View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19635_high_10 (Length: 306)

Name: NF19635_high_10
Description: NF19635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19635_high_10
NF19635_high_10
[»] chr3 (32 HSPs)
chr3 (16-126)||(40552332-40552442)
chr3 (1-126)||(20373354-20373479)
chr3 (1-126)||(48354934-48355059)
chr3 (1-85)||(3655260-3655344)
chr3 (1-126)||(26941318-26941443)
chr3 (1-126)||(51213039-51213164)
chr3 (18-126)||(47481515-47481623)
chr3 (1-82)||(42506133-42506214)
chr3 (16-126)||(46297835-46297945)
chr3 (1-126)||(37203060-37203185)
chr3 (18-126)||(35844319-35844427)
chr3 (1-90)||(4761707-4761796)
chr3 (1-126)||(4015453-4015578)
chr3 (16-76)||(21009875-21009935)
chr3 (16-118)||(29099356-29099458)
chr3 (14-131)||(54828772-54828888)
chr3 (16-83)||(34132971-34133038)
chr3 (1-132)||(21193593-21193724)
chr3 (16-126)||(37157701-37157810)
chr3 (44-85)||(54505842-54505883)
chr3 (35-131)||(22450956-22451052)
chr3 (16-90)||(22446138-22446211)
chr3 (43-85)||(41585407-41585449)
chr3 (1-90)||(3362282-3362371)
chr3 (16-126)||(44186574-44186684)
chr3 (44-126)||(33698185-33698263)
chr3 (16-113)||(11357437-11357535)
chr3 (1-115)||(40935995-40936109)
chr3 (44-126)||(52041024-52041106)
chr3 (98-126)||(11835761-11835789)
chr3 (98-126)||(40640652-40640680)
chr3 (98-126)||(43348282-43348310)
[»] chr8 (29 HSPs)
chr8 (16-122)||(37970598-37970704)
chr8 (1-126)||(10555266-10555391)
chr8 (16-126)||(43643674-43643784)
chr8 (16-126)||(1150184-1150294)
chr8 (1-126)||(23854495-23854620)
chr8 (1-126)||(1204928-1205053)
chr8 (16-131)||(36695045-36695160)
chr8 (16-126)||(13307624-13307734)
chr8 (16-126)||(30654662-30654772)
chr8 (16-90)||(8803889-8803963)
chr8 (16-126)||(6098597-6098707)
chr8 (18-126)||(16446956-16447064)
chr8 (16-126)||(31933965-31934075)
chr8 (1-85)||(12876151-12876235)
chr8 (1-126)||(16222864-16222989)
chr8 (1-126)||(27082902-27083027)
chr8 (16-83)||(9864192-9864259)
chr8 (17-67)||(1149712-1149762)
chr8 (1-90)||(40862456-40862545)
chr8 (16-126)||(34894968-34895078)
chr8 (36-126)||(38643979-38644069)
chr8 (16-129)||(465840-465953)
chr8 (17-128)||(7891037-7891139)
chr8 (16-85)||(34952110-34952179)
chr8 (63-126)||(15009243-15009306)
chr8 (98-126)||(5300107-5300135)
chr8 (98-126)||(7998364-7998392)
chr8 (98-126)||(35459859-35459887)
chr8 (98-126)||(39099270-39099298)
[»] chr7 (34 HSPs)
chr7 (16-126)||(37109849-37109959)
chr7 (20-131)||(17842664-17842775)
chr7 (1-131)||(18797301-18797429)
chr7 (3-126)||(27283721-27283844)
chr7 (1-126)||(7334771-7334896)
chr7 (1-126)||(38258522-38258647)
chr7 (16-126)||(32821127-32821237)
chr7 (16-126)||(24211718-24211828)
chr7 (1-126)||(30055503-30055629)
chr7 (16-128)||(27421453-27421565)
chr7 (16-126)||(5657555-5657665)
chr7 (1-126)||(37346999-37347124)
chr7 (38-126)||(31579165-31579253)
chr7 (8-90)||(38053499-38053581)
chr7 (16-130)||(23111163-23111277)
chr7 (18-126)||(12390706-12390814)
chr7 (16-126)||(4582896-4583006)
chr7 (8-126)||(9355892-9356010)
chr7 (16-126)||(21991613-21991723)
chr7 (16-126)||(43686018-43686127)
chr7 (18-126)||(8861262-8861370)
chr7 (16-85)||(10481622-10481692)
chr7 (16-90)||(26980336-26980410)
chr7 (1-131)||(26524386-26524516)
chr7 (16-126)||(48928637-48928747)
chr7 (17-85)||(44413454-44413522)
chr7 (1-76)||(11071233-11071308)
chr7 (16-70)||(32432485-32432539)
chr7 (1-70)||(29173573-29173642)
chr7 (16-126)||(31520797-31520907)
chr7 (1-85)||(34362208-34362291)
chr7 (36-85)||(22687257-22687306)
chr7 (16-85)||(33688336-33688405)
chr7 (18-90)||(12165765-12165837)
[»] chr5 (44 HSPs)
chr5 (8-126)||(22974137-22974255)
chr5 (8-90)||(22255219-22255302)
chr5 (19-126)||(31705677-31705784)
chr5 (1-90)||(24886142-24886231)
chr5 (1-85)||(14919576-14919660)
chr5 (17-85)||(17158094-17158162)
chr5 (9-128)||(27318543-27318662)
chr5 (16-135)||(36860416-36860535)
chr5 (1-74)||(5829955-5830028)
chr5 (16-126)||(19119861-19119971)
chr5 (1-131)||(30969372-30969502)
chr5 (16-126)||(36866764-36866874)
chr5 (16-126)||(38528299-38528409)
chr5 (16-126)||(40133387-40133497)
chr5 (1-126)||(35826531-35826656)
chr5 (1-85)||(43308700-43308783)
chr5 (16-128)||(699150-699262)
chr5 (22-126)||(15724492-15724596)
chr5 (16-90)||(7208926-7209000)
chr5 (16-126)||(8741949-8742060)
chr5 (43-126)||(14409416-14409499)
chr5 (16-126)||(1429208-1429318)
chr5 (16-126)||(5112376-5112486)
chr5 (16-126)||(7693232-7693342)
chr5 (16-126)||(35511540-35511650)
chr5 (18-90)||(9200271-9200343)
chr5 (33-126)||(12910352-12910445)
chr5 (18-127)||(26268075-26268184)
chr5 (1-126)||(39572821-39572946)
chr5 (16-128)||(5837555-5837667)
chr5 (16-131)||(27330303-27330416)
chr5 (18-129)||(25500991-25501102)
chr5 (43-126)||(26317774-26317857)
chr5 (44-85)||(22255618-22255659)
chr5 (16-85)||(23116285-23116354)
chr5 (16-126)||(32563151-32563261)
chr5 (16-66)||(35504427-35504477)
chr5 (33-131)||(13956425-13956523)
chr5 (16-67)||(21088829-21088880)
chr5 (43-85)||(5748478-5748520)
chr5 (1-116)||(33908245-33908360)
chr5 (16-126)||(22980795-22980905)
chr5 (1-126)||(31786694-31786819)
chr5 (21-85)||(42342776-42342840)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-130)||(7885-8014)
[»] chr6 (16 HSPs)
chr6 (16-126)||(4318895-4319005)
chr6 (16-132)||(1945829-1945946)
chr6 (16-126)||(8513235-8513345)
chr6 (16-126)||(3880011-3880121)
chr6 (16-126)||(5627393-5627503)
chr6 (16-131)||(29182160-29182275)
chr6 (16-126)||(7055287-7055397)
chr6 (16-126)||(7235106-7235216)
chr6 (1-126)||(18498435-18498561)
chr6 (16-128)||(6088908-6089020)
chr6 (64-128)||(30353478-30353542)
chr6 (16-85)||(15491658-15491727)
chr6 (16-85)||(33893074-33893143)
chr6 (16-74)||(6091255-6091313)
chr6 (52-126)||(20768088-20768162)
chr6 (16-130)||(21017184-21017298)
[»] chr4 (42 HSPs)
chr4 (16-126)||(25184115-25184225)
chr4 (18-132)||(27396612-27396726)
chr4 (16-135)||(34361590-34361709)
chr4 (1-132)||(55477975-55478110)
chr4 (16-126)||(19440747-19440858)
chr4 (1-126)||(19089537-19089662)
chr4 (1-126)||(25701141-25701266)
chr4 (33-126)||(35021151-35021244)
chr4 (14-85)||(17167756-17167827)
chr4 (16-128)||(17173290-17173402)
chr4 (16-126)||(32912679-32912789)
chr4 (1-126)||(37663825-37663948)
chr4 (18-126)||(879649-879757)
chr4 (16-126)||(3042613-3042723)
chr4 (16-126)||(39397920-39398030)
chr4 (16-128)||(36493787-36493899)
chr4 (10-81)||(50697289-50697360)
chr4 (16-126)||(29584299-29584407)
chr4 (1-128)||(47253749-47253875)
chr4 (36-85)||(4396369-4396418)
chr4 (16-126)||(7703519-7703629)
chr4 (16-126)||(34948196-34948306)
chr4 (16-131)||(9139244-9139357)
chr4 (16-90)||(54499337-54499412)
chr4 (23-126)||(4205118-4205221)
chr4 (16-126)||(37287735-37287846)
chr4 (16-126)||(49375968-49376079)
chr4 (16-126)||(4597995-4598104)
chr4 (16-126)||(28003085-28003195)
chr4 (16-126)||(38011856-38011966)
chr4 (16-126)||(42199731-42199841)
chr4 (1-125)||(6864038-6864162)
chr4 (43-90)||(53124325-53124372)
chr4 (16-85)||(23761115-23761184)
chr4 (16-126)||(30002723-30002833)
chr4 (16-126)||(35025687-35025797)
chr4 (1-74)||(50764784-50764857)
chr4 (16-126)||(55241203-55241313)
chr4 (17-126)||(37775671-37775780)
chr4 (98-127)||(20097509-20097538)
chr4 (98-131)||(38812278-38812311)
chr4 (98-126)||(38811815-38811843)
[»] chr1 (36 HSPs)
chr1 (16-126)||(18422649-18422759)
chr1 (16-126)||(32267032-32267142)
chr1 (1-126)||(10922725-10922850)
chr1 (1-128)||(15752025-15752152)
chr1 (16-126)||(15382931-15383041)
chr1 (16-85)||(37451325-37451394)
chr1 (3-126)||(37618949-37619074)
chr1 (16-85)||(51128898-51128967)
chr1 (1-126)||(1547285-1547410)
chr1 (1-85)||(28564834-28564918)
chr1 (16-126)||(19899837-19899947)
chr1 (1-131)||(8222124-8222251)
chr1 (16-83)||(30327020-30327087)
chr1 (16-126)||(2959746-2959856)
chr1 (16-126)||(30254422-30254531)
chr1 (17-128)||(28769649-28769759)
chr1 (16-90)||(32216089-32216163)
chr1 (16-85)||(9903122-9903191)
chr1 (16-126)||(23999345-23999455)
chr1 (16-126)||(42721037-42721147)
chr1 (16-85)||(48620676-48620745)
chr1 (1-117)||(47279196-47279312)
chr1 (19-85)||(27763382-27763447)
chr1 (35-85)||(46931450-46931500)
chr1 (16-126)||(34012445-34012555)
chr1 (16-126)||(38823212-38823322)
chr1 (2-126)||(10182062-10182186)
chr1 (46-126)||(16415643-16415723)
chr1 (31-126)||(30254856-30254950)
chr1 (16-126)||(11742418-11742528)
chr1 (16-67)||(21289729-21289780)
chr1 (16-85)||(3534971-3535040)
chr1 (16-126)||(14758039-14758149)
chr1 (16-85)||(27563973-27564042)
chr1 (98-126)||(27227627-27227655)
chr1 (98-126)||(43579244-43579272)
[»] chr2 (29 HSPs)
chr2 (17-126)||(33551078-33551187)
chr2 (1-90)||(37905746-37905835)
chr2 (1-126)||(13711466-13711591)
chr2 (16-90)||(43648336-43648410)
chr2 (9-85)||(19289407-19289483)
chr2 (16-132)||(4166918-4167034)
chr2 (11-126)||(26357579-26357694)
chr2 (16-126)||(11366472-11366582)
chr2 (1-131)||(36641983-36642113)
chr2 (1-126)||(2325446-2325571)
chr2 (1-129)||(41463926-41464054)
chr2 (19-126)||(17054190-17054297)
chr2 (16-128)||(43770930-43771041)
chr2 (16-126)||(35958911-35959021)
chr2 (17-126)||(17071829-17071938)
chr2 (1-129)||(3176938-3177066)
chr2 (16-90)||(27350029-27350103)
chr2 (16-126)||(4264168-4264278)
chr2 (16-126)||(19313854-19313964)
chr2 (16-128)||(33660459-33660571)
chr2 (3-81)||(4763678-4763756)
chr2 (16-74)||(33902120-33902178)
chr2 (1-57)||(39167439-39167495)
chr2 (46-126)||(41465511-41465591)
chr2 (43-126)||(18494386-18494469)
chr2 (16-90)||(33709323-33709397)
chr2 (1-90)||(4478407-4478496)
chr2 (98-126)||(7007063-7007091)
chr2 (98-126)||(43446480-43446508)
[»] scaffold0022 (1 HSPs)
scaffold0022 (16-128)||(146089-146201)
[»] scaffold0002 (3 HSPs)
scaffold0002 (18-85)||(94458-94525)
scaffold0002 (16-74)||(408501-408559)
scaffold0002 (1-126)||(136-261)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-128)||(43957-44084)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-128)||(154703-154830)
[»] scaffold0009 (1 HSPs)
scaffold0009 (63-126)||(100823-100886)


Alignment Details
Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 40552332 - 40552442
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| | ||       ||||||||||||||||||    
T  40552332 tgaacttttgatgtcattgtacaaacggtggagtgttactcattacatttttgatgttatagtgttaacttctccaaaaaagtcattctcatgacttcac 40552431  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  40552432 catagaatttt 40552442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 20373354 - 20373479
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| | |||||| ||||       |||    
T  20373354 tgataccatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcgttacatttttgatgttatagtattaacttcaccaaaaaaatca 20373453  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    |||| |||||||||| ||| ||||||    
T  20373454 ttcttatgacttcactataaaatttt 20373479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 48355059 - 48354934
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||||| |||||||||||||  |||||||||||  |||||||||||||||||||||||| || ||||| |||||||| ||||       |||    
T  48355059 tgatactatgagaactgaacttttgatgccattgtacaaacaatggggtgttactcattacatttttaatattatagtgttaacttcaccataaaaatca 48354960  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    ||||||||||||||||||||||||||    
T  48354959 ttctcatgacttcaccatagaatttt 48354934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3655260 - 3655344
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||| ||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  3655260 tgatactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaact 3655344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 26941318 - 26941443
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||||||||| | |||||||||||||| ||| ||||||| |||||||||||||||||| | ||||||| ||||| |||||||| ||||       |||    
T  26941318 tgataccatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattataattttgattttatagtgttaacttcaccaaaaaaatca 26941417  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    |||| |||||||||||||||||||||    
T  26941418 ttcttatgacttcaccatagaatttt 26941443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 51213039 - 51213164
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | | |||||||||||  ||||||||||| |||||||||| |||||||||||||| |||||| | |||||||| ||||       |||    
T  51213039 tgatactatgaggactcaacttttgatgccattgtacaaacagtggggtgttgctcattacattttttatgttacagtgttaacttcaccaaaaaagtca 51213138  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    ||||||||||||||||||||||||||    
T  51213139 ttctcatgacttcaccatagaatttt 51213164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 47481623 - 47481515
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 117  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||       ||||||  ||||||||||||    
T  47481623 aacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaacatcattcctatgacttcacca 47481524  T
Q  118 tagaatttt 126  Q
    || ||||||    
T  47481523 taaaatttt 47481515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42506133 - 42506214
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgtta 82  Q
    |||||| ||||| | |||||||||||||| ||||||||||| ||||||| |||||||||||| ||||||||||||| |||||    
T  42506133 tgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtattactcattacaattttgatgttatagtgtta 42506214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 46297835 - 46297945
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    ||||||||||| |  ||||||||||| |||| |||||||||| || ||||||||||||||| |||||||| ||||       ||||| ||||||||||||    
T  46297835 tgaacttttgacgccattgtacaaacagtggtgtgttactcactatatttttgatgttatagtgttaacttcaccagaaaagtcattttcatgacttcac 46297934  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  46297935 catagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 37203185 - 37203060
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||  | ||||||||| ||||||||||||||| |||| ||||||||||||| |||||||| || |       |||    
T  37203185 tgatactatgaggactgaacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaaatca 37203086  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    || | |||||||||||||||||||||    
T  37203085 tttttatgacttcaccatagaatttt 37203060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 35844427 - 35844319
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 117  Q
    |||||||||||| | ||||||||| ||| |||||||||||  ||||||||| ||||||| |||||||| ||||       ||||| ||||||||||||||    
T  35844427 aacttttgatgtcactgtacaaacagtgaggtgttactcacaacatttttgttgttatagtgttaacttcaccagaaaagtcattatcatgacttcacca 35844328  T
Q  118 tagaatttt 126  Q
    |||||||||    
T  35844327 tagaatttt 35844319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4761707 - 4761796
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||| ||||| | |||||||||||||| ||||||||||| |||  ||||||||||||||||||||||| ||||| | |||||| ||||    
T  4761707 tgatactatgaggactgaacttttgatgtcattgtacaaacagtgaagtgttactcattacatttttgatattatagtattaacttcacc 4761796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 4015578 - 4015453
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| | | ||||||| || ||||||||||||  ||| |||||||| |||| |||||||| || |       |||    
T  4015578 tgatactatgaggactgaacttttgatgtcactctacaaacagttgggtgttactcacaacacttttgatgctatagtgttaacttcatcagaaaagtca 4015479  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    ||||||||||||||||||||||||||    
T  4015478 ttctcatgacttcaccatagaatttt 4015453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 21009875 - 21009935
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttata 76  Q
    |||||||||||||| ||| ||||||  ||||||||||||||||||||||||||||||||||    
T  21009875 tgaacttttgatgtcattctacaaatagtggggtgttactcattacatttttgatgttata 21009935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 29099458 - 29099356
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||| ||||| | ||||||||| |||||||||||||||  |||||||| |||||||| |||||||| ||||       ||||||| ||||||||||    
T  29099458 tgaactttagatgtcactgtacaaacagtggggtgttactcacgacattttttatgttatagtgttaacttcaccagaaaagtcattctaatgacttcac 29099359  T
Q  116 cat 118  Q
    |||    
T  29099358 cat 29099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 54828772 - 54828888
Alignment:
Q  14 aatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttc 113  Q
    |||||| |||||||||  ||||  |||||||||||||||||||||||||||||| |||||||| ||||||||  |||       | ||| | ||||||||    
T  54828772 aatgaatttttgatgtcgttgtttaaacggtggggtgttactcattacattttt-atgttatagtgttaactttaccaaaaaaattatttttatgacttc 54828870  T
Q  114 accatagaatttttctta 131  Q
    |||||| |||||||||||    
T  54828871 accataaaatttttctta 54828888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 34133038 - 34132971
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaa 83  Q
    |||||||||||||| ||||||||||| |||||||||||||||  |||||||||||  |||| ||||||    
T  34133038 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaa 34132971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 21193724 - 21193593
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||||||| | | |||||||||||||| | | ||||||| |||||||||||||||  ||| |||||||   | | |||||||| ||||       |||    
T  21193724 tgataccatggggactgaacttttgatgtcactctacaaacagtggggtgttactcacaacacttttgattcaacagtgttaacttcaccagaaaagtca 21193625  T
Q  101 ttctcatgacttcaccatagaatttttcttat 132  Q
    |||||||||||| ||||||||||||| |||||    
T  21193624 ttctcatgactttaccatagaattttccttat 21193593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 37157810 - 37157701
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | ||||||| | ||||||||||||||| |||| ||||||||||||| |||||||| || |        |||| ||||||||||||    
T  37157810 tgaacttttgatgccactgtacaa-cagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaagccattttcatgacttcac 37157712  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  37157711 catagaatttt 37157701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 54505883 - 54505842
Alignment:
Q  44 tggggtgttactcattacatttttgatgttataatgttaact 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  54505883 tggggtgttactcattacatttttgatgttatagtgttaact 54505842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 22451052 - 22450956
Alignment:
Q  35 tacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttttctta 131  Q
    ||||||| ||| |||| |||||| |||| |||||||| |||| |||| ||| ||||       ||||||||||||||||||||||||||||| ||||    
T  22451052 tacaaacagtgaggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaattttcctta 22450956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 22446138 - 22446211
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||||  | |||||||| | |||||||||||||| || |||||||||| ||||||||||||| ||||    
T  22446138 tgaacttttgatgccactgtacaaaag-tggggtgttactcactatatttttgatgatataatgttaacttcacc 22446211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 41585407 - 41585449
Alignment:
Q  43 gtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  41585407 gtggggtgttactcattatatttttgatgttatagtgttaact 41585449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3362371 - 3362282
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||| | |||||||||||||  | ||||||||  ||||| ||||||||| || |||| ||||| |||| |||||||| ||||    
T  3362371 tgataccatgaggagtgaacttttgatgccactgtacaaatagtgggatgttactcactatatttctgatgctatagtgttaacttcacc 3362282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 44186574 - 44186684
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | |||| |||| | |||||||||||||  ||| |||||||| |||| |||||||| ||||       ||||||||  |||||||     
T  44186574 tgaacttttgatgtcactgtataaacagcggggtgttactcacaacacttttgatgctatagtgttaacttcaccaaaaaaatcattctctcgacttcat 44186673  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  44186674 catagaatttt 44186684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 33698263 - 33698185
Alignment:
Q  44 tggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    ||||||||||||||  ||||||||||||||||| |||||||| |||          |||||||||||||||||||||||||||    
T  33698263 tggggtgttactcacaacatttttgatgttatagtgttaacttcactagaga----attctcatgacttcaccatagaatttt 33698185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 11357437 - 11357535
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtgggg-tgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttc 113  Q
    |||||||||||||  | ||||||||| |||||| ||||||||| || | |||||||| |||| |||||||| ||||       ||||||||||||||||    
T  11357437 tgaacttttgatgcaactgtacaaacagtgggggtgttactcactatacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttc 11357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 40936109 - 40935995
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| | |||| ||||  || ||||||||||   ||| |||||||| |||| |||||||| ||||       |||    
T  40936109 tgatactatgaggactgaacttttgatgtcactgtataaacaatgaggtgttactcgcaacacttttgatgctatagtgttaacttcaccagaaaaatca 40936010  T
Q  101 ttctcatgacttcac 115  Q
    |||||||||||||||    
T  40936009 ttctcatgacttcac 40935995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 52041024 - 52041106
Alignment:
Q  44 tggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    ||||| |||||||| |||| ||||||||||||| | |||||| ||||       |||||||||||||||||||  ||||||||    
T  52041024 tggggagttactcactacacttttgatgttatagtattaacttcaccagaaaagtcattctcatgacttcacctcagaatttt 52041106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 11835761 - 11835789
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  11835761 tcattctcatgacttcaccatagaatttt 11835789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 40640652 - 40640680
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  40640652 tcattctcatgacttcaccatagaatttt 40640680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Complemental strand, 43348310 - 43348282
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  43348310 tcattctcatgacttcaccatagaatttt 43348282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 37970598 - 37970704
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||       ||||||||||||||||||    
T  37970598 tgaacttttgatggcattgtacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcac 37970697  T
Q  116 catagaa 122  Q
    |||||||    
T  37970698 catagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 10555266 - 10555391
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| ||||||||||| |||| |||||||||||||||||||| |||||||| |||||||| ||||       |||    
T  10555266 tgatactatgaggattgaacttttgatgtcattgtacaaacagtggagtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtca 10555365  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||| |||||||||    
T  10555366 ttctcatgacttcaccgtagaatttt 10555391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 43643674 - 43643784
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||| ||||| ||||||||||| || | ||||||||||||||||||||||||||||| |||||||| ||||       ||||||||||||||||||    
T  43643674 tgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcac 43643773  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  43643774 catagaatttt 43643784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 1150184 - 1150294
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    ||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||  ||||||| ||||       ||||||| ||||||||||    
T  1150184 tgaacttttgatgtcgttgtacaaacagtgggatgttactcattacatttttgatgttatagcgttaacttcaccaaaaaagtcattcttatgacttcac 1150283  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  1150284 catagaatttt 1150294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 23854495 - 23854620
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| |||| |||||| || |||||||||||||||||||||| |||||||| |||||||| ||||       |||    
T  23854495 tgatactatgaggactgaacttttgatgtcattgcacaaacagttgggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtca 23854594  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||| |||| ||||    
T  23854595 ttctcatgacttcaccgtagactttt 23854620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 1205053 - 1204928
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| ||||||||||| |||  |||||||||| ||||||||| |||||||| |||||||| ||||       |||    
T  1205053 tgatactatgaggactgaacttttgatgtcattgtacaaacagtgatgtgttactcactacattttttatgttatagtgttaacttcaccagaaaagtca 1204954  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||| || ||||||    
T  1204953 ttctcatgacttcaccgtaaaatttt 1204928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 36695045 - 36695160
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||||||||||| |||||||||||||||  ||||||||||| ||||| |||||||| || |       ||||| || |||||||||    
T  36695045 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcac 36695144  T
Q  116 catagaatttttctta 131  Q
    ||||||||||| ||||    
T  36695145 catagaattttcctta 36695160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 13307734 - 13307624
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||  ||| |||||||||||  ||| ||||||||||||| |||||||| ||||       ||||||||||||||||||    
T  13307734 tgaacttttgatgtcactgtacaaatagtgaggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaatcattctcatgacttcac 13307635  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  13307634 catagaatttt 13307624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 30654662 - 30654772
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| |||  |||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||       ||| ||| ||||||||||    
T  30654662 tgaacttttgatgtcattcaacaaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcactcttatgacttcac 30654761  T
Q  116 catagaatttt 126  Q
    |||| ||||||    
T  30654762 cataaaatttt 30654772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 8803889 - 8803963
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||||| ||| ||||||  |||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  8803889 tgaacttttgatgtcattctacaaatagtggagtgttactcattacatttttgatgttatagtgttaacttcacc 8803963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 6098597 - 6098707
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||| ||||||||||||||| || |||||||||| |||| | |||||| ||||       | ||| ||||||||||||    
T  6098597 tgaacttttgatgtcactgtacaaacagtggggtgttactcactatatttttgatgctatagtattaacttcaccaaaaaagttattttcatgacttcac 6098696  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  6098697 catagaatttt 6098707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 16446956 - 16447064
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 117  Q
    |||||||||||  ||| ||||||| ||||||||||||||| |||| ||||||||||||| ||||||||  | |       ||||| ||||||||||||||    
T  16446956 aacttttgatgccattatacaaacagtggggtgttactcactacaattttgatgttatagtgttaactttatcagaaaagtcattttcatgacttcacca 16447055  T
Q  118 tagaatttt 126  Q
    |||||||||    
T  16447056 tagaatttt 16447064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 31933965 - 31934075
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| |||||| |||  |||||||||||||||||| ||||||||| | ||| |||||||| ||||       |||||||||| |||||||    
T  31933965 tgaacttttgatgtcattgtataaagagtggggtgttactcattatatttttgatatcatagtgttaacttcaccaaaaaaatcattctcataacttcac 31934064  T
Q  116 catagaatttt 126  Q
      |||||||||    
T  31934065 gttagaatttt 31934075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12876235 - 12876151
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||| ||||| | |||||||||||||| ||||||||||| || ||||||||||||  |||||||| || ||||| ||||||||    
T  12876235 tgatactatgaggactgaacttttgatgtcattgtacaaacagttgggtgttactcacaacattttttatattatagtgttaact 12876151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 16222989 - 16222864
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| ||||||||||| ||||||   |||||| || |||||| |||||||| |||||| | ||||       |||    
T  16222989 tgatactatgaggactgaacttttgatgtcattgtacaaactgtggggaactactcactatattttttatgttatagtgttaaattcaccagaaaagtca 16222890  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    ||||||||| |||||| |||||||||    
T  16222889 ttctcatgatttcaccgtagaatttt 16222864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 27082902 - 27083027
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | ||||||||| |||  | || |||||| ||||||||||||||| |||| |||||||| |||| |||||||| ||||       |||    
T  27082902 tgatactatgaggactgaacttttaatgccactgcacaaacagtggggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtca 27083001  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
     ||| |||||||||||||||||||||    
T  27083002 gtctgatgacttcaccatagaatttt 27083027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 9864259 - 9864192
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaa 83  Q
    |||||||||||||| ||||||||||| |||||||||||||||  |||||||||||  |||| ||||||    
T  9864259 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaa 9864192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 1149712 - 1149762
Alignment:
Q  17 gaacttttgatgtgattgtacaaacggtggggtgttactcattacattttt 67  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  1149712 gaacttttgatgtcattgtacaaacagtgggttgttactcattacattttt 1149762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40862545 - 40862456
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattaca-tttttgatgttataatgttaactacacc 90  Q
    |||||||||||||  |||||||||||||  ||||||||||| |||||||||||||||  ||| |||||||| ||||| |||||||| ||||    
T  40862545 tgataccatgagac-tgaacttttgatgccattgtacaaacagtggggtgttactcacaacattttttgatattatagtgttaacttcacc 40862456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 34895078 - 34894968
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | | ||||||| |||| |||||||||| |||| | ||||||||||| |||||||| || |       ||||| ||||||||||||    
T  34895078 tgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcac 34894979  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  34894978 catagaatttt 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 38644069 - 38643979
Alignment:
Q  36 acaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    |||||| |||||||||||||||  ||| ||||||||||||| ||||||||  |||       |||||||||||| ||||||||||||||||    
T  38644069 acaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttgaccaaaaaagtcattctcatgatttcaccatagaatttt 38643979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 465953 - 465840
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||| ||||||||  | ||||||||| |||||||||||||||  ||| ||||||||||||  |||||||| ||||       ||||| | ||||||||||    
T  465953 tgaatttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatcgtgttaacttcaccacaaaagtcattttaatgacttcac 465854  T
Q  116 catagaatttttct 129  Q
    |||| |||||||||    
T  465853 cataaaatttttct 465840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 7891037 - 7891139
Alignment:
Q  17 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacc 116  Q
    ||||||||||||  |||||||||||||||| ||||||         |||||||||||||| |||||||| |||        |||||||||||||||||||    
T  7891037 gaacttttgatgccattgtacaaacggtggagtgtta---------tttttgatgttatagtgttaacttcacaaaaaaagtcattctcatgacttcacc 7891127  T
Q  117 atagaatttttc 128  Q
    ||||||||||||    
T  7891128 atagaatttttc 7891139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 34952110 - 34952179
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||| | ||||||||| ||||| |||||||||  ||| |||||||| |||| ||||||||    
T  34952110 tgaacttttgatgtcactgtacaaacagtgggctgttactcacaacacttttgatgatatagtgttaact 34952179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 15009306 - 15009243
Alignment:
Q  63 tttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||| |||||||| ||||       ||||||| |||||||||||||||||||||    
T  15009306 tttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaatttt 15009243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 5300107 - 5300135
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  5300107 tcattctcatgacttcaccatagaatttt 5300135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Complemental strand, 7998392 - 7998364
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  7998392 tcattctcatgacttcaccatagaatttt 7998364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 35459859 - 35459887
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  35459859 tcattctcatgacttcaccatagaatttt 35459887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 39099270 - 39099298
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  39099270 tcattctcatgacttcaccatagaatttt 39099298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 37109959 - 37109849
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||       ||||| | ||||||||||    
T  37109959 tgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcac 37109860  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  37109859 catagaatttt 37109849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 17842664 - 17842775
Alignment:
Q  20 cttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccata 119  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||       ||||| | ||||||||||||||    
T  17842664 cttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcaccata 17842763  T
Q  120 gaatttttctta 131  Q
    ||||||| ||||    
T  17842764 gaattttcctta 17842775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 18797429 - 18797301
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||   |||||||| ||||       |||    
T  18797429 tgatactatgaggattgaacttttgatgtcattgtacaaacagtggggtgttactcattacattttttatgttag--tgttaacttcaccaaaaaagtca 18797332  T
Q  101 ttctcatgacttcaccatagaatttttctta 131  Q
    |||||||||||||||||||||||||| ||||    
T  18797331 ttctcatgacttcaccatagaattttcctta 18797301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 27283844 - 27283721
Alignment:
Q  3 ataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcatt 102  Q
    |||| ||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||       |||||    
T  27283844 atactatgaggactgaacttttgatttcattgtacaaacggtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaatcatt 27283745  T
Q  103 ctcatgacttcaccatagaatttt 126  Q
     | || ||||||||||||||||||    
T  27283744 tttataacttcaccatagaatttt 27283721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 7334896 - 7334771
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||| |||||||| || |       |||    
T  7334896 tgatactatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatattttatgttatagtgttaacttcatcaaaaaagtca 7334797  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    |||||| ||||||||| |||||||||    
T  7334796 ttctcacgacttcaccgtagaatttt 7334771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 38258647 - 38258522
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||       |||    
T  38258647 tgatactatgaggattgaacttttgatgtcattgtacaaacggtgtggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatca 38258548  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    || | ||||||||||| |||||||||    
T  38258547 tttttatgacttcaccgtagaatttt 38258522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 32821127 - 32821237
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||||||||||| |||| |||||||||| |||||||||||||||||| |||||||| ||||       ||||| ||||||||||||    
T  32821127 tgaacttttgatgccattgtacaaacagtggtgtgttactcactacatttttgatgttatattgttaacttcaccaaaaaaatcattttcatgacttcac 32821226  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  32821227 catagaatttt 32821237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 24211828 - 24211718
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||| || |||| || ||||||||||||||||||||||||||||||| |||||||| ||||       ||||||| ||||||||||    
T  24211828 tgaacttttgatgccattctataaacagtagggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcac 24211729  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  24211728 catagaatttt 24211718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 30055629 - 30055503
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactaca-ccnnnnnnntc 99  Q
    |||||| ||||| | |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||| || |        ||    
T  30055629 tgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaaagtc 30055530  T
Q  100 attctcatgacttcaccatagaatttt 126  Q
    ||||| |||||||||||||||||||||    
T  30055529 attcttatgacttcaccatagaatttt 30055503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 27421453 - 27421565
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||||||||||| |||| ||||||||||  ||| ||||||||||||| |||||||| ||||       ||||| ||| ||||||||    
T  27421453 tgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattatcacgacttcac 27421552  T
Q  116 catagaatttttc 128  Q
    |||||||||||||    
T  27421553 catagaatttttc 27421565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 5657555 - 5657665
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | ||||||||| |||||||||||||||  ||| ||||||||||||| |||||||| |||        ||||||||||||||||||    
T  5657555 tgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcactagaaaagtcattctcatgacttcac 5657654  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  5657655 catagaatttt 5657665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 37347124 - 37346999
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| | |||||||||  ||||||||||||||||| |||||||||| |||| | |||||| ||||       |||    
T  37347124 tgatactatgaggactgaacttttgatgtcactgtacaaacaatggggtgttactcattatatttttgatggtatagtattaacttcaccaaaaaaatca 37347025  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    || |||||||||||||||| ||||||    
T  37347024 ttttcatgacttcaccataaaatttt 37346999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 31579165 - 31579253
Alignment:
Q  38 aaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||| ||||       | ||||| |||||||||||||||||||||    
T  31579165 aaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaattattcttatgacttcaccatagaatttt 31579253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 38053581 - 38053499
Alignment:
Q  8 atgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    ||||||| |||||||||||||| ||||||||||| || |||| ||||||||||||||||| |||||||| | |||||| ||||    
T  38053581 atgagaactgaacttttgatgtcattgtacaaacagtagggttttactcattacattttttatgttatagtattaacttcacc 38053499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 23111277 - 23111163
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||||||||||  |||| ||||||||||  | ||||||||||||||| |||||||| ||||       ||||| ||||||||||||    
T  23111277 tgaacttttgatgccattgtacaaatagtggtgtgttactcacaatatttttgatgttatagtgttaacttcaccagaaaaatcattttcatgacttcac 23111178  T
Q  116 catagaatttttctt 130  Q
    || ||||||||||||    
T  23111177 cacagaatttttctt 23111163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 12390706 - 12390814
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 117  Q
    |||||||||||| | || |||||| ||||| |||||||||||||| ||||||||||||| |||||||| ||||       ||  ||| ||||||||||||    
T  12390706 aacttttgatgtcactgcacaaacagtgggatgttactcattacacttttgatgttatagtgttaacttcaccaaaaaagtcgatctgatgacttcacca 12390805  T
Q  118 tagaatttt 126  Q
    |||||||||    
T  12390806 tagaatttt 12390814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 4583006 - 4582896
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||||||||||  |||||||||||||||  |||||||||||  |||| | |||||| ||||       ||||| || |||||||||    
T  4583006 tgaacttttgatgtcattgtacaaatagtggggtgttactcacaacatttttgatactatagtattaacttcaccagaaaagtcattttcgtgacttcac 4582907  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  4582906 catagaatttt 4582896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 9355892 - 9356010
Alignment:
Q  8 atgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcat 107  Q
    ||||||| | |||||||||||| | ||||||||| ||||||| || |||| ||||||||| ||| |||| |||||| | ||||       ||||||||||    
T  9355892 atgagaactaaacttttgatgtcactgtacaaacagtggggtattgctcactacattttttatgctatagtgttaaattcaccaaaatggtcattctcat 9355991  T
Q  108 gacttcaccatagaatttt 126  Q
    |||||||||||| ||||||    
T  9355992 gacttcaccataaaatttt 9356010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 21991723 - 21991613
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | ||||||||| ||||||||||||||   ||| |||||||| |||| |||||||| ||||       ||||||||||||||||||    
T  21991723 tgaacttttgatgacactgtacaaacagtggggtgttactcgcaacaattttgatgctatagtgttaacttcaccataaaaatcattctcatgacttcac 21991624  T
Q  116 catagaatttt 126  Q
    | |||||||||    
T  21991623 cctagaatttt 21991613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 43686127 - 43686018
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||||||||||| ||||| |||||||||  ||||||||||| ||||| |||||||| ||||       ||||| || |||||||||    
T  43686127 tgaacttttgatgccattgtacaaacagtggg-tgttactcacaacatttttgatattatagtgttaacttcacccaaaaagtcattttcgtgacttcac 43686029  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  43686028 catagaatttt 43686018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 8861370 - 8861262
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 117  Q
    |||||||||||  | ||||||||| ||||||||||| |||| ||| |||||||| |||| |||||||| | |        ||||||||||||||||||||    
T  8861370 aacttttgatgccactgtacaaacagtggggtgttattcataacacttttgatgctatagtgttaacttcgcgagaaaagtcattctcatgacttcacca 8861271  T
Q  118 tagaatttt 126  Q
    |||||||||    
T  8861270 tagaatttt 8861262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 10481692 - 10481622
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtgggg-tgttactcattacatttttgatgttataatgttaact 85  Q
    |||| ||||||||| ||||||||||| |||||| |||||||||||| |||||| |||||||| ||||||||    
T  10481692 tgaatttttgatgtcattgtacaaacagtgggggtgttactcattatattttttatgttatagtgttaact 10481622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 26980410 - 26980336
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||||  | ||||||||| |||||||||||||||  ||| |||||||| ||||||||||||| ||||    
T  26980410 tgaacttttgatgccactgtacaaaccgtggggtgttactcacaacacttttgatgctataatgttaacttcacc 26980336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 26524386 - 26524516
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | || ||||||||||  | || ||||||  ||| |||||| |||  ||||||||||||||||| |||||||  ||||       |||    
T  26524386 tgatactatgaggactggacttttgatgccactgcacaaacaatggagtgttagtcacaacatttttgatgttatagtgttaacatcaccagaaaagtca 26524485  T
Q  101 ttctcatgacttcaccatagaatttttctta 131  Q
    |||||||||||||||||||||||||| ||||    
T  26524486 ttctcatgacttcaccatagaattttcctta 26524516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 48928637 - 48928747
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  |  |||||||  |||||||| |||||| |||| ||||||||||||| |||| ||| ||||       ||||||||||||||||||    
T  48928637 tgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgacttcac 48928736  T
Q  116 catagaatttt 126  Q
    |||| ||||||    
T  48928737 cataaaatttt 48928747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 44413454 - 44413522
Alignment:
Q  17 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    ||||||||||| | | |||||||||  |||||||||||||| || ||||||||||||||| ||||||||    
T  44413454 gaacttttgatttcagtgtacaaacattggggtgttactcactatatttttgatgttatagtgttaact 44413522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11071308 - 11071233
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttata 76  Q
    |||||| ||||||| |||||||||||||| | ||||||||| |||| |||||||||  || |||||||||| ||||    
T  11071308 tgatactatgagaactgaacttttgatgtcactgtacaaacagtggagtgttactcgctatatttttgatgatata 11071233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 32432539 - 32432485
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgat 70  Q
    |||||||||||||| |||||||||||  ||||||||||||||  |||||||||||    
T  32432539 tgaacttttgatgtcattgtacaaacaatggggtgttactcacaacatttttgat 32432485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29173642 - 29173573
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgat 70  Q
    |||||| ||||| | |||||||||||||| ||||||||||| |||| ||||||||||  ||| |||||||    
T  29173642 tgatactatgaggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgat 29173573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 31520797 - 31520907
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | |||||||||  ||| |||||||||| || |||||||||| |||| | |||||| ||||       ||||| |||||||||||     
T  31520797 tgaacttttgatgtcactgtacaaacaatggagtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagtcattttcatgacttcat 31520896  T
Q  116 catagaatttt 126  Q
    |||| ||||||    
T  31520897 cataaaatttt 31520907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 34362208 - 34362291
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||| ||||||| |||||||| ||||  | ||||||||| |||||||||||||||  ||| |||||||| |||| ||||||||    
T  34362208 tgatactatgagaactgaacttt-gatgccactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaact 34362291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 22687306 - 22687257
Alignment:
Q  36 acaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||| |||| ||||||||||  ||||||||||||||||| ||||||||    
T  22687306 acaaacagtggagtgttactcacaacatttttgatgttatagtgttaact 22687257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 33688336 - 33688405
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||  | || |||||| || || |||||||||| ||| ||||||||||||| ||||||||    
T  33688336 tgaacttttgatgccactggacaaacagtaggatgttactcataacacttttgatgttatagtgttaact 33688405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 12165837 - 12165765
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||  | ||||||||| |||||||||||||||  ||| ||| |||| |||| |||||||| ||||    
T  12165837 aacttttgatgccactgtacaaacagtggggtgttactcacaacactttggatgctatagtgttaacttcacc 12165765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 22974137 - 22974255
Alignment:
Q  8 atgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcat 107  Q
    ||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||| ||||       ||||||||||    
T  22974137 atgagaattgaacttttgatgttattgtacaaacagtgggatgttactcattacttttttgatgttatagtgttaacttcaccaaaaaaatcattctcat 22974236  T
Q  108 gacttcaccatagaatttt 126  Q
     ||||||||||||||||||    
T  22974237 aacttcaccatagaatttt 22974255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 22255302 - 22255219
Alignment:
Q  8 atgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacat-ttttgatgttataatgttaactacacc 90  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  22255302 atgagaactgaacttttgatgccattgtacaaacggtggggtgttactcattacattttttgatgttataatgttaacttcacc 22255219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 31705677 - 31705784
Alignment:
Q  19 acttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccat 118  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||       ||||| | |||||||||||||    
T  31705677 acttttgatgtcattgtacaaacggtagggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcaccat 31705776  T
Q  119 agaatttt 126  Q
    ||||||||    
T  31705777 agaatttt 31705784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 24886231 - 24886142
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||| ||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||||    
T  24886231 tgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatagtattaacttcacc 24886142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14919576 - 14919660
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||| ||||| | |||||||||||||| ||| || |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  14919576 tgatactatgaggactgaacttttgatgtcattatataaacagtgaggtgttactcattacatttttgatgttataatgttaact 14919660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 17158094 - 17158162
Alignment:
Q  17 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  17158094 gaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaact 17158162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 27318543 - 27318662
Alignment:
Q  9 tgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatg 108  Q
    |||||| | |||||||||||| ||||||||||| |||| |||||||||| ||||||||| ||||| || |||||||| ||||       |||||||||||    
T  27318543 tgagaactaaacttttgatgtcattgtacaaacagtggtgtgttactcactacattttttatgttttagtgttaacttcaccagaaaaatcattctcatg 27318642  T
Q  109 acttcaccatagaatttttc 128  Q
    |||||||| | |||||||||    
T  27318643 acttcaccgttgaatttttc 27318662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 36860535 - 36860416
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||||||||||| |||||||||||||||  |||||||| ||  |||| |||||||| ||||       ||||| || |||||||||    
T  36860535 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacattttttatactatagtgttaacttcaccagaaaaatcattttcgtgacttcac 36860436  T
Q  116 catagaatttttcttatgta 135  Q
    ||||||||||| ||||||||    
T  36860435 catagaattttccttatgta 36860416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5830028 - 5829955
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgtta 74  Q
    |||||| ||||| | | |||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  5830028 tgatactatgaggactaaacttttgatgtcattgtacaaacggtagggtgttactcattacattttttatgtta 5829955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 19119971 - 19119861
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||| |||||||||||||    ||| |||||||| |||| |||||||| ||||       ||||||||||||||||||    
T  19119971 tgaacttttgatgtcactgtacaaacagtggggtgttactagcaacacttttgatgctatagtgttaacttcaccacaaaagtcattctcatgacttcac 19119872  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  19119871 catagaatttt 19119861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30969372 - 30969502
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| |||||| |||  |||||||||||||||  ||| ||||||||||||| |||||||| ||||       |||    
T  30969372 tgatactatgaggactgaacttttgatgtcattgtataaatagtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagataaatca 30969471  T
Q  101 ttctcatgacttcaccatagaatttttctta 131  Q
    ||||||||||||||   ||||||||| ||||    
T  30969472 ttctcatgacttcattgtagaattttcctta 30969502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 36866874 - 36866764
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||||||||||| |||||||||||||||  | ||||||||| ||||| |||||||| ||||       ||||| || |||||||||    
T  36866874 tgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatattatagtgttaacttcaccagaaaaatcattttcgtgacttcac 36866775  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  36866774 catagaatttt 36866764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 38528299 - 38528409
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | |||| ||||  ||||||||||||||||||| ||||||||||||| |||||||| || |        |||| ||||||||||||    
T  38528299 tgaacttttgatgtcactgtataaacaatggggtgttactcattacaattttgatgttatagtgttaacttcatcagaaaaaccattttcatgacttcac 38528398  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  38528399 catagaatttt 38528409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 40133497 - 40133387
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||||||||||  |||||||||||||||  |||||||||||  ||||||||||||| ||||       ||||| || |||||||||    
T  40133497 tgaacttttgatgccattgtacaaatagtggggtgttactcacaacatttttgatactataatgttaacttcaccacaaaagtcattttcgtgacttcac 40133398  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  40133397 catagaatttt 40133387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 35826531 - 35826656
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| | |||||||||  ||  |||||||||| |||||||||||||||||| | |||||| |||        |||    
T  35826531 tgatactatgaggactgaacttttgatgtcactgtacaaacaatgaagtgttactcagtacatttttgatgttatagtattaacttcacaaaaaaagtca 35826630  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    || |||||||||||||||||||||||    
T  35826631 ttatcatgacttcaccatagaatttt 35826656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 43308700 - 43308783
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||| ||||| | |||||||||||||  ||||||| ||| ||||| ||||| |||||||||||||||||||||||||||||||    
T  43308700 tgatactatgaggactgaacttttgatgccattgtacgaacagtggg-tgttattcattacatttttgatgttataatgttaact 43308783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 699262 - 699150
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||| ||||||||||||||| || |||||| ||| |||| |||||||| || |       |||||||||| |||||||    
T  699262 tgaacttttgatgtcactgtacaaacagtggggtgttactcactagattttttatgctatagtgttaacttcatcagaaaagtcattctcataacttcac 699163  T
Q  116 catagaatttttc 128  Q
    |||| ||||||||    
T  699162 cataaaatttttc 699150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 15724596 - 15724492
Alignment:
Q  22 tttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccataga 121  Q
    |||||||| |||||| |||| |||||||||||||||  | | ||||||||||||| |||||||| ||||       |||||||||| |||||||||||||    
T  15724596 tttgatgtcattgtataaacagtggggtgttactcacaaaacttttgatgttatagtgttaacttcaccaaaaaagtcattctcataacttcaccataga 15724497  T
Q  122 atttt 126  Q
    |||||    
T  15724496 atttt 15724492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 7208926 - 7209000
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||||| | |||||||||||| ||||||||||| || ||||||| |||||| |||||||||| ||||    
T  7208926 tgaacttttgatgtcaatgtacaaacggtagggtgttactcgttgcattttttatgttacaatgttaacttcacc 7209000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 8741949 - 8742060
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtgggg-tgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttca 114  Q
    |||||||||||||  |||||||||||  ||||| |||||||||  ||| |||||||| |||| |||||||| ||||       |||||||||||||||||    
T  8741949 tgaacttttgatgccattgtacaaacaatgggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttca 8742048  T
Q  115 ccatagaatttt 126  Q
    ||||||||||||    
T  8742049 ccatagaatttt 8742060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 14409416 - 14409499
Alignment:
Q  43 gtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    |||||||| |||||| |||||||||||||||||| |||| ||| ||||       |||||||||||||||||||||||||||||    
T  14409416 gtggggtgctactcactacatttttgatgttatagtgttgacttcaccagaaaaatcattctcatgacttcaccatagaatttt 14409499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 1429208 - 1429318
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||| ||||||||  | ||||||||| ||||||||||||||| || |||||||||| |||| |||||||| ||||       ||||| ||||||||||||    
T  1429208 tgaatttttgatgccagtgtacaaacagtggggtgttactcactatatttttgatgctatagtgttaacttcaccaaaagagtcattttcatgacttcac 1429307  T
Q  116 catagaatttt 126  Q
    |||||| ||||    
T  1429308 catagattttt 1429318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 5112376 - 5112486
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | ||||||||| ||||||||||||||| || |||||| |||||||| | |||||| ||||       ||||| ||||||||||||    
T  5112376 tgaacttttgatgccactgtacaaacagtggggtgttactcactatattttttatgttatagtattaacttcaccaaaaaagtcattttcatgacttcac 5112475  T
Q  116 catagaatttt 126  Q
    |||| ||||||    
T  5112476 cataaaatttt 5112486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 7693342 - 7693232
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | ||||||||| ||||| |||||||||  ||| ||||||||||||| |||||||| ||||       ||||| | ||||||||||    
T  7693342 tgaacttttgatgccactgtacaaacagtgggatgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagtcattttaatgacttcac 7693243  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  7693242 catagaatttt 7693232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 35511540 - 35511650
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | | ||||||| |||| |||||||||| |||| | |||||||||||||||||||| || |       ||||| ||||||||||||    
T  35511540 tgaacttttgatgtcactttacaaacagtggagtgttactcactacagtgttgatgttataatgttaacttcatcagaaacgtcattttcatgacttcac 35511639  T
Q  116 catagaatttt 126  Q
    ||||| |||||    
T  35511640 cataggatttt 35511650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 9200343 - 9200271
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||| | ||||||||| |||||||||||||||  ||| ||||||||||||| |||||||| ||||    
T  9200343 aacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgttatagtgttaacttcacc 9200271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 12910445 - 12910352
Alignment:
Q  33 tgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    ||||||||| |||||||||||| || || ||||||||||||||| | |||||| ||||       ||||| |||||||||||||||||||||||    
T  12910445 tgtacaaacagtggggtgttacgcactatatttttgatgttatagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaatttt 12910352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 26268184 - 26268075
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 117  Q
    |||||||||||| |  |||||||| |||||||||||||||  ||| |||||||| |||| |||||||| ||||       ||||||||||||||||||      
T  26268184 aacttttgatgtcaccgtacaaacagtggggtgttactcaaaacacttttgatgctatagtgttaacttcaccagaaaaatcattctcatgacttcactg 26268085  T
Q  118 tagaattttt 127  Q
    ||||||||||    
T  26268084 tagaattttt 26268075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 39572946 - 39572821
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||||| |||||||||||||| | || |||||| |||| ||||||||||  |||||||| || ||||| | ||||||  ||        |||    
T  39572946 tgatactatgagaactgaacttttgatgtcactgcacaaacagtggagtgttactcacaacattttttatattatagtattaacttaactagaaaagtca 39572847  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    ||||||||||||||||||||||||||    
T  39572846 ttctcatgacttcaccatagaatttt 39572821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 5837667 - 5837555
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||| ||||||||| | ||||||||| |||||||||||||||  ||| |||||||| |||| ||||| || ||||       |||||||||||| |||||    
T  5837667 tgaaattttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaccttcaccagaaaagtcattctcatgaattcac 5837568  T
Q  116 catagaatttttc 128  Q
    | |||||||||||    
T  5837567 cgtagaatttttc 5837555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 27330416 - 27330303
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||||||||||| ||  |||||||||||  ||| ||||||||||||| |||||||| ||||       |||||| || ||||||||    
T  27330416 tgaacttttgatgccattgtacaaacagtaaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcac 27330319  T
Q  116 catagaatttttctta 131  Q
    ||||||||||| ||||    
T  27330318 catagaattttcctta 27330303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 25500991 - 25501102
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 117  Q
    |||||||||||  | ||||||||| ||| ||||||| |||  ||| |||||||| |||| ||||||||  |||       ||||||||||||||||||||    
T  25500991 aacttttgatggcagtgtacaaacagtgaggtgttattcacaacacttttgatgctatagtgttaactttaccagaaaagtcattctcatgacttcacca 25501090  T
Q  118 tagaatttttct 129  Q
    ||||||||||||    
T  25501091 tagaatttttct 25501102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 26317774 - 26317857
Alignment:
Q  43 gtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||| ||| ||||||||||||||| |||||||| ||||       ||||| ||||||||||| |||||||||||    
T  26317774 gtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaatttt 26317857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 22255659 - 22255618
Alignment:
Q  44 tggggtgttactcattacatttttgatgttataatgttaact 85  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  22255659 tggggtgttactcattacatttttgatgttatagtgttaact 22255618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 23116285 - 23116354
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    ||||||||||||   | ||||||||| |||||||| |||||| |||| ||||||||||||||||||||||    
T  23116285 tgaacttttgattccactgtacaaacagtggggtgctactcactacagttttgatgttataatgttaact 23116354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 32563261 - 32563151
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | |||||| || |||| ||||||||||  ||| ||||||||||||| |||||||| || |       ||||| | ||||||||||    
T  32563261 tgaacttttgatgtcactgtacagacagtggagtgttactcacaacacttttgatgttatagtgttaacttcatcagaaaaatcattttaatgacttcac 32563162  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  32563161 catagaatttt 32563151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 35504477 - 35504427
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttt 66  Q
    |||||||||||||| ||  ||||||||||| ||||||||||||||||||||    
T  35504477 tgaacttttgatgtcatcatacaaacggtgaggtgttactcattacatttt 35504427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 131
Target Start/End: Original strand, 13956425 - 13956523
Alignment:
Q  33 tgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttttctta 131  Q
    ||||||||| ||| ||||||||||| |||| ||||||||||||| |||||||| ||         ||||| ||||||||||||| ||||||||| ||||    
T  13956425 tgtacaaacagtgaggtgttactcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttcctta 13956523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 21088829 - 21088880
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacattttt 67  Q
    |||||||||||||| ||||||||||| ||||||||| |||||  ||||||||    
T  21088829 tgaacttttgatgtcattgtacaaacagtggggtgtcactcacaacattttt 21088880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 5748520 - 5748478
Alignment:
Q  43 gtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||||||| |||||||| |||||| ||||||||    
T  5748520 gtggggtgttactcattatatttttgacgttatagtgttaact 5748478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 33908360 - 33908245
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||  |  |||||||| |||| ||| |||||| |||| |||||||| |||| |||| ||| ||||       |||    
T  33908360 tgatactatgaggactgaacttttgatgccaccgtacaaacagtggagtgctactcactacacttttgatgatatagtgttgacttcaccagaaagttca 33908261  T
Q  101 ttctcatgacttcacc 116  Q
    ||||||||||||||||    
T  33908260 ttctcatgacttcacc 33908245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 22980905 - 22980795
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||||  ||||| ||||||| ||||||| |  |||||||||  |||| |||||||| ||||       |||||||||| ||||||     
T  22980905 tgaacttttgatgtcattgctcaaacagtggggtattactcactgtatttttgatactatagtgttaacttcaccagaaaagtcattctcataacttcat 22980806  T
Q  116 catagaatttt 126  Q
    |||| ||||||    
T  22980805 cataaaatttt 22980795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 31786694 - 31786819
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||  | ||||||||| ||||||   | |||| ||||||||| ||| |||| |||||||| ||||       |||    
T  31786694 tgatactatgaggattgaacttttgatgccactgtacaaacagtggggcagtgctcactacatttttcatgctatagtgttaacttcaccaaaaaagtca 31786793  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    ||||||  ||||||| ||||||||||    
T  31786794 ttctcactacttcactatagaatttt 31786819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 42342840 - 42342776
Alignment:
Q  21 ttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    ||||||||| | |||| |||| ||||||| |||||||  ||||||||||||||||| | ||||||    
T  42342840 ttttgatgtcactgtataaacagtggggtattactcacaacatttttgatgttatagtattaact 42342776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 8014 - 7885
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||| |||||||| || |       |||    
T  8014 tgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatgttatagtgttaacttcatcaaaaaagtca 7915  T
Q  101 ttctcatgacttcaccatagaatttttctt 130  Q
    |||| || ||||||||||||||||||||||    
T  7914 ttcttataacttcaccatagaatttttctt 7885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 4318895 - 4319005
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| ||||       ||||||||||||||||||    
T  4318895 tgaacttttgatgtcactgtacaaacagtggggtgttactcataacacttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcac 4318994  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  4318995 catagaatttt 4319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 1945946 - 1945829
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc-nnnnnnntcattctcatgacttca 114  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||        ||||||| |||||||||    
T  1945946 tgaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaagtcattcttatgacttca 1945847  T
Q  115 ccatagaatttttcttat 132  Q
    || ||||||||| |||||    
T  1945846 ccgtagaattttccttat 1945829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 8513345 - 8513235
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||| |||||||||||||||  ||| ||||||| ||||| |||||||| ||||       ||||||||||||||||||    
T  8513345 tgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatattatagtgttaacttcaccagaaaagtcattctcatgacttcac 8513246  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  8513245 catagaatttt 8513235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 3880011 - 3880121
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||||||||||| || ||||||||||||  ||| |||||||  ||||||||||||| ||||       |||||||| |||||||||    
T  3880011 tgaacttttgatgtcattgtacaaacagtagggtgttactcacaacacttttgatactataatgttaacttcaccagaaaagtcattctcgtgacttcac 3880110  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  3880111 catagaatttt 3880121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 5627503 - 5627393
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||| ||||||  |||||||||||||||||| |||||| |||||||| |||||||| ||||       ||||||| ||||||||||    
T  5627503 tgaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcac 5627404  T
Q  116 catagaatttt 126  Q
    | |||||||||    
T  5627403 cttagaatttt 5627393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 29182275 - 29182160
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | |||| |||| |||||||||||||||  ||| ||||||||||||| |||||||| || |       ||||||||||||||||||    
T  29182275 tgaacttttgatgacactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcatcaataaaatcattctcatgacttcac 29182176  T
Q  116 catagaatttttctta 131  Q
    |||| |||||||||||    
T  29182175 cataaaatttttctta 29182160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 7055287 - 7055397
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||| ||||||  ||| ||||||||| |||| |||||| |||||||| |||||||| ||||       ||||||| ||||||||||    
T  7055287 tgaacttttgatgtcattctacaaatagtgaggtgttactaattatattttttatgttatagtgttaacttcaccaaaaaaatcattcttatgacttcac 7055386  T
Q  116 catagaatttt 126  Q
    |||| ||||||    
T  7055387 cataaaatttt 7055397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 7235106 - 7235216
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  |  |||||||| |||||||| |||||| |||| ||||||||||||| |||| ||| ||||       |||||||||| |||||||    
T  7235106 tgaacttttgatggcaccgtacaaacagtggggtgctactcactacacttttgatgttatagtgttgacttcaccggaaaagtcattctcataacttcac 7235205  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  7235206 catagaatttt 7235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 18498561 - 18498435
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtgggg-tgttactcattacatttttgatgttataatgttaactacaccnnnnnnntc 99  Q
    |||||| ||||| | |||||||||||||  | ||||||||| |||||| |||| |||| |||| |||||||| ||||||||||||| ||||       ||    
T  18498561 tgatactatgaggactgaacttttgatgccactgtacaaactgtgggggtgttgctcactacacttttgatgctataatgttaacttcaccaggaaagtc 18498462  T
Q  100 attctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||| ||||| ||||    
T  18498461 attctcatgacttcactatagattttt 18498435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 6089020 - 6088908
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | | ||||||| |||||| ||||||||  ||| |||||||  |||| |||||||| ||||       ||||||||||||||||||    
T  6089020 tgaacttttgatgccactttacaaacagtggggcgttactcacaacacttttgatactatagtgttaacttcaccagaaaaatcattctcatgacttcac 6088921  T
Q  116 catagaatttttc 128  Q
    |||||||||||||    
T  6088920 catagaatttttc 6088908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 30353478 - 30353542
Alignment:
Q  64 ttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttttc 128  Q
    |||||||||||||||||||||| ||||       |||||||||||||||||||||||||||||||    
T  30353478 ttttgatgttataatgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttttc 30353542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 15491727 - 15491658
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||  | ||||||||  |||||||||||||||  ||| ||||||||||| ||||||||||    
T  15491727 tgaacttttgatgccactgtacaaatagtggggtgttactcacaacacttttgatgttacaatgttaact 15491658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 33893074 - 33893143
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    ||||||||| || | ||||||||||  |||||||||||||||  ||| ||||||||||||| ||||||||    
T  33893074 tgaacttttaatatcattgtacaaatagtggggtgttactcacaacacttttgatgttatagtgttaact 33893143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 6091255 - 6091313
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgtta 74  Q
    |||||||||||||  |||||||||||  ||| |||||||||| ||||||||| ||||||    
T  6091255 tgaacttttgatggcattgtacaaacaatggtgtgttactcactacattttttatgtta 6091313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 20768162 - 20768088
Alignment:
Q  52 tactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    |||||| |||| |||||||| |||| |||| ||| ||||       |||||||||||||||||||||||||||||    
T  20768162 tactcactacacttttgatgctatagtgttgacttcaccagaaaagtcattctcatgacttcaccatagaatttt 20768088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 21017184 - 21017298
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||||||||||   ||||||||||||||  |||||||| ||  || |||||||||| ||||       ||||| || |||||||||    
T  21017184 tgaacttttgatgccattgtacaaataatggggtgttactcacaacattttttatactacaatgttaacttcaccaaaaaagtcattttcgtgacttcac 21017283  T
Q  116 catagaatttttctt 130  Q
    | || ||||||||||    
T  21017284 cgtataatttttctt 21017298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 8e-27; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 25184225 - 25184115
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||| ||||| ||||||||||| || | ||||||||||||||||||||||||||||| |||||||| ||||       ||||||||||||||||||    
T  25184225 tgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcac 25184126  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  25184125 catagaatttt 25184115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 27396726 - 27396612
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 117  Q
    |||||||||||| ||||||||||| || ||||||||||||| ||| |||| ||| ||||||||||||| ||||       ||||||||||||||||||||    
T  27396726 aacttttgatgtcattgtacaaacagtagggtgttactcataacacttttaatgctataatgttaacttcaccagaaaagtcattctcatgacttcacca 27396627  T
Q  118 tagaatttttcttat 132  Q
    |||||||||||||||    
T  27396626 tagaatttttcttat 27396612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 34361590 - 34361709
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    ||||||||| |||| ||| ||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||       ||||||| ||||||||||    
T  34361590 tgaacttttaatgtcattctacaaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcac 34361689  T
Q  116 catagaatttttcttatgta 135  Q
    ||||||||||| ||| ||||    
T  34361690 catagaattttccttgtgta 34361709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 55477975 - 55478110
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacg----gtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnn 96  Q
    |||||| ||||| | |||||||||||||| |||||||||||     |||| ||||||||| ||||||||||||||||||| |||||||| ||||          
T  55477975 tgatactatgaggactgaacttttgatgtcattgtacaaacaaacagtggagtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaa 55478074  T
Q  97 ntcattctcatgacttcaccatagaatttttcttat 132  Q
     ||||||||||||||||||||||||||||| |||||    
T  55478075 atcattctcatgacttcaccatagaattttccttat 55478110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 19440747 - 19440858
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgac-ttca 114  Q
    |||||||||||||  |||||||||||||||| |||||| |||||||||||||||||||||| |||||||  ||||       ||||||||||||| ||||    
T  19440747 tgaacttttgatgccattgtacaaacggtggagtgttaatcattacatttttgatgttatagtgttaacatcaccaaaaaagtcattctcatgactttca 19440846  T
Q  115 ccatagaatttt 126  Q
    ||||||||||||    
T  19440847 ccatagaatttt 19440858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 19089537 - 19089662
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||| ||||| |||||||| || |       | |    
T  19089537 tgatactatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaagtta 19089636  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    |||| |||||||||||||||||||||    
T  19089637 ttcttatgacttcaccatagaatttt 19089662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 25701141 - 25701266
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| | ||||||||| || |||||||||||| |||| ||||||||||||||||||||||  |||       |||    
T  25701141 tgatactatgaggactgaacttttgatgtcactgtacaaacagtagggtgttactcactacacttttgatgttataatgttaactttaccaaaaaagtca 25701240  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    || |||||||||||||||| ||||||    
T  25701241 ttatcatgacttcaccataaaatttt 25701266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 35021151 - 35021244
Alignment:
Q  33 tgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    ||||||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||       ||||| |||||||||||||||||||||||    
T  35021151 tgtacaaacagtggtgtgttactcactacatttttgatgttataatgttaacttcaccagaaaagtcattttcatgacttcaccatagaatttt 35021244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 17167827 - 17167756
Alignment:
Q  14 aatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||||| ||||||||||| |||||||||||||||  ||||||||||| ||||||||||||||    
T  17167827 aatgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaact 17167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 17173402 - 17173290
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||||||||||| |||||||||||||||  ||||||||||| |||||||||||||| || |       ||||| || | |||||||    
T  17173402 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcac 17173303  T
Q  116 catagaatttttc 128  Q
    |||||||||||||    
T  17173302 catagaatttttc 17173290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 32912679 - 32912789
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||| | ||| ||||||   | ||||||||||||||||||||||||||||||| |||||||| ||||       ||||||| ||||||||||    
T  32912679 tgaacttttgatatcattctacaaatactagggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcac 32912778  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  32912779 catagaatttt 32912789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 37663825 - 37663948
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||  || |||||||| || |       |||    
T  37663825 tgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacagttttaatgt--tagtgttaacttcatcaaaaaagtca 37663922  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    |||| |||||||||||||||||||||    
T  37663923 ttcttatgacttcaccatagaatttt 37663948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 879649 - 879757
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacca 117  Q
    |||||||||||| |||||||||||  || |||||||||||||||||||||||||||||| |||| ||| ||||       | |||||||||||||||||     
T  879649 aacttttgatgtcattgtacaaacaatgaggtgttactcattacatttttgatgttatagtgtttacttcaccaaaaaaattattctcatgacttcacct 879748  T
Q  118 tagaatttt 126  Q
    || ||||||    
T  879749 taaaatttt 879757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 3042723 - 3042613
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||| ||||||||| |||||| |||||||||||| ||||||||||||||||  |||||||| |||||||| ||||       ||||| | |||| |||||    
T  3042723 tgaatttttgatgtcattgtataaacggtggggtattactcattacattttgtatgttatagtgttaacttcaccaaaaaaatcatttttatgatttcac 3042624  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  3042623 catagaatttt 3042613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 39398030 - 39397920
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | |||||||||  ||||||||||||||  ||| |||| |||||||| |||||||| ||||       ||||||| ||||||||||    
T  39398030 tgaacttttgatgtcactgtacaaacaatggggtgttactcacaacacttttaatgttatagtgttaacttcaccataaaagtcattctaatgacttcac 39397931  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  39397930 catagaatttt 39397920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 36493787 - 36493899
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | |||||||||  |||||||||||||| || |||||||||| |||| | |||||| ||||       | ||| ||||||||||||    
T  36493787 tgaacttttgatgtcactgtacaaacaatggggtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagttattttcatgacttcac 36493886  T
Q  116 catagaatttttc 128  Q
    |||||||||||||    
T  36493887 catagaatttttc 36493899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 50697360 - 50697289
Alignment:
Q  10 gagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgtt 81  Q
    ||||| |||||||||||||| |||||||||||||| ||||||||||| ||| |||||| |||||||| ||||    
T  50697360 gagaattgaacttttgatgtcattgtacaaacggtagggtgttactcgttatattttttatgttatagtgtt 50697289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 29584299 - 29584407
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||||||||||| ||| |||||||||||  ||| ||||||||||||| |||||||| ||||       |||||| || ||||||||    
T  29584299 tgaacttttgatgccattgtacaaacagtgaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcac 29584396  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  29584397 catagaatttt 29584407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 47253875 - 47253749
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| | |||| ||||  |||| |||||||||  ||| |||||||| |||| |||||||| ||||       |||    
T  47253875 tgatactatgaggactgaacttttgatgtcactgtataaacaatggg-tgttactcacaacacttttgatgatatagtgttaacttcaccaaaaaagtca 47253777  T
Q  101 ttctcatgacttcaccatagaatttttc 128  Q
    ||||||||||||||||||||||||||||    
T  47253776 ttctcatgacttcaccatagaatttttc 47253749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 4396418 - 4396369
Alignment:
Q  36 acaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  4396418 acaaacggtggggtgttactcattacattttttatgttatagtgttaact 4396369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 7703629 - 7703519
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| |  |||||||| ||||||||||||| |  ||| ||||||||||||| |||||||| ||||       ||||||||||||||| |     
T  7703629 tgaacttttgatgtcaccgtacaaacagtggggtgttactgacaacacttttgatgttatagtgttaacttcaccagaaaagtcattctcatgactttaa 7703530  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  7703529 catagaatttt 7703519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 34948196 - 34948306
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | | ||||||| |||||||||||||||  ||| ||||||||||||| |||||||| | ||       ||||||||||||||||||    
T  34948196 tgaacttttgatgccactttacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcgccagaaaagtcattctcatgacttcac 34948295  T
Q  116 catagaatttt 126  Q
    |||| ||||||    
T  34948296 cataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 9139357 - 9139244
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    ||||||||| |||| | ||||||||||||||||||||||||| |  |||||| ||| ||||| ||||||| ||||       ||| | ||||||||||||    
T  9139357 tgaactttttatgtcactgtacaaacggtggggtgttactcact--attttttatgctataacgttaacttcaccaaaaaagtcaatttcatgacttcac 9139260  T
Q  116 catagaatttttctta 131  Q
    ||||||||||| ||||    
T  9139259 catagaattttcctta 9139244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 54499337 - 54499412
Alignment:
Q  16 tgaacttttgatgtgatt-gtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||||| ||| ||||||||||||||||||||||||  ||| |||||||| |||| |||||||| ||||    
T  54499337 tgaacttttgatgtcattagtacaaacggtggggtgttactcacaacacttttgatgctatagtgttaacttcacc 54499412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 4205221 - 4205118
Alignment:
Q  23 ttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaa 122  Q
    ||||||| ||||||||||| ||||||||||| |||  ||||||||||| ||||| |||||||| || |       ||||| || ||||||||||||||||    
T  4205221 ttgatgtcattgtacaaacagtggggtgttattcagaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaa 4205122  T
Q  123 tttt 126  Q
    ||||    
T  4205121 tttt 4205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 37287846 - 37287735
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc-nnnnnnntcattctcatgacttca 114  Q
    |||||||||||||  | ||||||||| |||||||||||||||  ||| ||||||||||||| ||||||||  |||        |||||||||| ||||||    
T  37287846 tgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaactttaccaaaaaaagtcattctcattacttca 37287747  T
Q  115 ccatagaatttt 126  Q
    ||||||||||||    
T  37287746 ccatagaatttt 37287735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 49376079 - 49375968
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc-nnnnnnntcattctcatgacttca 114  Q
    |||||||||||||  | ||||||| | |||||||||||||||  ||| |||||||| ||||||||||||| ||||        |||||||||||||||||    
T  49376079 tgaacttttgatgccactgtacaagcagtggggtgttactcacgacacttttgatgctataatgttaacttcaccagaaaaagtcattctcatgacttca 49375980  T
Q  115 ccatagaatttt 126  Q
    || |||||||||    
T  49375979 ccgtagaatttt 49375968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 4598104 - 4597995
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | ||||||||| |||||||||||||||  |||  |||||||||||| |||||||| ||||       ||||||| ||||||||||    
T  4598104 tgaacttttgatgccactgtacaaacagtggggtgttactcacaaca-ctttgatgttatagtgttaacttcaccagaaaagtcattctaatgacttcac 4598006  T
Q  116 catagaatttt 126  Q
    |||| ||||||    
T  4598005 cataaaatttt 4597995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 28003085 - 28003195
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||| |||| ||  |||| | |||| |||||||| |||| |||| ||| ||||       ||||||||||||||||||    
T  28003085 tgaacttttgatgtcactgtacaaacagtggagtactactgactacacttttgatgctatagtgttgacttcaccagaaaagtcattctcatgacttcac 28003184  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  28003185 catagaatttt 28003195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 38011966 - 38011856
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  |  |||||||| |||||||| || ||| |||| ||||||||||||| |||| ||| ||||       |||||||||||| |||||    
T  38011966 tgaacttttgatggcaccgtacaaacagtggggtgctattcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgatttcac 38011867  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  38011866 catagaatttt 38011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 42199841 - 42199731
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    ||||||||| |||| ||| ||||||   |||||| |||||||||||||||||||||||||| | |||||| ||||       ||||||| |||| |||||    
T  42199841 tgaactttttatgtcattctacaaataatggggtattactcattacatttttgatgttatagtattaacttcaccaaaaaaatcattcttatgatttcac 42199742  T
Q  116 catagaatttt 126  Q
    |||||| ||||    
T  42199741 catagattttt 42199731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 6864162 - 6864038
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | || ||||||||||  ||||||||||  || || ||||| |||||| ||||||||||||||| || ||||| ||||       |||    
T  6864162 tgatactatgaggactggacttttgatgctattgtacaaaaagttggatgttattcattaaatttttgatgttatagtgataacttcaccaaaaaagtca 6864063  T
Q  101 ttctcatgacttcaccatagaattt 125  Q
    |||||||||| |||||||| |||||    
T  6864062 ttctcatgacatcaccatacaattt 6864038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 53124372 - 53124325
Alignment:
Q  43 gtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  53124372 gtggggtgttactcattatatttttgatgttatagtgttaacttcacc 53124325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 23761184 - 23761115
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||| | | ||||||| ||| |||||||||||  ||| ||||||||||||| ||||||||    
T  23761184 tgaacttttgatgtcactatacaaacagtgaggtgttactcacaacacttttgatgttatagtgttaact 23761115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 30002723 - 30002833
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||| ||| |||||||||||  ||| |||||||| || | |||||||| ||||       ||||| | ||||||||||    
T  30002723 tgaacttttgatgtcactgtacaaacagtgaggtgttactcacaacacttttgatgctacagtgttaacttcaccagaaaaatcattttaatgacttcac 30002822  T
Q  116 catagaatttt 126  Q
    |||||| ||||    
T  30002823 catagagtttt 30002833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 35025687 - 35025797
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| |  ||| |||| |||||||| |||||| |||| |||||||| |||| |||| ||| ||||       ||||| |||||||||||     
T  35025687 tgaacttttgatgtcaacgtataaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcattttcatgacttcag 35025786  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  35025787 catagaatttt 35025797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 50764857 - 50764784
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgtta 74  Q
    |||||| ||||| | |||||||||||||| |  |||||||| |||||||||||||||  ||| |||||||||||    
T  50764857 tgatactatgaggattgaacttttgatgtcaccgtacaaacagtggggtgttactcacaacacttttgatgtta 50764784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 55241203 - 55241313
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | ||||||||| ||||||||||||||   ||| |||||||  |||| | |||||| |||        ||||||||||||||||||    
T  55241203 tgaacttttgatgccactgtacaaacagtggggtgttactcgcaacaattttgataatatagtattaacttcactagaaaagtcattctcatgacttcac 55241302  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  55241303 catagaatttt 55241313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 37775780 - 37775671
Alignment:
Q  17 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacc 116  Q
    ||||||||||||  | ||||||||| |||||||||||||||  |||||||| || ||||| || ||||| ||||       ||||| | |||||||||||    
T  37775780 gaacttttgatgccactgtacaaacagtggggtgttactcacaacatttttaatattatagtgctaacttcaccaaaaaaatcattttaatgacttcacc 37775681  T
Q  117 atagaatttt 126  Q
     |||||||||    
T  37775680 gtagaatttt 37775671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 127
Target Start/End: Original strand, 20097509 - 20097538
Alignment:
Q  98 tcattctcatgacttcaccatagaattttt 127  Q
    ||||||||||||||||||||||||||||||    
T  20097509 tcattctcatgacttcaccatagaattttt 20097538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 131
Target Start/End: Original strand, 38812278 - 38812311
Alignment:
Q  98 tcattctcatgacttcaccatagaatttttctta 131  Q
    ||||||||||||||||||||||||||||| ||||    
T  38812278 tcattctcatgacttcaccatagaattttcctta 38812311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Complemental strand, 38811843 - 38811815
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  38811843 tcattctcatgacttcaccatagaatttt 38811815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 8e-27; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 18422759 - 18422649
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||       ||||| | ||||||||||    
T  18422759 tgaacttttgatgtcattgtacaaacggtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcac 18422660  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  18422659 catagaatttt 18422649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 32267142 - 32267032
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||        ||||||| ||||||||||    
T  32267142 tgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatattgttaacttcacaaaaaaagtcattcttatgacttcac 32267043  T
Q  116 catagaatttt 126  Q
    |||| ||||||    
T  32267042 cataaaatttt 32267032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 10922850 - 10922725
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||| ||||       |||    
T  10922850 tgatactatgaggattgaacttttgatgtcattgtacaaacagtggggtcttactcattacattttttatgttatagtgttaacttcaccaaaaaaatca 10922751  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    ||||||||| ||||||||| ||||||    
T  10922750 ttctcatgatttcaccataaaatttt 10922725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 15752152 - 15752025
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||  ||||||||||| ||| ||||||||||| || |||||| |||||||| |||||||| ||||       |||    
T  15752152 tgatactatgaggactgaacttttgatgccattgtacaaacagtgaggtgttactcactatattttttatgttatagtgttaacttcaccaaaaaagtca 15752053  T
Q  101 ttctcatgacttcaccatagaatttttc 128  Q
    ||||||||||||||||||||||||||||    
T  15752052 ttctcatgacttcaccatagaatttttc 15752025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 15383041 - 15382931
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||| |||||| | ||||       ||||| | || |||||||    
T  15383041 tgaacttttgatgacattgtacaaacggtgggatgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcatttttataacttcac 15382942  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  15382941 catagaatttt 15382931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 37451394 - 37451325
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| ||||||||    
T  37451394 tgaacttttgatgtcattgtacaaacggtagggtgttacttattacatttttgatgttatagtgttaact 37451325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 126
Target Start/End: Original strand, 37618949 - 37619074
Alignment:
Q  3 ataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtg--ttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||| ||||||| |||||||||||||| ||| ||||||| ||||||||  |||||||||| ||||||||||||||| |||||||| ||||       |||    
T  37618949 atactatgagaactgaacttttgatgtcattttacaaacagtggggtgttttactcattaaatttttgatgttatagtgttaacttcaccaaaaaagtca 37619048  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    |||| || ||||||||||||||||||    
T  37619049 ttcttataacttcaccatagaatttt 37619074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 51128967 - 51128898
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  51128967 tgaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaact 51128898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 1547410 - 1547285
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||||| |||||||||||||  | || |||||| |||| ||||||||||  |||||||| |||||||| |||||||| ||||       |||    
T  1547410 tgatactatgagaactgaacttttgatgccactgcacaaacagtggagtgttactcacaacattttttatgttatagtgttaacttcaccagaaaagtca 1547311  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    ||||||||||||||||||||||||||    
T  1547310 ttctcatgacttcaccatagaatttt 1547285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28564834 - 28564918
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||| ||||| | |||||||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||| ||||||||    
T  28564834 tgatactatgaggactgaacttttgatgtcattgtacaaacagtaaggtgttactcattacatttttgatgttatagtgttaact 28564918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 19899837 - 19899947
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||| ||||||| ||| |||||||||| ||||||||||||||||||| |||||||| ||||       ||||| | ||||||||||    
T  19899837 tgaacttttgatgccattctacaaacagtgaggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcattattatgacttcac 19899936  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  19899937 catagaatttt 19899947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 8222251 - 8222124
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||||| |||||||||||||  ||||||   |||||| |||||||||||||||||||||||||||||| |||||||| |||        |||    
T  8222251 tgatactatgagaactgaacttttgatgccattgta---acggtgtggtgttactcattacatttttgatgttatagtgttaacttcactaaaaaggtca 8222155  T
Q  101 ttctcatgacttcaccatagaatttttctta 131  Q
    || | ||||||||||| ||||||||| ||||    
T  8222154 tttttatgacttcaccgtagaattttcctta 8222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 30327020 - 30327087
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaa 83  Q
    |||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  30327020 tgaacttttgatgctattgtacaaacggttgggtattactcattacatttttgatgttatagtgttaa 30327087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 2959856 - 2959746
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||| ||||| ||||||| | |||| ||||||||||||| |||||||| || |       ||||| ||||||||||||    
T  2959856 tgaacttttgatgtcactgtacaaacagtgggatgttacttactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttcac 2959757  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  2959756 catagaatttt 2959746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 30254531 - 30254422
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||||||||||| ||| | | |||||||||||||||||||||||||| |||||||| || |       ||||||| || |||||||    
T  30254531 tgaacttttgatgtcattgtacaaacagtgtg-tattactcattacatttttgatgttatattgttaacttcaacaaaaaagtcattcttataacttcac 30254433  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  30254432 catagaatttt 30254422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 28769759 - 28769649
Alignment:
Q  17 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacc 116  Q
    |||| |||||||  ||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| |||        | ||| | |||||||||||    
T  28769759 gaacctttgatgccattgtacaaacggtggg-tgttactcattacatttttgatgtcatagtgttaacttcacaaaaaaagttatttttatgacttcacc 28769661  T
Q  117 atagaatttttc 128  Q
    ||||||||||||    
T  28769660 atagaatttttc 28769649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 32216163 - 32216089
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    ||||||||||| |  ||||||||||| |||| |||||||||| |||||||||||||||||| |||||||| ||||    
T  32216163 tgaacttttgacgccattgtacaaacagtggtgtgttactcactacatttttgatgttatagtgttaacttcacc 32216089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 9903122 - 9903191
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||| | ||||||||| | ||||||||||||| |||| ||||||||||||| ||||||||    
T  9903122 tgaacttttgatgtcactgtacaaacagcggggtgttactcactacagttttgatgttatagtgttaact 9903191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 23999455 - 23999345
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||| ||||||  |||||||||||||| ||| |||||| ||||| || |||||||| ||||       ||||||| ||||||||||    
T  23999455 tgaacttttgatgtcattctacaaatagtggggtgttactcgttatattttttatgttgtagtgttaacttcaccaaaaaaatcattcttatgacttcac 23999356  T
Q  116 catagaatttt 126  Q
    |||| ||||||    
T  23999355 cataaaatttt 23999345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 42721147 - 42721037
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||| ||||||||||||||| || |||||| ||| ||||  | ||||| ||||       ||||| ||||||||||||    
T  42721147 tgaacttttgatgttactgtacaaacagtggggtgttactcactatattttttatgatatagggctaacttcaccaaaaaaatcattttcatgacttcac 42721048  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  42721047 catagaatttt 42721037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 48620745 - 48620676
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||| | ||||||||| |||||||||||||||  ||| ||||||||||||| ||||||||    
T  48620745 tgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgttatattgttaact 48620676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 47279312 - 47279196
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||| ||||  | ||||||||| |||||||||||||||  ||| |||||||  ||||||||||||| ||||       |||    
T  47279312 tgatactatgaggactgaactttcgatgccactgtacaaacagtggggtgttactcacaacacttttgatagtataatgttaacttcaccaaaaaaatca 47279213  T
Q  101 ttctcatgacttcacca 117  Q
    |||||||||||||||||    
T  47279212 ttctcatgacttcacca 47279196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 27763382 - 27763447
Alignment:
Q  19 acttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    ||||||||||| ||| |||||||  |||| |||||||||||||||||||||||||||| ||||||||    
T  27763382 acttttgatgtcattctacaaactatggg-tgttactcattacatttttgatgttatagtgttaact 27763447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 46931500 - 46931450
Alignment:
Q  35 tacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    ||||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  46931500 tacaaacagtggggtattactcattacatttttgatgttatagtgttaact 46931450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 34012445 - 34012555
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | | ||||||| |||| |||||||||| |||| | ||||||||||| |||||||| || |       ||||| ||||||||||||    
T  34012445 tgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcataaacgtcattttcatgacttcac 34012544  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  34012545 catagaatttt 34012555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 38823322 - 38823212
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | ||||||||  ||||||||||||||   ||| |||||||| |||| ||||||||  |||       ||||||||||||||||||    
T  38823322 tgaacttttgatgacactgtacaaatagtggggtgttactcgcaacaattttgatgctatagtgttaacttaaccagaaaagtcattctcatgacttcac 38823223  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  38823222 catagaatttt 38823212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 10182062 - 10182186
Alignment:
Q  2 gataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcat 101  Q
    ||||| ||||| | |||||||||||||  | ||||||||| |||| ||||||| || || |||||| |||||| | | |||||| ||||       ||||    
T  10182062 gatactatgaggactgaacttttgatgccactgtacaaacagtggcgtgttacgcactatattttttatgttacagttttaacttcaccaaaaaagtcat 10182161  T
Q  102 tctcatgacttcaccatagaatttt 126  Q
    | |||||||||||||||||||||||    
T  10182162 tttcatgacttcaccatagaatttt 10182186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 16415723 - 16415643
Alignment:
Q  46 gggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||| |||| |||||||| |||| |||||||| ||||       ||||||||||||||||||| |||||||||    
T  16415723 gggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccttagaatttt 16415643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 30254950 - 30254856
Alignment:
Q  31 attgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    ||||||||||| ||||| |||||  ||||||||||||||||||||| |||||||| || |       ||||| | |||||||||||||||||||||    
T  30254950 attgtacaaacagtggg-tgttatccattacatttttgatgttatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaatttt 30254856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 11742418 - 11742528
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||| ||||||||||||| |  ||| |||||||  |||| |||||||| ||||       |||||||||| |||||||    
T  11742418 tgaacttttgatgtcactgtacaaacagtggggtgttacttacaacacttttgataatatagtgttaacttcaccagaaaagtcattctcataacttcac 11742517  T
Q  116 catagaatttt 126  Q
     ||| ||||||    
T  11742518 gataaaatttt 11742528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 21289780 - 21289729
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacattttt 67  Q
    |||||||||||||  | ||||||||| ||||||||||||||| |||||||||    
T  21289780 tgaacttttgatgccactgtacaaacagtggggtgttactcactacattttt 21289729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 3535040 - 3534971
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||| | || |||||| ||  |||||||||||  ||| ||||||||||||| ||||||||    
T  3535040 tgaacttttgatgtcactgcacaaacagtaaggtgttactcacaacacttttgatgttatagtgttaact 3534971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 14758149 - 14758039
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  |  |||||||| || | ||| |||||| |||| ||||||||||||| |||| ||| ||||       ||||||||||||||||||    
T  14758149 tgaacttttgatgccaccgtacaaacagttgtgtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgacttcac 14758050  T
Q  116 catagaatttt 126  Q
    | || ||||||    
T  14758049 cgtaaaatttt 14758039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 27563973 - 27564042
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||||| | | ||||||| |||| |||||||||| || |||||| | |||||| ||||||||    
T  27563973 tgaacttttgatgtcactatacaaacagtggagtgttactcactatatttttaaagttatagtgttaact 27564042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 27227627 - 27227655
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  27227627 tcattctcatgacttcaccatagaatttt 27227655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Complemental strand, 43579272 - 43579244
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  43579272 tcattctcatgacttcaccatagaatttt 43579244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 33551078 - 33551187
Alignment:
Q  17 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacc 116  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| |||        |||||||||||||||||||    
T  33551078 gaacttttgatgtcattgtacaaacagtggggtgttactcactacatttttgatgttatagtgttaacttcactaaaaaagtcattctcatgacttcacc 33551177  T
Q  117 atagaatttt 126  Q
     |||||||||    
T  33551178 gtagaatttt 33551187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 37905835 - 37905746
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||| ||||| | |||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||| |||||||| ||||    
T  37905835 tgatactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttacattttttatgttatagtgttaacttcacc 37905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 13711591 - 13711466
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||||||| | | | |||||||||||| | ||||||||| |||||||||||||||  ||| |||||||| ||||||||||||| ||||       |||    
T  13711591 tgataccatgtggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgctataatgttaacttcaccagaaaagtca 13711492  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    |||| |||||||||||||||||||||    
T  13711491 ttctgatgacttcaccatagaatttt 13711466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 43648336 - 43648410
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  43648336 tgaacttttgatgtcattatacaaacagtgaggtgttactcattacatttttgatgttatagtgttaacttcacc 43648410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 19289407 - 19289483
Alignment:
Q  9 tgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||| | |||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||||| ||||||||    
T  19289407 tgagaacttaacttttgatgtcattgtacaaacaatggggtgttactcattatatttttgatgttatagtgttaact 19289483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 4167034 - 4166918
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  ||||||||||| |||||||||||||||  | |||||||||  ||||||||||||| ||||       ||||| || |||||||||    
T  4167034 tgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatactataatgttaacttcaccagaaaagtcattttcgtgacttcac 4166935  T
Q  116 catagaatttttcttat 132  Q
    ||||||||||| |||||    
T  4166934 catagaattttccttat 4166918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 26357694 - 26357579
Alignment:
Q  11 agaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgac 110  Q
    |||| |||||||||||||| | ||||||||| ||||| ||||||||| |||| ||||||||||||| |||||||| || |       ||||| |||||||    
T  26357694 agaactgaacttttgatgtcactgtacaaacagtgggatgttactcactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgac 26357595  T
Q  111 ttcaccatagaatttt 126  Q
    ||||||||| ||||||    
T  26357594 ttcaccataaaatttt 26357579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 11366472 - 11366582
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||| ||||||  ||| | |||||||||||||||||||||||||||| |||||| | ||||       ||||||| |||| |||||    
T  11366472 tgaacttttgatgtcattatacaaatagtgagatgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcattcttatgatttcac 11366571  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  11366572 catagaatttt 11366582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 36642113 - 36641983
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| | ||||||||| ||| ||||||||||   ||| |||||||| |||| | |||| | ||||       |||    
T  36642113 tgatactatgaggactgaacttttgatgtcactgtacaaacagtgaggtgttactcgcaacacttttgatgctatagtattaatttcaccagaaaagtca 36642014  T
Q  101 ttctcatgacttcaccatagaatttttctta 131  Q
    |||||||||||||||||||||||||||||||    
T  36642013 ttctcatgacttcaccatagaatttttctta 36641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 2325446 - 2325571
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||  | |||||||||  |||||||||||||| ||||||| |||||||||| |||||||| |||        |||    
T  2325446 tgatactatgaggactgaacttttgatgccagtgtacaaacaatggggtgttactcaatacatttatgatgttatattgttaacttcacgagaaaagtca 2325545  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    ||| ||| ||||||||||||||||||    
T  2325546 ttcacataacttcaccatagaatttt 2325571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 41463926 - 41464054
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||  | ||||||||| ||| |||||||||||  ||| ||||||| ||||| | |||||| ||||       |||    
T  41463926 tgatactatgaggattgaacttttgatgccactgtacaaacagtgaggtgttactcacaacacttttgattttatagtattaacttcaccaaaaatgtca 41464025  T
Q  101 ttctcatgacttcaccatagaatttttct 129  Q
    |||||| ||||||||||||||||||||||    
T  41464026 ttctcacgacttcaccatagaatttttct 41464054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 17054190 - 17054297
Alignment:
Q  19 acttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccat 118  Q
    ||||||||||| |||||||||||  || | ||||||| | |||||||||||||||||| | |||||| ||||       |||||| ||||||||||||||    
T  17054190 acttttgatgtcattgtacaaacaatgagatgttacttactacatttttgatgttatagtattaacttcaccaaaaaagtcattcgcatgacttcaccat 17054289  T
Q  119 agaatttt 126  Q
    ||||||||    
T  17054290 agaatttt 17054297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 43770930 - 43771041
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | |||| |||| |||||||||||||||  ||| ||||||||||||| |||||||| ||||       ||||||| ||||||||||    
T  43770930 tgaacttttgatgccactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcacc-aaaaaatcattctaatgacttcac 43771028  T
Q  116 catagaatttttc 128  Q
    |||||||||||||    
T  43771029 catagaatttttc 43771041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 35959021 - 35958911
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    ||||||||| |||| ||||||||||| |||||||||| |||||||||||||| |||||||| ||  |||| ||||       ||||| | |||||||||     
T  35959021 tgaacttttaatgtcattgtacaaacagtggggtgttgctcattacattttttatgttatagtggcaacttcaccaaaaaagtcatttttatgacttcat 35958922  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  35958921 catagaatttt 35958911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 17071829 - 17071938
Alignment:
Q  17 gaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcacc 116  Q
    ||||||||||||| ||||||||||   || | ||||||| | |||||||||| ||||||| |||||||| ||||       |||||| ||||||||||||    
T  17071829 gaacttttgatgtcattgtacaaataatgagatgttacttactacatttttgttgttatagtgttaacttcaccaaaaaagtcattcgcatgacttcacc 17071928  T
Q  117 atagaatttt 126  Q
    ||||||||||    
T  17071929 atagaatttt 17071938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 3177066 - 3176938
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||| ||||||||||| || | ||||||||||  ||||||||||| ||||| | |||||| || |       |||    
T  3177066 tgatactatgaggactgaacttttgatgtcattgtacaaacagttgcgtgttactcaaaacatttttgatattatagtattaacttcatcagaaaagtca 3176967  T
Q  101 ttctcatgacttcaccatagaatttttct 129  Q
    || || | |||||||||||||||||||||    
T  3176966 ttttcgtaacttcaccatagaatttttct 3176938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 27350029 - 27350103
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||||| | ||||||||| ||| |||||||||||  |||||||||||| |||| |||||||| ||||    
T  27350029 tgaacttttgatgtcactgtacaaacagtgtggtgttactcacaacatttttgatgctatagtgttaacttcacc 27350103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 4264168 - 4264278
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | ||||||||| ||||| |||||||||  ||| |||||||| |||| ||||||||  |||       ||||| | ||||||||||    
T  4264168 tgaacttttgatgtcactgtacaaacagtgggatgttactcacaacacttttgatgctatagtgttaactttaccagaaaagtcattatgatgacttcac 4264267  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  4264268 catagaatttt 4264278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 19313964 - 19313854
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| | |||| |||  ||  |||||||||||  ||| |||||||| ||||||||||||| ||||       ||||||| ||||||||||    
T  19313964 tgaacttttgatgtcactgtataaatagtaaggtgttactcacaacacttttgatgctataatgttaacttcaccagaaaagtcattctaatgacttcac 19313865  T
Q  116 catagaatttt 126  Q
    |||||||||||    
T  19313864 catagaatttt 19313854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 33660459 - 33660571
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||  | ||||||||| || ||||||||||||  ||| ||||||||||||| ||||||||  ||        ||||| | ||||||||||    
T  33660459 tgaacttttgatgccactgtacaaacagttgggtgttactcacaacacttttgatgttatagtgttaacttaactagaaaagtcattttaatgacttcac 33660558  T
Q  116 catagaatttttc 128  Q
    |||||||||||||    
T  33660559 catagaatttttc 33660571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 4763756 - 4763678
Alignment:
Q  3 ataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgtt 81  Q
    |||| ||| ||| |||||||||||||| | ||||||||| ||||||||||||||| |||| ||||| || |||| ||||    
T  4763756 atactatgggaactgaacttttgatgtcactgtacaaacagtggggtgttactcactacagttttgttgatatagtgtt 4763678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 33902178 - 33902120
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgtta 74  Q
    |||||||||||||| ||| ||||||| ||||||| ||||||| ||||||||| ||||||    
T  33902178 tgaacttttgatgtcattttacaaacagtggggtattactcactacattttttatgtta 33902120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 39167439 - 39167495
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactca 57  Q
    |||||| ||||| | |||||||||||||| ||||||||||| ||| |||||||||||    
T  39167439 tgatactatgaggactgaacttttgatgtcattgtacaaacagtgaggtgttactca 39167495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 41465591 - 41465511
Alignment:
Q  46 gggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    ||||| |||||| ||||  ||||||| |||| |||||||| ||||       |||||||||||||||||||||||||||||    
T  41465591 gggtgctactcactacacctttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 41465511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 18494386 - 18494469
Alignment:
Q  43 gtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||  ||| |||||||| |||| |||||||| ||||       ||||| |||||||||||||| ||||||||    
T  18494386 gtggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattttcatgacttcaccacagaatttt 18494469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 33709323 - 33709397
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||||||||||| | ||||| ||| |||| |||||||||   ||| ||||||||||||| |||||||| ||||    
T  33709323 tgaacttttgatgtcactgtactaacagtggagtgttactcgcaacacttttgatgttatagtgttaacttcacc 33709397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4478496 - 4478407
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacacc 90  Q
    |||||| ||||| | | |||||||||||  | |||||||||  ||| ||||||||||  ||| ||||||||||||| |||||||| ||||    
T  4478496 tgatactatgaggactaaacttttgatgccactgtacaaacaatggagtgttactcacaacacttttgatgttatagtgttaacttcacc 4478407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 7007063 - 7007091
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  7007063 tcattctcatgacttcaccatagaatttt 7007091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 43446480 - 43446508
Alignment:
Q  98 tcattctcatgacttcaccatagaatttt 126  Q
    |||||||||||||||||||||||||||||    
T  43446480 tcattctcatgacttcaccatagaatttt 43446508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 146089 - 146201
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcac 115  Q
    |||||||||||||| ||| ||||||   |||||||||||||||||||||||| |||||||||||||||||  |||       ||||||| ||||||||||    
T  146089 tgaacttttgatgtcattctacaaataatggggtgttactcattacattttttatgttataatgttaacttaaccaaaaaaatcattcttatgacttcac 146188  T
Q  116 catagaatttttc 128  Q
    | |||||||||||    
T  146189 cgtagaatttttc 146201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 94458 - 94525
Alignment:
Q  18 aacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaact 85  Q
    |||||||||||  | ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  94458 aacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttataatgttaact 94525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 408501 - 408559
Alignment:
Q  16 tgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgtta 74  Q
    |||||||||||| | ||| ||||||||||  ||||||||||||||||||||||||||||    
T  408501 tgaacttttgatttcattttacaaacggtaaggtgttactcattacatttttgatgtta 408559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 261 - 136
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | |||||||||||||  ||||||||||| |||| ||||||||||  |||||||| ||  || | |||||||| ||||       |||    
T  261 tgatactatgaggactgaacttttgatgccattgtacaaacagtggagtgttactcacaacattttttatactacagtgttaacttcaccagaaaagtca 162  T
Q  101 ttctcatgacttcaccatagaatttt 126  Q
    || || ||||||||||||||||||||    
T  161 ttttcgtgacttcaccatagaatttt 136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 44084 - 43957
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | ||||||||| |||  |||||||||||   |||||||||||||||||||||||||| |||||  ||||||| ||||       ||     
T  44084 tgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtct 43985  T
Q  101 ttctcatgacttcaccatagaatttttc 128  Q
    |||| | |||||||||||||||||||||    
T  43984 ttcttacgacttcaccatagaatttttc 43957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 154703 - 154830
Alignment:
Q  1 tgataccatgagaaatgaacttttgatgtgattgtacaaacggtggggtgttactcattacatttttgatgttataatgttaactacaccnnnnnnntca 100  Q
    |||||| ||||| | ||||||||| |||  |||||||||||   |||||||||||||||||||||||||| |||||  ||||||| ||||       ||     
T  154703 tgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtct 154802  T
Q  101 ttctcatgacttcaccatagaatttttc 128  Q
    |||| | |||||||||||||||||||||    
T  154803 ttcttacgacttcaccatagaatttttc 154830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 100886 - 100823
Alignment:
Q  63 tttttgatgttataatgttaactacaccnnnnnnntcattctcatgacttcaccatagaatttt 126  Q
    ||||||||||||||  ||||||| ||||       |||||||||||||||||||||||||||||    
T  100886 tttttgatgttatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaatttt 100823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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