View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19639_low_7 (Length: 248)
Name: NF19639_low_7
Description: NF19639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19639_low_7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 47533486 - 47533257
Alignment:
| Q |
19 |
gtgcatgctcaaagagaaaaagttgctacatagtttttgggtgaaaaagttgctacgtatatatatcaaaacaaacacctgactatgtttccacacagtt |
118 |
Q |
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| T |
47533486 |
gtgcatgctcaaagagaaaaagttgctacatagtttttgggtgaaaaagttgctacgtatatatatcaaaacaaacacctgactatgttcccacacagtt |
47533387 |
T |
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| Q |
119 |
ggtagtttgggtccgggggattctcggttgcgaagaaaagaagctcttattggaaaataaattaatgcagatcaatttactccatgagcagaagaagcct |
218 |
Q |
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| T |
47533386 |
ggtagtttgggtccaggggattctcggttgcgaagaaaagaagctcttattggaaaataaattaatgcagatcagtttactccatgagcagaagtagctt |
47533287 |
T |
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| Q |
219 |
aactgttgaaccacaaatactaacagaccc |
248 |
Q |
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| T |
47533286 |
aactgttgaaccacaaatactaacagaccc |
47533257 |
T |
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