View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19639_low_9 (Length: 229)
Name: NF19639_low_9
Description: NF19639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19639_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 4 - 224
Target Start/End: Complemental strand, 48763983 - 48763763
Alignment:
| Q |
4 |
tcatcaaatgatcggtgttagccaagtttaaatcactgaaataatactccacctaaaaaatcccaaccaaaaccctagtcaagttgtagagatgcaattt |
103 |
Q |
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| T |
48763983 |
tcatcaaatgatcggtggtagccaagtttaaatcgctgaaataatactccacctaaaaaatcccaaccaaaaccctagtcaagttgtagagatgcaattt |
48763884 |
T |
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| Q |
104 |
agagagatatgatcaacacgaatagatacataacaatataataatatgaatgaacaattggaacatggaatgaagatgaaattaggcaagttggttgacc |
203 |
Q |
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| T |
48763883 |
agagagatatgatcaacacgaatagatacataacaatataataatatgaatgaacaattggaacatggaatgaagatgaaattaggcaagttggttgacc |
48763784 |
T |
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| Q |
204 |
tgtttcaaaattttgtgatga |
224 |
Q |
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| T |
48763783 |
tgtttcaaaattttgtgatga |
48763763 |
T |
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