
103 |
ttat------actactttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattcta |
196 |
Q |
| |
|
||| ||||||||||| ||| ||| |||||||| |||||| |||||||||||||| || ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
19587139 |
atatactctcactactttgtccttccttagaacccatggacctacttacaattaccaatataaacggagaattattagagctaattgtttgattattcta |
19587040 |
T |
|
| Q |
197 |
cctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatga |
285 |
Q |
| |
|
| |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | |||||| |
|
|
| T |
19587039 |
c---------------ctaatctggaggtggtggaaaatttgatttatgttggtattaacccacaggtacaagatgatgggggtgatga |
19586966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 130 - 284
Target Start/End: Complemental strand, 18189116 - 18188962
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||| ||| || |||||||| |||||||||||||||||||| || | |||||||||||||||||| |
|
|
| T |
18189116 |
ccatgacccttctcacaattaccaatatgagtggagagtcaataatgctaattgcttgattattctacctaattcggataatactaatccggaggtggta |
18189017 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| ||| |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
18189016 |
gaaaacttggtttatgttggcactaacccacaggtacacaatgatggtgatgatg |
18188962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 3 - 284
Target Start/End: Complemental strand, 23519431 - 23519144
Alignment:
| Q |
3 |
atataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactt |
102 |
Q |
| |
|
||||| |||||| |||||||||||| || ||||||| ||||||| | |||| | ||| | ||| |||| ||||| || | ||||||||||||| |||| |
|
|
| T |
23519431 |
atatagtggtaggtggaatcatcaccttcattgctaggaagtttagagtgaatatgagcaagggggtcaataggattgaggggaactattatctagactt |
23519332 |
T |
|
| Q |
103 |
ttatac------tactttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattcta |
196 |
Q |
| |
|
|||| ||| |||| ||| ||| ||||||||||||| ||||||| |||||||||| ||| | | | ||| ||||||||||||||||||||| |
|
|
| T |
23519331 |
agataccctcaataccatgtctttccttataacccatgacccttctcacaactaccaatatgtgcggaaagtaaatagggctaattgtttgattattcta |
23519232 |
T |
|
| Q |
197 |
cctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||| ||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||| |
|
|
| T |
23519231 |
ccttatttggacataactaatccggagatggtggaaaatttgctttatgttggaactaacccacgggtacatgatgatggtgatgatg |
23519144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 141 - 284
Target Start/End: Original strand, 17818194 - 17818337
Alignment:
| Q |
141 |
ctcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaatttgct |
240 |
Q |
| |
|
||||||||||||||||||| |||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| | |
|
|
| T |
17818194 |
ctcacaattaccaatatgagtggagagtcaataatgctaatttcttgattattctacctaattcagatattactaatccgtaggtggtagaaaacttggt |
17818293 |
T |
|
| Q |
241 |
ttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
17818294 |
ttatgttggcactaacccacaggtacacaatgatggtgatgatg |
17818337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 284
Target Start/End: Original strand, 18852688 - 18852838
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
||||| |||| ||||||||||||||||||| |||||| | | || | || || || ||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
18852688 |
ccatggcccttctcacaattaccaatatgagtggagagtaaataatgttatttctt-gattattctacctaattcagatattactaatccggagatggta |
18852786 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||| |||||||| |||||| |
|
|
| T |
18852787 |
gaaaatt---tttatgttggcactaacccacaggtacaaaatgatggtaatgatg |
18852838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 29685293 - 29685340
Alignment:
| Q |
223 |
ggtggtggaaaatttgctttatgttggtactaacccacaggtacaaga |
270 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
29685293 |
ggtggtggaaaatttgctttatgttagtactaacccacaggtacaaga |
29685340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 29685080 - 29685112
Alignment:
| Q |
16 |
tggaatcatcacttttattgctaagaagtttgg |
48 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
29685080 |
tggaatcatcacttttattgctaagaagtttgg |
29685112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 24390326 - 24390266
Alignment:
| Q |
226 |
ggtggaaaatttgctttatgttggtactaacccacaggtac---aagatgatggtgatgat |
283 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
24390326 |
ggtggaaaatttgctttatgctggtactaacaaacaggtacaggaagatcatggtgatgat |
24390266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 18977624 - 18977668
Alignment:
| Q |
226 |
ggtggaaaatttgctttatgttggtactaacccacaggtacaaga |
270 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||| |||||||| |
|
|
| T |
18977624 |
ggtggaaaatttgctttatgctggtactaacaaacatgtacaaga |
18977668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 248; Significance: 1e-138; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 6813400 - 6813683
Alignment:
| Q |
1 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6813400 |
taatataatggtagatggaatcatcacttttattgctaagaagtttgaggtgagtatgaatcaagggatcaagaggatagatgagaactattatctaaac |
6813499 |
T |
|
| Q |
101 |
ttttatactactttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctaccta |
200 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6813500 |
ttttatactactttgtcattccttaaaaaccatgactctactcacaattaccaatatgcatggagaatcattagagctaattgtttgattattctaccta |
6813599 |
T |
|
| Q |
201 |
attcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
6813600 |
attcggacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaaaatgatggtaatgatg |
6813683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 287
Target Start/End: Complemental strand, 12778184 - 12777894
Alignment:
| Q |
3 |
atataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactt |
102 |
Q |
| |
|
|||||||||||| || |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| || || ||||||| |||||| |
|
|
| T |
12778184 |
atataatggtaggtgacatcatcccttttattgctaagaggtttagggtgagtgtgaatcaagggatcaagaggatagaggaaaattattatccaaactt |
12778085 |
T |
|
| Q |
103 |
ttatact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattcta |
196 |
Q |
| |
|
| |||| |||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
12778084 |
atttactctcactactttgtccttccttagaacccatgaccctactcacaattatcaatatgaatggagaattattagaactaattgtttgattattcta |
12777985 |
T |
|
| Q |
197 |
cctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
287 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12777984 |
cctaattcggacattactaattcggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
12777894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 9 - 285
Target Start/End: Original strand, 15024243 - 15024525
Alignment:
| Q |
9 |
tggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaacttttatac |
108 |
Q |
| |
|
|||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | | ||||||||||| |||| ||||| |
|
|
| T |
15024243 |
tggtaggtagaatcatcacttttattgctagaaagtttggggtgagtgtgaatcaagggatcaagaggatagaggggtactattatctatacttatatac |
15024342 |
T |
|
| Q |
109 |
t------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaat |
202 |
Q |
| |
|
| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |
|
|
| T |
15024343 |
tctcactactttgtccttccttagaacccatgaccctactcacaattaccaatatgaatggagaattaatagagctaattgttttattattctacctaat |
15024442 |
T |
|
| Q |
203 |
tcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatga |
285 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||| | |||||| |
|
|
| T |
15024443 |
ccagacataactaatccggaggtggtggaaaatttgcattatgttggtactaatccacatgtacaagatgatggaggtgatga |
15024525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 131 - 282
Target Start/End: Original strand, 20562017 - 20562168
Alignment:
| Q |
131 |
catgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtgg |
230 |
Q |
| |
|
|||| |||| ||||||||||||||||||| |||||| ||| || |||||| ||||||||||||||||||||||| ||||||||| |||||||||| | |
|
|
| T |
20562017 |
catggcccttctcacaattaccaatatgagtggagagtcaatactactaatttcttgattattctacctaattcagatattactaattcggaggtggtag |
20562116 |
T |
|
| Q |
231 |
aaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatga |
282 |
Q |
| |
|
|||| | | ||| |||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
20562117 |
aaaactaggtttgtgttggcactaacccacaggtacacaatgatggtgatga |
20562168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 131 - 282
Target Start/End: Original strand, 20564325 - 20564476
Alignment:
| Q |
131 |
catgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtgg |
230 |
Q |
| |
|
|||| |||| ||||||||||||||||||| |||||| ||| || |||||| ||||||||||||||||||||||| ||||||||| |||||||||| | |
|
|
| T |
20564325 |
catggcccttctcacaattaccaatatgagtggagagtcaatactactaatttcttgattattctacctaattcagatattactaattcggaggtggtag |
20564424 |
T |
|
| Q |
231 |
aaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatga |
282 |
Q |
| |
|
|||| | | ||| |||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
20564425 |
aaaactaggtttgtgttggcactaacccacaggtacacaatgatggtgatga |
20564476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 130 - 284
Target Start/End: Complemental strand, 13090351 - 13090200
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
||||| |||| ||||||||| ||||||||| ||| || ||| || ||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
13090351 |
ccatggcccttctcacaattcccaatatgagtggtgagtcaataatgctaatttcttgattattctacctaattcagatattactaatccgaaggtggta |
13090252 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| | |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
13090251 |
gaaaact---tttatgttggcactaacccacaggtacacaatgatggtgatgatg |
13090200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 282
Target Start/End: Original strand, 20559709 - 20559860
Alignment:
| Q |
131 |
catgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtgg |
230 |
Q |
| |
|
|||| |||| ||||||||||||||||||| |||||| ||| || |||||| ||||||||||||||||||||||| ||||||||| |||||||||| | |
|
|
| T |
20559709 |
catggcccttctcacaattaccaatatgagtggagagtcaatactactaatttcttgattattctacctaattcagatattactaattcggaggtggtag |
20559808 |
T |
|
| Q |
231 |
aaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatga |
282 |
Q |
| |
|
|||| | | ||| |||||| |||||||||||| |||| ||||||||||||| |
|
|
| T |
20559809 |
aaaactaggtttgtgttggcactaacccacagatacacaatgatggtgatga |
20559860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 284
Target Start/End: Complemental strand, 9362501 - 9362350
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
||||| |||| |||||||| ||||||||| |||||| ||| || ||||||| ||||||||||||||||||||| | |||||||||||| ||||||| |
|
|
| T |
9362501 |
ccatggcccttctcacaatccccaatatgagtggagagtcaataatgctaatttcttgattattctacctaattcaaatattactaatccgaaggtggta |
9362402 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| | |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
9362401 |
gaaaact---tttatgttggcactaacccacaggtacacaatgatggtgatgatg |
9362350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 284
Target Start/End: Original strand, 13096380 - 13096531
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
||||| |||| ||||||||| |||| |||| |||||| ||| || |||||| ||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
13096380 |
ccatggcccttctcacaattcccaacatgagtggagagtcaataattctaatttcttgattattctacctaattcagatattactaatccgaaggtggta |
13096479 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| | ||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
13096480 |
gaaaact---tttatgttgacactaacccacaggtacacaatgatggtgatgatg |
13096531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 222 - 284
Target Start/End: Complemental strand, 3246968 - 3246906
Alignment:
| Q |
222 |
aggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
3246968 |
aggtggtggaaaatttgttttatttttgtactaacccacaggtacaagatgatggtgatgatg |
3246906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 284
Target Start/End: Original strand, 20153465 - 20153598
Alignment:
| Q |
148 |
ttaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaatttgctttatgtt |
247 |
Q |
| |
|
|||||||||||| |||||| ||| | ||||||| ||||||||||||||| ||||| ||| |||||| ||||||||| ||||| || |||||||| |
|
|
| T |
20153465 |
ttaccaatatgagtggagagtcaatgctgctaatttcttgattattctacct---tcagatattcctaatctggaggtggtagaaaactttgtttatgtt |
20153561 |
T |
|
| Q |
248 |
ggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|| ||||||| ||||||||| ||||||||||||||| |
|
|
| T |
20153562 |
ggcactaacctacaggtacacaatgatggtgatgatg |
20153598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 29293 - 29585
Alignment:
| Q |
1 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29293 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtatgaatcaagggatcaagaggatagatgagaactattatctaaac |
29392 |
T |
|
| Q |
101 |
ttttatact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattc |
194 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
29393 |
ttttatactctcactactttgtcattccttaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtatgattattc |
29492 |
T |
|
| Q |
195 |
tacctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
287 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
29493 |
tacctaattcggacattactaatccggaggtggtagaaaatttgctttatgttggtactaacccacaggtacaagatgatggtaatgatgatg |
29585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 20000833 - 20001122
Alignment:
| Q |
1 |
taatataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20000833 |
taatataatggtagatggaatcatcacttttattgctaag---tttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaac |
20000929 |
T |
|
| Q |
101 |
ttttatact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattc |
194 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20000930 |
ttttatactctcactactttgtcattccttaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattc |
20001029 |
T |
|
| Q |
195 |
tacctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
287 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20001030 |
tacctaattcggacattactaatctggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
20001122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 131 - 284
Target Start/End: Complemental strand, 20040615 - 20040462
Alignment:
| Q |
131 |
catgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtgg |
230 |
Q |
| |
|
|||| |||| ||||||||||||||||||| |||||| ||| || |||||| ||||||||||||||||||||||| ||||||||||| |||||||| | |
|
|
| T |
20040615 |
catggcccttctcacaattaccaatatgagtggagagtcaatactactaatttcttgattattctacctaattcagatattactaatccagaggtggtag |
20040516 |
T |
|
| Q |
231 |
aaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||| | | |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
20040515 |
aaaactaggtttatgttggcactaacccacaggtacacaatgatggtgatgatg |
20040462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 122 - 284
Target Start/End: Complemental strand, 21855328 - 21855169
Alignment:
| Q |
122 |
attaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccgg |
221 |
Q |
| |
|
|||| ||||||| ||||| ||||||||||||||||||| |||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
21855328 |
attagaacccataacccttctcacaattaccaatatgagtggagagtcaataatgctaatttcttgattattctacctaattcagatattactaatccga |
21855229 |
T |
|
| Q |
222 |
aggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||||| ||||| | |||||||||| ||||||| ||||||||| ||||||||||||||| |
|
|
| T |
21855228 |
aggtggtagaaaact---tttatgttggcactaacctacaggtacacaatgatggtgatgatg |
21855169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 131 - 284
Target Start/End: Original strand, 17619412 - 17619562
Alignment:
| Q |
131 |
catgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtgg |
230 |
Q |
| |
|
|||| |||| ||||||||| ||||||||| |||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||||| ||||||| | |
|
|
| T |
17619412 |
catggcccttctcacaatttccaatatgagtggagagtcaataatgctaatttcttgattattctacctaattcagatattactaatccgaaggtggtag |
17619511 |
T |
|
| Q |
231 |
aaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||| | |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
17619512 |
aaaact---tttatgttggcactaacccacaggtacacaatgatggtgatgatg |
17619562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 3 - 287
Target Start/End: Complemental strand, 52233 - 51943
Alignment:
| Q |
3 |
atataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactt |
102 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
52233 |
atataatggtaggtggaatcatcacttttattgctaagaggtttagggtgagtgtgaatcaagggatcaagaggatagaggaaaactattatctaaactt |
52134 |
T |
|
| Q |
103 |
ttatact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattcta |
196 |
Q |
| |
|
|||||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
52133 |
atatactcttactactttgtccttccttataacccatgaccctactcacaattaccaatatgaatggagaattattagagctaattgtttgactattcta |
52034 |
T |
|
| Q |
197 |
cctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
287 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52033 |
cctaattcggacattactattccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
51943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 3 - 287
Target Start/End: Complemental strand, 23712387 - 23712097
Alignment:
| Q |
3 |
atataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactt |
102 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||| || ||||||| |||||| |
|
|
| T |
23712387 |
atataatggtaggtggaatcatcacttttgttgctaagaggtttagggtgagtgtgaatcaagggatcaagaggatagatgaaaattattatccaaactt |
23712288 |
T |
|
| Q |
103 |
ttatact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattcta |
196 |
Q |
| |
|
|||||| |||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||| || |||||| |||||| ||||||||||||| |
|
|
| T |
23712287 |
atatactctcactactttgtctttccttagaacccatgaccatactcacaattaccaatatgaatggaggattattagaactaattttttgattattcta |
23712188 |
T |
|
| Q |
197 |
cctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatgatg |
287 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23712187 |
cctaattcggacattactaatccggaggtggtggaaaatttgctttatgttggtcctaacccacaggtacaagatgatggtgatgatgatg |
23712097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 136 - 284
Target Start/End: Complemental strand, 20446386 - 20446238
Alignment:
| Q |
136 |
ccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaat |
235 |
Q |
| |
|
|||| ||||||||||||||||||| |||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||| |
|
|
| T |
20446386 |
cccttctcacaattaccaatatgagtggagagtcaataatgctaatttcttgattattctacctaattcagatattactaatccgaaggtggtagaaaac |
20446287 |
T |
|
| Q |
236 |
ttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||| |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
20446286 |
ttggtttatgttggcactaacccacaggtacacaatgatggtgatgatg |
20446238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 144 - 284
Target Start/End: Complemental strand, 18487596 - 18487456
Alignment:
| Q |
144 |
acaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaatttgcttta |
243 |
Q |
| |
|
|||||||||||||||| |||||| ||| || ||||||| ||||||||||||||||||||||| |||| |||||| |||||||| ||||| ||| |||| |
|
|
| T |
18487596 |
acaattaccaatatgagtggagagtcaataatgctaatttcttgattattctacctaattcagatattattaatcctgaggtggtagaaaacttggttta |
18487497 |
T |
|
| Q |
244 |
tgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
18487496 |
tgttggcactaacccacaggtacacaatgatggtgatgatg |
18487456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 130 - 284
Target Start/End: Complemental strand, 21282458 - 21282303
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaa-ttgtttgattattctacctaattcagacattactaatccggaggtggt |
228 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| |||||| ||| || ||||| ||| |||||||||||||| ||||| | |||||||||||||||||||| |
|
|
| T |
21282458 |
ccataacccttctcacaattaccaatatgagtggagagtcaataacgctaaattgcttgattattctaccaaattcgaatattactaatccggaggtggt |
21282359 |
T |
|
| Q |
229 |
ggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| ||| |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
21282358 |
agaaaacttggtttatgttggcactaacccacaggtacacaatgatggtgatgatg |
21282303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 284
Target Start/End: Complemental strand, 23602173 - 23602033
Alignment:
| Q |
141 |
ctcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaatttgct |
240 |
Q |
| |
|
||||||||| ||||||||| ||| || ||| || ||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||| | | |
|
|
| T |
23602173 |
ctcacaattcccaatatgagtggcgagtcaataatgctaatttcttgattattctacctaattcagatattactaatccgaaggtggtagaaaact---t |
23602077 |
T |
|
| Q |
241 |
ttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
23602076 |
ttatgttggcactaacccacaggtacacaatgatggtgatgatg |
23602033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 284
Target Start/End: Original strand, 24939200 - 24939351
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
||||| |||| ||||||||| ||||||||| ||| || ||| || ||||||| ||||||||||||||||||||||| ||||||||| || ||||||| |
|
|
| T |
24939200 |
ccatggcccttctcacaattcccaatatgagtggcgagtcaataatgctaatttcttgattattctacctaattcagatattactaattcgaaggtggta |
24939299 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| | |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
24939300 |
gaaaact---tttatgttggcactaacccacaggtacacaatgatggtgatgatg |
24939351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 284
Target Start/End: Original strand, 24218516 - 24218650
Alignment:
| Q |
147 |
attaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaatttgctttatgt |
246 |
Q |
| |
|
||||||||||||| |||||| ||| || ||||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||| | |||||| |
|
|
| T |
24218516 |
attaccaatatgagtggagagtcaataatgctaatttcttgattattctacctaattcagatattactaatccggagatggtagaaaact---attatgt |
24218612 |
T |
|
| Q |
247 |
tggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||| ||||||||||| ||||| |||||||| |||||| |
|
|
| T |
24218613 |
tggcactaacccacatgtacacaatgatggtaatgatg |
24218650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 18487748 - 18487716
Alignment:
| Q |
3 |
atataatggtagatggaatcatcacttttattg |
35 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |
|
|
| T |
18487748 |
atataatggtagatggaatcatcactttcattg |
18487716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0485 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: scaffold0485
Description:
Target: scaffold0485; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 6 - 285
Target Start/End: Complemental strand, 11582 - 11296
Alignment:
| Q |
6 |
taatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactttta |
105 |
Q |
| |
|
||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| || |
|
|
| T |
11582 |
taatggtaggtggaatcatcacctttattgctagaaagtttggggtgagtgtgaatcaagggatcaagaggatagaggggaactattatctagacttata |
11483 |
T |
|
| Q |
106 |
ta------ctactttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacct |
199 |
Q |
| |
|
|| |||||||||| ||| ||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
11482 |
taatctcactactttgtccttccttagaacccatgaccatactcacaattaccaatatgagtggagaattattagagctaattgtttgattattctacct |
11383 |
T |
|
| Q |
200 |
aattcagacattactaatccggaggtggtgg-aaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatga |
285 |
Q |
| |
|
||| | ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
11382 |
aatccggacataactaatctggaggtggtggaaaaatttgctttatgttggtactaacccacaggtacaaggtgatggtggtgatga |
11296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 86; Significance: 4e-41; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 285
Target Start/End: Complemental strand, 25339786 - 25339498
Alignment:
| Q |
3 |
atataatggtagatggaatcatcacttttattgctaagaagtttggggtgagtgtgaatcaagggatcaagaggatagatgagaactattatctaaactt |
102 |
Q |
| |
|
|||| ||||||| ||| |||||||| || ||||||| ||||||||| || ||||||| | |||||||||| |||||||| | |||| || | || |||| |
|
|
| T |
25339786 |
atatgatggtaggtggtatcatcaccttcattgctaggaagtttggagtaagtgtgagtaaagggatcaataggatagaggggaacaatagtttagactt |
25339687 |
T |
|
| Q |
103 |
ttatact------actttgtcattcattaaaacccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattcta |
196 |
Q |
| |
|
|||| ||| |||| || ||| ||| |||| ||| |||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||| |
|
|
| T |
25339686 |
agataccctcaccactatgtcctttcttagaactcatggcccaactcacaattaccaatatgagtggaaggtcaatagggctaattgtttgattattcta |
25339587 |
T |
|
| Q |
197 |
cctaattcagacattactaatccggaggtggtggaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatga |
285 |
Q |
| |
|
|||||| | ||||| ||||||| |||||||||||||||||| ||||||||||| |||||| |||| ||||| |||||||||| |||||| |
|
|
| T |
25339586 |
cctaatccggacataactaatctggaggtggtggaaaattttctttatgttggcactaactcacatgtacatgatgatggtggtgatga |
25339498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 130 - 267
Target Start/End: Original strand, 24500997 - 24501134
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
||||| |||| ||||||||||||||||| | |||||| ||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
24500997 |
ccatggcccttctcacaattaccaatattagtggagagtcaataatgctaattgcttgattattctacctaattcggacattactaatccggaggtggta |
24501096 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtaca |
267 |
Q |
| |
|
||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
24501097 |
gaaaacttgatttatgttggcactaacccacaggtaca |
24501134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25361892 - 25361932
Alignment:
| Q |
1 |
taatataatggtagatggaatcatcacttttattgctaaga |
41 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
25361892 |
taatataatggttggtggaatcatcacttttattgctaaga |
25361932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0566 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0566
Description:
Target: scaffold0566; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 131 - 284
Target Start/End: Original strand, 1275 - 1428
Alignment:
| Q |
131 |
catgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtgg |
230 |
Q |
| |
|
||||||||| || |||||||||||||||| |||||| ||| | ||||||| ||||||||||||||||||||||| |||||||||| ||||||||| | |
|
|
| T |
1275 |
catgacccttctaacaattaccaatatgagtggagagtcaattatgctaatttcttgattattctacctaattcagatattactaatctggaggtggtag |
1374 |
T |
|
| Q |
231 |
aaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||| ||| |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
1375 |
aaaacttggtttatgttggcactaacccacaggtacacaatgatggtgatgatg |
1428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0222 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0222
Description:
Target: scaffold0222; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 18509 - 18632
Alignment:
| Q |
144 |
acaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaatttgcttta |
243 |
Q |
| |
|
|||||||||||||||| |||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| |||| |
|
|
| T |
18509 |
acaattaccaatatgagtggagagtcaataatgctaatttcttgattattctacctaattcagatattactaatccggaggtggtagaaaacttggttta |
18608 |
T |
|
| Q |
244 |
tgttggtactaacccacaggtaca |
267 |
Q |
| |
|
|||||| ||||||||||||||||| |
|
|
| T |
18609 |
tgttggcactaacccacaggtaca |
18632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0220 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0220
Description:
Target: scaffold0220; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 249
Target Start/End: Complemental strand, 11860 - 11741
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||| ||| || |||||||| |||||||||||||||||||| || |||||||||| ||||||||| |
|
|
| T |
11860 |
ccatgacccttctcacaattaccaatatgagtggagagtcaataatgctaattgcttgattattctacctaattcggatattactaatctggaggtggta |
11761 |
T |
|
| Q |
230 |
gaaaatttgctttatgttgg |
249 |
Q |
| |
|
||||| ||| |||||||||| |
|
|
| T |
11760 |
gaaaacttggtttatgttgg |
11741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0113 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0113
Description:
Target: scaffold0113; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 284
Target Start/End: Complemental strand, 38177 - 38026
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
||||| |||| ||||||||| ||||||||| ||| || ||| || ||||||| ||||||||||||||||||||||| ||||||||| | ||||||| |
|
|
| T |
38177 |
ccatggcccttctcacaatttccaatatgagtggcgagtcaataatgctaatttcttgattattctacctaattcagatattactaattctaaggtggta |
38078 |
T |
|
| Q |
230 |
gaaaatttgctttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||| | |||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
38077 |
gaaaact---tttatgttggcactaacccacaggtacacaatgatggtgatgatg |
38026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 17034 - 17138
Alignment:
| Q |
130 |
ccatgaccctactcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtg |
229 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||| ||| || |||||||| |||||||||||||||||||| || ||||||||| | |||||||| |
|
|
| T |
17034 |
ccatgacccttctcacaattaccaatatgagtggagagtcaataatgctaattgcttgattattctacctaattcggatattactaatacagaggtggta |
17133 |
T |
|
| Q |
230 |
gaaaa |
234 |
Q |
| |
|
||||| |
|
|
| T |
17134 |
gaaaa |
17138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 284
Target Start/End: Complemental strand, 12977 - 12837
Alignment:
| Q |
141 |
ctcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaatttgct |
240 |
Q |
| |
|
|||||| |||||||||||| | |||| ||| || ||||||| | |||||||||||||| | ||| |||||||||| ||||||||| ||||| || |
|
|
| T |
12977 |
ctcacagttaccaatatgagtagagagtcaataatgctaatttccttattattctacctaaattagatattactaatctggaggtggtagaaaactt--- |
12881 |
T |
|
| Q |
241 |
ttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
12880 |
ttatgttggcactaacccacaggtacataatgatggtgatgatg |
12837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 284
Target Start/End: Complemental strand, 8868 - 8728
Alignment:
| Q |
141 |
ctcacaattaccaatatgaatggagaatcattagagctaattgtttgattattctacctaattcagacattactaatccggaggtggtggaaaatttgct |
240 |
Q |
| |
|
|||||| |||||||||||| | |||| ||| || ||||||| | |||||||||||||| | ||| |||||||||| ||||||||| ||||| || |
|
|
| T |
8868 |
ctcacagttaccaatatgagtagagagtcaataatgctaatttccttattattctacctaaattagatattactaatctggaggtggtagaaaactt--- |
8772 |
T |
|
| Q |
241 |
ttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
||||||||| ||||||||||| ||||| ||||||||||||||| |
|
|
| T |
8771 |
ttatgttggcactaacccacatgtacacaatgatggtgatgatg |
8728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 8709 - 8665
Alignment:
| Q |
240 |
tttatgttggtactaacccacaggtacaagatgatggtgatgatg |
284 |
Q |
| |
|
|||||||||| |||||||||||| |||| ||||||||||||||| |
|
|
| T |
8709 |
tttatgttggcactaacccacagatacacaatgatggtgatgatg |
8665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1184
Description:
Target: scaffold1184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 260
Target Start/End: Complemental strand, 571 - 537
Alignment:
| Q |
226 |
ggtggaaaatttgctttatgttggtactaacccac |
260 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
571 |
ggtggaaaatttgctttatgttggtactaacccac |
537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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