View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19642_high_5 (Length: 498)

Name: NF19642_high_5
Description: NF19642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19642_high_5
NF19642_high_5
[»] chr4 (86 HSPs)
chr4 (284-484)||(33332501-33332703)
chr4 (301-484)||(36194701-36194885)
chr4 (301-484)||(52944307-52944488)
chr4 (306-484)||(18935779-18935959)
chr4 (301-484)||(51888143-51888324)
chr4 (284-484)||(27651917-27652120)
chr4 (284-484)||(31891219-31891423)
chr4 (284-484)||(22300826-22301026)
chr4 (301-481)||(9643384-9643562)
chr4 (307-482)||(22038736-22038909)
chr4 (301-484)||(1621441-1621618)
chr4 (284-484)||(36204311-36204517)
chr4 (285-484)||(17949256-17949452)
chr4 (285-484)||(17953108-17953304)
chr4 (333-481)||(47158251-47158400)
chr4 (313-484)||(9048672-9048841)
chr4 (308-443)||(9713915-9714048)
chr4 (301-444)||(28857398-28857539)
chr4 (307-484)||(36161713-36161888)
chr4 (301-484)||(54021859-54022037)
chr4 (18-78)||(33332898-33332958)
chr4 (326-484)||(2069512-2069668)
chr4 (334-484)||(21662466-21662614)
chr4 (334-484)||(21671230-21671378)
chr4 (301-448)||(18048879-18049024)
chr4 (156-259)||(33332756-33332860)
chr4 (394-484)||(47320344-47320434)
chr4 (285-484)||(21686174-21686369)
chr4 (285-444)||(22611164-22611320)
chr4 (285-445)||(4142723-4142883)
chr4 (307-484)||(31359678-31359854)
chr4 (301-484)||(10496334-10496512)
chr4 (285-444)||(13634096-13634252)
chr4 (285-444)||(32766495-32766651)
chr4 (285-484)||(35348288-35348484)
chr4 (332-484)||(37465510-37465659)
chr4 (378-484)||(2520850-2520956)
chr4 (301-484)||(8670484-8670662)
chr4 (307-443)||(48351159-48351291)
chr4 (301-444)||(53811027-53811165)
chr4 (362-484)||(56040578-56040700)
chr4 (284-444)||(6155198-6155357)
chr4 (361-425)||(52060914-52060978)
chr4 (301-443)||(52933916-52934057)
chr4 (285-443)||(56156615-56156770)
chr4 (338-484)||(12199625-12199769)
chr4 (359-484)||(10258828-10258953)
chr4 (285-444)||(26633643-26633799)
chr4 (336-444)||(38166202-38166307)
chr4 (308-484)||(55227981-55228155)
chr4 (360-444)||(19853484-19853568)
chr4 (286-444)||(24099039-24099194)
chr4 (301-396)||(35395690-35395783)
chr4 (327-432)||(4937855-4937958)
chr4 (383-448)||(37030337-37030402)
chr4 (285-484)||(33921032-33921231)
chr4 (413-484)||(43853549-43853620)
chr4 (307-394)||(7393272-7393358)
chr4 (359-484)||(53444170-53444295)
chr4 (223-259)||(9713827-9713863)
chr4 (408-444)||(35964929-35964965)
chr4 (408-484)||(36700377-36700453)
chr4 (408-484)||(45418613-45418689)
chr4 (311-389)||(4643876-4643952)
chr4 (224-263)||(4937752-4937791)
chr4 (337-443)||(9178385-9178489)
chr4 (360-439)||(26090891-26090970)
chr4 (218-263)||(28857292-28857338)
chr4 (311-388)||(29965653-29965728)
chr4 (308-483)||(43095634-43095804)
chr4 (311-391)||(868180-868258)
chr4 (218-259)||(43444325-43444366)
chr4 (285-484)||(43510178-43510373)
chr4 (408-484)||(44596763-44596837)
chr4 (309-385)||(46991129-46991203)
chr4 (218-259)||(47158142-47158183)
chr4 (311-391)||(53616643-53616721)
chr4 (309-357)||(18138938-18138986)
chr4 (408-484)||(21554722-21554798)
chr4 (408-444)||(37188549-37188585)
chr4 (301-357)||(42032578-42032634)
chr4 (284-345)||(43353595-43353658)
chr4 (408-444)||(44947511-44947547)
chr4 (308-356)||(47320449-47320497)
chr4 (309-357)||(49126151-49126199)
chr4 (408-444)||(49410322-49410358)
[»] chr5 (54 HSPs)
chr5 (284-484)||(14211179-14211383)
chr5 (301-484)||(28540838-28541023)
chr5 (284-484)||(2979238-2979442)
chr5 (308-484)||(8088144-8088317)
chr5 (284-484)||(19103399-19103603)
chr5 (285-484)||(38597757-38597953)
chr5 (379-484)||(39567321-39567426)
chr5 (360-484)||(10722793-10722917)
chr5 (313-444)||(35920968-35921097)
chr5 (285-484)||(14726393-14726589)
chr5 (360-484)||(41630534-41630658)
chr5 (285-484)||(13007189-13007385)
chr5 (359-484)||(26878040-26878165)
chr5 (285-484)||(31391685-31391881)
chr5 (306-484)||(10332479-10332656)
chr5 (301-444)||(24229756-24229894)
chr5 (301-424)||(37986105-37986223)
chr5 (285-484)||(7036179-7036375)
chr5 (359-484)||(34945424-34945549)
chr5 (285-444)||(9113697-9113853)
chr5 (301-444)||(7930155-7930293)
chr5 (305-460)||(11073856-11074006)
chr5 (362-484)||(13421967-13422089)
chr5 (308-442)||(25980143-25980272)
chr5 (377-442)||(32691019-32691084)
chr5 (301-444)||(6012110-6012248)
chr5 (378-484)||(6216948-6217054)
chr5 (359-484)||(35850830-35850955)
chr5 (359-484)||(38007389-38007514)
chr5 (335-430)||(41749335-41749428)
chr5 (224-259)||(10332705-10332740)
chr5 (301-443)||(19120888-19121027)
chr5 (307-424)||(38110940-38111055)
chr5 (319-444)||(8984927-8985046)
chr5 (285-484)||(11976867-11977063)
chr5 (363-444)||(15571521-15571602)
chr5 (311-391)||(28235593-28235671)
chr5 (408-444)||(7150289-7150325)
chr5 (307-434)||(16758521-16758646)
chr5 (408-444)||(19280899-19280935)
chr5 (408-447)||(19259763-19259802)
chr5 (301-445)||(26825408-26825547)
chr5 (408-442)||(4954081-4954115)
chr5 (363-444)||(1409533-1409614)
chr5 (301-358)||(1582147-1582204)
chr5 (301-358)||(1602611-1602668)
chr5 (309-389)||(7613053-7613131)
chr5 (311-391)||(34881726-34881804)
chr5 (301-350)||(39567273-39567322)
chr5 (221-249)||(2979476-2979504)
chr5 (408-444)||(21060237-21060273)
chr5 (408-444)||(34881807-34881843)
chr5 (408-444)||(41184394-41184430)
chr5 (408-444)||(42579977-42580013)
[»] chr2 (90 HSPs)
chr2 (284-484)||(10237149-10237353)
chr2 (284-484)||(3308908-3309112)
chr2 (285-474)||(32448562-32448750)
chr2 (325-484)||(14955535-14955696)
chr2 (306-439)||(6358849-6358982)
chr2 (284-484)||(10929631-10929832)
chr2 (301-484)||(29574561-29574742)
chr2 (308-484)||(17249080-17249253)
chr2 (308-484)||(23933552-23933726)
chr2 (358-484)||(24461484-24461610)
chr2 (307-440)||(37416702-37416833)
chr2 (286-484)||(31210540-31210735)
chr2 (319-484)||(14423329-14423492)
chr2 (359-449)||(30400003-30400093)
chr2 (308-439)||(28533932-28534061)
chr2 (304-484)||(4904078-4904253)
chr2 (337-444)||(17151445-17151550)
chr2 (358-484)||(16375980-16376106)
chr2 (305-484)||(25509001-25509175)
chr2 (337-442)||(28871763-28871866)
chr2 (284-484)||(36691844-36692041)
chr2 (285-484)||(7677806-7678002)
chr2 (337-436)||(36175477-36175574)
chr2 (378-484)||(1421737-1421843)
chr2 (301-484)||(37876539-37876717)
chr2 (311-484)||(41694618-41694788)
chr2 (314-444)||(6436609-6436734)
chr2 (336-423)||(4264493-4264578)
chr2 (380-484)||(19062285-19062389)
chr2 (365-475)||(12647051-12647161)
chr2 (360-482)||(19028849-19028971)
chr2 (362-484)||(29173653-29173774)
chr2 (301-444)||(31128753-31128891)
chr2 (301-484)||(37994265-37994451)
chr2 (285-444)||(38445137-38445293)
chr2 (380-484)||(4778816-4778920)
chr2 (301-484)||(34128617-34128798)
chr2 (358-425)||(12554173-12554240)
chr2 (286-443)||(27097380-27097534)
chr2 (358-445)||(41327544-41327631)
chr2 (285-444)||(36943094-36943250)
chr2 (360-460)||(35220368-35220468)
chr2 (362-445)||(33760165-33760248)
chr2 (361-484)||(33923749-33923872)
chr2 (301-444)||(7448236-7448374)
chr2 (285-444)||(7646444-7646605)
chr2 (339-484)||(8809304-8809447)
chr2 (301-484)||(18763457-18763635)
chr2 (358-484)||(19595836-19595962)
chr2 (359-449)||(31788498-31788588)
chr2 (359-444)||(33585708-33585793)
chr2 (401-444)||(17994703-17994746)
chr2 (410-484)||(4041527-4041601)
chr2 (301-444)||(5427842-5427979)
chr2 (301-370)||(12647967-12648034)
chr2 (378-484)||(12677383-12677489)
chr2 (408-442)||(25087128-25087162)
chr2 (378-444)||(42698674-42698740)
chr2 (359-444)||(1415599-1415684)
chr2 (408-444)||(84135-84171)
chr2 (380-444)||(9169231-9169295)
chr2 (327-474)||(11812695-11812840)
chr2 (408-444)||(32679064-32679100)
chr2 (306-345)||(10548229-10548268)
chr2 (224-259)||(12648078-12648113)
chr2 (221-252)||(14955430-14955461)
chr2 (408-447)||(18113960-18113999)
chr2 (408-447)||(27949517-27949556)
chr2 (224-263)||(29574783-29574822)
chr2 (408-443)||(36323946-36323981)
chr2 (408-442)||(3240977-3241011)
chr2 (410-443)||(18695147-18695180)
chr2 (334-418)||(19597898-19597980)
chr2 (218-259)||(24461342-24461382)
chr2 (285-444)||(29279543-29279699)
chr2 (408-445)||(41431119-41431156)
chr2 (408-444)||(3269065-3269101)
chr2 (408-444)||(3269624-3269660)
chr2 (408-444)||(3270183-3270219)
chr2 (408-444)||(6173723-6173759)
chr2 (408-444)||(7015665-7015701)
chr2 (408-444)||(8308261-8308297)
chr2 (339-454)||(11833501-11833614)
chr2 (365-484)||(14416208-14416328)
chr2 (358-414)||(18107750-18107806)
chr2 (408-444)||(20047036-20047072)
chr2 (408-444)||(22421826-22421862)
chr2 (408-444)||(32913331-32913367)
chr2 (408-444)||(33229094-33229130)
chr2 (408-444)||(45128295-45128331)
[»] chr8 (70 HSPs)
chr8 (284-484)||(18890629-18890833)
chr8 (284-484)||(39657409-39657613)
chr8 (307-484)||(29617204-29617379)
chr8 (285-482)||(1236629-1236825)
chr8 (285-482)||(1239329-1239525)
chr8 (308-484)||(15344294-15344467)
chr8 (308-484)||(15433359-15433532)
chr8 (308-484)||(15524663-15524836)
chr8 (306-484)||(41896496-41896676)
chr8 (286-484)||(8443441-8443639)
chr8 (301-484)||(5333407-5333588)
chr8 (301-484)||(471096-471274)
chr8 (308-472)||(3240365-3240527)
chr8 (363-484)||(14585715-14585836)
chr8 (284-484)||(24099180-24099385)
chr8 (367-484)||(42046263-42046380)
chr8 (356-484)||(43833926-43834053)
chr8 (285-484)||(14916118-14916316)
chr8 (324-481)||(21237791-21237946)
chr8 (327-444)||(8981167-8981282)
chr8 (378-484)||(33347451-33347557)
chr8 (285-484)||(23230606-23230802)
chr8 (301-484)||(16247153-16247331)
chr8 (301-484)||(40619003-40619181)
chr8 (284-442)||(34609792-34609953)
chr8 (337-442)||(5046767-5046870)
chr8 (301-444)||(7677253-7677391)
chr8 (301-484)||(7883171-7883349)
chr8 (378-484)||(16928687-16928793)
chr8 (337-442)||(31013580-31013683)
chr8 (285-444)||(3673404-3673560)
chr8 (285-484)||(14544833-14545029)
chr8 (285-444)||(37971246-37971402)
chr8 (306-484)||(45445741-45445914)
chr8 (408-484)||(7198125-7198201)
chr8 (337-484)||(28897723-28897868)
chr8 (337-484)||(33214601-33214746)
chr8 (301-444)||(10377670-10377808)
chr8 (362-484)||(26469076-26469198)
chr8 (362-484)||(27110395-27110517)
chr8 (374-444)||(28086783-28086853)
chr8 (359-484)||(17693544-17693669)
chr8 (359-484)||(20553171-20553296)
chr8 (359-484)||(20559674-20559799)
chr8 (359-484)||(20571236-20571361)
chr8 (284-439)||(8826171-8826325)
chr8 (308-442)||(27498337-27498465)
chr8 (409-484)||(24186591-24186666)
chr8 (358-443)||(19444035-19444120)
chr8 (361-430)||(39450577-39450646)
chr8 (359-484)||(40211232-40211357)
chr8 (218-258)||(20227438-20227478)
chr8 (408-444)||(33896176-33896212)
chr8 (399-478)||(10331165-10331244)
chr8 (409-444)||(23851448-23851483)
chr8 (378-437)||(24419143-24419202)
chr8 (307-442)||(9637381-9637511)
chr8 (301-359)||(20227333-20227391)
chr8 (409-442)||(14906879-14906912)
chr8 (408-445)||(17427169-17427206)
chr8 (305-484)||(25190995-25191171)
chr8 (305-423)||(36948428-36948541)
chr8 (311-391)||(44099927-44100005)
chr8 (227-259)||(3240282-3240314)
chr8 (223-259)||(8443672-8443708)
chr8 (408-444)||(11196982-11197018)
chr8 (318-389)||(23851489-23851558)
chr8 (408-444)||(29777313-29777349)
chr8 (408-444)||(32724435-32724471)
chr8 (408-444)||(42447981-42448017)
[»] chr7 (76 HSPs)
chr7 (284-484)||(28476182-28476385)
chr7 (284-484)||(35132902-35133106)
chr7 (284-484)||(22742899-22743103)
chr7 (285-484)||(24350771-24350972)
chr7 (301-482)||(38880512-38880691)
chr7 (306-483)||(41553367-41553542)
chr7 (306-444)||(41553751-41553887)
chr7 (284-423)||(1749140-1749283)
chr7 (307-484)||(35665067-35665243)
chr7 (301-484)||(24069326-24069507)
chr7 (306-444)||(41554096-41554232)
chr7 (307-484)||(3224343-3224517)
chr7 (285-484)||(9450069-9450265)
chr7 (285-484)||(12141240-12141436)
chr7 (285-484)||(42978573-42978769)
chr7 (301-484)||(37837390-37837568)
chr7 (285-444)||(19296833-19296989)
chr7 (285-484)||(24770209-24770405)
chr7 (285-484)||(48316744-48316940)
chr7 (358-442)||(5348566-5348650)
chr7 (285-442)||(8001520-8001674)
chr7 (358-477)||(11343843-11343961)
chr7 (393-482)||(5078348-5078437)
chr7 (285-484)||(34899539-34899735)
chr7 (307-484)||(5792783-5792955)
chr7 (285-444)||(30756791-30756947)
chr7 (379-484)||(39171522-39171627)
chr7 (285-484)||(39328722-39328918)
chr7 (285-484)||(48061385-48061581)
chr7 (301-449)||(3394452-3394600)
chr7 (337-484)||(46700049-46700194)
chr7 (337-484)||(9977142-9977283)
chr7 (304-484)||(25287118-25287293)
chr7 (373-443)||(1769151-1769221)
chr7 (285-484)||(19404689-19404885)
chr7 (285-484)||(45349731-45349927)
chr7 (360-444)||(13796901-13796985)
chr7 (307-443)||(39229002-39229132)
chr7 (332-425)||(24610161-24610256)
chr7 (301-397)||(26623809-26623900)
chr7 (407-480)||(2407243-2407315)
chr7 (359-484)||(28044688-28044813)
chr7 (301-388)||(25068063-25068147)
chr7 (301-442)||(27997069-27997205)
chr7 (333-416)||(29617700-29617781)
chr7 (378-437)||(22087370-22087429)
chr7 (378-484)||(38798834-38798940)
chr7 (392-442)||(46822712-46822762)
chr7 (301-444)||(47590292-47590430)
chr7 (301-421)||(5775184-5775301)
chr7 (306-478)||(11653865-11654040)
chr7 (358-483)||(25255260-25255385)
chr7 (378-483)||(28062156-28062261)
chr7 (355-484)||(40993187-40993316)
chr7 (304-484)||(969391-969557)
chr7 (380-484)||(4530131-4530235)
chr7 (408-444)||(22927824-22927860)
chr7 (218-258)||(25067981-25068021)
chr7 (218-258)||(44311951-44311991)
chr7 (286-351)||(48930730-48930797)
chr7 (373-484)||(4999961-5000072)
chr7 (413-484)||(48930795-48930866)
chr7 (284-331)||(29844825-29844874)
chr7 (301-359)||(44311846-44311904)
chr7 (218-259)||(35665285-35665326)
chr7 (408-444)||(433645-433681)
chr7 (408-444)||(1448784-1448820)
chr7 (408-444)||(1485211-1485247)
chr7 (325-357)||(4121740-4121772)
chr7 (408-444)||(6558964-6559000)
chr7 (408-444)||(19560085-19560121)
chr7 (408-444)||(26492452-26492488)
chr7 (408-444)||(42067016-42067052)
chr7 (408-444)||(42311367-42311403)
chr7 (408-444)||(42408449-42408485)
chr7 (408-444)||(45198987-45199023)
[»] chr1 (69 HSPs)
chr1 (301-484)||(48750160-48750345)
chr1 (327-484)||(37720081-37720240)
chr1 (308-484)||(24582937-24583110)
chr1 (284-484)||(47132863-47133063)
chr1 (301-484)||(36775642-36775827)
chr1 (308-484)||(34413024-34413200)
chr1 (285-481)||(49626875-49627070)
chr1 (284-436)||(16161794-16161950)
chr1 (301-481)||(41994406-41994584)
chr1 (285-484)||(44543234-44543432)
chr1 (325-481)||(16262864-16263018)
chr1 (301-484)||(14872622-14872799)
chr1 (338-484)||(3228285-3228429)
chr1 (285-484)||(19060871-19061069)
chr1 (301-423)||(34528709-34528829)
chr1 (301-484)||(7337595-7337773)
chr1 (324-439)||(6217804-6217917)
chr1 (301-484)||(12635149-12635330)
chr1 (337-444)||(21947590-21947695)
chr1 (285-449)||(1742245-1742406)
chr1 (358-480)||(18939354-18939475)
chr1 (301-484)||(35484323-35484501)
chr1 (285-484)||(5983800-5983996)
chr1 (359-444)||(44915674-44915759)
chr1 (359-484)||(27580060-27580185)
chr1 (285-484)||(45415522-45415718)
chr1 (301-437)||(7836775-7836906)
chr1 (301-481)||(10776396-10776571)
chr1 (378-484)||(43412428-43412534)
chr1 (359-484)||(32395033-32395158)
chr1 (301-430)||(27456522-27456646)
chr1 (312-483)||(31692400-31692568)
chr1 (285-484)||(23291574-23291770)
chr1 (390-443)||(25564064-25564117)
chr1 (286-482)||(13144746-13144939)
chr1 (362-484)||(32873796-32873918)
chr1 (358-444)||(45789575-45789661)
chr1 (337-445)||(31919003-31919109)
chr1 (399-484)||(32679073-32679158)
chr1 (378-487)||(39888236-39888345)
chr1 (303-444)||(34878250-34878386)
chr1 (364-483)||(51916599-51916715)
chr1 (319-444)||(1602087-1602209)
chr1 (390-444)||(24597296-24597350)
chr1 (410-484)||(31984247-31984321)
chr1 (285-484)||(8211843-8212038)
chr1 (394-443)||(15431639-15431688)
chr1 (408-444)||(7342813-7342849)
chr1 (408-444)||(9172581-9172617)
chr1 (408-444)||(9180563-9180599)
chr1 (360-439)||(568757-568835)
chr1 (301-385)||(940345-940424)
chr1 (409-484)||(31317821-31317896)
chr1 (408-443)||(51868600-51868635)
chr1 (311-484)||(9341716-9341886)
chr1 (410-484)||(15492373-15492447)
chr1 (378-444)||(49504567-49504633)
chr1 (408-445)||(25406237-25406274)
chr1 (223-252)||(37720281-37720310)
chr1 (309-389)||(39927549-39927627)
chr1 (408-444)||(5324512-5324548)
chr1 (223-259)||(13144965-13145001)
chr1 (408-444)||(14545608-14545644)
chr1 (358-442)||(30506146-30506230)
chr1 (408-444)||(40880967-40881003)
chr1 (408-444)||(45805782-45805818)
chr1 (408-444)||(48365719-48365755)
chr1 (408-444)||(50166053-50166089)
chr1 (408-444)||(50272094-50272130)
[»] chr3 (88 HSPs)
chr3 (284-484)||(51923679-51923883)
chr3 (284-484)||(7546566-7546771)
chr3 (301-484)||(51303575-51303760)
chr3 (284-484)||(42460705-42460905)
chr3 (284-484)||(8914664-8914868)
chr3 (301-445)||(12947245-12947387)
chr3 (285-484)||(21289746-21289949)
chr3 (284-484)||(29922013-29922213)
chr3 (284-484)||(29971166-29971366)
chr3 (285-484)||(53807790-53807988)
chr3 (301-484)||(16235397-16235582)
chr3 (284-484)||(27706158-27706362)
chr3 (284-484)||(53508181-53508382)
chr3 (324-435)||(7887424-7887535)
chr3 (301-444)||(29239318-29239459)
chr3 (342-484)||(14859506-14859646)
chr3 (308-484)||(35175386-35175560)
chr3 (333-484)||(628855-629003)
chr3 (342-484)||(52115953-52116092)
chr3 (306-425)||(51487086-51487207)
chr3 (337-484)||(48199788-48199933)
chr3 (357-484)||(50194267-50194394)
chr3 (301-448)||(4396302-4396447)
chr3 (285-484)||(40487285-40487481)
chr3 (325-484)||(44805029-44805185)
chr3 (311-425)||(32246432-32246544)
chr3 (324-484)||(26739289-26739447)
chr3 (285-484)||(36461363-36461559)
chr3 (364-484)||(19339212-19339331)
chr3 (308-448)||(41818194-41818335)
chr3 (285-484)||(9998427-9998623)
chr3 (285-484)||(23799842-23800038)
chr3 (301-436)||(4821783-4821915)
chr3 (325-444)||(26716079-26716196)
chr3 (285-443)||(35864905-35865060)
chr3 (301-484)||(21533741-21533919)
chr3 (305-484)||(33579862-33580036)
chr3 (337-484)||(12149716-12149861)
chr3 (301-441)||(25460974-25461114)
chr3 (301-449)||(10229454-10229597)
chr3 (285-445)||(10233030-10233187)
chr3 (378-484)||(21431663-21431769)
chr3 (285-444)||(6954668-6954824)
chr3 (285-484)||(20608831-20609027)
chr3 (306-484)||(38545782-38545955)
chr3 (285-484)||(43488522-43488718)
chr3 (285-484)||(45568377-45568573)
chr3 (359-484)||(46304452-46304577)
chr3 (337-444)||(45424809-45424914)
chr3 (338-484)||(48650666-48650810)
chr3 (304-484)||(52923049-52923224)
chr3 (285-445)||(10108196-10108353)
chr3 (285-422)||(1649377-1649513)
chr3 (301-437)||(3606751-3606885)
chr3 (359-484)||(9797466-9797591)
chr3 (360-445)||(18011052-18011137)
chr3 (359-484)||(21313067-21313192)
chr3 (359-484)||(40556733-40556858)
chr3 (337-444)||(32701502-32701607)
chr3 (311-390)||(51202248-51202325)
chr3 (413-484)||(3085233-3085304)
chr3 (358-429)||(27856194-27856265)
chr3 (378-484)||(20464902-20465008)
chr3 (306-484)||(47041980-47042154)
chr3 (383-444)||(7448886-7448947)
chr3 (383-444)||(7457028-7457089)
chr3 (218-259)||(7887562-7887603)
chr3 (302-444)||(12050620-12050757)
chr3 (359-444)||(43016886-43016971)
chr3 (328-408)||(52496929-52497007)
chr3 (408-444)||(3848873-3848909)
chr3 (223-259)||(29921952-29921988)
chr3 (223-259)||(29971105-29971141)
chr3 (334-384)||(22290950-22290998)
chr3 (302-345)||(24396551-24396594)
chr3 (311-389)||(25162439-25162515)
chr3 (311-389)||(35499193-35499269)
chr3 (222-259)||(12947434-12947471)
chr3 (221-262)||(22290835-22290876)
chr3 (359-444)||(45425623-45425708)
chr3 (226-259)||(50194437-50194470)
chr3 (415-484)||(54149078-54149147)
chr3 (408-444)||(14464594-14464630)
chr3 (408-444)||(17237889-17237925)
chr3 (407-439)||(20494421-20494453)
chr3 (408-444)||(29503545-29503581)
chr3 (408-444)||(30648673-30648709)
chr3 (224-252)||(42460647-42460675)
[»] chr6 (51 HSPs)
chr6 (284-484)||(8102680-8102884)
chr6 (301-484)||(546003-546189)
chr6 (284-484)||(1523362-1523566)
chr6 (284-484)||(14801781-14801985)
chr6 (301-481)||(30493509-30493687)
chr6 (301-484)||(26588404-26588585)
chr6 (303-484)||(28981156-28981335)
chr6 (301-484)||(34185625-34185806)
chr6 (284-484)||(30776626-30776821)
chr6 (301-484)||(3913506-3913684)
chr6 (304-444)||(1933664-1933802)
chr6 (301-482)||(32191664-32191841)
chr6 (301-484)||(528282-528463)
chr6 (301-484)||(31296797-31296978)
chr6 (301-484)||(23128598-23128776)
chr6 (378-484)||(31852125-31852231)
chr6 (359-484)||(127702-127827)
chr6 (359-484)||(29255378-29255503)
chr6 (359-484)||(30894633-30894757)
chr6 (301-444)||(3355097-3355235)
chr6 (378-484)||(27097574-27097680)
chr6 (285-444)||(606166-606322)
chr6 (285-444)||(33053140-33053296)
chr6 (337-484)||(12170481-12170626)
chr6 (284-482)||(7976121-7976309)
chr6 (332-484)||(9380031-9380181)
chr6 (301-484)||(29319810-29319988)
chr6 (301-484)||(32327149-32327327)
chr6 (285-444)||(34018522-34018678)
chr6 (285-444)||(7515174-7515330)
chr6 (365-489)||(679148-679272)
chr6 (337-424)||(11321461-11321546)
chr6 (362-484)||(30608447-30608569)
chr6 (309-359)||(34489254-34489304)
chr6 (301-424)||(19164688-19164809)
chr6 (218-259)||(28981072-28981113)
chr6 (408-444)||(10228766-10228802)
chr6 (408-444)||(16419245-16419281)
chr6 (307-425)||(22571457-22571574)
chr6 (360-444)||(24227704-24227788)
chr6 (408-444)||(35001677-35001713)
chr6 (379-442)||(6957203-6957266)
chr6 (369-484)||(20225894-20226009)
chr6 (369-484)||(22119878-22119993)
chr6 (311-389)||(23947313-23947389)
chr6 (408-445)||(4468645-4468682)
chr6 (218-259)||(30493425-30493466)
chr6 (337-444)||(67973-68078)
chr6 (224-252)||(1523307-1523335)
chr6 (408-444)||(25398650-25398686)
chr6 (218-258)||(31225987-31226026)
[»] scaffold0888 (1 HSPs)
scaffold0888 (284-484)||(1610-1814)
[»] scaffold0042 (1 HSPs)
scaffold0042 (324-484)||(92428-92586)
[»] scaffold0347 (2 HSPs)
scaffold0347 (309-484)||(6014-6187)
scaffold0347 (223-252)||(5912-5941)
[»] scaffold0039 (1 HSPs)
scaffold0039 (286-484)||(93065-93264)
[»] scaffold0009 (2 HSPs)
scaffold0009 (333-484)||(58020-58169)
scaffold0009 (224-259)||(58233-58268)
[»] scaffold0445 (1 HSPs)
scaffold0445 (301-484)||(1323-1501)
[»] scaffold0127 (1 HSPs)
scaffold0127 (301-484)||(15470-15649)
[»] scaffold0017 (1 HSPs)
scaffold0017 (285-484)||(32679-32875)
[»] scaffold0049 (1 HSPs)
scaffold0049 (339-484)||(71232-71375)
[»] scaffold0884 (1 HSPs)
scaffold0884 (337-484)||(1905-2050)
[»] scaffold0634 (1 HSPs)
scaffold0634 (337-484)||(8524-8669)
[»] scaffold0064 (1 HSPs)
scaffold0064 (368-439)||(19051-19122)
[»] scaffold0262 (1 HSPs)
scaffold0262 (359-484)||(1751-1876)
[»] scaffold0021 (1 HSPs)
scaffold0021 (428-484)||(4273-4329)
[»] scaffold0121 (1 HSPs)
scaffold0121 (373-484)||(31206-31317)
[»] scaffold0136 (2 HSPs)
scaffold0136 (285-445)||(10013-10170)
scaffold0136 (362-425)||(38088-38151)
[»] scaffold0095 (1 HSPs)
scaffold0095 (361-430)||(9421-9490)
[»] scaffold0088 (1 HSPs)
scaffold0088 (399-444)||(50848-50893)
[»] scaffold0026 (1 HSPs)
scaffold0026 (359-444)||(71836-71921)
[»] scaffold0495 (1 HSPs)
scaffold0495 (408-444)||(5485-5521)
[»] scaffold0015 (1 HSPs)
scaffold0015 (399-439)||(4017-4057)
[»] scaffold0050 (1 HSPs)
scaffold0050 (379-484)||(65974-66079)
[»] scaffold0311 (1 HSPs)
scaffold0311 (408-444)||(8778-8814)
[»] scaffold0146 (1 HSPs)
scaffold0146 (408-444)||(16274-16310)
[»] scaffold0128 (1 HSPs)
scaffold0128 (408-484)||(36906-36982)
[»] scaffold0003 (1 HSPs)
scaffold0003 (408-444)||(361753-361789)


Alignment Details
Target: chr4 (Bit Score: 184; Significance: 2e-99; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 33332703 - 33332501
Alignment:
Q  284 cgtgatttcgtcgtctctg--cggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttatt 381  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33332703 cgtgatttcgtcgtctgtgtgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgtttttatt 33332604  T
Q  382 gaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33332603 gaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 33332504  T
Q  482 att 484  Q
    |||    
T  33332503 att 33332501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 36194701 - 36194885
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcaga 398  Q
    |||| |||||||||||| |||| |||||||| |||||||||||||||||||  |||||||||||||||||||| |||| ||||||||||||| ||||| |    
T  36194701 tgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcaaa 36194800  T
Q  399 caatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||| |||||||||||||||| ||| |||| |||||||||||| ||  ||||| ||| || |||||||||||| ||||||||    
T  36194801 caatcacaaattcaatcaatgattt-gacatcaaagttgcagatccagaaacatgggtattctggtgatttagatttcatcatatt 36194885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 52944307 - 52944488
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| ||||  ||||||| |||||||| |||| || ||||||||  ||||||||||||  ||| ||||||||||||| |||||| ||    
T  52944307 tgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttg--cggtgttcgtttgtttcatattgaaagatcagcttcagtca 52944404  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  ||| ||||| ||| || |||||||||||| ||||||||    
T  52944405 atcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagcatgggtattctggtgatttagatttcatcatatt 52944488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 306 - 484
Target Start/End: Original strand, 18935779 - 18935959
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatc 403  Q
    ||||||| |||| |||| |||||||  |||||||||||||| ||||  |||||||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  18935779 cgttgtgctgttcgtcgtcttgtgcagcgttgtttgatttcacatcctttgttgtgcggtgttcgtttggttcgtattgaaagattaacttcagacaatc 18935878  T
Q  404 acagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    | | ||||||| |||||||||| | ||||||||||||||||||||| || || ||| || |||||||||||| ||||||||    
T  18935879 aaaaattcaattaatgatttgggcatcaacgttgcagatccaaaagcataggtattctggtgatttagatttcatcatatt 18935959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 51888324 - 51888143
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||||  |||||||||||| |||| |||||||||||||||||||  ||    
T  51888324 tgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttg--cggtgttcgtttggttcatattgaaagatcaacttcaatca 51888227  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||| ||| |||||||||||| || || ||||||||| |||  |||| ||| | ||| || |||||||||||||||||||||    
T  51888226 atcacaaatttaatcaatgattttgatgttaacgttgcatatctgaaagcatgagtattctggtgatttagattttatcatatt 51888143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 27651917 - 27652120
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||  |||||||||||| |||| ||||||||  ||||||||||||||||||  |||||||||||||||||||| |||| ||    
T  27651917 cgtgatttcgtcgtcttagtgcaacgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgta 27652016  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||   ||||||||||||||||| ||| ||||| ||| |  || ||||||||| |||    
T  27652017 ttgaaagatcagctttagacaatcacaaattcaatcaatgatttgggtatcaacgttgcagatccagaagcatgggtattctagtg-tttagatttcatc 27652115  T
Q  480 atatt 484  Q
    |||||    
T  27652116 atatt 27652120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 31891423 - 31891219
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||||||||| |||| ||||||   |||||||||||||||||||  |||||||||||||||||||| |||| ||    
T  31891423 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgtagcgttgtttgatttcgcatccgttgttgtgcggtgttcgtttggttcgta 31891324  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    |||||| ||||  |||||||||||||| |||||| | ||||||||| ||||||||||||| ||||| ||| ||| | ||| || |||||||||||| ||     
T  31891323 ttgaaaaatcagtttcagacaatcacaaattcaaaccatgatttgggcgtcaacgttgcaaatccagaagcatgagtattctggtgatttagatttcatt 31891224  T
Q  480 atatt 484  Q
    |||||    
T  31891223 atatt 31891219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 22300826 - 22301026
Alignment:
Q  284 cgtgatttcgtcgtctctg--cggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttatt 381  Q
    |||||||||||||||| ||  || |||||||||||| |||| |||||||| |||||||||||||||| || |||||  ||||||| |||| | || | ||    
T  22300826 cgtgatttcgtcgtctgtgtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttg--cggtgtttgtttagctcatctt 22300923  T
Q  382 gaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    ||||||||| ||| || ||||||||||||||||| |||||||||||| | ||||||||||||| |||  ||| | |||||| |||||||||||| || ||    
T  22300924 gaaagatcagctttagtcaatcacagattcaatcgatgatttggacgccgacgttgcagatccgaaatcatgagtattttggtgatttagatttcattat 22301023  T
Q  482 att 484  Q
    |||    
T  22301024 att 22301026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 301 - 481
Target Start/End: Original strand, 9643384 - 9643562
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||| |||||||||||| |||| |||| |||||||||||||||||| ||||||||||  | |||||||||| |||| |||| ||||||||||||||| ||    
T  9643384 tgcgacgttgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttg--cagtgttcgtttggttcatattaaaagatcaacttcagtca 9643481  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    |||||| ||||||| ||||||||| || |||| |||  ||||||  ||| ||| | ||| || ||||||| ||||||||||    
T  9643482 atcacatattcaattaatgatttgaacatcaatgttatagatccggaagtatgagtattctggtgatttaaattttatcat 9643562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 307 - 482
Target Start/End: Complemental strand, 22038909 - 22038736
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    ||||||||||| |||   ||||| | |||||||||||||||| ||||||||||  ||| |||||| |||| |||||||||||| ||||||| ||||||||    
T  22038909 gttgtgttgttcgtccttttgtgtggcgttgtttgatttcgcgtcttgttgtg--gtgctcgtttggttcatattgaaagatctacttcagtcaatcaca 22038812  T
Q  407 gattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
     ||||||| |||||||| ||| |||| |||||||||||| ||| ||| | |||| | ||||||| |||||||||||    
T  22038811 tattcaataaatgattttgacatcaatgttgcagatccagaagcatgtgtatttcggtgatttaaattttatcata 22038736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 1621618 - 1621441
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcaga 398  Q
    |||| |||||||||||  |||| ||||||||   |||||||||||||||||  |||||||| ||||||||||| |||| ||||||||||||| ||||| |    
T  1621618 tgcgacgttgtgttgtccgtcgtcttgtgcg---ttgtttgatttcgcatcctttgttgtgtggtgttcgtttggttcgtattgaaagatcagcttcaaa 1621522  T
Q  399 caatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||| | |||||||||||||||||| ||| ||||||||||||||| ||    ||| ||| || |||||||||||| ||||||||    
T  1621521 caatcataaattcaatcaatgatttgggcgt-aacgttgcagatccagaa----gggtattctggtgatttagatttcatcatatt 1621441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 36204517 - 36204311
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcga-cgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttat 380  Q
    ||||||||||||||||   ||||||||||||||||| |||| | ||| ||  |||||||||||||||||| ||||  |||||||||| ||| |||| |||    
T  36204517 cgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgt--tgcggtgttcatttggttcatat 36204420  T
Q  381 tgaaagatcaacttcagaca-----atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattt 475  Q
    ||||| |||| |||||| ||     |||||| |||||||||||||||||||||||||||||||||||||  ||||  |   ||| || ||||||||||||    
T  36204419 tgaaaaatcagcttcagtcaatcacatcacaaattcaatcaatgatttggacgtcaacgttgcagatccggaagagagaatattctggtgatttagattt 36204320  T
Q  476 tatcatatt 484  Q
    |||||||||    
T  36204319 tatcatatt 36204311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 17949452 - 17949256
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||||||||  ||||||| ||||   |||||| || | |||| |  ||||||||||||  ||| |||||    
T  17949452 gtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtt---tgattttgcgttttgtcg--cggtgttcgtttaattcctattg 17949358  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||| |||| ||| |||||| |||||||| |  ||||||||||||||||||  ||||||||| |||||||||| |||| ||||||||||    
T  17949357 aaagatctacatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttaggttttatcata 17949258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 17953304 - 17953108
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||||||||  ||||||| ||||   |||||| || | |||| |  ||||||||||||  ||| |||||    
T  17953304 gtgatttcgtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtt---tgattttgcgttttgtcg--cggtgttcgtttaattcctattg 17953210  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||| |||| ||| |||||| |||||||| |  ||||||||||||||||||  ||||||||| |||||||||| |||| ||||||||||    
T  17953209 aaagatctacatcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttaggttttatcata 17953110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 333 - 481
Target Start/End: Original strand, 47158251 - 47158400
Alignment:
Q  333 cgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaa 432  Q
    |||||||||||||| ||||||||| || | |||| |||| | |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||     
T  47158251 cgttgtttgatttcacatcttgttatgtgttgtttgtttggatcttattgaaagattaacttcagacaatcacagattcaatcaatgatttggccgtcat 47158350  T
Q  433 c-gttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    |  |||||||||  |||| ||| | ||| || |||||||||| |||||||    
T  47158351 catttgcagatctgaaagtatgagtattctgctgatttagatattatcat 47158400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 484
Target Start/End: Original strand, 9048672 - 9048841
Alignment:
Q  313 ttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattca 412  Q
    |||||||||| |||||||| |||||| ||||||||  ||||||||  |||||||||||| |||  | ||||||||| | ||||||  ||||||| |||||    
T  9048672 ttgtttgtcgtcttgtgcggcgttgtctgatttcgggtcttgttg--cggtgttcgtttggtttcttttgaaagataagcttcagttaatcacaaattca 9048769  T
Q  413 atcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||||  ||||||||||||| |||  |||  ||||| ||| |||||||||| |||||||||||||    
T  9048770 atcaatgatttgagcgtcaacgttgcaaatctgaaaacatgggtattctgatgatttaaattttatcatatt 9048841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 443
Target Start/End: Original strand, 9713915 - 9714048
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    |||||||||| | || | ||||||||||||||||||||| ||| ||||||  ||| ||||||||| ||| ||||| ||||||| ||||| |||||||||     
T  9713915 ttgtgttgttcgccgtcatgtgcgacgttgtttgatttcacatattgttg--cggagttcgtttctttcatattggaagatcagcttcaaacaatcacaa 9714012  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    |||||||||| ||||||| |||||||||||||||||    
T  9714013 attcaatcaacgatttgggcgtcaacgttgcagatc 9714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 444
Target Start/End: Original strand, 28857398 - 28857539
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| || | |||||||| |||||||||||| ||| ||| ||||  ||||||||||||  ||| ||||||||||||| |||||| ||    
T  28857398 tgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttg--cggtgttcgtttgtttcatattgaaagatcagcttcagtca 28857495  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||| |||||||  |||||||||||| ||||||| |||||||    
T  28857496 atcacatattcaattgatgatttggacgccaacgtttcagatcc 28857539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 307 - 484
Target Start/End: Original strand, 36161713 - 36161888
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    ||||| ||||| || | |||||||| |||||||||||||  | | ||||||  |||||||||||| |||| ||| ||||||| |  ||||| ||||||||    
T  36161713 gttgttttgttcgttgtcttgtgcgtcgttgtttgattttacgttttgttg--cggtgttcgttttgttcatatcgaaagattagtttcagtcaatcaca 36161810  T
Q  407 gattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
     ||||||||||||||||||||| ||||||| ||||||| |||  ||| | |||||  |||||||||||||||||||||    
T  36161811 tattcaatcaatgatttggacgccaacgttacagatccgaaaacatgagtattttcgtgatttagattttatcatatt 36161888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 54021859 - 54022037
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||| |||||||||| |||| |||||||| ||||   ||||||||  |||||| |  |||||||||||| |||| |||||||||||| || |||| ||    
T  54021859 tgcggcattgtgttgttagtcgtcttgtgcggcgtt---tgatttcgtgtcttgtcg--cggtgttcgtttagttcctattgaaagatcgacatcagtca 54021953  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| ||| ||||||||||||||| ||||||||||||||||| |||  ||||  |||| | ||| |||||||||||||||||    
T  54021954 attacaaattgaatcaatgatttggatgtcaacgttgcagatccgaaaacatggatatttcggtgacttagattttatcatatt 54022037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 33332958 - 33332898
Alignment:
Q  18 agaactatactcgagagatagagagataacatcttttatattggagggataatggatcttt 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33332958 agaactatactcgagagatagagagataacatcttttatattggagggataatggatcttt 33332898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 326 - 484
Target Start/End: Complemental strand, 2069668 - 2069512
Alignment:
Q  326 tgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttgg 425  Q
    ||||||||||||||||||||||||||||||||  |||| ||| ||| |||| |||||||| ||||  || || |||||| ||||||||||||| ||||||    
T  2069668 tgtgcgacgttgtttgatttcgcatcttgttg--cggtattcatttggttcatattgaaatatcagttttagtcaatcatagattcaatcaattatttgg 2069571  T
Q  426 acgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
      |||||||||||| ||  | ||| ||||| ||| || ||||||| |||||||||||||    
T  2069570 gtgtcaacgttgcaaatttagaagcatgggtattatggtgatttatattttatcatatt 2069512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 334 - 484
Target Start/End: Original strand, 21662466 - 21662614
Alignment:
Q  334 gttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaac 433  Q
    ||||||||||||||| |||||| |  |||| ||||||| |||| ||||||||||||||| |||| |||| ||| || ||||||||||||||  |||||||    
T  21662466 gttgtttgatttcgcgtcttgtcg--cggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaac 21662563  T
Q  434 gttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||  ||| ||||| |||| | ||| |||| ||||||||||||    
T  21662564 gttgcagatccggaagcatgggtatttcggtgacttaggttttatcatatt 21662614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 334 - 484
Target Start/End: Original strand, 21671230 - 21671378
Alignment:
Q  334 gttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaac 433  Q
    ||||||||||||||| |||||| |  |||| ||||||| |||| ||||||||||||||| |||| |||| ||| || ||||||||||||||  |||||||    
T  21671230 gttgtttgatttcgcgtcttgtcg--cggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaac 21671327  T
Q  434 gttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||  ||| ||||| |||| | ||| |||| ||||||||||||    
T  21671328 gttgcagatccggaagcatgggtatttcggtgacttaggttttatcatatt 21671378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 448
Target Start/End: Original strand, 18048879 - 18049024
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| |||||||||||||||| |||||| | ||||||||||||| ||  |||||||  ||||||||||||  ||| ||||||||||| | |||||| ||    
T  18048879 tgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttg--cggtgttcgtttgattcatattgaaagataagcttcagtca 18048976  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaa 448  Q
    |||| |||||||||| || |||| ||| |||| |||||||||| ||||    
T  18048977 atcatagattcaatcgataattttgacatcaatgttgcagatcaaaaa 18049024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 259
Target Start/End: Complemental strand, 33332860 - 33332756
Alignment:
Q  156 gttacgacttttgctgactccaattttttagtgagagaaatttcacnnnnnnnn-aagttcaatttctctttctttcaatctaaataagtgatttccata 254  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||         |||||| |||||||||||||| |||||||||||||||||||||||    
T  33332860 gttacgacttttgctgactctaattttttagtgagagaaacttcactttttttttaagttcgatttctctttcttttaatctaaataagtgatttccata 33332761  T
Q  255 tatat 259  Q
    |||||    
T  33332760 tatat 33332756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 394 - 484
Target Start/End: Complemental strand, 47320434 - 47320344
Alignment:
Q  394 tcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | | | ||| || ||||||||||| |||||||||    
T  47320434 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatatt 47320344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 21686369 - 21686174
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||||||| |||||||| |||| |||||||| ||||   ||||||||| |||||  |  ||||||| |||  |||| |||||    
T  21686369 gtgatttcgtcgtctaagtgcggcgt-gtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgccg--cggtgtttgttcagttcctattg 21686276  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||  || | ||| |||||| ||||||||||||||||||||||||||||||  ||| ||| | |||||| |||||||| ||||||||||    
T  21686275 aaagatctacatcaatcagttacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtattttggtgatttaggttttatcata 21686176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 444
Target Start/End: Original strand, 22611164 - 22611320
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   |||||| || | |||| |  ||||||| |||  |||| |||||    
T  22611164 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgttttgtcg--cggtgtttgttcagttcctattg 22611258  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||||||||||    
T  22611259 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatcc 22611320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 445
Target Start/End: Complemental strand, 4142883 - 4142723
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||  |||||||||||  | |||| |  ||||||| |||   ||| | |||    
T  4142883 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgatttcgtgttttgtcg--cggtgtttgttcaattcctcttg 4142786  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    ||||||| || |||| |||| ||| |||||| |||||||||||||||||||||||||||||||    
T  4142785 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatcca 4142723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 307 - 484
Target Start/End: Complemental strand, 31359854 - 31359678
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    |||||||| || |||| ||||||||||||||| ||||||| | ||||||||  | ||||| | || |||| |||| |||||||||||| || ||||||||    
T  31359854 gttgtgttattcgtcgtcttgtgcgacgttgtatgatttcacgtcttgttg--cagtgtttgcttggttcctatttaaagatcaactttagtcaatcaca 31359757  T
Q  407 gattcaatc-aatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||| ||  ||||||| ||||||||||||||| |  ||| ||| | | | || ||||||||||||| |||||||    
T  31359756 gattcaatcaaacaatttggaagtcaacgttgcagattccgaagcatgtgtaatctggtgatttagattttctcatatt 31359678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 10496334 - 10496512
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||| ||||||||| |||| |||||| ||||||   |||||| || |||||| |  | |||||||||| |||| ||||||||||||  | |||| ||    
T  10496334 tgcggcgatgtgttgttcgtcgtcttgtgtgacgtt---tgattttgcgtcttgtcg--cagtgttcgtttagttcctattgaaagatcggcatcagtca 10496428  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| ||||||||||| ||||||| ||||||||||  ||| ||||| |||| | ||| |||| ||||||||||||    
T  10496429 attacaaattcaaccaatgatttgggcgtcaactttgcagatccgtaagcatgggtatttcggtgagttaggttttatcatatt 10496512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 444
Target Start/End: Original strand, 13634096 - 13634252
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| ||||||||| |||    |||||||| |||||| |  ||||||| |||  |||| |||||    
T  13634096 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgaggtta---gatttcgcgtcttgtcg--cggtgtttgttcagttcctattg 13634190  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||  |||| ||| |||||| ||| ||||||||||||||||||||||||||    
T  13634191 aaagatctacatcaatcaattacaaattcaagcaacgatttggacgtcaacgttgcagatcc 13634252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 444
Target Start/End: Original strand, 32766495 - 32766651
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||| ||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| |||  |||| ||||     
T  32766495 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcg--cggtgtttgttcagttcctatta 32766589  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| ||| ||||||||||||||||||||||||| |||||||||||    
T  32766590 aaagatctacatcagtcaattacaaattcaatcaatgatttggacgtcaatgttgcagatcc 32766651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 35348288 - 35348484
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||  ||||||||||  |||||||||| |||  |||||    
T  35348288 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgtttcttgttgtg--gtgttcgtttagttactattg 35348382  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||||||  |   || |||| ||| |||||| ||||||| |||| |||||||||||||||||  ||| ||| | ||||  |||| |||| ||||||||||    
T  35348383 aaagatcggcgatagtcaattacaaattcaaccaatgatctggatgtcaacgttgcagatccggaagcatgtgaatttcaatgacttaggttttatcata 35348482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 484
Target Start/End: Original strand, 37465510 - 37465659
Alignment:
Q  332 acgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtca 431  Q
    ||||||||||||||| | |||| || ||  |||||||||| ||||  |||||||||||| |||| | ||||| || ||||||||||| |||||||| |||    
T  37465510 acgttgtttgatttcacgtcttcttttg--gtgttcgtttggttcacattgaaagatcatcttcggtcaatcgcatattcaatcaataatttggacatca 37465607  T
Q  432 acgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||| |||||||| || ||| |  ||| || |||||||||||||||||||||    
T  37465608 acgttacagatccataa-aatagatattctggtgatttagattttatcatatt 37465659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 484
Target Start/End: Original strand, 2520850 - 2520956
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    |||||||||||| || |||  |||| ||| ||| || ||||||||||||||||||||||||||||||  ||| ||||| |||| | ||||||||||||||    
T  2520850 tattgaaagatctacatcaatcaattacaaattaaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttagatttta 2520949  T
Q  478 tcatatt 484  Q
    || ||||    
T  2520950 tcgtatt 2520956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 8670484 - 8670662
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||  ||||||||    |||||||||||||  ||||| |  ||||||||||||  ||| ||||||||||||  | |||| ||    
T  8670484 tgcggcgttgtgttgttagtcatcttgtgcgg---tgtttgatttcgcgacttgtcg--cggtgttcgtttatttcctattgaaagatcggcatcagtca 8670578  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| ||||||||||| ||||||||||| |||||| |||| ||| | |||| | ||| ||||  |||||||||||    
T  8670579 attacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgacttaggatttatcatatt 8670662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 443
Target Start/End: Complemental strand, 48351291 - 48351159
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    |||||||||||| ||| |||||| |   |||||||||||||| ||||||    |||||||||||| |||  ||||||||||||| |||||| ||||||||    
T  48351291 gttgtgttgtttatcgtcttgtgggc--ttgtttgatttcgcgtcttgtca--cggtgttcgtttggtttatattgaaagatcagcttcagtcaatcaca 48351196  T
Q  407 gattcaatcaatgatttggacgtcaacgttgcagatc 443  Q
     |||||| | ||||||||||||||  |||||||||||    
T  48351195 tattcaacctatgatttggacgtccgcgttgcagatc 48351159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 444
Target Start/End: Original strand, 53811027 - 53811165
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||| ||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||| ||| |||  |||| |||||||||||| || |||| ||    
T  53811027 tgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcg--cggggtttgttcagttcctattgaaagatctacatcagtca 53811121  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || ||| |||||| ||||||||||||||||||||||||||||||    
T  53811122 attacaaattcaaccaatgatttggacgtcaacgttgcagatcc 53811165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 484
Target Start/End: Complemental strand, 56040700 - 56040578
Alignment:
Q  362 gtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcatttt 461  Q
    ||||| |||| |||| ||||| |||||| || |||| |||| ||| |||||| ||||||||||| || |||||||||||||||| ||| ||||| ||||     
T  56040700 gtgtttgtttagttcctattggaagatctacatcagtcaattacaaattcaaccaatgatttgggcggcaacgttgcagatccagaagcatgggtatttc 56040601  T
Q  462 gatgatttagattttatcatatt 484  Q
    | ||| |||| ||||||||||||    
T  56040600 ggtgacttaggttttatcatatt 56040578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 444
Target Start/End: Complemental strand, 6155357 - 6155198
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttatt 381  Q
    ||||||||||||||||   ||||| ||||||||||  |||  |||||||| |||||||||||||||  | |||| |  | ||||||||||  ||| ||||    
T  6155357 cgtgatttcgtcgtctgagtgcggtgttgtgttgtc-gtcatcttgtgcgtcgttgtttgatttcgtgttttgtcg--cagtgttcgtttgattcatatt 6155261  T
Q  382 gaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||  ||||| ||||||||  ||||||| ||||||| ||||| ||||||||||||||    
T  6155260 gaaagatcagtttcagtcaatcacatgttcaatcgatgatttagacgtaaacgttgcagatcc 6155198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 425
Target Start/End: Complemental strand, 52060978 - 52060914
Alignment:
Q  361 ggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttgg 425  Q
    |||||||||||  ||| |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  52060978 ggtgttcgtttaattcctattgaaagatcaacttcagtcaattacagattcaatcaatgatttgg 52060914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 443
Target Start/End: Complemental strand, 52934057 - 52933916
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtg-ttcgtttcgttcttattgaaagatcaacttcagac 399  Q
    ||||||||||||||||| |||   ||||||  |||||||||||||||||||||||  ||||||| ||  |||  ||| ||||||||||||| |||||  |    
T  52934057 tgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgt--tgcggtgcttattttgattcatattgaaagatcagcttcaatc 52933960  T
Q  400 aatcacagattcaatcaatgatttggacgtcaacgttgcagatc 443  Q
     |||| ||||||||||||| ||||||||| |||| || ||||||    
T  52933959 gatcaaagattcaatcaataatttggacgacaacatttcagatc 52933916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 443
Target Start/End: Complemental strand, 56156770 - 56156615
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   || |||||||||||||| |||| |||||| | ||||   ||||||||| |||||| |  |||||||||||| |||| | |||    
T  56156770 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgtcg--cggtgttcgtttagttcctcttg 56156676  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    |||||| ||| |||| |||| ||| |||||| |||||||| || ||||||| |||||||||    
T  56156675 aaagattaacatcagtcaattacaaattcaaccaatgattggggcgtcaacattgcagatc 56156615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 338 - 484
Target Start/End: Complemental strand, 12199769 - 12199625
Alignment:
Q  338 tttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttg 437  Q
    |||||||| || ||||||||  |||||||||||| |||| |||||||| ||||||||||| || | |||||||||||||| ||||||  |||| |||||     
T  12199769 tttgattttgcgtcttgttg--cggtgttcgtttagttcatattgaaatatcaacttcagtcagttacagattcaatcaaagatttgagcgtcgacgtta 12199672  T
Q  438 cagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||| |  ||| ||| | ||||||  || ||||| |||||||||||    
T  12199671 cagattcggaagcatgagaattttggcgacttagaatttatcatatt 12199625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 10258953 - 10258828
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    ||||||||||||| |||| | |||||||||| || | || |||| ||| |||||||||||||||||| || |||||||||| | ||  ||| |||   ||    
T  10258953 gcggtgttcgtttagttcatgttgaaagatcgacattagtcaattacaaattcaatcaatgatttgggcgccaacgttgcatacccggaagcatgaatat 10258854  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    |||| ||| |||||||||||||||||    
T  10258853 tttggtgacttagattttatcatatt 10258828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 444
Target Start/End: Complemental strand, 26633799 - 26633643
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| | |||   || ||||| |||||| |  | ||||| |||  |||| |||||    
T  26633799 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcattg---gacttcgcgtcttgtcg--cagtgtttgttcagttcctattg 26633705  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| | || ||| |||||| |||||||||||||||||| |||||||||||    
T  26633704 aaagatctacatcagtcgattacaaattcaaccaatgatttggacgtcaatgttgcagatcc 26633643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 444
Target Start/End: Complemental strand, 38166307 - 38166202
Alignment:
Q  336 tgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgt 435  Q
    ||||||||||| |||||| |||||  ||||| ||||  ||  ||||||||||||||||| ||  ||||| |||||||| ||||||||||||| |||||||    
T  38166307 tgtttgatttcacatcttattgtg--gtgtttgtttgatttatattgaaagatcaactt-agttaatcatagattcaagcaatgatttggacatcaacgt 38166211  T
Q  436 tgcagatcc 444  Q
    |||||||||    
T  38166210 tgcagatcc 38166202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 484
Target Start/End: Original strand, 55227981 - 55228155
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    ||||||||||||||| ||||||| |||||||| ||||| || | || |||  ||||||||||||  ||| |||| | | ||||||||| | ||||||| |    
T  55227981 ttgtgttgtttgtcgtcttgtgcaacgttgttagattttgcgttttattg--cggtgttcgtttgattcctattaacaaatcaacttcggtcaatcacgg 55228078  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||  ||||||||||||  ||||||||||| | |||| |||| ||| |  || |  |||||||||||| ||||||||    
T  55228079 atttcatcaatgatttgcgcgtcaacgttgtatatccgaaagcatgagtgttctcgtgatttagatttaatcatatt 55228155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 444
Target Start/End: Complemental strand, 19853568 - 19853484
Alignment:
Q  360 cggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| |||  |||| |||||||||||| || |||  |||| ||| |||||| ||||||||||||||||||||||||||||||    
T  19853568 cggtgtttgttcagttcctattgaaagatctacatcactcaattacaaattcaaccaatgatttggacgtcaacgttgcagatcc 19853484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 444
Target Start/End: Complemental strand, 24099194 - 24099039
Alignment:
Q  286 tgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattga 383  Q
    ||||||||||||||   |||||| || ||||||| |||| |||||||| || |   ||||||||| |||||| |  ||| ||| |||  |||| ||||||    
T  24099194 tgatttcgtcgtctaagtgcggcattttgttgttcgtcgtcttgtgcggcgat---tgatttcgcgtcttgtcg--cggagtttgttcagttcctattga 24099100  T
Q  384 aagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||| || |||  |||| ||| |||||| ||||||||||||||||||||||||||||||    
T  24099099 aagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcc 24099039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 396
Target Start/End: Complemental strand, 35395783 - 35395690
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttca 396  Q
    ||||||||||||||||| |||| ||||| |||||||||||||| | |  ||||||   |||| ||||||||  |||||||||||||||||||||||    
T  35395783 tgcggcgttgtgttgttcgtcgtcttgttcgacgttgtttgatctagtgtcttgt--cgcggcgttcgtttgtttcttattgaaagatcaacttca 35395690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 432
Target Start/End: Original strand, 4937855 - 4937958
Alignment:
Q  327 gtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttgga 426  Q
    ||||| |||||||||||||  ||||||||||  ||| ||||||||  || ||||||||||||||||||||| | || | | |||||||||||||||| |     
T  4937855 gtgcggcgttgtttgattttacatcttgttg--cggagttcgtttgatttttattgaaagatcaacttcagtcgattataaattcaatcaatgatttagg 4937952  T
Q  427 cgtcaa 432  Q
    ||||||    
T  4937953 cgtcaa 4937958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 448
Target Start/End: Original strand, 37030337 - 37030402
Alignment:
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaa 448  Q
    ||||||||||||||  |||  |||||||||||||||||||||||| || |||||||||||| ||||    
T  37030337 aaagatcaacttcaatcaaatacagattcaatcaatgatttggacatcgacgttgcagatcgaaaa 37030402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 33921032 - 33921231
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| | || ||| |||||||||   ||||||| | |||||| |  | |||||||||| |||| |||||    
T  33921032 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgccgtcttatgcgacgtt---tgatttcacgtcttgtcg--cagtgttcgtttagttcctattg 33921126  T
Q  383 aaagatcaacttcagacaatcacaga----ttcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttat 478  Q
    ||||||| || || | |||| ||| |    |||||||||| |||||  ||||||||||||||||||  ||| ||||| ||||   ||| |||||||||||    
T  33921127 aaagatcgacatc-gtcaattacaaacaaattcaatcaataatttgagcgtcaacgttgcagatccggaagcatgggtatttcagtgacttagattttat 33921225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 484
Target Start/End: Original strand, 43853549 - 43853620
Alignment:
Q  413 atcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||| ||||||||||||||||| |  ||| ||| | |||  |||||||||||||||||||||||    
T  43853549 atcaatgatttgtacgtcaacgttgcagattcggaagcatgcgtattaagatgatttagattttatcatatt 43853620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 307 - 394
Target Start/End: Original strand, 7393272 - 7393358
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgtt-gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaactt 394  Q
    ||||||||| | |||| ||||| |||| || |||||||||| ||||||||||||  ||||||||||  ||| |||||||||||||||||    
T  7393272 gttgtgttgctcgtcgtcttgttcgacatttgtttgatttcacatcttgttgtg--gtgttcgtttgattcctattgaaagatcaactt 7393358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 484
Target Start/End: Original strand, 53444170 - 53444295
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| ||||  ||| ||||||||||||  | |||| |||| ||| |||||| ||||||||||| |||||| |||| ||||||  ||| ||| | ||    
T  53444170 gcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaatgttgaagatccggaagcatgtgaat 53444269  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||| ||||||||||||    
T  53444270 ttcggtgacttaggttttatcatatt 53444295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 9713827 - 9713863
Alignment:
Q  223 ctttctttcaatctaaataagtgatttccatatatat 259  Q
    |||||||||||||||||||||||||||||| ||||||    
T  9713827 ctttctttcaatctaaataagtgatttccacatatat 9713863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 35964965 - 35964929
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  35964965 attcaatcaaagatttggacgtcaacgttgcagatcc 35964929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 484
Target Start/End: Original strand, 36700377 - 36700453
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||| ||||||||||||| |||   |||  |||| |||| ||||| ||| |||||||||||||    
T  36700377 attcaatcaatgatttgggcgtcaacgttgcaaatctggaagcgtgggtatttcgatgacttaaattttatcatatt 36700453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 484
Target Start/End: Original strand, 45418613 - 45418689
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||| | |||||||||||||||| |||| |   | |||| | ||| |||||||||||||||||    
T  45418613 attcaatcaatgatttgggcatcaacgttgcagatccgaaagcactagtatttcggtgacttagattttatcatatt 45418689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 389
Target Start/End: Original strand, 4643876 - 4643952
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatc 389  Q
    ||||||| |||| |||||||| |||||||||||||| | |||  ||||||||||||| |||  ||| ||||||||||||    
T  4643876 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtct--ttgtgcggtgttcatttgattcatattgaaagatc 4643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 263
Target Start/End: Original strand, 4937752 - 4937791
Alignment:
Q  224 tttctttcaatctaaataagtgatttccatatatattaag 263  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  4937752 tttcgttcaatctaaataagtgattttcatatatattaag 4937791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 443
Target Start/End: Original strand, 9178385 - 9178489
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| |||||| |  || ||||||||| |||| |||||||||||| || |||  |||| ||| || |||||||| |||||  | ||||||||    
T  9178385 gtttgatttcgcgtcttgtcg--cgttgttcgtttagttcctattgaaagatcgacatcaatcaattacaaatccaatcaataatttgagcatcaacgtt 9178482  T
Q  437 gcagatc 443  Q
    |||||||    
T  9178483 gcagatc 9178489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 26090970 - 26090891
Alignment:
Q  360 cggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgca 439  Q
    |||||||||||| |||| | |||||||||| || |||| |||| | | ||||||  |||||||||| |||||||||||||    
T  26090970 cggtgttcgtttagttcatcttgaaagatcgacatcagtcaattataaattcaactaatgatttgggcgtcaacgttgca 26090891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 28857292 - 28857338
Alignment:
Q  218 tttctctttc-tttcaatctaaataagtgatttccatatatattaag 263  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||    
T  28857292 tttctctttcctttcaatccaaataagtgatttccacatatattaag 28857338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 29965653 - 29965728
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagat 388  Q
    ||||||| |||| |||||||| |||||||||||||| | |||  ||||||||||||| |||  ||| |||||||||||    
T  29965653 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtct--ttgtgcggtgttcatttgattcatattgaaagat 29965728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 483
Target Start/End: Original strand, 43095634 - 43095804
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    |||||||||| |||| |||||   ||| ||||||||||||| ||||||    || ||||| ||| |||| ||||| |||||| || |||| |||| |||     
T  43095634 ttgtgttgttagtcgtcttgt---acggtgtttgatttcgcgtcttgtca--cgatgttcatttagttcctattggaagatcgacatcagtcaattacaa 43095728  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatat 483  Q
     || |||||||||||||| |||||||  |||||||||  ||| ||| | ||||   ||| ||||||||||||||||    
T  43095729 gttaaatcaatgatttggccgtcaacagtgcagatccggaagcatgagaatttcactgacttagattttatcatat 43095804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 868180 - 868258
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaa 391  Q
    ||||||| |||| |||||||| |||||||||||||| | |||| |  |||||||||| |||  ||| ||||||||||||||    
T  868180 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttct--tgcggtgttcatttgattcatattgaaagatcaa 868258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 43444325 - 43444366
Alignment:
Q  218 tttctctttctttcaatctaaataagtgatttccatatatat 259  Q
    ||||||||| |||||||||||||||||||||| || ||||||    
T  43444325 tttctctttatttcaatctaaataagtgattttcacatatat 43444366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 43510178 - 43510373
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||||||||||||| ||||||| |||||||| ||||   ||||||||  | |||| |  ||||||| |||   ||| | |||    
T  43510178 gtgatttcgtcgtctaagtgcggcgttgtgttatttgtcgtcttgtgcggcgtt---tgatttcgtgttttgtcg--cggtgtttgttcaattcctcttg 43510272  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||| || | ||| ||| ||  ||||||||||||||||| |||||||||||  ||| ||||| |||| | ||| |||  ||||||||||    
T  43510273 aaagatctacatcagtcatt-acaaattaaactaatgatttggacgtcaatgttgcagatcctgaagcatgggtatttcggtgacttaagttttatcata 43510371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 484
Target Start/End: Original strand, 44596763 - 44596837
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||  |||||||||||||| ||| | |||  || || |||| ||||||||| |||||||||||||    
T  44596763 attcaatcaatgatt--gacgtcaacgttgctgattcgaaaacataggtatttcgatgatttacattttatcatatt 44596837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 385
Target Start/End: Complemental strand, 46991203 - 46991129
Alignment:
Q  309 tgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaa 385  Q
    |||||||||||||| ||| || | |||||||||||||| ||||||||  |||||||||| |||  ||| ||||||||    
T  46991203 tgtgttgtttgtcgtcttctgtggcgttgtttgatttcccatcttgt--tgcggtgttcatttgattcatattgaaa 46991129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 47158142 - 47158183
Alignment:
Q  218 tttctctttctttcaatctaaataagtgatttccatatatat 259  Q
    |||| |||||||||||| ||||||||||||||||| ||||||    
T  47158142 tttcactttctttcaatttaaataagtgatttccacatatat 47158183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 391
Target Start/End: Complemental strand, 53616721 - 53616643
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaa 391  Q
    ||||||| |||| |||||||| |||||||||||||| | |||  | ||||||||||| |||  ||| ||||||||||||||    
T  53616721 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtct--tcgtgcggtgttcatttgattcatattgaaagatcaa 53616643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 357
Target Start/End: Complemental strand, 18138986 - 18138938
Alignment:
Q  309 tgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttg 357  Q
    ||||||||| |||| |||||||| |||||||||||||  ||||||||||    
T  18138986 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttg 18138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 484
Target Start/End: Complemental strand, 21554798 - 21554722
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||||||||| |||||||  ||| ||||||||||| ||| | ||| |||| ||||  |||||||| ||||    
T  21554798 attcaatcaatgatttgaacgtcaatattgtagatccaaaaggatgagtattctgatcattttaattttatcttatt 21554722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 37188585 - 37188549
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  37188585 attcaatcaaagatttgggcgtcaacgttgcagatcc 37188549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 42032634 - 42032578
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttg 357  Q
    ||||||||| | |||||  ||| ||||||||| ||||||||||||||| ||||||||    
T  42032634 tgcggcgttattttgttaatcgtcttgtgcgatgttgtttgatttcgcgtcttgttg 42032578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 43353658 - 43353595
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgattt 345  Q
    |||||||||||||||||  |||||| || ||||||| |||| |||||| | |||||||||||||    
T  43353658 cgtgatttcgtcgtctcggtgcggctttatgttgttcgtcgtcttgtgtgtcgttgtttgattt 43353595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 44947511 - 44947547
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  44947511 attcaatcaaagatttgggcgtcaacgttgcagatcc 44947547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 47320497 - 47320449
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgtt 356  Q
    |||||||||| |||| |||||||| ||||||||||||| |||| |||||    
T  47320497 ttgtgttgttcgtcgtcttgtgcggcgttgtttgatttggcatattgtt 47320449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 357
Target Start/End: Complemental strand, 49126199 - 49126151
Alignment:
Q  309 tgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttg 357  Q
    ||||||||| |||| |||||||| |||||||||||||  ||||||||||    
T  49126199 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttg 49126151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 49410322 - 49410358
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  49410322 attcaatcaaagatttgggcgtcaacgttgcagatcc 49410358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 3e-58; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 14211179 - 14211383
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| | |||||||||| |||| |||||||| |||||||||||||||||||  |||||||||||||||||||| |||| ||    
T  14211179 cgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgta 14211278  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| ||||| ||| || |||||||||||| |||    
T  14211279 ttgaaagatcagcttcagacaatcacaaatgcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatc 14211378  T
Q  480 atatt 484  Q
    |||||    
T  14211379 atatt 14211383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 28541023 - 28540838
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcaga 398  Q
    |||| |||||||||||| |||| |||||||| |||||||||||||||||||  |||||||| ||||||||||| |||| ||||||||||| | |||||||    
T  28541023 tgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcatttgttgtgtggtgttcgtttggttcgtattgaaagattagcttcaga 28540924  T
Q  399 caatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||| |||||||||||| ||||||||    
T  28540923 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattttggtgatttagatttcatcatatt 28540838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 2979442 - 2979238
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||||||||| |||| |||||||| |||||||| ||| ||||||  || ||||||||||||||||| |||| ||    
T  2979442 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttcattccgcatccttttttgtgcggtgttcgtttggttcgta 2979343  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    || |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||| | ||| ||| || |||||||||||| |||    
T  2979342 ttaaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcacgggtattctggtgatttagatttcatc 2979243  T
Q  480 atatt 484  Q
    |||||    
T  2979242 atatt 2979238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 308 - 484
Target Start/End: Complemental strand, 8088317 - 8088144
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    ||||||||||| ||| |||||||| ||||||||||||| |||||||||||  | |||||||||  |||| ||||||||||||| |||||| |||||||||    
T  8088317 ttgtgttgtttatcgtcttgtgcggcgttgtttgatttggcatcttgttg--cagtgttcgttg-gttcatattgaaagatcagcttcagtcaatcacag 8088221  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||||||||||||||||||||||||||  | | | ||| || ||||||||||| |||||||||    
T  8088220 attcaatcaatgatttggacgtcaacgttgcagatccaaaaacaagagtattctggtgatttagattatatcatatt 8088144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 19103603 - 19103399
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||||||||| |||| |||||||| |||||||||||||| ||||  ||||||||||||||||||||  ||| ||    
T  19103603 cgtgatttcgtcgtcttagtgcgacgttgtgttgttagtcgtcttgtgcggcgttgtttgatttcacatcatttgttgtgcggtgttcgtttgattcgta 19103504  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    | ||||||| | ||||||||||||||| |||||||||||||||||| ||||||  ||||||||||| ||| ||| | |||  | |||||||||||| |||    
T  19103503 tcgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatattgcagatccagaagcatgagtattccggtgatttagatttcatc 19103404  T
Q  480 atatt 484  Q
    |||||    
T  19103403 atatt 19103399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 38597757 - 38597953
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||| |||||| |||  ||||| |||  |||| |||||    
T  38597757 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgtg--gtgtttgttcagttcctattg 38597851  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||||||||||  ||| ||||| ||||   ||| |||| ||||||||||    
T  38597852 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaggttttatcata 38597951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 379 - 484
Target Start/End: Original strand, 39567321 - 39567426
Alignment:
Q  379 attgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttat 478  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||  ||||| ||| || |||||||||||| ||    
T  39567321 attgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacattgcagatccagaaacatgggtattctggtgatttagatttcat 39567420  T
Q  479 catatt 484  Q
    ||||||    
T  39567421 catatt 39567426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 360 - 484
Target Start/End: Original strand, 10722793 - 10722917
Alignment:
Q  360 cggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcatt 459  Q
    |||||||||||| |||| |||||||||||| ||||||| || | | | |||||||||||||||||| ||||||||||| ||||||||||| ||||| |||    
T  10722793 cggtgttcgtttagttcctattgaaagatcgacttcagtcatttaaaaattcaatcaatgatttgggcgtcaacgttgtagatccaaaagcatgggtatt 10722892  T
Q  460 ttgatgatttagattttatcatatt 484  Q
    | | ||| |||||||||||||||||    
T  10722893 tcggtgacttagattttatcatatt 10722917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 444
Target Start/End: Complemental strand, 35921097 - 35920968
Alignment:
Q  313 ttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattca 412  Q
    ||||| |||| ||| || |||||||||||||||||| ||||||||  |||||||| |||  ||| |||| ||||||||| ||||  ||||||||||||||    
T  35921097 ttgttcgtcgtcttatgagacgttgtttgatttcgcgtcttgttg--cggtgttcatttgtttcctattaaaagatcaaattcaatcaatcacagattca 35921000  T
Q  413 atcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||||| |||||||||||||||||||    
T  35920999 atcaatgatttgaacgtcaacgttgcagatcc 35920968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 14726589 - 14726393
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||| ||||||||||| |||| |||||||||   ||||||||||||| ||||||    ||||||| ||||  |||||||||    
T  14726589 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcga---tgtttgatttcgcgtcttgtca--cggtgttagtttatttcttattg 14726495  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||||||  | |||| |||||||| |||||| |||||||||||  |||||||||| ||||||  ||| ||| | |||||| ||| |||| ||||||||||    
T  14726494 aaagatcggcatcagtcaatcacaaattcaaccaatgatttgggtgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggttttatcata 14726395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 360 - 484
Target Start/End: Original strand, 41630534 - 41630658
Alignment:
Q  360 cggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcatt 459  Q
    |||||||||||| |||| |||| ||||||| ||||||| |||| ||| |||||||||||||||||| ||||||||||||| ||||| ||| ||| | |||    
T  41630534 cggtgttcgtttagttcctattaaaagatcgacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcacatccagaagcatgtgtatt 41630633  T
Q  460 ttgatgatttagattttatcatatt 484  Q
    |   ||| |||||||||||||||||    
T  41630634 tccgtgacttagattttatcatatt 41630658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 13007189 - 13007385
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   |||||| |  | |||| |  ||||||| |||| |||| | |||    
T  13007189 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgtgttttgtcg--cggtgtttgtttagttcctcttg 13007283  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||||||||||  ||| ||||| |||| | ||| |||  ||||||||||    
T  13007284 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcata 13007383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 26878165 - 26878040
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||||||||  ||  | |||||||||| || |||| |||| | | |||||||||||||||||| ||||||| ||||||||||| ||| ||||| ||    
T  26878165 gcggtgttcgtttaatttctcttgaaagatcgacatcagtcaattagatattcaatcaatgatttgggcgtcaacattgcagatccagaagcatgggtat 26878066  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    |||| ||| |||||||||||||||||    
T  26878065 tttggtgacttagattttatcatatt 26878040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 31391881 - 31391685
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||| ||||||||||||  ||| |||||||| | ||   |||||||||||||||| |  | ||||| |||| ||| ||||||    
T  31391881 gtgatttcgtcgtctaagtgcgacgttgtgttgttcttcgtcttgtgcggcatt---tgatttcgcatcttgtcg--cagtgtttgtttagtttttattg 31391787  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||||||  | |||| |||| ||| |||||| ||||||||||| ||||||||||||||||||| ||| ||| | |||| | ||| |||| ||||||||||    
T  31391786 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccagaaggatgagtatttcggtgacttaggttttatcata 31391687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 484
Target Start/End: Complemental strand, 10332656 - 10332479
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcac 405  Q
    ||||||||||||||||| |||||||| | |||||||||||||| ||||||  ||| ||||| ||||  ||| ||||||||||| |   |||| |||||||    
T  10332656 cgttgtgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgt--tgcagtgtttgtttgattcatattgaaagattaggctcagtcaatcac 10332559  T
Q  406 agattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatga-tttagattttatcatatt 484  Q
    | |||| ||| ||||||| |||  |||||||||||||||  ||| ||| | ||| |||||| ||||||||| ||||||||    
T  10332558 atattcgatcgatgatttagacaccaacgttgcagatccggaagcatgagtattctgatgattttagatttcatcatatt 10332479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 444
Target Start/End: Complemental strand, 24229894 - 24229756
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||| ||||||| |||| |||||| ||||||   ||||||||| |||||| |  ||||||| |||| |||| |||||||||||| || |||  ||    
T  24229894 tgcggcgttttgttgttcgtcgtcttgtgtgacgtt---tgatttcgcgtcttgtcg--cggtgtttgtttagttcctattgaaagatctacatcaatca 24229800  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || ||| |||||| |||||||||||||||||| |||||||||||    
T  24229799 attacaaattcaagcaatgatttggacgtcaatgttgcagatcc 24229756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 424
Target Start/End: Complemental strand, 37986223 - 37986105
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||||||||||||||  ||| |||||||| ||||   ||||||||||||||||||  ||| ||||||||  |||||||||||||||||||||  | ||    
T  37986223 tgcggcgttgtgttgttcatcgtcttgtgcggcgtt---tgatttcgcatcttgttg--cggcgttcgtttgattcttattgaaagatcaacttttgtca 37986129  T
Q  401 atcacagattcaatcaatgatttg 424  Q
     | |||||||||||||||||||||    
T  37986128 tttacagattcaatcaatgatttg 37986105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 7036179 - 7036375
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||||||| |||||  | |||| |||||||| ||||   ||||||||| ||||||  ||  |||||||||| |||| | ||     
T  7036179 gtgatttcgtcgtctgattgcggcgtggtgttagtggtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcatg--gtgttcgtttagttcatgtta 7036273  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || | || |||| ||| ||| |||| ||||||||| |||||||||||||||||| |||| ||||| |||| || || |||||||||||||||    
T  7036274 aaagatcgacataagtcaattacaaattgaatctatgatttgggcgtcaacgttgcagatccgaaagcatgggtatttcgaggacttagattttatcata 7036373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 484
Target Start/End: Original strand, 34945424 - 34945549
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| |||  |||| |||||||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||||||||||  ||| ||||| ||    
T  34945424 gcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtat 34945523  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||  ||||||||||||    
T  34945524 ttcggtgacttaagttttatcatatt 34945549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 444
Target Start/End: Complemental strand, 9113853 - 9113697
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||| ||||||| |||| |||||||| ||||   ||||||| | | |||| |  ||||||| |||  |||| | |||    
T  9113853 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcggcgtt---tgatttcacgttttgtcg--cggtgtttgttcagttcctcttg 9113759  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||||||||||    
T  9113758 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatcc 9113697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 444
Target Start/End: Original strand, 7930155 - 7930293
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||| ||||   ||||||||||||| || |  | ||||| |||| |||| ||| |||||||| || |||| ||    
T  7930155 tgcggcgttgtgttgttcgtcgtcttgtgcgtcgtt---tgatttcgcatctggtcg--cagtgtttgtttagttcctatggaaagatcgacgtcagtca 7930249  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || ||| |||||| ||||||||||  |||||| |||||||||||    
T  7930250 attacaaattcaaccaatgatttgagcgtcaatgttgcagatcc 7930293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 460
Target Start/End: Complemental strand, 11074006 - 11073856
Alignment:
Q  305 gcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatca 404  Q
    ||||||| ||||| |||| |||||||| ||||   ||||||||| |||||| |  ||||||| |||  |||| |||||||| ||| || |||  |||| |    
T  11074006 gcgttgttttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcg--cggtgtttgttcagttcctattgaaatatctacatcaatcaatta 11073912  T
Q  405 cagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattt 460  Q
    || |||||| |||||||||||||||||||||| ||||||| |||| ||||| ||||    
T  11073911 caaattcaagcaatgatttggacgtcaacgttacagatccgaaagcatgggtattt 11073856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 484
Target Start/End: Original strand, 13421967 - 13422089
Alignment:
Q  362 gtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcatttt 461  Q
    |||||| ||| |||| |||||||||||| || |||| |||| ||| |||||||||||||||||| |||||| ||||||||| |  ||| ||| | ||||     
T  13421967 gtgttcatttagttcctattgaaagatcgacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagattctgaagcatgtgtatttc 13422066  T
Q  462 gatgatttagattttatcatatt 484  Q
    | ||| ||| |||||||||||||    
T  13422067 ggtgacttatattttatcatatt 13422089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 442
Target Start/End: Original strand, 25980143 - 25980272
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    |||||||||| |||| |||||||| ||||   | ||||||| |||||| |  ||||||| |||| |||| ||||||||||||||| |||| |||  |||     
T  25980143 ttgtgttgttcgtcgtcttgtgcggcgtt---taatttcgcgtcttgtcg--cggtgtttgtttagttcctattgaaagatcaacatcagtcaactacaa 25980237  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagat 442  Q
    |||||| ||||||||||| |||||| |||||||||    
T  25980238 attcaaccaatgatttgggcgtcaaagttgcagat 25980272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 442
Target Start/End: Original strand, 32691019 - 32691084
Alignment:
Q  377 ttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagat 442  Q
    |||||||||||||||| | || ||||||||  ||||||||||||||||||||||||||||| ||||    
T  32691019 ttattgaaagatcaaccttagtcaatcacatgttcaatcaatgatttggacgtcaacgttgaagat 32691084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 444
Target Start/End: Complemental strand, 6012248 - 6012110
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| ||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| |||  |||| |||| ||||||| || |||| ||    
T  6012248 tgcggtgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcg--cggtgtttgttcagttcctattaaaagatctacatcagtca 6012154  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || ||| |||||| |||||||||||||||||| |||| ||||||    
T  6012153 attacaaattcaaccaatgatttggacgtcaatgttgtagatcc 6012110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 378 - 484
Target Start/End: Original strand, 6216948 - 6217054
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    |||||||||||| || |||  |||| ||| |||||||||||||||||| |||||||||||||||| |  ||| ||| | |||| | ||| ||| ||||||    
T  6216948 tattgaaagatctacatcaatcaattacaaattcaatcaatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttcggtgacttaaatttta 6217047  T
Q  478 tcatatt 484  Q
    |||||||    
T  6217048 tcatatt 6217054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 484
Target Start/End: Original strand, 35850830 - 35850955
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| ||||  ||| ||||||||||||  | |||| |||| ||| |||||| ||||||||||  ||||||||||| ||||||| ||| ||| | ||    
T  35850830 gcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgtgcgtcaacgttgaagatccagaagcatgtgaat 35850929  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||| ||||||||||||    
T  35850930 ttcggtgacttaggttttatcatatt 35850955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 484
Target Start/End: Original strand, 38007389 - 38007514
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| ||||  ||| ||||||||||||  | |||| |||| ||| ||| || ||||||||||||||||||||||| ||||||  ||| ||| | ||    
T  38007389 gcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatttaaccaatgatttggacgtcaacgttgaagatccggaagcatgtgaat 38007488  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||| ||||||||||||    
T  38007489 ttcggtgaattaggttttatcatatt 38007514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 430
Target Start/End: Original strand, 41749335 - 41749428
Alignment:
Q  335 ttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtc 430  Q
    |||||||||||| ||||||||||  | ||||||||||  ||| |||||| ||| ||||||||  ||||  ||||||||||||||||||| ||||||    
T  41749335 ttgtttgatttcacatcttgttg--cagtgttcgtttgattcctattgagagaccaacttcaatcaattccagattcaatcaatgatttagacgtc 41749428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 10332740 - 10332705
Alignment:
Q  224 tttctttcaatctaaataagtgatttccatatatat 259  Q
    ||||||||||||||||||||||||||||||||||||    
T  10332740 tttctttcaatctaaataagtgatttccatatatat 10332705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 443
Target Start/End: Original strand, 19120888 - 19121027
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| ||| || | | |||||||||||||| ||||||  ||||||||| ||||  ||| | ||| ||||||| |||||| ||    
T  19120888 tgcggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgt--tgcggtgtttgtttgtttccttttg-aagatcagcttcagtca 19120984  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    || ||| |||| |||||||| ||   |||||||| ||||||||    
T  19120985 attacaaattctatcaatgacttaagcgtcaacgctgcagatc 19121027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 38111055 - 38110940
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    |||||||||||||| | |||||||| ||||||||||||| |  ||||||  ||| ||||| |||| |||| |||||||| ||||| || || |||||| |    
T  38111055 gttgtgttgtttgttgtcttgtgcggcgttgtttgattttgtgtcttgt--tgcagtgtttgtttggttcctattgaaatatcaatttaagtcaatcata 38110958  T
Q  407 gattcaatcaatgatttg 424  Q
     | ||| |||||||||||    
T  38110957 aactcagtcaatgatttg 38110940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 444
Target Start/End: Complemental strand, 8985046 - 8984927
Alignment:
Q  319 gtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaat 418  Q
    |||| |||||| ||| |||||||||| ||| |||||||| ||  |||||||||  ||| ||||||    ||| ||| || |||||||| || ||||| ||    
T  8985046 gtcgtcttgtgtgacattgtttgattccgcgtcttgttgcgc--tgttcgtttgtttcatattga----tcagctttagtcaatcacatatacaatcgat 8984953  T
Q  419 gatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| |||||||||||||||    
T  8984952 gatttggacgacaacgttgcagatcc 8984927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 11977063 - 11976867
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   || |||||||| ||||| |||| ||||| |||||||   ||||||||| |||||| |  ||||||| ||||  ||  |||||    
T  11977063 gtgatttcgtcgtctaagtgtggcgttgtattgttcgtcgtcttgtacgacgtt---tgatttcgcgtcttgtcg--cggtgtttgtttattttctattg 11976969  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    | |||||  | |||| |||| ||| |||||| ||||||||||||||| ||||||| |||||   ||| ||| | |||| | ||| |||| ||||||||||    
T  11976968 agagatcggcatcagtcaattacaaattcaaccaatgatttggacgtgaacgttgaagatctggaagcatgtgaatttcggtgacttaggttttatcata 11976869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 444
Target Start/End: Original strand, 15571521 - 15571602
Alignment:
Q  363 tgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||||| |||  |||||||||||| |||| ||  ||  ||| ||||||||||||||||||  |||||||||||||||||    
T  15571521 tgttcgtttagttactattgaaagatcgactttagtaaactacaaattcaatcaatgatttgggtgtcaacgttgcagatcc 15571602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 28235593 - 28235671
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaa 391  Q
    |||||| ||||| |||||||| |||||||||||||  |||||| |  |||||||||| |||  ||||||||||||||||||    
T  28235593 tgttgtctgtcgtcttgtgcggcgttgtttgattttccatcttct--tgcggtgttcattttattcttattgaaagatcaa 28235671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 7150325 - 7150289
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  7150325 attcaatcaaagatttggacgtcaacgttgcagatcc 7150289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 434
Target Start/End: Original strand, 16758521 - 16758646
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    |||||||||||| ||| | ||||||   || ||||||||||| | |||||   |||||||||||| |||| |||||||| |||    |||| |||||| |    
T  16758521 gttgtgttgtttatcgtcgtgtgcggtcttatttgatttcgcgttttgtta--cggtgttcgtttggttcatattgaaaaatctgtgtcagtcaatcata 16758618  T
Q  407 gattcaatcaatgatttggacgtcaacg 434  Q
    |||||||||||||||||| || ||||||    
T  16758619 gattcaatcaatgatttgaacatcaacg 16758646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 19280935 - 19280899
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  19280935 attcaatcaaagatttggacgtcaacgttgcagatcc 19280899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 447
Target Start/End: Complemental strand, 19259802 - 19259763
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaa 447  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  19259802 attcaatcaaagatttgggcgtcaacgttgcagatccaaa 19259763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 445
Target Start/End: Original strand, 26825408 - 26825547
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||  |||||||| ||||   ||||||||| | |||| |  ||||||| |||  |||| | |||||||||| || |||| ||    
T  26825408 tgcggcgttgtgttgttcgtcttcttgtgcggcgtt---tgatttcgcgttttgtcg--cggtgtttgttcagttcctcttgaaagatctacatcagtca 26825502  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    || ||| |||||| |||||||||| |||   ||||||||||||||    
T  26825503 attacaaattcaaccaatgatttgtacgattacgttgcagatcca 26825547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 442
Target Start/End: Original strand, 4954081 - 4954115
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagat 442  Q
    |||||||||| ||||||||||||||||||||||||    
T  4954081 attcaatcaaagatttggacgtcaacgttgcagat 4954115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 444
Target Start/End: Original strand, 1409533 - 1409614
Alignment:
Q  363 tgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||||| |||| |||| ||||||| || |||  |||| ||| ||||||||||||||||   |||||| |||||||||||    
T  1409533 tgttcgtttagttcatattaaaagatcgacatcaatcaattacaaattcaatcaatgatttatgcgtcaatgttgcagatcc 1409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 1582204 - 1582147
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgt 358  Q
    |||| |||||||| |||||||| |||||||| |||||||||||||  | |||||||||    
T  1582204 tgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 1582147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 1602611 - 1602668
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgt 358  Q
    |||| |||||||| |||||||| |||||||| |||||||||||||  | |||||||||    
T  1602611 tgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttgt 1602668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 389
Target Start/End: Complemental strand, 7613131 - 7613053
Alignment:
Q  309 tgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatc 389  Q
    ||||||||| |||| ||||||| | ||||||||||||| | ||||||  |||||||||| |||  ||| ||||||||||||    
T  7613131 tgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgt--tgcggtgttcatttgattcatattgaaagatc 7613053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 34881726 - 34881804
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaa 391  Q
    ||||||| |||| |||||||| |||||||||||||| | |||  | ||||||||||| |||  ||| ||||||||||||||    
T  34881726 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtct--tcgtgcggtgttcatttgattcatattgaaagatcaa 34881804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 39567273 - 39567322
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcat 350  Q
    |||| |||||||||||| || | |||||||| ||||||||||||||||||    
T  39567273 tgcgacgttgtgttgttcgttgtcttgtgcggcgttgtttgatttcgcat 39567322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 249
Target Start/End: Complemental strand, 2979504 - 2979476
Alignment:
Q  221 ctctttctttcaatctaaataagtgattt 249  Q
    |||||||||||||||||||||||||||||    
T  2979504 ctctttctttcaatctaaataagtgattt 2979476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 21060273 - 21060237
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  21060273 attcaatcaaagatttgggcgtcaacgttgcagatcc 21060237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 34881807 - 34881843
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  34881807 attcaatcaaagatttgggcgtcaacgttgcagatcc 34881843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 41184430 - 41184394
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  41184430 attcaatcaaagatttgggcgtcaacgttgcagatcc 41184394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 42579977 - 42580013
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  42579977 attcaatcaaagatttgggcgtcaacgttgcagatcc 42580013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 90)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 10237353 - 10237149
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||||||||| |||| |||||||  |||| ||||||||||||||||  ||||||| |||||||||| |||| ||    
T  10237353 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcagcgttctttgatttcgcatcttttgttgtgcagtgttcgtttggttcgta 10237254  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||| |||    
T  10237253 ttgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctgatgatttagatttcatc 10237154  T
Q  480 atatt 484  Q
    |||||    
T  10237153 atatt 10237149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 3308908 - 3309112
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| ||||||||| ||||||| |||||||| ||||||||||||| |||||  |||||||||||||||||||| |||  ||    
T  3308908 cgtgatttcgtcgtcttagtgcgacgttgtgttatttgtcgtcttgtgcggcgttgtttgatttagcatcctttgttgtgcggtgttcgtttggtttgta 3309007  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| ||| ||||| ||| || ||||||| |||| |||    
T  3309008 ttgaaatatcaacttcagacaatcacaaattcaatcaatgatttgggcgttaacgttgcagatccagaagcatgggtattctggtgatttatatttcatc 3309107  T
Q  480 atatt 484  Q
    |||||    
T  3309108 atatt 3309112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 285 - 474
Target Start/End: Complemental strand, 32448750 - 32448562
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||| | |||||||||| |||| |||||||| ||||||||||||| |||||||||||  |||||||||||  |||| |||||    
T  32448750 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttg--cggtgttcgttg-gttcatattg 32448654  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatt 474  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | | | ||| || |||||||||||    
T  32448653 aaagatcagcttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagatt 32448562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 325 - 484
Target Start/End: Original strand, 14955535 - 14955696
Alignment:
Q  325 ttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatt 422  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||||| |||| |||||||| |||| ||||||| ||||| | |||||||||||||||    
T  14955535 ttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcatattgaaatatcatcttcagataatcataaattcaatcaatgatt 14955634  T
Q  423 tggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||  ||||||||||||||||||| ||  ||| | ||| ||||||||||||||||||||||||    
T  14955635 tgagcgtcaacgttgcagatccagaaacatgtgtattctgatgatttagattttatcatatt 14955696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 306 - 439
Target Start/End: Complemental strand, 6358982 - 6358849
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcac 405  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||||    
T  6358982 cgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgcatcttgttgtacggtgtttgtttggttcttattgaaagatcaacttcagacagtcac 6358883  T
Q  406 agattcaatcaatgatttggacgtcaacgttgca 439  Q
    | |||||||| || |||||| |||||||||||||    
T  6358882 aaattcaatctataatttgggcgtcaacgttgca 6358849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 10929631 - 10929832
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgttt-gatttcgcatcttgttgtgcggtgttcgtttcgttcttat 380  Q
    ||||||||||||||||   ||||| ||||||||||| |||| ||||| ||||||||||| ||||| || ||||||||  |||||||||||| |||| | |    
T  10929631 cgtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttg--cggtgttcgtttggttcatgt 10929728  T
Q  381 tgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatca 480  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||| | ||| || ||||||| |||||||||    
T  10929729 tgaaaaatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacgttgcagatccggaagcatgtgtattctggtgatttaaattttatca 10929828  T
Q  481 tatt 484  Q
    ||||    
T  10929829 tatt 10929832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 29574742 - 29574561
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||| | |||||||||||| ||| ||||||  | ||||| ||||  ||| ||||||||||| | |||||| ||    
T  29574742 tgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttg--cagtgtttgtttgattcatattgaaagattagcttcagtca 29574645  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||| |||   ||| ||||||||||||||| ||||||||    
T  29574644 atcacagattcaatcaatgatttggacgccaacgttgcagatccggaagcatgaatattatgatgatttagatttcatcatatt 29574561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 308 - 484
Target Start/End: Complemental strand, 17249253 - 17249080
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    |||||||||| |||| |||||||| ||| |||| |||| |||||||||||  ||||||| |||  |||| |||||||||||||  ||||| |||||||||    
T  17249253 ttgtgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttg--cggtgtttgttg-gttcatattgaaagatcagtttcagtcaatcacag 17249157  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||||||||||||||||||||||| ||| | | | ||| || ||||||||||| |||||||||    
T  17249156 attcaatcaatgatttggacgtcaacgttgcagatccataagcaagagtattctggtgatttagattatatcatatt 17249080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 308 - 484
Target Start/End: Complemental strand, 23933726 - 23933552
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    |||||||| |||| | ||||||||  ||||||||| || |||||||||||  |||||||||||| |||||||||||||| |||||||||| |||||||||    
T  23933726 ttgtgttggttgttgtcttgtgcggtgttgtttgaatttgcatcttgttg--cggtgttcgtttggttcttattgaaagttcaacttcagtcaatcacag 23933629  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||| ||||||||||||||||| || |||   ||| ||||  | | || |||||||||||||||||||||    
T  23933628 attcaatcaattatttggacgtcaacgttacatatctggaagcatggataatctggtgatttagattttatcatatt 23933552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 358 - 484
Target Start/End: Original strand, 24461484 - 24461610
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggca 457  Q
    |||||||||||||| |||| |||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||  ||| ||  | |    
T  24461484 tgcggtgttcgtttggttcatattgaaagatcaacttcagtcaaccacagattcaatcgatgatttggacgccaacgttgcagatccggaagcattagta 24461583  T
Q  458 ttttgatgatttagattttatcatatt 484  Q
    ||||| |||||||||||| ||||||||    
T  24461584 ttttggtgatttagatttcatcatatt 24461610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 37416702 - 37416833
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||||||||    |||||| || |||| |||||||| |||||||  || ||||||||    
T  37416702 gttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcacatcttgttgtaa--tgttcggttggttcatattgaaatatcaactcgagtcaatcaca 37416799  T
Q  407 gattcaatcaatgatttggacgtcaacgttgcag 440  Q
    |||||||||||||||||||| |||||| ||||||    
T  37416800 gattcaatcaatgatttggatgtcaacattgcag 37416833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 484
Target Start/End: Complemental strand, 31210735 - 31210540
Alignment:
Q  286 tgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattga 383  Q
    ||||||||||||||   |||||||||||||||||||| | |||||||| ||||   ||||||||| |||| | |||  ||||| |||  |||| ||||||    
T  31210735 tgatttcgtcgtctaagtgcggcgttgtgttgtttgttgtcttgtgcggcgtt---tgatttcgcgtcttatcgtg--gtgtttgttcagttcctattga 31210641  T
Q  384 aagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatat 483  Q
    |||||| || |||  |||| ||| |||||| |||||||||||||||||||||||||||||  |||| ||||| |||| | |||||||| |||||||||||    
T  31210640 aagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcagaaagcatgggtatttcggtgatttaggttttatcatat 31210541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 319 - 484
Target Start/End: Original strand, 14423329 - 14423492
Alignment:
Q  319 gtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaat 418  Q
    |||| |||||||  |||||||||||||| ||| || |||  ||||||| |||| ||||||||||||||||| |||| || |||| ||||||| |||||||    
T  14423329 gtcgtcttgtgcatcgttgtttgatttcacattttattg--cggtgtttgtttggttcttattgaaagatcgactttagtcaattacagatttaatcaat 14423426  T
Q  419 gatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||||||||||||| ||| | ||  ||||| |||| | | | |||||||||||||||||    
T  14423427 gatttggacgtcaacgttgcaaatctagaaacatgggtatttaggttagttagattttatcatatt 14423492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 30400093 - 30400003
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaag 449  Q
    ||||||||||||| |||| |||||||||||||||||||| |||| ||| |||||||||||||||||| |||||||||||||||||| ||||    
T  30400093 gcggtgttcgtttagttcctattgaaagatcaacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcagatccgaaag 30400003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 308 - 439
Target Start/End: Complemental strand, 28534061 - 28533932
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    |||||||||| | || |||||||||||||||||||||||  |||||||||  ||||||||||||  ||| ||||||||||  | |||||  |||||||||    
T  28534061 ttgtgttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttg--cggtgttcgtttgattcctattgaaagacaagcttcactcaatcacag 28533964  T
Q  408 attcaatcaatgatttggacgtcaacgttgca 439  Q
    ||||||| |||||||||||||||||| |||||    
T  28533963 attcaataaatgatttggacgtcaactttgca 28533932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 304 - 484
Target Start/End: Complemental strand, 4904253 - 4904078
Alignment:
Q  304 ggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatc 403  Q
    |||||||||||||| |||| |||||||||||||   |||||| |  ||||||||  |||||||||||| |||| |||||||||||| || |||| ||||     
T  4904253 ggcgttgtgttgttcgtcgtcttgtgcgacgtt---tgattttgtgtcttgttg--cggtgttcgtttggttcatattgaaagatcgacatcagtcaatt 4904159  T
Q  404 acagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||| ||||||   |||||||||  |||||||||||||||||| ||| ||||  |||| | ||| |||||||||||||||||    
T  4904158 acaaattcaactgatgatttgggtgtcaacgttgcagatccagaagcatggatatttcggtgacttagattttatcatatt 4904078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 17151445 - 17151550
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    ||||||||||||||||||||   ||||||||||||  ||| |||||||||||||| ||||| |||| |||||||||||||||||||||| |||| |||||    
T  17151445 gtttgatttcgcatcttgtta--cggtgttcgtttgattcctattgaaagatcaatttcagtcaattacagattcaatcaatgatttgggcgtcgacgtt 17151542  T
Q  437 gcagatcc 444  Q
    | ||||||    
T  17151543 gtagatcc 17151550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 484
Target Start/End: Original strand, 16375980 - 16376106
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggca 457  Q
    |||||| ||||||| |||| |||||||||| |||   ||| || |||||||||||||||||||||| | |||||| ||||||||| |||||| ||| | |    
T  16375980 tgcggtattcgtttggttcctattgaaagaccaaaaccagtcagtcacagattcaatcaatgatttcggcgtcaaagttgcagattcaaaagcatgtgta 16376079  T
Q  458 ttttgatgatttagattttatcatatt 484  Q
    || |||||||||| |||||||||||||    
T  16376080 ttatgatgatttaaattttatcatatt 16376106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 305 - 484
Target Start/End: Complemental strand, 25509175 - 25509001
Alignment:
Q  305 gcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatca 404  Q
    |||||||||||||  ||| |||||||||||||   |||||| |  |||||| |  |||||||||||| ||||  |||||||||||||| |||| |||| |    
T  25509175 gcgttgtgttgttattcgtcttgtgcgacgtt---tgattttgtgtcttgtcg--cggtgttcgtttagttcccattgaaagatcaacatcagtcaatta 25509081  T
Q  405 cagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || |||||||||||||| ||| ||||||||||||| ||||  ||  ||||| |||| ||||| |||||||||||| ||||    
T  25509080 caaattcaatcaatgatctgggcgtcaacgttgcaaatccggaaacatgggtatttcgatgacttagattttatcgtatt 25509001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 442
Target Start/End: Complemental strand, 28871866 - 28871763
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| |||||| |  |||||||||||| |||| |||||||||||||||||||| |||| |||||||||| ||||||||| | |||| |||||    
T  28871866 gtttgatttcgcgtcttgtcg--cggtgttcgtttggttcctattgaaagatcaacttcagtcaattacagattcaaccaatgatttaggcgtcgacgtt 28871769  T
Q  437 gcagat 442  Q
    ||||||    
T  28871768 gcagat 28871763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 36691844 - 36692041
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttatt 381  Q
    ||||||||||||||||   ||||||||| |||||||  |||  | ||||||||||   |||||||||||||||| |  |||||||||||| |||  || |    
T  36691844 cgtgatttcgtcgtctaagtgcggcgttttgttgttcatcgtttagtgcgacgtt---tgatttcgcatcttgtcg--cggtgttcgtttagtttctact 36691938  T
Q  382 gaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    |||||||  || || | |||| ||| |||||| ||||||||||||||||||| |||||||||| |||| ||| | |||| | |||||||| |||||||||    
T  36691939 gaaagattgacatcggtcaattacaaattcaagcaatgatttggacgtcaacattgcagatcctaaagcatgtgaatttcggtgatttaggttttatcat 36692038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 7678002 - 7677806
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||| |||| |    ||||||| |||  |||| |||||    
T  7678002 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttatct--cggtgtttgttcagttcctattg 7677908  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||  |||| ||| |||||| ||||||||||||| |||||||||||||||| |||| ||||| ||||   ||| |||| ||||||||||    
T  7677907 aaagatctacatcaatcaattacaaattcaagcaatgatttggacatcaacgttgcagatccgaaagcatgggtatttccgtgaattaggttttatcata 7677808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 436
Target Start/End: Complemental strand, 36175574 - 36175477
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||| ||| ||||||||  |||||||||||| |||  ||||||||||||||| ||| ||||| ||| |||||||||||||||||||||||||||||    
T  36175574 gtttgattccgcgtcttgttg--cggtgttcgtttggtttctattgaaagatcaacatcaaacaattacatattcaatcaatgatttggacgtcaacgtt 36175477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 378 - 484
Target Start/End: Original strand, 1421737 - 1421843
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    |||||||||||| || |||  |||| ||| |||||| ||||||||||||||||||||||||||||||  ||| ||||| |||| | |||||||| |||||    
T  1421737 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttaggtttta 1421836  T
Q  478 tcatatt 484  Q
    |||||||    
T  1421837 tcatatt 1421843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 37876717 - 37876539
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||| ||||||| |||| |||||||| | ||   ||||||||| |||||| |  ||||||| |||| |||| ||||| |||||| || |||| ||    
T  37876717 tgcggcgttttgttgttcgtcgtcttgtgcggcatt---tgatttcgcgtcttgtcg--cggtgtttgtttagttcctattggaagatctacatcagtca 37876623  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| |||||| |||| | |||||||||||||||| |||| ||||| |||| | ||| ||| |||||||||||||    
T  37876622 attacaaattcaaccaatgacttgggcatcaacgttgcagatccgaaagcatgggtatttcggtgacttaaattttatcatatt 37876539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 311 - 484
Target Start/End: Original strand, 41694618 - 41694788
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagatt 410  Q
    |||||||||||| ||||| ||  ||||||| ||||||| ||||||||  |||||||  ||  |||| | ||||||||||| |||||| |||| ||| |||    
T  41694618 tgttgtttgtcgtcttgtacggtgttgtttaatttcgcctcttgttg--cggtgtttcttg-gttcctgttgaaagatcagcttcagccaattacatatt 41694714  T
Q  411 caatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||||||| | |||||||||||||| || ||| |||   ||| || ||| |||||||||||||||||    
T  41694715 caatcaatgatttgggcatcaacgttgcagatgcagaagcatgtagattctggtgacttagattttatcatatt 41694788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 444
Target Start/End: Original strand, 6436609 - 6436734
Alignment:
Q  314 tgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaa 413  Q
    |||| |||| |||||||||||||   |||||| ||||||||||   |||||||||| | |||| || |||||||||| |||||| |||||| | ||||||    
T  6436609 tgttcgtcgtcttgtgcgacgtt---tgattttgcatcttgtta--cggtgttcgtctggttcataatgaaagatcagcttcagtcaatcaaatattcaa 6436703  T
Q  414 tcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||||||||||||||| ||| |||||||    
T  6436704 tcaatgatttggacgtcaatgttacagatcc 6436734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 423
Target Start/End: Original strand, 4264493 - 4264578
Alignment:
Q  336 tgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgattt 423  Q
    ||||||||||||| |||| |||  |||||||| ||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  4264493 tgtttgatttcgcgtcttattg--cggtgttcatttggttcttattgaaagatcaacttcagtcaattacagatttaatcaatgattt 4264578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 484
Target Start/End: Complemental strand, 19062389 - 19062285
Alignment:
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    |||||||||| || |||| |||| ||| ||||||||||||||||||||||||||||| ||||||| |||| ||||| |||| | ||| |||  |||||||    
T  19062389 ttgaaagatctacatcagtcaattacaaattcaatcaatgatttggacgtcaacgtttcagatccgaaagcatgggtatttcggtgacttaagttttatc 19062290  T
Q  480 atatt 484  Q
    |||||    
T  19062289 atatt 19062285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 365 - 475
Target Start/End: Complemental strand, 12647161 - 12647051
Alignment:
Q  365 ttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgat 464  Q
    ||||||| |||| ||||||||||||| |||||| ||||||||||||||||| || ||||||||| ||| |||| ||||||  ||| |||   |||||| |    
T  12647161 ttcgttttgttcatattgaaagatcagcttcagtcaatcacagattcaatcgatcatttggacgccaatgttgtagatccggaagcatgaatattttggt 12647062  T
Q  465 gatttagattt 475  Q
    |||||||||||    
T  12647061 gatttagattt 12647051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 482
Target Start/End: Complemental strand, 19028971 - 19028849
Alignment:
Q  360 cggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcatt 459  Q
    |||||||| ||| |||| |||||||||||| ||||||| |||  ||| |||||||||||||||||  ||||||||||||| ||||| ||| ||||  |||    
T  19028971 cggtgttcatttagttcctattgaaagatcgacttcagtcaagtacaaattcaatcaatgatttgagcgtcaacgttgcaaatccagaagcatggatatt 19028872  T
Q  460 ttgatgatttagattttatcata 482  Q
    | | | | |||||||||||||||    
T  19028871 tcggtaacttagattttatcata 19028849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 484
Target Start/End: Complemental strand, 29173774 - 29173653
Alignment:
Q  362 gtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcatttt 461  Q
    |||||||||| |||| ||||||||| || || |||  |||| ||| ||||||||||| ||||||  ||||||||||||||||| |||| ||||| ||||     
T  29173774 gtgttcgtttagttcctattgaaagctcgacatcat-caattacaaattcaatcaattatttgggtgtcaacgttgcagatccgaaagcatgggtatttc 29173676  T
Q  462 gatgatttagattttatcatatt 484  Q
    | ||| |||||||||||||||||    
T  29173675 ggtgacttagattttatcatatt 29173653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 444
Target Start/End: Complemental strand, 31128891 - 31128753
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||| | |   |||||||| ||| ||||||   ||||||||||||| |||| |||||||| ||| |  |||| ||    
T  31128891 tgcggcgttgtgttgttagtcgtcttgtgtggc---gtttgattccgcttcttgt--cgcggtgttcgtttagttcctattgaaaaatcgatatcagtca 31128797  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || ||| |||||||||||||||| | ||||||||||||||||||    
T  31128796 attacaaattcaatcaatgatttaggcgtcaacgttgcagatcc 31128753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 37994265 - 37994451
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||  | ||| || | ||||||||||| |||||||||||  | |||||| |||  ||| |||||||| |||| |||||| ||    
T  37994265 tgcggcgttgtgttgttcgtcttcctgtacggcattgtttgattttgcatcttgttg--cagtgttcatttgattcatattgaaaaatcagcttcagtca 37994362  T
Q  401 atcacag-----attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||      ||||||| |||||||||||||||| ||||||||||||  ||||| |   |||  | |||||||||||||||||||||    
T  37994363 atcacatcacaaattcaatgaatgatttggacgtcagcgttgcagatccggaagaaagaatattccggtgatttagattttatcatatt 37994451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 444
Target Start/End: Original strand, 38445137 - 38445293
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||| ||||||||||||| |||| |||||||| ||||   ||||||||| | || | |  ||||||| |||  |||| |||||    
T  38445137 gtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttatcg--cggtgtttgttcagttcctattg 38445231  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || ||||  ||| ||| |||||| ||||||||||||||||||||||||||||||    
T  38445232 aaagatctacatcagtaaattacaaattcaaccaatgatttggacgtcaacgttgcagatcc 38445293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 4778816 - 4778920
Alignment:
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    |||||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||||||||||  ||| ||||| |||| | ||| |||  |||||||    
T  4778816 ttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatc 4778915  T
Q  480 atatt 484  Q
    |||||    
T  4778916 atatt 4778920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 34128798 - 34128617
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| ||| ||||||| |||| |||||||||||||||||||||  || |||||||||  |||||| |||| |||| |||| ||||||| |||| || |     
T  34128798 tgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgt--ggtgtttgtttggttcctattaaaagatcgactttagtcg 34128701  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || | | ||||||||||| |||||| |||||| |||||| |||  |||   |||| |||| ||| | || ||||||||||||||    
T  34128700 attataaattcaatcaattatttgggcgtcaatgttgcatatctgaaatcttgggtatttcgattacttggattttatcatatt 34128617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 425
Target Start/End: Complemental strand, 12554240 - 12554173
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttgg 425  Q
    ||||||||||||||  ||| |||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  12554240 tgcggtgttcgtttgattcatattgaaatatcaacttcagtcaattacagattcaatcaatgatttgg 12554173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 286 - 443
Target Start/End: Complemental strand, 27097534 - 27097380
Alignment:
Q  286 tgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattga 383  Q
    ||||||||||||||   ||||||||||||||||| |||| |||||||| | ||   ||||||| | | |||| |  ||||||| |||  |||| | ||||    
T  27097534 tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcatt---tgatttcaccttttgtcg--cggtgtttgttcagttcctcttga 27097440  T
Q  384 aagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    |||||| || |||| |||| ||| |||||| |||||||||||||||||||||||||||||    
T  27097439 aagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatc 27097380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 358 - 445
Target Start/End: Original strand, 41327544 - 41327631
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    |||||||||||||| |||  |||||||||||| | ||||| |||| ||| |||||| ||||||||||||||||||| || ||||||||    
T  41327544 tgcggtgttcgtttggtttctattgaaagatctatttcagtcaattacaaattcaaccaatgatttggacgtcaacattacagatcca 41327631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 444
Target Start/End: Complemental strand, 36943250 - 36943094
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| |||| ||||  ||||    
T  36943250 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtattgtcg--cggtgtttgtttagttccaattg 36943156  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || | || | || ||| |||| | ||||||||||| ||||||||||||||||||    
T  36943155 aaagatctacattagtcgattacaaattccaccaatgatttgggcgtcaacgttgcagatcc 36943094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 460
Target Start/End: Original strand, 35220368 - 35220468
Alignment:
Q  360 cggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcatt 459  Q
    |||||||| ||| |||| ||||||||||||||| |||| | || ||| |||||| ||||||||||| ||||||| |||||||||  |||| ||||| |||    
T  35220368 cggtgttcatttagttcctattgaaagatcaacatcagtccattacaaattcaaccaatgatttgggcgtcaactttgcagatcttaaagcatgggtatt 35220467  T
Q  460 t 460  Q
    |    
T  35220468 t 35220468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 33760248 - 33760165
Alignment:
Q  362 gtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    ||||||||||  ||| |||||||||||||||||||| |||| | ||| |||||||||||||||  |||| | ||||||||||||    
T  33760248 gtgttcgtttgattcatattgaaagatcaacttcagtcaattatagactcaatcaatgatttgagcgtcgatgttgcagatcca 33760165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 484
Target Start/End: Original strand, 33923749 - 33923872
Alignment:
Q  361 ggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattt 460  Q
    |||||| ||||  ||| |||||||||||| || |||| |||| ||| |||||| ||||||||||| ||||||||||| ||||||  ||| ||| | ||||    
T  33923749 ggtgtttgtttatttcctattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaattt 33923848  T
Q  461 tgatgatttagattttatcatatt 484  Q
     | ||| |||| ||||||||||||    
T  33923849 cggtgacttaggttttatcatatt 33923872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 444
Target Start/End: Original strand, 7448236 - 7448374
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  || |||| |||  || | | |||||||||| || |||| ||    
T  7448236 tgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcg--cgatgtttgttcagtgcctcttgaaagatctacatcagtca 7448330  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || ||| |||||| |||| |||||||||||||||||||||||||    
T  7448331 attacatattcaaccaataatttggacgtcaacgttgcagatcc 7448374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 444
Target Start/End: Original strand, 7646444 - 7646605
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||| ||||||| |||| |||||||| ||||   ||||||||| | |||| |||  ||||| |||   ||||| |||    
T  7646444 gtgatttcgtcgtctaagtgcggcgttatgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgtg--gtgtttgttcaattctttttg 7646538  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatg-----atttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| ||| ||||||||||||     |||||||||||||||||||||||||    
T  7646539 aaagatctacatcagtcaattacaaattcaatcaatgatttaatttggacgtcaacgttgcagatcc 7646605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 484
Target Start/End: Original strand, 8809304 - 8809447
Alignment:
Q  339 ttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgc 438  Q
    |||||||||| |||||| |  |||||||||  | |||| |||||||||||| || |||| |||| |||  ||||||||||||||||| || |||| ||||    
T  8809304 ttgatttcgcgtcttgtcg--cggtgttcgcatagttcctattgaaagatcgacatcagtcaattacaagttcaatcaatgatttgggcgccaacattgc 8809401  T
Q  439 agatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||  ||| ||| | ||||   ||| |||||||||||||||||    
T  8809402 agatccggaagcatgagaatttcagtgacttagattttatcatatt 8809447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 18763457 - 18763635
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| ||||||||||| |||| |||||||| ||||   ||||||||| |||| |    |||||||||||| |||| ||||||||||||  | |||  ||    
T  18763457 tgcggtgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttatca--cggtgttcgtttagttcctattgaaagatcggcatcaatca 18763551  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| |||| |||||| |||||||||| |||||||  ||| ||| | |||| | ||| |||| ||||||||||||    
T  18763552 attacaaattcaaccaatcatttgggcgtcaacgttacagatccggaagcatgtgaatttcggtgacttaggttttatcatatt 18763635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 484
Target Start/End: Complemental strand, 19595962 - 19595836
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggca 457  Q
    |||| |||| |||| |||||||||||||||||| ||| |  |||||| | ||||||| |||||||||| ||||||  |||| ||||   ||| |||   |    
T  19595962 tgcgatgtttgtttagttcttattgaaagatcagctttaatcaatcataaattcaataaatgatttgggcgtcaaaattgccgatctggaagcatgaata 19595863  T
Q  458 ttttgatgatttagattttatcatatt 484  Q
    |||||||||||| ||||||||||||||    
T  19595862 ttttgatgattttgattttatcatatt 19595836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 31788498 - 31788588
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaag 449  Q
    |||||||| |||  |||| |||||||||||| |  |||  |||| ||| |||||| |||||||||||||||||||||||||||||| ||||    
T  31788498 gcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaag 31788588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 444
Target Start/End: Complemental strand, 33585793 - 33585708
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||| |||  |||| |||||||| ||| || |||  |||| ||| |||||| ||||||||||||||||||||||||||||||    
T  33585793 gcggtgtttgttcagttcctattgaaaaatctacctcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcc 33585708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 444
Target Start/End: Complemental strand, 17994746 - 17994703
Alignment:
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||| |||||||||||||||||||||||||||||||| ||||    
T  17994746 atcacaaattcaatcaatgatttggacgtcaacgttgcacatcc 17994703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 484
Target Start/End: Complemental strand, 4041601 - 4041527
Alignment:
Q  410 tcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||| |||||||||||||||||||||||||||||| |||| ||| | |||| ||| | ||||  |||||||||||    
T  4041601 tcaaccaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcgataacttaggctttatcatatt 4041527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 444
Target Start/End: Complemental strand, 5427979 - 5427842
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||| ||||||| |||| |||||| | ||||   ||||||||| |||||| |  ||||||| |||| |||| ||||| |||||| || |||| ||    
T  5427979 tgcggcgttttgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgtcg--cggtgtttgtttagttcatattggaagatctacatcagtca 5427885  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || ||| |||||| |||||| |||  ||||||||||||||||||    
T  5427884 at-acaaattcaaccaatgacttgtgcgtcaacgttgcagatcc 5427842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 12648034 - 12647967
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtt 370  Q
    ||||| ||||||||||| |||| |||||||| |||||||||||||| | ||||||  |||||||||||||    
T  12648034 tgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgt--tgcggtgttcgtt 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 484
Target Start/End: Complemental strand, 12677489 - 12677383
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    ||||||||||||  | | || |||| ||| |||||| ||||||||||| ||||||||||| ||||||  ||| ||| | |||||| ||| |||| |||||    
T  12677489 tattgaaagatcggcataagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttta 12677390  T
Q  478 tcatatt 484  Q
    |||||||    
T  12677389 tcatatt 12677383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 442
Target Start/End: Original strand, 25087128 - 25087162
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagat 442  Q
    |||||||||||||||||||||||||||||||||||    
T  25087128 attcaatcaatgatttggacgtcaacgttgcagat 25087162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 444
Target Start/End: Complemental strand, 42698740 - 42698674
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||||| || ||||  ||| ||| ||||||||| |||||||||||||| ||||||||||||    
T  42698740 tattgaaagatcgacatcagtgaattacaaattcaatcagtgatttggacgtcagcgttgcagatcc 42698674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 444
Target Start/End: Original strand, 1415599 - 1415684
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||| ||||  ||| ||||||||||||  | |||| |||| ||| |||||| ||||||||||| ||||||||||| ||||||    
T  1415599 gcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatcc 1415684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 84171 - 84135
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  84171 attcaatcaaagatttggacgtcaacgttgcagatcc 84135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 444
Target Start/End: Complemental strand, 9169295 - 9169231
Alignment:
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| || ||||  ||| ||| ||||||  |||||||||||||||||||||||||||||    
T  9169295 ttgaaagatctacatcagtgaattacaaattcaacgaatgatttggacgtcaacgttgcagatcc 9169231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 474
Target Start/End: Original strand, 11812695 - 11812840
Alignment:
Q  327 gtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttgga 426  Q
    ||||||||||||||||||| |  ||||||||  |||||||  |||  ||| ||| ||||||||| |||||| | || ||||||||||||||| | |  ||    
T  11812695 gtgcgacgttgtttgattttgtgtcttgttg--cggtgtttatttgattcctatagaaagatcagcttcagtcgattacagattcaatcaataactcaga 11812792  T
Q  427 cgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatt 474  Q
     | |||||||||||||||| ||| || || ||||  |||| |||||||    
T  11812793 tgccaacgttgcagatccagaagcataggtatttcaatgacttagatt 11812840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 32679100 - 32679064
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  32679100 attcaatcaaagatttggacgtcaacgttgcagatcc 32679064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 345
Target Start/End: Original strand, 10548229 - 10548268
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgattt 345  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  10548229 cgttgtgttatttgtcgtcttgtgcgacgttgtttgattt 10548268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 12648113 - 12648078
Alignment:
Q  224 tttctttcaatctaaataagtgatttccatatatat 259  Q
    ||||||||||||||||||||||||||||| ||||||    
T  12648113 tttctttcaatctaaataagtgatttccacatatat 12648078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 252
Target Start/End: Original strand, 14955430 - 14955461
Alignment:
Q  221 ctctttctttcaatctaaataagtgatttcca 252  Q
    ||||||||||||||||||||||||||||||||    
T  14955430 ctctttctttcaatctaaataagtgatttcca 14955461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 447
Target Start/End: Original strand, 18113960 - 18113999
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaa 447  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  18113960 attcaataaatgatttggatgtcaacgttgcagatccaaa 18113999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 447
Target Start/End: Original strand, 27949517 - 27949556
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaa 447  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  27949517 attcaatcaaagatttgggcgtcaacgttgcagatccaaa 27949556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 29574822 - 29574783
Alignment:
Q  224 tttctttcaatctaaataagtgatttccatatatattaag 263  Q
    ||||||||||||||||||||||||||||| |||||| |||    
T  29574822 tttctttcaatctaaataagtgatttccacatatatcaag 29574783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 443
Target Start/End: Original strand, 36323946 - 36323981
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    |||||||||||| |||||||||||||||||||||||    
T  36323946 attcaatcaatggtttggacgtcaacgttgcagatc 36323981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 442
Target Start/End: Original strand, 3240977 - 3241011
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagat 442  Q
    ||||||||||||||||||||||||| |||||||||    
T  3240977 attcaatcaatgatttggacgtcaatgttgcagat 3241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 18695147 - 18695180
Alignment:
Q  410 tcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    |||||||||||||||| |||||||||||||||||    
T  18695147 tcaatcaatgatttggtcgtcaacgttgcagatc 18695180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 418
Target Start/End: Original strand, 19597898 - 19597980
Alignment:
Q  334 gttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaat 418  Q
    |||||||||||| |  ||||||||||   |||||||||  |||||||||||||| |||||||||  ||||||| ||| |||||||    
T  19597898 gttgtttgattttgtgtcttgttgtga--tgttcgtttgattcttattgaaagaccaacttcagttaatcacaaatttaatcaat 19597980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 24461342 - 24461382
Alignment:
Q  218 tttctctttctttcaatctaaataagtgatttccatatatat 259  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  24461342 tttctcttt-tttcaatctaaataagtgatttccacatatat 24461382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 444
Target Start/End: Complemental strand, 29279699 - 29279543
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||| | |||| |||| ||||| ||   ||||||||  |||||| |  |||| || |||| ||||   |||    
T  29279699 gtgatttcgtcgtctaattgcggcgttgtgttggtagtcgtcttgggcgacatt---tgatttcgtgtcttgtcg--cggtattagtttagttcccgttg 29279605  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || ||||||| |||| | || ||| |||||||||||||||||  |||||| |||||||||||    
T  29279604 aatgatcaacatcagtcgattacaaattcaatcaatgatttgtgcgtcaatgttgcagatcc 29279543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 445
Target Start/End: Original strand, 41431119 - 41431156
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  41431119 attcaatcaaagatttggatgtcaacgttgcagatcca 41431156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 3269101 - 3269065
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  3269101 attcaatcaaagatttgggcgtcaacgttgcagatcc 3269065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 3269660 - 3269624
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  3269660 attcaatcaaagatttgggcgtcaacgttgcagatcc 3269624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 3270219 - 3270183
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  3270219 attcaatcaaagatttgggcgtcaacgttgcagatcc 3270183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 6173723 - 6173759
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  6173723 attcaatcaaagatttgggcgtcaacgttgcagatcc 6173759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 7015701 - 7015665
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  7015701 attcaatcaaagatttgggcgtcaacgttgcagatcc 7015665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 8308261 - 8308297
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| || |||||||||||||||||||||||    
T  8308261 attcaatcaaagaattggacgtcaacgttgcagatcc 8308297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 454
Target Start/End: Original strand, 11833501 - 11833614
Alignment:
Q  339 ttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgc 438  Q
    |||||||||| |||||| |  |||||||||||| |||| |||| | ||||| |  | || |||| |||  || |||||||||| ||||| ||||||||||    
T  11833501 ttgatttcgcgtcttgtcg--cggtgttcgtttagttcatattaagagatcgatataagtcaattacaagttaaatcaatgatctggacatcaacgttgc 11833598  T
Q  439 agatccaaaagaatgg 454  Q
    |||||| |||| ||||    
T  11833599 agatccgaaagtatgg 11833614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 484
Target Start/End: Original strand, 14416208 - 14416328
Alignment:
Q  365 ttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatg-atttggacgtcaacgttgcagatccaaaagaatgggcattttga 463  Q
    ||||||| |||| | |||||| ||| ||||||| |||| |||||||||||||||| |||||||| | ||| ||||| || | |||| ||||| |||        
T  14416208 ttcgtttggttcctgttgaaatatcgacttcagtcaattacagattcaatcaatgaatttggacattaacattgcatattcgaaagcatgggtattagag 14416307  T
Q  464 tgatttagattttatcatatt 484  Q
    |||  ||||||||||||||||    
T  14416308 tgacatagattttatcatatt 14416328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 414
Target Start/End: Complemental strand, 18107806 - 18107750
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaat 414  Q
    |||||||||||||| |||| |||||| |||| ||| |||  ||||||||||||||||    
T  18107806 tgcggtgttcgtttggttcatattgagagataaacctcactcaatcacagattcaat 18107750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 20047072 - 20047036
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  20047072 attcaatcaaagatttggacatcaacgttgcagatcc 20047036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 22421826 - 22421862
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||||||||||| |||||||||| |||||||    
T  22421826 attcaatcaatgatttgggcgtcaacgttacagatcc 22421862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 32913331 - 32913367
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  32913331 attcaatcaaagatttgggcgtcaacgttgcagatcc 32913367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 33229130 - 33229094
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  33229130 attcaatcaaagatttgggcgtcaacgttgcagatcc 33229094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 45128295 - 45128331
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  45128295 attcaatcaaagatttggacgttaacgttgcagatcc 45128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 8e-56; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 18890833 - 18890629
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||||||||| |||| ||||||||||||||||||||||||||| ||  |||||| ||||||||||| |||| ||    
T  18890833 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcgcattttttgttgtgtggtgttcgtttggttcgta 18890734  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||  || || ||| || ||||||||||||||||    
T  18890733 ttgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacataggtattatggtgatttagattttatc 18890634  T
Q  480 atatt 484  Q
    |||||    
T  18890633 atatt 18890629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 39657409 - 39657613
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||| ||||| |||| |||||||| |||||||||||||||||||||  |||||||||||||||||| |||| ||    
T  39657409 cgtgatttcgtcgtcttagtgcgacgttgtattgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgta 39657508  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||| | ||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||| ||| || |||||||||||| |||    
T  39657509 ttgaaagattagcttcagacaatcataaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatc 39657608  T
Q  480 atatt 484  Q
    |||||    
T  39657609 atatt 39657613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 307 - 484
Target Start/End: Complemental strand, 29617379 - 29617204
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    ||||||||||| |||| |||||||| || ||||||||||||| ||||||||  |||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  29617379 gttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttg--cggtgttcgtttggttcttattgaaagaccaacttcagtcaatcaca 29617282  T
Q  407 gattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||||||||||||||||||||||||||||||| ||  || |  ||| || |||||||||||||||||||||    
T  29617281 gattcaatcaatgatttggacgtcaacgttgcagatccataaacattgttattctggtgatttagattttatcatatt 29617204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 285 - 482
Target Start/End: Complemental strand, 1236825 - 1236629
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||| | |||||||||| || | |||||||| ||||||||||||| |||||||||||  |||||||||||  |||| |||||    
T  1236825 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttg--cggtgttcgttg-gttcatattg 1236729  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| ||| | | | ||| || ||||||||||| |||||||    
T  1236728 aaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcata 1236629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 285 - 482
Target Start/End: Complemental strand, 1239525 - 1239329
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||| | ||||||||||  ||| |||||||| ||||||||||||| |||||||||||  |||||||||||  |||| |||||    
T  1239525 gtgatttcgtcgtctaagtgcgaccttgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttg--cggtgttcgttg-gttcatattg 1239429  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| ||| | | | ||| || ||||||||||| |||||||    
T  1239428 aaagatcaacttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcata 1239329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 308 - 484
Target Start/End: Original strand, 15344294 - 15344467
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    |||||||||| |||| |||||||| ||| |||||||||  ||||||||||  |||||||||||  |||| |||||||||||||| ||||| |||||||||    
T  15344294 ttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttg--cggtgttcgttg-gttcatattgaaagatcaagttcagtcaatcacag 15344390  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||||||||||||||||||||||| ||| | | | ||| || ||||||||||| |||||||||    
T  15344391 attcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatatt 15344467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 308 - 484
Target Start/End: Original strand, 15433359 - 15433532
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    |||||||||| |||| |||||||| ||| |||||||||  ||||||||||  |||||||||||  |||| |||||||||||||| ||||| |||||||||    
T  15433359 ttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttg--cggtgttcgttg-gttcatattgaaagatcaagttcagtcaatcacag 15433455  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||||||||||||||||||||||| ||| | | | ||| || ||||||||||| |||||||||    
T  15433456 attcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatatt 15433532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 308 - 484
Target Start/End: Original strand, 15524663 - 15524836
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    |||||||||| |||| |||||||| ||| |||||||||  ||||||||||  |||||||||||  |||| |||||||||||||| ||||| |||||||||    
T  15524663 ttgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttg--cggtgttcgttg-gttcatattgaaagatcaagttcagtcaatcacag 15524759  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||||||||||||||||||||||| ||| | | | ||| || ||||||||||| |||||||||    
T  15524760 attcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatatt 15524836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 306 - 484
Target Start/End: Original strand, 41896496 - 41896676
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatc 403  Q
    |||||||||||| |||| |||||||| |||||||||||||| ||| ||  |||||||||||||||||| |||| ||||||||||||| ||||||||||||    
T  41896496 cgttgtgttgttggtcgtcttgtgcggcgttgtttgatttcacatattttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatc 41896595  T
Q  404 acagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||| ||||||| |||||||| | | ||||||||||||||| | ||| ||| | ||| || |||||||||||| ||||||||    
T  41896596 acaaattcaattaatgatttaggcatcaacgttgcagatctagaagcatgagtattctggtgatttagatttcatcatatt 41896676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 286 - 484
Target Start/End: Complemental strand, 8443639 - 8443441
Alignment:
Q  286 tgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattga 383  Q
    ||||||||||||||   ||||| ||||||||||| |||| |||||||| |||||||||||| ||| ||||||||  | |||||||||| ||||   ||||    
T  8443639 tgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttg--cagtgttcgtttggttcaatttga 8443542  T
Q  384 aagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatat 483  Q
    |||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||  ||| |  || ||| || |||||||||||| |||||||    
T  8443541 aagatcaacttcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatccggaagcactggtattatggtgatttagatttgatcatat 8443442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 5333407 - 5333588
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| ||||||||||| |||| ||||||||  |||||||||||| || |||||||   |||||||||||| |||| |||||||||||||||||||| ||    
T  5333407 tgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttc--cggtgttcgtttggttcctattgaaagatcaacttcagtca 5333504  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||| ||||||||||| |||||| ||||||||||| ||||||| ||| ||| | ||| |  ||||||||||||| |||||||    
T  5333505 atcacatattcaatcaattatttgggcgtcaacgttgtagatccagaagcatgagtattctagtgatttagattttgtcatatt 5333588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 471274 - 471096
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||| ||||||||| |||| || ||||||||||   |||||| |  ||||||||  ||||| |||||| |||||||||||||||||| |||||  ||    
T  471274 tgcggcgctgtgttgttcgtcgtctggtgcgacgtt---tgattttgtgtcttgttg--cggtgctcgtttggttcttattgaaagatcatcttcactca 471180  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||| |||||||||||||||||||  ||||||||||||||||||  ||| ||||| ||| ||||||||||||||||||||||||    
T  471179 atcatagattcaatcaatgatttgtgcgtcaacgttgcagatccggaagcatgggtattctgatgatttagattttatcatatt 471096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 308 - 472
Target Start/End: Original strand, 3240365 - 3240527
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    |||||||||| |||| ||||| ||||||||||||||||||| | ||||||||  ||||| |||| |||  ||||||||||||  |||||| ||||||||     
T  3240365 ttgtgttgttcgtcgtcttgtacgacgttgtttgatttcgcgtgttgttgtg--gtgtttgtttggttaatattgaaagatcggcttcagtcaatcacat 3240462  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttaga 472  Q
    |||||||| |||||||||||| ||| |||||||||||| ||| ||||| ||| || |||||||||    
T  3240463 attcaatcgatgatttggacgccaatgttgcagatccagaagtatgggtattctggtgatttaga 3240527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 484
Target Start/End: Original strand, 14585715 - 14585836
Alignment:
Q  363 tgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttg 462  Q
    ||||||||| |||| |||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| ||||| ||  ||    
T  14585715 tgttcgtttggttcgtattgaaatatcagcttcagacaatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaagcatgggtatcctg 14585814  T
Q  463 atgatttagattttatcatatt 484  Q
     |||||||||||| ||||||||    
T  14585815 gtgatttagatttcatcatatt 14585836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 24099385 - 24099180
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttatt 381  Q
    ||||||||||||||||   |||| |||||||||||| |||| | ||| |  |||||||||||||||||||||||  |||||||||| ||| |||| ||||    
T  24099385 cgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgt--tgcggtgttcatttggttcatatt 24099288  T
Q  382 gaaagatcaacttcagaca-----atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttt 476  Q
    |||| |||| |||||| ||     |||||| ||||| ||||||||||| |||||||||||||||||||  ||||| |   |||||| |||||||||||||    
T  24099287 gaaaaatcagcttcagtcaatcgcatcacaaattcattcaatgatttgtacgtcaacgttgcagatccggaagaaagaatattttggtgatttagatttt 24099188  T
Q  477 atcatatt 484  Q
    ||||||||    
T  24099187 atcatatt 24099180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 367 - 484
Target Start/End: Original strand, 42046263 - 42046380
Alignment:
Q  367 cgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatga 466  Q
    ||||| |||| ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||||| ||| ||||| ||| || |||    
T  42046263 cgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagcatgggtattctggtga 42046362  T
Q  467 tttagattttatcatatt 484  Q
    ||||||||| ||||||||    
T  42046363 tttagatttcatcatatt 42046380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 356 - 484
Target Start/End: Complemental strand, 43834053 - 43833926
Alignment:
Q  356 tgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatggg 455  Q
    |||||||| ||||||| |||| ||||||| ||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||| | ||| ||| |    
T  43834053 tgtgcggtattcgtttggttcctattgaa-gattaacttcagacaatcacaaattcaatcaatgatttagacgtcaacgttgcagatctagaagcatgag 43833955  T
Q  456 cattttgatgatttagattttatcatatt 484  Q
     ||| || |||||||| ||||||||||||    
T  43833954 tattctggtgatttagtttttatcatatt 43833926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 14916316 - 14916118
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||||||||| |||||  |||   ||||||| |  |||||||||||   ||||||||  |||||||||||| |||| |||||    
T  14916316 gtgatttcgtcgtctgggtgcggcgttgcgttgtccgtccttttgtgcggcactgtttgatttcatgtcttgttg--cggtgttcgtttggttcatattg 14916219  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||| ||||||||  |||||| ||||||||||||||||||||||||| | |||||||||||  ||| |||   | |||| |||||||||||||||||||    
T  14916218 aaagaccaacttcaatcaatcagagattcaatcaatgatttggacgtccatgttgcagatccggaagcatgaata-tttgttgatttagattttatcata 14916120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 324 - 481
Target Start/End: Original strand, 21237791 - 21237946
Alignment:
Q  324 cttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgattt 423  Q
    |||||| | |||||||||| ||||| ||||||||  | |||||||||| |||| |||||||||| ||  ||||  ||||| || ||||||||||||||||    
T  21237791 cttgtggggcgttgtttgacttcgcgtcttgttg--cagtgttcgtttggttcatattgaaagaccagtttcaatcaatcccatattcaatcaatgattt 21237888  T
Q  424 ggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    ||||||||| |||||||||||| ||| ||| | | | || ||||||||||||||||||    
T  21237889 ggacgtcaatgttgcagatccagaagcatgtgtactctgttgatttagattttatcat 21237946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 327 - 444
Target Start/End: Original strand, 8981167 - 8981282
Alignment:
Q  327 gtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttgga 426  Q
    ||||| |||| ||||||||||| ||||||||  ||||||||||||  ||  ||||||||||||| | |||| ||||||||||||||||  ||||||||||    
T  8981167 gtgcggcgttttttgatttcgcgtcttgttg--cggtgttcgtttgtttgatattgaaagatcagcgtcagtcaatcacagattcaattgatgatttgga 8981264  T
Q  427 cgtcaacgttgcagatcc 444  Q
    |||||||||| |||||||    
T  8981265 cgtcaacgttacagatcc 8981282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 378 - 484
Target Start/End: Complemental strand, 33347557 - 33347451
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | |||| ||||||| ||||| |||| ||||| |||| | ||| | ||| ||||    
T  33347557 tattgaaagatcaacttcagtcaatcacagattcaatcaatgatttaggcgtcgacgttgcggatccgaaagcatgggtatttcggtgactcagaattta 33347458  T
Q  478 tcatatt 484  Q
    |||||||    
T  33347457 tcatatt 33347451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 23230606 - 23230802
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||| | ||||||| |||| |||||||| ||||   ||||||||| |||||| |  ||||||| |||| |||| |||||    
T  23230606 gtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcg--cggtgtttgtttagttcctattg 23230700  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
     |||||| || |||| |||| ||| |||||| |||||| |||| ||||||||||||||||||  ||| ||||| |||| | ||| |||| ||||||||||    
T  23230701 gaagatctacatcagtcaattacaaattcaaccaatgacttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcata 23230800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 16247331 - 16247153
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||||||||||||||  ||| |||||||||||||   ||||||| | |||||| |  |||||||||||| |||| ||| |||||||| || |||   |    
T  16247331 tgcggcgttgtgttgttcatcgtcttgtgcgacgtt---tgatttcacgtcttgtcg--cggtgttcgtttagttcctatggaaagatcgacatcaatta 16247237  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||||||||||||||| | |||| |||||||||||  ||| ||||| |||| | ||| |||||||| ||||||||    
T  16247236 attacaaattcaatcaatgatttgggcatcaatgttgcagatccggaagcatgggtatttcgctgacttagatttgatcatatt 16247153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 40619181 - 40619003
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||||||||||||||||||| |||||| ||||||   ||||||||  |||| | |  |||||||| ||| ||||||||| ||||||| ||   || ||    
T  40619181 tgcggcgttgtgttgtttgtcgtcttgtgtgacgtt---tgatttcgtgtcttatcg--cggtgttcatttagttcttattcaaagatcgacaatagtca 40619087  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| ||||||||||| |||||| ||||||||||||||||||| ||| ||| | |||| |  || ||| |||||||||||||    
T  40619086 attacaaattcaatcaataatttgggcgtcaacgttgcagatccagaagcatgagtatttcgcagacttaaattttatcatatt 40619003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 442
Target Start/End: Original strand, 34609792 - 34609953
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttatt 381  Q
    ||||||||||||||||   |||||||||| ||||||  ||| ||||||||||||| |||||||| |  ||||||  |||||||||||||| |||   |||    
T  34609792 cgtgatttcgtcgtctaagtgcggcgttgggttgttcctcgtcttgtgcgacgttatttgattttgtgtcttgt--tgcggtgttcgttt-gtttccatt 34609888  T
Q  382 gaaagatcaacttcagacaatc----acagattcaatcaatgatttggacgtcaacgttgcagat 442  Q
    |||||||||||||||| |||||    ||| || ||||||||||||||| ||| ||||||||||||    
T  34609889 gaaagatcaacttcagtcaatcagttacaaatgcaatcaatgatttgggcgtgaacgttgcagat 34609953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 442
Target Start/End: Original strand, 5046767 - 5046870
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||| || |||||| ||  || ||||||| |||| |||||||| ||||| ||||| |||| ||||||||||||||| ||||||||||| |||||    
T  5046767 gtttgatttcacaccttgttttg--gtattcgtttggttcctattgaaaaatcaaattcagtcaattacagattcaatcaataatttggacgtcgacgtt 5046864  T
Q  437 gcagat 442  Q
    ||||||    
T  5046865 gcagat 5046870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 444
Target Start/End: Complemental strand, 7677391 - 7677253
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||  | ||   ||||||||| |||||| |  |||||||||||| |||| || ||||| |||||| |||| ||    
T  7677391 tgcggcgttgtgttgttcgtcgtcttgtgctgcatt---tgatttcgcgtcttgtcg--cggtgttcgtttggttcctactgaaatatcaacatcagtca 7677297  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || |||||||| | ||||||||||  ||||||||||||||||||    
T  7677296 attacagattcgaccaatgatttgagcgtcaacgttgcagatcc 7677253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 7883349 - 7883171
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||| ||||   ||||||| | |||||| |  ||||||| |||  |||| |||||||||||| || | |  ||    
T  7883349 tgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcacgtcttgtcg--cggtgtttgttcagttcatattgaaagatctacattaatca 7883255  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| |||| |||||||||||| ||||||||||||  ||| ||||| |||| | ||| |||| ||||||||||||    
T  7883254 attacaaattcaagcaataatttggacgtcagcgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatatt 7883171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 484
Target Start/End: Complemental strand, 16928793 - 16928687
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    |||||||||||| || |||| |||| ||| |||||| ||||||||||||| |||||||||||||||| ||||  |||| |||| | ||| |||| |||||    
T  16928793 tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttggacatcaacgttgcagatccgaaagcgtgggtatttcggtgacttaggtttta 16928694  T
Q  478 tcatatt 484  Q
    |||||||    
T  16928693 tcatatt 16928687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 442
Target Start/End: Complemental strand, 31013683 - 31013580
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    ||||||||||||||||||| |  ||||||| |||  |||| |||||||| ||| || |||| |||| | | |||||||||||||||||||||||||||||    
T  31013683 gtttgatttcgcatcttgtcg--cggtgtttgttcagttcctattgaaatatctacatcagtcaattaaaaattcaatcaatgatttggacgtcaacgtt 31013586  T
Q  437 gcagat 442  Q
    ||||||    
T  31013585 gcagat 31013580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 444
Target Start/End: Original strand, 3673404 - 3673560
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||| ||||||||||| |||| ||| ||||    ||||||||||||  ||||||||  |||||||| ||| |||| |||||    
T  3673404 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgg---tgtttgatttcgtgtcttgttg--cggtgttcctttagttcctattg 3673498  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| ||| ||  |||||||| ||||| ||||||||||||||||||    
T  3673499 aaagatcgacatcagtcaattacaaatcaaatcaatgctttgggcgtcaacgttgcagatcc 3673560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 14545029 - 14544833
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||| ||||| |||| |||||| | |   |||||||||| | ||||||   ||||||||| ||| |||| |||||    
T  14545029 gtgatttcgtcgtctaattgcggcgttgttttgttagtcgtcttgtgtggc---gtttgatttcacgtcttgt--cgcggtgttcatttagttcctattg 14544935  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||  |||| |||  || ||||||| |||||| ||||||||||||||||||  ||| ||||| |||| | ||| ||| |||||||||||    
T  14544934 aaagatcgacatcaatcaattacaagttaaatcaattatttgggcgtcaacgttgcagatccggaagcatgggaatttcggtgacttaaattttatcata 14544835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 444
Target Start/End: Original strand, 37971246 - 37971402
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||| ||||||| |||| |||||||| ||||   ||||||||| | || | |||  ||||| |||  |||| |||||    
T  37971246 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttttcgtg--gtgtttgttcagttcctattg 37971340  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||  |||| ||| |||||| ||||||||||||||||||||||||||||||    
T  37971341 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcc 37971402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 306 - 484
Target Start/End: Complemental strand, 45445914 - 45445741
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcac 405  Q
    |||||| ||||| |||| |||||||| ||||   ||||||||||| |||| |  ||||||| ||||  ||| ||||||||||||  | |||| |||| ||    
T  45445914 cgttgtattgttcgtcgtcttgtgcggcgtt---tgatttcgcattttgtcg--cggtgtttgtttatttcctattgaaagatcggcatcagtcaattac 45445820  T
Q  406 agattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    | |||||| ||||||||||| ||||||||||| | ||||  ||| ||| | |||||| ||| |||||||||||||||||    
T  45445819 aaattcaaccaatgatttgggcgtcaacgttgaaaatccggaagcatgtgaattttggtgacttagattttatcatatt 45445741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 408 - 484
Target Start/End: Complemental strand, 7198201 - 7198125
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||||||||||| |||||||||||||||||  ||| |||   |||||| |||||||||||||||||||||    
T  7198201 attcaatcaatgatttggatgtcaacgttgcagatccggaagcatgaatattttggtgatttagattttatcatatt 7198125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 484
Target Start/End: Original strand, 28897723 - 28897868
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| |||||| |||  |||||||||| |||| |||||||||||| || |||| |||| | |  |||||| |||||||||| ||| ||||||    
T  28897723 gtttgatttcgcgtcttgtcgtg--gtgttcgtttagttcctattgaaagatcgacatcagtcaattataagttcaattaatgatttgggcgtaaacgtt 28897820  T
Q  437 gcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||| |  ||| || |  |||| ||||| |||||||||||||||||    
T  28897821 gcagatacggaagtattgaaatttcgatgacttagattttatcatatt 28897868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 484
Target Start/End: Complemental strand, 33214746 - 33214601
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| |||||| |||  |||||| ||| |||| ||||||||||||  | |||| |||| ||| |||||| ||||||||||| | ||||||||    
T  33214746 gtttgatttcgcgtcttgtcgtg--gtgttcttttagttcctattgaaagatcggcgtcagtcaattacaaattcaaccaatgatttgggcttcaacgtt 33214649  T
Q  437 gcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||  ||| ||| | |||| ||||| |||  ||||||||||||    
T  33214648 gcagatccggaagcatgtgaatttcgatgacttatgttttatcatatt 33214601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 444
Target Start/End: Original strand, 10377670 - 10377808
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| | || |||||||| ||||   ||||||||| | |||| |||  ||||| |||  |||| |||||||||||| || |||| ||    
T  10377670 tgcggcgttgtgttgttcgccgtcttgtgcggcgtt---tgatttcgcgttttgtcgtg--gtgtttgttcagttcctattgaaagatctacatcagtca 10377764  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || | | |||||| ||||||||||||| ||||||||||||||||    
T  10377765 attataaattcaaccaatgatttggacatcaacgttgcagatcc 10377808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 484
Target Start/End: Complemental strand, 26469198 - 26469076
Alignment:
Q  362 gtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcatttt 461  Q
    |||||||||| |||| |||||||||||||| || ||  |||| || |||||||||||||||||| |||||||||||   |||  || | ||| | ||| |    
T  26469198 gtgttcgttttgttcctattgaaagatcaagtttagttaatcgcatattcaatcaatgatttgggcgtcaacgttgtgcatctgaatgcatgtgtattct 26469099  T
Q  462 gatgatttagattttatcatatt 484  Q
    | |||||||||||||||||||||    
T  26469098 ggtgatttagattttatcatatt 26469076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 362 - 484
Target Start/End: Complemental strand, 27110517 - 27110395
Alignment:
Q  362 gtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcatttt 461  Q
    |||||||||| |||| | |||||||||  || ||||||||  ||| |||||||||||||||||  |||||||||||||||||   ||| ||| | |||||    
T  27110517 gtgttcgtttagttcatgttgaaagattgacatcagacaactacaaattcaatcaatgatttgagcgtcaacgttgcagatctggaagcatgtgtatttt 27110418  T
Q  462 gatgatttagattttatcatatt 484  Q
      ||| |||||||||||||||||    
T  27110417 agtgacttagattttatcatatt 27110395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 444
Target Start/End: Complemental strand, 28086853 - 28086783
Alignment:
Q  374 ttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||| |||||||||| |||||||  ||| ||| ||||||||||||||||||| |||||||||||||||||    
T  28086853 ttcttgttgaaagatcgacttcagttaattacaaattcaatcaatgatttggaagtcaacgttgcagatcc 28086783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 17693669 - 17693544
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| |||| |||| |||| ||||||| || |||| |||| ||| |||||| ||||||||||| ||||||| ||||||||||  ||| ||| | ||    
T  17693669 gcggtgtttgtttagttcctattaaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgcagatccggaagcatgagtat 17693570  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || ||||| |||  ||||||||||||    
T  17693569 ttcgatgacttatgttttatcatatt 17693544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 20553296 - 20553171
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| |||  |||| |||||||||||| |  |||  |||| ||| |||||| ||||||||||||||||||||||||||||||  ||| ||| | ||    
T  20553296 gcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtat 20553197  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||| ||||||||||||    
T  20553196 ttcggtgacttaggttttatcatatt 20553171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 20559799 - 20559674
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| |||  |||| |||||||||||| |  |||  |||| ||| |||||| ||||||||||||||||||||||||||||||  ||| ||| | ||    
T  20559799 gcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtat 20559700  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||| ||||||||||||    
T  20559699 ttcggtgacttaggttttatcatatt 20559674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 20571361 - 20571236
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| |||  |||| |||||||||||| |  |||  |||| ||| |||||| ||||||||||||||||||||||||||||||  ||| ||| | ||    
T  20571361 gcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtat 20571262  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||| ||||||||||||    
T  20571261 ttcggtgacttaggttttatcatatt 20571236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 439
Target Start/End: Original strand, 8826171 - 8826325
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttatt 381  Q
    ||||||||||||||||   ||| ||||| ||||||| |||| |||||| | |||||| ||| ||||  ||||||||  |||||||| |||  ||| ||||    
T  8826171 cgtgatttcgtcgtctgagtgcagcgttatgttgttcgtcgtcttgtgtggcgttgtgtgaattcgtgtcttgttg--cggtgttc-tttgattcatatt 8826267  T
Q  382 gaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgca 439  Q
    |||| ||||||||||   |||||  ||||||||||||||||||| | |||||||||||    
T  8826268 gaaatatcaacttcaatgaatcatcgattcaatcaatgatttgggcatcaacgttgca 8826325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 442
Target Start/End: Complemental strand, 27498465 - 27498337
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    |||||||||| |||| |||||||||| ||   ||||||||| |||||| |||  |||||| |||  ||| ||||||||||||||||||||  | | |||     
T  27498465 ttgtgttgttcgtcgtcttgtgcgacatt---tgatttcgcgtcttgtcgtg--gtgttcatttaattcctattgaaagatcaacttcagttagt-acaa 27498372  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagat 442  Q
    ||||||| |||||||||| ||||||| ||||||||    
T  27498371 attcaattaatgatttgggcgtcaacattgcagat 27498337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 484
Target Start/End: Complemental strand, 24186666 - 24186591
Alignment:
Q  409 ttcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||| |||||| |||||||||||||||||| |||| ||||| ||||   ||| ||| |||||||||||||    
T  24186666 ttcaatcaataatttgggcgtcaacgttgcagatccgaaagcatgggtatttcagtgacttaaattttatcatatt 24186591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 443
Target Start/End: Complemental strand, 19444120 - 19444035
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    ||||||||||||||  |||||||| ||||| | ||||||| |||||| |||||| || |||||||||| || |||| ||| |||||    
T  19444120 tgcggtgttcgtttgattcttattaaaagaccgacttcagtcaatcatagattctattaatgatttgggcgacaactttgtagatc 19444035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 430
Target Start/End: Original strand, 39450577 - 39450646
Alignment:
Q  361 ggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtc 430  Q
    ||||||||||| ||| || ||||||||||||||| || |||| ||| |||||||||| |||||| |||||    
T  39450577 ggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaatcaacgatttgaacgtc 39450646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 40211357 - 40211232
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| |||| |||  |||||||||||| || |||| | || ||| |||| | ||||||||||| ||||||||||| ||||||  ||| ||| | ||    
T  40211357 gcggtgtttgtttagtttctattgaaagatctacatcagtcgattacaaattccaccaatgatttgggcgtcaacgttgtagatccggaagcatgagtat 40211258  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| || ||||||||||||||    
T  40211257 ttcgttgacttggattttatcatatt 40211232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 20227478 - 20227438
Alignment:
Q  218 tttctctttctttcaatctaaataagtgatttccatatata 258  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  20227478 tttctctttctttcaatctaaataagtggtttccacatata 20227438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 33896176 - 33896212
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33896176 attcaatcaaagatttggacgtcaacgttgcagatcc 33896212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 478
Target Start/End: Original strand, 10331165 - 10331244
Alignment:
Q  399 caatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttat 478  Q
    |||||| ||||||||||||| ||||| ||||||||| || ||||||| ||| ||| | ||| |  |||||||||||||||    
T  10331165 caatcaaagattcaatcaataatttgaacgtcaacggtgtagatccagaagcatgagtattctagtgatttagattttat 10331244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 444
Target Start/End: Complemental strand, 23851483 - 23851448
Alignment:
Q  409 ttcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||||| ||||||||||||||||||||||||||    
T  23851483 ttcaatcaaagatttggacgtcaacgttgcagatcc 23851448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 24419202 - 24419143
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttg 437  Q
    |||||||||||||  ||||| ||| || | |||||||||||||||| |||||||||||||    
T  24419202 tattgaaagatcagtttcagtcaaccaaatattcaatcaatgattttgacgtcaacgttg 24419143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 442
Target Start/End: Complemental strand, 9637511 - 9637381
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    ||||||||||| |||| ||||| |||| ||   ||||||||| |||| |||  | || ||||||| |||| ||||||||||||||| ||||  ||| |||    
T  9637511 gttgtgttgttcgtcgtcttgtacgacatt---tgatttcgcgtcttattg--cagtattcgtttagttcctattgaaagatcaacatcagttaattaca 9637417  T
Q  407 gattcaatcaatgatttggacgtcaacgttgcagat 442  Q
     |  |||| |||||||||  ||||||||||||||||    
T  9637416 aacacaattaatgatttgagcgtcaacgttgcagat 9637381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 20227391 - 20227333
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtg 359  Q
    |||| |||||| ||||| |||| ||| ||||||||||||||||||| ||| ||||||||    
T  20227391 tgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgatttcacattttgttgtg 20227333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 442
Target Start/End: Complemental strand, 14906912 - 14906879
Alignment:
Q  409 ttcaatcaatgatttggacgtcaacgttgcagat 442  Q
    ||||||||||||||||| ||||||||||||||||    
T  14906912 ttcaatcaatgatttgggcgtcaacgttgcagat 14906879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 445
Target Start/End: Complemental strand, 17427206 - 17427169
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  17427206 attcaatcaatgatttggacgtcaacattgaagatcca 17427169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 484
Target Start/End: Complemental strand, 25191171 - 25190995
Alignment:
Q  305 gcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatca 404  Q
    ||||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| ||||  ||| ||||||||||||| | |||| |||| |    
T  25191171 gcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttgtcg--cggtgtttgtttatttcctattgaaagatcagcatcagtcaatta 25191077  T
Q  405 cagattcaatcaatgat--ttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
       |||||| |||||||  |||| ||||||||||| ||||||  ||| ||| | |||  ||||| |||| ||||||||||||    
T  25191076 tgaattcaaccaatgatatttgggcgtcaacgttgaagatccggaagcatgtgaattgcgatgacttaggttttatcatatt 25190995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 423
Target Start/End: Complemental strand, 36948541 - 36948428
Alignment:
Q  305 gcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatca 404  Q
    |||||||||||||||||| | |||||| ||||   ||||||||| |||||| |  ||||||| ||||  ||| |||||||| ||  || |||| |||| |    
T  36948541 gcgttgtgttgtttgtcgtcctgtgcggcgtt---tgatttcgcgtcttgtcg--cggtgtttgtttaattcctattgaaaaattgacatcagtcaatta 36948447  T
Q  405 cagattcaatcaatgattt 423  Q
    || ||||||||||||||||    
T  36948446 caaattcaatcaatgattt 36948428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 391
Target Start/End: Complemental strand, 44100005 - 44099927
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaa 391  Q
    ||||||| |||| |||||||| |||||||||||||| | |||  || |||||||||| |||  ||| ||||||||||||||    
T  44100005 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtct--ttttgcggtgttcatttgattcatattgaaagatcaa 44099927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 3240282 - 3240314
Alignment:
Q  227 ctttcaatctaaataagtgatttccatatatat 259  Q
    |||||||||||||||||||||||||| ||||||    
T  3240282 ctttcaatctaaataagtgatttccacatatat 3240314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 8443708 - 8443672
Alignment:
Q  223 ctttctttcaatctaaataagtgatttccatatatat 259  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  8443708 ctttctttcgatctaaataagtgatttccacatatat 8443672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 11196982 - 11197018
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  11196982 attcaatcaacgatttgggcgtcaacgttgcagatcc 11197018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 23851558 - 23851489
Alignment:
Q  318 tgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatc 389  Q
    ||||| ||||||||||||||||||||||| | |||  | ||||||||||| |||  ||| ||||||||||||    
T  23851558 tgtcgtcttgtgcgacgttgtttgatttcccgtct--tcgtgcggtgttcatttgattcatattgaaagatc 23851489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 29777313 - 29777349
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  29777313 attcaatcaaagatttggacgtcaacattgcagatcc 29777349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 32724471 - 32724435
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  32724471 attcaatcaaagatttgggcgtcaacgttgcagatcc 32724435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 42448017 - 42447981
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  42448017 attcaatcaaagatttgggcgtcaacgttgcagatcc 42447981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 8e-56; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 28476182 - 28476385
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||||||||| |||| |||||||| |||||||||||||||||||||  |||||||||||||||||| |||| ||    
T  28476182 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgta 28476281  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||| ||| ||||| | || | ||||||||||||||||    
T  28476282 ttgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaagtatgggta-ttcggtgatttagattttatc 28476380  T
Q  480 atatt 484  Q
    |||||    
T  28476381 atatt 28476385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 35132902 - 35133106
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||||||||| |||| ||||| || |||||||||||||| ||||  || ||||| ||||||||||| |||| ||    
T  35132902 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgttcggcgttgtttgatttcacatcctttattgtgtggtgttcgtttggttcgta 35133001  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| | ||| |  |||||||||||| |||    
T  35133002 ttgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccaaaagcatgagtattctagtgatttagatttcatc 35133101  T
Q  480 atatt 484  Q
    |||||    
T  35133102 atatt 35133106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 22742899 - 22743103
Alignment:
Q  284 cgtgatttcgtcgtctctg--cggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||  |  || |||||||||||| |||| |||||||| |||||||||||||| ||| ||  ||||||||| |||||||| |||| ||    
T  22742899 cgtgatttcgtcgtcttagttcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacatttttagttgtgcggcgttcgtttggttcgta 22742998  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||| |||||| |||||||| |||||||||||||||||  ||||||||||||||||||| ||| ||| | ||| || |||||||||||| |||    
T  22742999 ttgaaagatcagcttcagccaatcacaaattcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgagtattctggtgatttagatttcatc 22743098  T
Q  480 atatt 484  Q
    |||||    
T  22743099 atatt 22743103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 24350972 - 24350771
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttat 380  Q
    |||||||||||||||   |||| |||||||||||| |||| |||||||| |||||||||||||| ||| ||  ||||||| |||||||||| |||| |||    
T  24350972 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacattttttgttgtgcagtgttcgtttggttcgtat 24350873  T
Q  381 tgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatca 480  Q
    |||||||||| |||||  |||||||| |||||||||||||||||| ||||||||||||||||||| ||| ||||| ||| || ||||||| |||| ||||    
T  24350872 tgaaagatcagcttca--caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtgatttaaatttcatca 24350775  T
Q  481 tatt 484  Q
    ||||    
T  24350774 tatt 24350771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 301 - 482
Target Start/End: Complemental strand, 38880691 - 38880512
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||| |||||||||||||| || ||||| ||||| |||||||||| |||||||||||  |||||||||||| |||||||||||||||||| |||||| ||    
T  38880691 tgcgacgttgtgttgtttgccgtcttgtacgacgctgtttgattttgcatcttgttg--cggtgttcgtttggttcttattgaaagatcagcttcagtca 38880594  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||||| ||||||||||||||||||  | ||||||||||||||   ||| ||| | |||||  | |||||||||||||||||    
T  38880593 atcacaaattcaatcaatgatttgggtgccaacgttgcagatctggaagcatgcgtattttagttatttagattttatcata 38880512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 306 - 483
Target Start/End: Complemental strand, 41553542 - 41553367
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcac 405  Q
    |||||||||||| |||| |||||| |||||| ||||||||||| ||||||| ||  |||||||||| |||| |||||||||||||| ||||| |||||||    
T  41553542 cgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatg--gtgttcgtttggttcatattgaaagatcaatttcagtcaatcac 41553445  T
Q  406 agattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatat 483  Q
    | ||||| | |||||||||||||||||||||||||||||  ||  || |  |||||| ||||||||||||||||||||    
T  41553444 atattcagttaatgatttggacgtcaacgttgcagatccggaaacatagatattttggtgatttagattttatcatat 41553367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 306 - 444
Target Start/End: Complemental strand, 41553887 - 41553751
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcac 405  Q
    |||||||||||| |||| |||||| |||||| ||||||||||| ||||||| ||  |||||||||| |||| |||||||||||||| ||||| |||||||    
T  41553887 cgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatg--gtgttcgtttggttcatattgaaagatcaatttcagtcaatcac 41553790  T
Q  406 agattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    | ||||| | |||||||||||||||||||||||||||||    
T  41553789 atattcagttaatgatttggacgtcaacgttgcagatcc 41553751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 284 - 423
Target Start/End: Complemental strand, 1749283 - 1749140
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||||||||| |||| |||||||| | |||||||||||||||||  ||||||| || ||||||||| |||| ||    
T  1749283 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcgcatcctttgttgtacgatgttcgtttggttcgta 1749184  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgattt 423  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  1749183 ttgaaagatcagcttcagacaatcacaaattcaatcaatgattt 1749140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 307 - 484
Target Start/End: Complemental strand, 35665243 - 35665067
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    |||||||| || ||||  ||||||||||||||||||||| || ||||  | |||||| |||||||  ||| ||| |||||||||||||||| | |||| |    
T  35665243 gttgtgttattcgtcgttttgtgcgacgttgtttgatttggcgtctttgt-tgcggtattcgtttgattcatatcgaaagatcaacttcagtcgatcaga 35665145  T
Q  407 gattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||| ||||||| |||||||| ||| ||| ||| | |||||  |||||||||||||||||||||    
T  35665144 gattcaatcaatgatttgaacgtcaatgttgcagacccataagcatgtgtattttagtgatttagattttatcatatt 35665067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 24069507 - 24069326
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| || | |||||||| |||| |||||||| || | ||||||  ||||||||||||  ||| |||||||| |||| ||||   ||    
T  24069507 tgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgatttggcgtattgttg--cggtgttcgtttgattcatattgaaatatcagcttcgatca 24069410  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||  ||| ||| | ||| || |||||||||||||||||||||    
T  24069409 atcacaggttcaatcaatgatttgaacgtcaacgttgcagacccggaagcatgaggattctggtgatttagattttatcatatt 24069326  T

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Target: chr7; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 306 - 444
Target Start/End: Complemental strand, 41554232 - 41554096
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcac 405  Q
    |||||||||||| |||| |||||| |||||| ||||||||||| ||||||| ||  |||||||||| |||| |||||||| ||||| ||||| |||||||    
T  41554232 cgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatg--gtgttcgtttggttcatattgaaatatcaatttcagtcaatcac 41554135  T
Q  406 agattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    | ||||| | |||||||||||||||||||||||| ||||    
T  41554134 atattcagttaatgatttggacgtcaacgttgcatatcc 41554096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 307 - 484
Target Start/End: Complemental strand, 3224517 - 3224343
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    ||||||||||| || | |||||||||| || ||||||||| | | ||||||  || ||||||||| |||| ||||||| |||||||||||| |||||||     
T  3224517 gttgtgttgttcgtagtcttgtgcgacattatttgatttcacgttttgttg--cgatgttcgtttggttcatattgaaggatcaacttcagtcaatcacg 3224420  T
Q  407 gattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||| |||||||| |||||||| |||| ||||||  ||||||| | ||| || |||||||||||||||||||||    
T  3224419 gattcaattaatgattttgacgtcaa-gttgtagatccggaagaatgagtattatggtgatttagattttatcatatt 3224343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 9450265 - 9450069
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   || |||||||||||||| |||| |||||||| ||||   ||||||||||| |||| |  ||||||| |||  |||| |||||    
T  9450265 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcattttgtcg--cggtgtttgttcagttcctattg 9450171  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||  |||| ||| |||||| ||||||||||||||||||||||||||||||  ||| ||||| |||||  |||||||| ||||||||||    
T  9450170 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtattttagtgatttaggttttatcata 9450071  T

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Target: chr7; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 12141436 - 12141240
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||| |||||||||||| |||||||| | ||   ||||||||| ||||||    ||||||| |||| |||| |||||    
T  12141436 gtgatttcgtcgtctaagtgcggcgttttgttgtttgtcgtcttgtgcggcatt---tgatttcgcgtcttgtca--cggtgtttgtttagttcctattg 12141342  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
     |||||| || |||| |||| ||| |||||| ||||||||||||||||||||||||||||||  ||| ||||| |||| | ||| |||||||||||||||    
T  12141341 gaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttagattttatcata 12141242  T

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Target: chr7; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 42978573 - 42978769
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||| | | || | |  |||||||||||| ||||||||||    
T  42978573 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttctcgttttatcg--cggtgttcgtttagttcttattg 42978667  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||| |||| ||| |||||| ||||||||||| ||||||||||||||||||  ||| ||||| |||| | ||| |||| ||||||||||    
T  42978668 aaagatcgacatcagtcaataacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaaggatgggtatttcggtgacttaggttttatcata 42978767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 37837568 - 37837390
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||| ||||   |||||| || |||||| |  |||||||||||| |||| |||||||||||| || |||| ||    
T  37837568 tgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgtcttgtcg--cggtgttcgtttagttcctattgaaagatcgacatcagtca 37837474  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| ||||||||||| ||||||||||||||||||  ||| ||| | |||| | ||| |||| ||||||||||||    
T  37837473 attacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgtgaatttcggtgacttaggttttatcatatt 37837390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 444
Target Start/End: Original strand, 19296833 - 19296989
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||||| |||| |  ||||||| |||  |||| | |||    
T  19296833 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcattttgtcg--cggtgtttgttcagttcctcttg 19296927  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||||||||||    
T  19296928 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatcc 19296989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 24770209 - 24770405
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||| ||||||||||| |||| ||| |||||||||   ||||||||  |||||| |  ||||||||||||  |||||||||    
T  24770209 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgacgtt---tgatttcgtgtcttgtcg--cggtgttcgtttatttcttattg 24770303  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||||||  | |||| |||||||| |||||| ||||||||||| ||||||||||| ||||||| ||| ||| | |||| |  || |||| ||||||||||    
T  24770304 aaagatcggcatcagtcaatcacaaattcaaccaatgatttgggcgtcaacgttgaagatccagaagcatgtgaatttcggagacttaggttttatcata 24770403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 48316940 - 48316744
Alignment:
Q  285 gtgatttcgtcgtctctg--cggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||  |  ||||||||||||||| |||| |||||||  |   |||||||||||| ||||||   |||||||| |||  |||| |||||    
T  48316940 gtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcagc---gtttgatttcgcgtcttgt--cgcggtgtttgttcagttcctattg 48316846  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||  |||| ||| |||||| |||||||||||||||||||| |||||||||  ||| ||||| |||| |  ||||||| ||||||||||    
T  48316845 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgctgcagatccggaagcatgggtatttcggcgatttaggttttatcata 48316746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 442
Target Start/End: Complemental strand, 5348650 - 5348566
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagat 442  Q
    |||||||||||||| |||| |||||||||||||| ||||  |||| |||||||||||||||||||||| |||| |||||||||||    
T  5348650 tgcggtgttcgtttggttcctattgaaagatcaatttcaatcaattacagattcaatcaatgatttgggcgtcgacgttgcagat 5348566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 442
Target Start/End: Complemental strand, 8001674 - 8001520
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||| ||||||| |||| |||||||| ||||   ||||||||| |||||| |||  ||||| |||  |||| |||||    
T  8001674 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgtg--gtgtttgttcagttcctattg 8001580  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagat 442  Q
    ||||||| || |||  |||| ||| |||||| ||||||||||||||||||||||||||||    
T  8001579 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagat 8001520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 358 - 477
Target Start/End: Original strand, 11343843 - 11343961
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggca 457  Q
    ||||||||| |||| |||| ||||||||||| || ||||| |||| ||| ||| ||| ||||||||||||||||||||||||||||| ||| |||| | |    
T  11343843 tgcggtgtttgtttggttcatattgaaagattaaattcagtcaattacaaatttaattaatgatttggacgtcaacgttgcagatccgaaa-aatgagta 11343941  T
Q  458 ttttgatgatttagatttta 477  Q
    ||||| ||||||| ||||||    
T  11343942 ttttggtgatttatatttta 11343961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 5078437 - 5078348
Alignment:
Q  393 ttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||| ||||||||  |||||| |||||||||||||||||| ||||| |||| |||| ||| | ||||||||||||||||||||||||||    
T  5078437 ttcagtcaatcacaagttcaataaatgatttggacgtcaactttgcatatccgaaagcatgagtattttgatgatttagattttatcata 5078348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 34899735 - 34899539
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| |||  |||| | |||    
T  34899735 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttgtcg--cggtgtttgttcagttcctcttg 34899641  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||||| || |  ||| ||||| |||| | ||| |||  ||||||||||    
T  34899640 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcaaattcggaagcatgggtatttcggtgacttaagttttatcata 34899541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 307 - 484
Target Start/End: Original strand, 5792783 - 5792955
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    ||||||||||| |||  |||||||||||||   ||||||||| ||||||    | |||||||||| |||| |||||||||||| || |||| |||| |||    
T  5792783 gttgtgttgttagtcatcttgtgcgacgtt---tgatttcgcgtcttgtca--cagtgttcgtttagttcctattgaaagatcgacatcagtcaattaca 5792877  T
Q  407 gattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
      || ||||||||||||||||||||||||||||||||   ||| ||  | |||| ||||| ||| |||||||||||||    
T  5792878 agttaaatcaatgatttggacgtcaacgttgcagatctggaagcataagaatttcgatgacttatattttatcatatt 5792955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 444
Target Start/End: Complemental strand, 30756947 - 30756791
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| |||  |||  |||||    
T  30756947 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcg--cggtgtttgttcagtttctattg 30756853  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| ||| |||||| |||| |||||||| ||||||||||||||||    
T  30756852 aaagatctacatcagtcaattacaaattcaaccaataatttggacatcaacgttgcagatcc 30756791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 379 - 484
Target Start/End: Complemental strand, 39171627 - 39171522
Alignment:
Q  379 attgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttat 478  Q
    ||||||||||| || |||  |||| ||| |||||| ||||||||||||||||||||||||||||||  ||| ||||| |||| | ||| |||| ||||||    
T  39171627 attgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttat 39171528  T
Q  479 catatt 484  Q
    ||||||    
T  39171527 catatt 39171522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 39328918 - 39328722
Alignment:
Q  285 gtgatttcgtcgtctctg--cggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||  |  ||||||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| ||||  ||| |||||    
T  39328918 gtgatttcgtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcg--cggtgtttgtttatttcctattg 39328824  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||||||  | |||| |||| ||| |||||| ||||||||||| ||||||||||| |||||| |||| ||| | || | | ||| |||| ||||||||||    
T  39328823 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatctcggtgacttaggttttatcata 39328724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 48061385 - 48061581
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||||| || ||||||| |||| ||| |||||||||   |||||| || |||||| |  ||||||| |||| |||| |||||    
T  48061385 gtgatttcgtcgtctaagtgcggcattttgttgttcgtcgtcttatgcgacgtt---tgattttgcgtcttgtcg--cggtgtttgtttagttcctattg 48061479  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || | || |||| ||| |||||| ||||| ||||  ||||||||||||||||||  ||| ||| | |||| | |||||||| ||||||||||    
T  48061480 aaagatctacattagtcaattacaaattcaaccaatggtttgagcgtcaacgttgcagatccttaagcatgagtatttcggtgatttaggttttatcata 48061579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 449
Target Start/End: Original strand, 3394452 - 3394600
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| ||||||||||| |||| |||||| |  ||||||||||||||  | |  |  ||||||||| |||| | || ||||||| |||||||||||| ||    
T  3394452 tgcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgatttcgtgtgtcttcttgcggtgtttgtttagatcatattgaatgatcaacttcagtca 3394551  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaag 449  Q
    |||||| ||||||||||||||||  ||||| | |||| |||||| ||||    
T  3394552 atcacatattcaatcaatgatttctacgtcgatgttgtagatccgaaag 3394600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 484
Target Start/End: Original strand, 46700049 - 46700194
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||| | |||||| |||  |||||||||| |||| |||||||| ||| || |||| |||  ||| |||||||||||||||||| | ||| ||||    
T  46700049 gtttgatttcacgtcttgtcgtg--gtgttcgtttagttcctattgaaatatcgacatcagtcaactacaaattcaatcaatgatttgggcatcagcgtt 46700146  T
Q  437 gcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||  ||| ||||  |||| | ||| |||||||||||||||||    
T  46700147 gcagatccggaagcatggatatttcggtgacttagattttatcatatt 46700194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 337 - 484
Target Start/End: Complemental strand, 9977283 - 9977142
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| |||||| |  ||||| || ||| |||| |||||||||||| ||||||| |||| ||| |||||| ||||||||||| ||||||||||    
T  9977283 gtttgatttcgcgtcttgtcg--cggtgctcatttagttcctattgaaagatcgacttcagtcaattacaaattcaaacaatgatttgggcgtcaacgtt 9977186  T
Q  437 gcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
        ||||  ||  ||| | |||||||||| |||||||||||||||||    
T  9977185 ----atccggaattatgtgtattttgatgagttagattttatcatatt 9977142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 304 - 484
Target Start/End: Complemental strand, 25287293 - 25287118
Alignment:
Q  304 ggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatc 403  Q
    |||||||||||||| |||| |||||||||| ||   ||||||| |||||||| |  |||||||| |||  |||||||||||||||  || |||  ||||     
T  25287293 ggcgttgtgttgttcgtcgtcttgtgcgacatt---tgatttcacatcttgtcg--cggtgttcatttacttcttattgaaagattgacatcaatcaatt 25287199  T
Q  404 acagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||| |||||||||||||||||  ||||||  || ||||||  |||| ||||  |||| | ||| |||||||||||||||||    
T  25287198 acaaattcaatcaatgatttgagcgtcaatattacagatctgaaagcatggatatttcggtgacttagattttatcatatt 25287118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 443
Target Start/End: Complemental strand, 1769221 - 1769151
Alignment:
Q  373 gttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    |||| |||||||| || | |||||| |||||||||||||||||||||||||| |||| |||||||||||||    
T  1769221 gttcatattgaaaaattatcttcagtcaatcacagattcaatcaatgatttgaacgtgaacgttgcagatc 1769151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 19404885 - 19404689
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||| | ||||| |||| |||||||  ||||   |||||| ||||||||| |  |||||||| ||| |||| | |||    
T  19404885 gtgatttcgtcgtctaagtgcggcgttctattgttcgtcgtcttgtgcatcgtt---tgattttgcatcttgtcg--cggtgttcttttagttcctcttg 19404791  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||  || || | |||| ||| |||||||||||||||||| |||||| |||||||||||  ||| ||| | ||||   ||| |||||||||||||||    
T  19404790 aaagattgacatctgtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcagtgacttagattttatcata 19404691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 45349927 - 45349731
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   || |||||||||||||| ||||  ||||| | ||||   ||||||||| |||||| |  |||||||||||| |||| |||||    
T  45349927 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgttttgtgtggcgtt---tgatttcgcgtcttgtcg--cggtgttcgtttagttcctattg 45349833  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||   | |||| |||| ||| |||||| ||||||||| | ||||||| |||||||||   ||| ||| | |||| | |||||||| ||||||||||    
T  45349832 aaagattggcatcagtcaattacaaattcaagcaatgattttggcgtcaacattgcagatctggaagcatgtgaatttcggtgatttaggttttatcata 45349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 444
Target Start/End: Complemental strand, 13796985 - 13796901
Alignment:
Q  360 cggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||||| |||| |||||||||||| || |||| |||| ||| | |||| ||||||||||  ||||||||||||||||||    
T  13796985 cggtgttcgtttagttcatattgaaagatcgacatcagtcaataacaaagtcaaccaatgatttgaccgtcaacgttgcagatcc 13796901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 443
Target Start/End: Original strand, 39229002 - 39229132
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcaca 406  Q
    ||||||||||| |||| |||||||| ||||    |||||||| ||||||||||  ||   ||||| |||  |||||||||||||||||||| |||| |||    
T  39229002 gttgtgttgttcgtcgtcttgtgcggcgtta---gatttcgcgtcttgttgtgatgt---cgtttggtttctattgaaagatcaacttcagtcaattaca 39229095  T
Q  407 gattcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    ||||||| | |||| |||| |||| ||||||||||||    
T  39229096 gattcaaccgatgacttgggcgtcgacgttgcagatc 39229132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 425
Target Start/End: Complemental strand, 24610256 - 24610161
Alignment:
Q  332 acgttgtttgatttcgcat-cttgttgt-gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttgg 425  Q
    ||||||||||||||||||| | | |||| ||||||||||||| |||| |||| ||| ||||  ||||| | |||||||||||||||||||||||||    
T  24610256 acgttgtttgatttcgcatgcgtcttgttgcggtgttcgtttagttcatattaaaatatcagtttcagtcgatcacagattcaatcaatgatttgg 24610161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 397
Target Start/End: Complemental strand, 26623900 - 26623809
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcag 397  Q
    ||||||||||||||||| |||| ||||| || ||||   |||||| |||||||||||  ||||||| |||| |||| ||||||||||||||||||||    
T  26623900 tgcggcgttgtgttgttcgtcgtcttgtacggcgtt---tgattttgcatcttgttg--cggtgtttgtttggttcctattgaaagatcaacttcag 26623809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 407 - 480
Target Start/End: Original strand, 2407243 - 2407315
Alignment:
Q  407 gattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatca 480  Q
    ||||||||| |||||| | ||| |||||||||||||||||||| ||  ||||| ||||||||||||||||||||    
T  2407243 gattcaatctatgattag-acgccaacgttgcagatccaaaagcataagcattctgatgatttagattttatca 2407315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 28044813 - 28044688
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| |||  ||||||||||||||||| |  |||  |||| | | |||||| || ||||||| |||||||||||||||||||  ||  ||||| ||    
T  28044813 gcggtgtttgttcagttcttattgaaagatctatatcaatcaattataaattcaagcattgatttgaacgtcaacgttgcagatccggaaacatgggtat 28044714  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | |||||||| ||||||||||||    
T  28044713 ttcggtgatttaggttttatcatatt 28044688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 388
Target Start/End: Original strand, 25068063 - 25068147
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagat 388  Q
    ||||||||||||||||| ||||| |||||||  ||| ||| |||| |||||||||||  |||||||||||| |||| |||||||||||    
T  25068063 tgcggcgttgtgttgttcgtcgc-ttgtgcggtgtttttttattttgcatcttgttg--cggtgttcgttttgttcctattgaaagat 25068147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 442
Target Start/End: Original strand, 27997069 - 27997205
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||| |||||||||| |||  ||||||| || |||||| |||| |||||||||  ||| ||||||||||  ||| |||||||||||||||||    ||    
T  27997069 tgcggcattgtgttgttcgtcatcttgtgcaacattgttttattttgcatcttgt--tgcagtgttcgtttgattcatattgaaagatcaactt---tca 27997163  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagat 442  Q
    || | | ||| | |||||||||||| ||| ||||||||||||    
T  27997164 attataaattaagtcaatgatttgggcgtgaacgttgcagat 27997205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 416
Target Start/End: Complemental strand, 29617781 - 29617700
Alignment:
Q  333 cgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatca 416  Q
    |||||||||||||||| |||||||||   ||||| ||||  ||| ||||||||||||||||| ||||||| ||||||| |||||    
T  29617781 cgttgtttgatttcgcgtcttgttgta--gtgtttgtttgattcgtattgaaagatcaactttagacaattacagattaaatca 29617700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 22087370 - 22087429
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttg 437  Q
    |||||||||||||||||||| |||| ||| ||||||||||||| ||||  ||||||||||    
T  22087370 tattgaaagatcaacttcagtcaattacaaattcaatcaatgacttgggtgtcaacgttg 22087429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 484
Target Start/End: Original strand, 38798834 - 38798940
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    ||||||||||||  | |||| |||| ||| |||||| ||||||||||| ||||||| ||| ||||||  ||| ||| | |||| | ||| ||||||||||    
T  38798834 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgaagatccggaagcatgtgaatttcggtgacttagatttta 38798933  T
Q  478 tcatatt 484  Q
    |||||||    
T  38798934 tcatatt 38798940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 46822762 - 46822712
Alignment:
Q  392 cttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagat 442  Q
    |||||| ||||||||  ||||||||||||||| ||||||||||||||||||    
T  46822762 cttcagtcaatcacatgttcaatcaatgatttagacgtcaacgttgcagat 46822712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 444
Target Start/End: Original strand, 47590292 - 47590430
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||| ||||   |||||| || |||||  |  ||||||| || |  ||| |||||||||||| || || | ||    
T  47590292 tgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgtcttgccg--cggtgtttgtataattcctattgaaagatctacatccgtca 47590386  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || ||| |||||| ||||||||||| ||||||||||||| ||||    
T  47590387 attacaaattcaaccaatgatttgggcgtcaacgttgcacatcc 47590430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 421
Target Start/End: Original strand, 5775184 - 5775301
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||||||||||||||  ||| ||| |||| | || ||||||||||| ||||||  ||| ||||| |||| |||| ||| |||||||||  ||||| ||    
T  5775184 tgcggcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgt--tgcagtgtt-gtttggttcatatcgaaagatcagattcagtca 5775280  T
Q  401 atcacagattcaatcaatgat 421  Q
    |||||| | ||||||||||||    
T  5775281 atcacataatcaatcaatgat 5775301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 306 - 478
Target Start/End: Original strand, 11653865 - 11654040
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgttt-gatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatca 404  Q
    |||||||||||| |||| |||| | ||| || ||| |||||||| |||||| |||  ||| |||||| |||  |||||||||||||| || || ||||||    
T  11653865 cgttgtgttgttcgtcgtcttgcgagacctttttttgatttcgcgtcttgtagtg--gtgctcgttttgtttctattgaaagatcaattttagtcaatca 11653962  T
Q  405 ----cagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttat 478  Q
        ||||| |||| |||||||||  ||||||||||||| |||  ||  || ||| ||| ||||||||||||||||||    
T  11653963 attacagatacaattaatgatttgagcgtcaacgttgcaaatcagaagcaaggggaattctgatgatttagattttat 11654040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 483
Target Start/End: Original strand, 25255260 - 25255385
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggca 457  Q
    |||||||||| ||| |||| ||| ||||  |||||||||  |||| | ||||||||||||| |||||| | || | |||||||||||  ||| |||||||    
T  25255260 tgcggtgttcatttagttcctatcgaaatgtcaacttcaatcaattatagattcaatcaattatttgggcatcgatgttgcagatcctgaagcatgggca 25255359  T
Q  458 ttttgatgatttagattttatcatat 483  Q
    ||||  ||| ||||| ||||| ||||    
T  25255360 ttttagtgacttagagtttataatat 25255385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 483
Target Start/End: Complemental strand, 28062261 - 28062156
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    |||||||||||| || |||  |||| | | |||||| |||||||||||||||||| ||||||||||| |||| || |  |||| | |||||||  |||||    
T  28062261 tattgaaagatctacatcaatcaattataaattcaagcaatgatttggacgtcaatgttgcagatccgaaagtatagatatttcggtgatttatgtttta 28062162  T
Q  478 tcatat 483  Q
    ||||||    
T  28062161 tcatat 28062156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 355 - 484
Target Start/End: Original strand, 40993187 - 40993316
Alignment:
Q  355 ttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgg 454  Q
    |||||||||||| |||  |||| |||||||||||| || |||| |||| ||| ||||||  || ||||||||  ||||||||||| || || ||| ||||    
T  40993187 ttgtgcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaacaaaagatttggatttcaacgttgcatattcagaagcatgg 40993286  T
Q  455 gcattttgatgatttagattttatcatatt 484  Q
    | |||| | ||| |||  ||||||||||||    
T  40993287 gtatttcggtgacttaagttttatcatatt 40993316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 484
Target Start/End: Complemental strand, 969557 - 969391
Alignment:
Q  304 ggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatc 403  Q
    |||||||||||||| |||| ||| |||| ||||||||||||| || |||| |  ||||||||| |||| |||| |||||||| |||| ||| ||          
T  969557 ggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttat--tgcggtgtttgtttggttcatattgaaaaatcatctttag------ 969466  T
Q  404 acagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
          ||||| |||||||||||||||||  |||||||| || ||| ||| | ||| |  |||||||||||||||||||||    
T  969465 ------tcaattaatgatttggacgtcaatattgcagattcataagcatgagtattctagtgatttagattttatcatatt 969391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 4530131 - 4530235
Alignment:
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    |||||||||||||||||| || | ||| |||||||| | ||||| | ||| ||||||| | ||||| ||| ||||| |||||  | | ||||||||||||    
T  4530131 ttgaaagatcaacttcagtcagttacaaattcaatccaagatttaggcgtaaacgttggatatccagaagcatgggtatttttgtaacttagattttatc 4530230  T
Q  480 atatt 484  Q
    |||||    
T  4530231 atatt 4530235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 22927860 - 22927824
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  22927860 attcaatcaaagatttggacgtcaacgttgcagatcc 22927824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 25067981 - 25068021
Alignment:
Q  218 tttctctttctttcaatctaaataagtgatttccatatata 258  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  25067981 tttctatttctttcaatctaaataagtgatttccacatata 25068021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 44311991 - 44311951
Alignment:
Q  218 tttctctttctttcaatctaaataagtgatttccatatata 258  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  44311991 tttctctttctttcaatctaaataagtggtttccacatata 44311951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 351
Target Start/End: Original strand, 48930730 - 48930797
Alignment:
Q  286 tgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc 351  Q
    ||||||||||||||   |||| ||||||||| || |||| |||||||| |||||||||||||||||||    
T  48930730 tgatttcgtcgtcttagtgcgacgttgtgttattcgtcgtcttgtgcggcgttgtttgatttcgcatc 48930797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 484
Target Start/End: Complemental strand, 5000072 - 4999961
Alignment:
Q  373 gttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttaga 472  Q
    |||| |||| ||| ||||| ||||| |||| ||| ||||||||||| |||||||| |||||||||| ||||   ||| |||   ||| || ||||||| |    
T  5000072 gttcatattaaaatatcaatttcagtcaattacaaattcaatcaattatttggacttcaacgttgctgatctggaagcatgaatattctggtgatttaaa 4999973  T
Q  473 ttttatcatatt 484  Q
    ||||||||||||    
T  4999972 ttttatcatatt 4999961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 484
Target Start/End: Original strand, 48930795 - 48930866
Alignment:
Q  413 atcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||  |||||||||||||||||| ||  || || ||| || |||||||||||| ||||||||    
T  48930795 atcaatgatttgggtgtcaacgttgcagatccagaaacattggtattctggtgatttagatttcatcatatt 48930866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 29844825 - 29844874
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcg 331  Q
    ||||||||||| |||||  |||||||||||||||||||||| ||||||||    
T  29844825 cgtgatttcgttgtctcaatgcggcgttgtgttgtttgtcgtcttgtgcg 29844874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 44311904 - 44311846
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtg 359  Q
    |||| |||||| ||||| |||| ||| ||||||||||||||||||| ||| ||||||||    
T  44311904 tgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgatttcacattttgttgtg 44311846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 35665326 - 35665285
Alignment:
Q  218 tttctctttctttcaatctaaataagtgatttccatatatat 259  Q
    |||||||||||||| |||||||||||||||||| | ||||||    
T  35665326 tttctctttctttcgatctaaataagtgatttcgaaatatat 35665285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 433681 - 433645
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  433681 attcaatcaaagatttggacgttaacgttgcagatcc 433645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 1448820 - 1448784
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| |||||||| |||||||||||||||||    
T  1448820 attcaatcaaagatttggatgtcaacgttgcagatcc 1448784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 1485247 - 1485211
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  1485247 attcaatcaaagatttggacgtcaacattgcagatcc 1485211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 4121772 - 4121740
Alignment:
Q  325 ttgtgcgacgttgtttgatttcgcatcttgttg 357  Q
    ||||||||| |||||||||||||||||||||||    
T  4121772 ttgtgcgacattgtttgatttcgcatcttgttg 4121740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 6558964 - 6559000
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  6558964 attcaatcaaagatttgggcgtcaacgttgcagatcc 6559000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 19560085 - 19560121
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  19560085 attcaatcaaagatttggacgtcaaccttgcagatcc 19560121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 26492452 - 26492488
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  26492452 attcaatcaaagatttgggcgtcaacgttgcagatcc 26492488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 42067052 - 42067016
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  42067052 attcaatcaaagatttgggcgtcaacgttgcagatcc 42067016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 42311367 - 42311403
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  42311367 attcaatcaaagatttggccgtcaacgttgcagatcc 42311403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 42408449 - 42408485
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  42408449 attcaatcaaagatttgggcgtcaacgttgcagatcc 42408485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 45199023 - 45198987
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  45199023 attcaatcaaagatttgggcgtcaacgttgcagatcc 45198987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 8e-56; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 48750160 - 48750345
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttattgaaagatcaacttcaga 398  Q
    |||| |||||||||||| |||| ||||||||||||||||||||||||||||||  ||||||||||||||||||  ||| ||||||||||||| |||||||    
T  48750160 tgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgattcgtattgaaagatcagcttcaga 48750259  T
Q  399 caatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||||| ||| ||||| ||| || |||||||||||| ||||||||    
T  48750260 caatcacaaatttaatcaatgatttgggcgtcaacgttgcagatccataagcatgggtattctggtgatttagatttcatcatatt 48750345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 327 - 484
Target Start/End: Complemental strand, 37720240 - 37720081
Alignment:
Q  327 gtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttg 424  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||| |||| ||||||||||||||||||||||||||||| ||||| | |||||||||    
T  37720240 gtgcgacgttgtttgatttcgcatcttttgttgtgtggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcatttaatgatttg 37720141  T
Q  425 gacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    | ||||||||||||||||||||||| ||||| ||| || | |||||||||||||||||||    
T  37720140 ggcgtcaacgttgcagatccaaaagcatgggtattctggttatttagattttatcatatt 37720081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 308 - 484
Target Start/End: Original strand, 24582937 - 24583110
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    ||||||||||  |||||||||||| ||||||||||||| |||||||||||  |||||||||||  |||| ||||||||||||| |||||| |||||||||    
T  24582937 ttgtgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttg--cggtgttcgttg-gttcatattgaaagatcagcttcagtcaatcacag 24583033  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |   ||| || ||||||||||| |||||||||    
T  24583034 attcaatcaatgatttggacgtcaacgttgcagatccagaagcaagaatattctggtgatttagattatatcatatt 24583110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 47132863 - 47133063
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttatt 381  Q
    ||||||||||||||||   || |||||||||||||| ||||  ||||||| |||||||| ||||||| ||||||||  ||||||||||||  ||| ||||    
T  47132863 cgtgatttcgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttg--cggtgttcgtttgcttcatatt 47132960  T
Q  382 gaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||  ||| ||| | ||| || |||||||||||| |||||    
T  47132961 gaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtgatttagatttcatcat 47133060  T
Q  482 att 484  Q
    |||    
T  47133061 att 47133063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 36775827 - 36775642
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttattgaaagatcaacttcaga 398  Q
    |||| |||||||||||| |||| |||||||   ||||||||||||||||||||  |||||||||| ||||||| |||| ||||||||||||  |||||||    
T  36775827 tgcgacgttgtgttgttcgtcgtcttgtgcagtgttgtttgatttcgcatcttttgttgtgcggtattcgtttggttcgtattgaaagatcggcttcaga 36775728  T
Q  399 caatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| ||  ||||| ||   | |||||||||||| ||||||||    
T  36775727 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacatgggtatcccggtgatttagatttcatcatatt 36775642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 308 - 484
Target Start/End: Complemental strand, 34413200 - 34413024
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcac 405  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||  ||||||||||||||||||  ||  ||||||||||||| || |||||||||||    
T  34413200 ttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgatttgtattgaaagatcagctccagacaatcac 34413101  T
Q  406 agattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    | ||||||||||| |  ||||||||||||||| ||||||| ||| ||||| ||| || |||||||||||| ||||||||    
T  34413100 aaattcaatcaataa--tggacgtcaacgttgtagatccagaagcatgggtattctggtgatttagatttcatcatatt 34413024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 285 - 481
Target Start/End: Original strand, 49626875 - 49627070
Alignment:
Q  285 gtgatttcgtcgtctctg--cggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    ||||||||||||||| ||  || | |||||||||| |||| |||||||| |||||||||||||  ||||||||||  |||||||||||  |||| |||||    
T  49626875 gtgatttcgtcgtctatgtgcgaccttgtgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttg--cggtgttcgttg-gttcatattg 49626971  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||| || ||| | | | ||| |||||||||||||| ||||||    
T  49626972 aaagatcagcttcagtcaatcacaaattcaatcaatgatttggacgtcaacgttgcagatgcagaagcaagagtattctgatgatttagattatatcat 49627070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 284 - 436
Target Start/End: Original strand, 16161794 - 16161950
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||||||||| |||| |||||||| |||||||||||||| ||||||  |||||||||||||||||| |||| ||    
T  16161794 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacatcttttgttgtgcggtgttcgtttggttcgta 16161893  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    ||||||||||| ||| ||||||||||| ||||| |||||||||||| ||||||||||    
T  16161894 ttgaaagatcagcttaagacaatcacaaattcattcaatgatttgggcgtcaacgtt 16161950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 301 - 481
Target Start/End: Original strand, 41994406 - 41994584
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||||||||||||||  ||| |||||||  ||||||||||||||| |||||||||||  ||||||||||||||| |||||||||||||  ||||| ||    
T  41994406 tgcggcgttgtgttgttcatcgtcttgtgcagcgttgtttgatttcggatcttgttgtg--gtgttcgtttcgttcatattgaaagatcagtttcagtca 41994503  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    |||| | ||| |||||||||||||||||||||||||||  ||||  ||||| | | ||| || ||||||||||||||||||    
T  41994504 atcaaatatttaatcaatgatttggacgtcaacgttgctaatccggaagaacgagtattctggtgatttagattttatcat 41994584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 44543234 - 44543432
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||| | |||||||||| ||||  || |||| ||||||||||||| ||||||| |||  |||||||||||  |||| |||||    
T  44543234 gtgatttcgtcgtctaagtgcgactttgtgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattg--cggtgttcgttg-gttcatattg 44543330  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||| | | | ||| |  ||||||||||| |||||||    
T  44543331 aaagatcagctttagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctagtgatttagattatatcata 44543430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 325 - 481
Target Start/End: Original strand, 16262864 - 16263018
Alignment:
Q  325 ttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttg 424  Q
    ||||||| |||||||||||||||| ||||||||||  ||||||||||  ||| |||||||| ||||||| ||| |||||||| |||||||||||||||||    
T  16262864 ttgtgcggcgttgtttgatttcgcgtcttgttgtg--gtgttcgtttgattcatattgaaaaatcaactgcagtcaatcacatattcaatcaatgatttg 16262961  T
Q  425 gacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
      | ||||||||||||||||  ||| ||| | ||| |||||||||||||||||||||    
T  16262962 tgcatcaacgttgcagatccggaagcatgagtattctgatgatttagattttatcat 16263018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 14872622 - 14872799
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||| |||||||||| |||| |||||||| ||||   ||||||||| |||||| |  |||||||| ||| ||||| ||||||||||| || |||| ||    
T  14872622 tgcggcattgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcg--cggtgttcatttagttct-attgaaagatcgacatcagtca 14872715  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| ||||||||||| ||||||||||||||||||  ||| ||||| |||||| ||| |||| ||||||||||||    
T  14872716 attacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgggtattttggtgacttaggttttatcatatt 14872799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 338 - 484
Target Start/End: Original strand, 3228285 - 3228429
Alignment:
Q  338 tttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttg 437  Q
    |||||||||||||||||| |  ||||||| |||| |||| |||||||||||| |  |||| |||| ||| || ||||||||||||||| |||||||||||    
T  3228285 tttgatttcgcatcttgtcg--cggtgtttgtttagttcctattgaaagatcgatatcagtcaattacaaatacaatcaatgatttgggcgtcaacgttg 3228382  T
Q  438 cagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||| |||  ||||  |||| |||||||||| ||||||||||||    
T  3228383 cagatccgaaatcatggatatttcgatgatttaggttttatcatatt 3228429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 19060871 - 19061069
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||| | |||||||||| |||| |||||| | |||||||||||||  ||||||||||  | |||||||||  |||| |||||    
T  19060871 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgtggcgttgtttgatttgacatcttgttg--cagtgttcgttg-gttcatattg 19060967  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||||| | |||||| ||||||||| |||||||||| |||||||| |||| |||| ||||||| ||| | | | ||| || ||||||||||| |||||||    
T  19060968 aaagattagcttcagtcaatcacaggttcaatcaataatttggacatcaatgttgtagatccagaaggaagagtattctggtgatttagattatatcata 19061067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 301 - 423
Target Start/End: Original strand, 34528709 - 34528829
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||| |||||||||| |||| |||| |||  |||||||||||||||||||||||   |||||||  ||| |||  |||||||||||||||||||| ||    
T  34528709 tgcggcattgtgttgttcgtcgtcttgcgcggtgttgtttgatttcgcatcttgttt--cggtgtttctttggtttatattgaaagatcaacttcagtca 34528806  T
Q  401 atcacagattcaatcaatgattt 423  Q
    |||||||||||||||||||||||    
T  34528807 atcacagattcaatcaatgattt 34528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 7337773 - 7337595
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| ||||||| |||||   ||||||||| |||||| |  ||||||| |||  |||| |||||||||||| || |||  ||    
T  7337773 tgcggcgttgtgttgttcgtcgtcttgtgcaacgtt---tgatttcgcgtcttgtcg--cggtgtttgttcagttcatattgaaagatctacatcaatca 7337679  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| |||||||||| |||||||||||||||||||  ||| ||||| |||| | |||||| | ||||||||||||    
T  7337678 attacaaattcaagcaatgatttgcacgtcaacgttgcagatccggaagcatgggtatttcggtgattttggttttatcatatt 7337595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 324 - 439
Target Start/End: Complemental strand, 6217917 - 6217804
Alignment:
Q  324 cttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgattt 423  Q
    |||||||||||||||||||||| || ||||||| ||   ||||||||| ||   |||||||||||||||||||| |||||||| ||||||||||||||||    
T  6217917 cttgtgcgacgttgtttgattttgcgtcttgttatgt--tgttcgtttggtatatattgaaagatcaacttcagtcaatcacaaattcaatcaatgattt 6217820  T
Q  424 ggacgtcaacgttgca 439  Q
    ||| |||||| |||||    
T  6217819 ggatgtcaacattgca 6217804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 12635149 - 12635330
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||  | | |||| ||  ||||||| ||| |||| ||||||||||||||||| ||  |    
T  12635149 tgcggcgttgtgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagt--ggtgttcatttggttcatattgaaagatcaactttagtaa 12635246  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||| ||||||||||||||||| |||||| | || || |||   ||| ||||| ||| ||  |||||| |||||||||||||    
T  12635247 atcacaaattcaatcaatgatttgcacgtcagcctttcatatcacgaagcatgggtattctggcgatttatattttatcatatt 12635330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 337 - 444
Target Start/End: Complemental strand, 21947695 - 21947590
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| |||||| |  ||||||| |||| ||||||||||||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||    
T  21947695 gtttgatttcgcgtcttgtcg--cggtgtttgtttagttcttattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgtt 21947598  T
Q  437 gcagatcc 444  Q
    ||||||||    
T  21947597 gcagatcc 21947590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 449
Target Start/End: Original strand, 1742245 - 1742406
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||||||||   ||||||||| |||||| |||  ||||||||||  ||| |||||    
T  1742245 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtt---tgatttcgcgtcttgtcgtg--gtgttcgtttatttcctattg 1742339  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaag 449  Q
    |||||||  | |||  |||| ||| |||||| ||||||||||| ||||||||||| |||||| ||||    
T  1742340 aaagatcggcatcaatcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaag 1742406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 358 - 480
Target Start/End: Original strand, 18939354 - 18939475
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggca 457  Q
    |||||||||| ||| ||| ||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||||   ||| ||| | |    
T  18939354 tgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttggacgtcgacgttgcagatctggaagcatgtgta 18939452  T
Q  458 ttttgatgatttagattttatca 480  Q
    ||||| ||| ||||| |||||||    
T  18939453 ttttggtgacttagaatttatca 18939475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 35484501 - 35484323
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||| | ||   || |||||| |||||| |  ||||||| |||   ||| |||||||||||| || |||  ||    
T  35484501 tgcggcgttgtgttgttcgtcgtcttgtgcgtcatt---tgctttcgcgtcttgtcg--cggtgtttgttcaattcctattgaaagatctacatcaatca 35484407  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| |||||||||||||||||||||||||||||| |||| ||||| |||| | |||||| | ||||||||||||    
T  35484406 attacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgggtatttcggtgatttcggttttatcatatt 35484323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 5983800 - 5983996
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||| ||||||| |||| |||||||| ||||   ||||||||  |||||| |  ||||||| |||| |||| |||||    
T  5983800 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgtgtcttgtcg--cggtgtttgtttagttcctattg 5983894  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||| |||| ||| |||||| ||||||||||| |||||||| |||||||||  ||| ||||| |||| | ||| |||  ||||||||||    
T  5983895 aaagatctacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgctgcagatccggaagcatgggtatttcggtgacttatgttttatcata 5983994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 359 - 444
Target Start/End: Original strand, 44915674 - 44915759
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||| ||| |||||||||||||||||| |||||| |||||||||||    
T  44915674 gcggtgttcgtttagttcatattgaaagatcaacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatcc 44915759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 27580185 - 27580060
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    ||||||||| ||| |||| |||||||||||| |||||||  ||| ||| ||||||| |||||||||| ||||||| |||||||| | |||| ||| | ||    
T  27580185 gcggtgttcatttagttcctattgaaagatcgacttcagtaaattacaaattcaataaatgatttgggcgtcaacattgcagattcgaaagcatgagtat 27580086  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||||||||||||||||    
T  27580085 ttcggtgacttagattttatcatatt 27580060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 45415522 - 45415718
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||| ||||||| |||| |||||||  ||||   ||||||||| |||||| |  ||||||| |||  |||| |||||    
T  45415522 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcatcgtt---tgatttcgcgtcttgtcg--cggtgtttgttcagttcctattg 45415616  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||  |||| ||| | |||| ||||||||||||||||||||||||||||||  ||| || || |||| | ||| |||| ||||||||||    
T  45415617 aaagatctacatcaatcaattacaaactcaagcaatgatttggacgtcaacgttgcagatccggaagcataggtatttcggtgacttaggttttatcata 45415716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 437
Target Start/End: Complemental strand, 7836906 - 7836775
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||||||||   ||||||||| |||||| |  ||| ||||||||  ||| ||| |||||||| || |||| ||    
T  7836906 tgcggcgttgtgttgttcgtcgtcttgtgcgacgtt---tgatttcgcgtcttgtcg--cggcgttcgtttatttcctatcgaaagatcgacatcagtca 7836812  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttg 437  Q
    || ||| |||||| ||||||||||| |||||||||||    
T  7836811 attacaaattcaaccaatgatttgggcgtcaacgttg 7836775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 481
Target Start/End: Complemental strand, 10776571 - 10776396
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| ||| |||| ||||   |||||  || |||||| |  ||||||||||||  ||| | |||||||||| || |||| ||    
T  10776571 tgcggcgttgtgttgttcgtcgtcttatgcggcgtt---tgattgtgcgtcttgtcg--cggtgttcgtttacttccttttgaaagatcgacatcagtca 10776477  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    || ||| || ||||||||||||||||||||||| ||||||||||| ||| ||| | |||| | ||| |||| |||||||||    
T  10776476 attacaaatccaatcaatgatttggacgtcaacattgcagatccagaagcatgagtatttcggtgacttaggttttatcat 10776396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 484
Target Start/End: Original strand, 43412428 - 43412534
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    |||||||| ||| | ||||  ||||| || ||||||||||||||||| | |||||||||||||||||| ||| ||| | |||||| |||| |||||||||    
T  43412428 tattgaaatatctatttcaatcaatcgcatattcaatcaatgatttgaaagtcaacgttgcagatccagaagcatgcgtattttggtgatctagatttta 43412527  T
Q  478 tcatatt 484  Q
    |||||||    
T  43412528 tcatatt 43412534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 484
Target Start/End: Original strand, 32395033 - 32395158
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| |||  |||| |||||||||||| || |||  |||| ||| |||||| |||||||||||||||||||||||||||| | |||| ||||| ||    
T  32395033 gcggtgtttgttcagttcctattgaaagatctacatcattcaattacaaattcaaccaatgatttggacgtcaacgttgcagattcgaaagcatgggtat 32395132  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||  ||||||||||||    
T  32395133 ttcggtgacttaagttttatcatatt 32395158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 430
Target Start/End: Original strand, 27456522 - 27456646
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||  ||||||| |||||   ||||||||| |||||| |  |||||||||||| |||| |||||||||||| || |||| ||    
T  27456522 tgcggcgttgtgttgttagtcatcttgtgcaacgtt---tgatttcgcgtcttgtcg--cggtgttcgtttagttcctattgaaagatcgacatcagtca 27456616  T
Q  401 atcacagattcaatcaatgatttggacgtc 430  Q
    || |||  ||||||||||||||||| ||||    
T  27456617 attacaagttcaatcaatgatttgggcgtc 27456646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 483
Target Start/End: Complemental strand, 31692568 - 31692400
Alignment:
Q  312 gttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattc 411  Q
    ||||||||||| ||||||||  |||||||||||| || ||||||||  |||||||||||  |||| ||||||||||| | ||| || |||| ||| |||     
T  31692568 gttgtttgtcgtcttgtgcggtgttgtttgattttgcttcttgttg--cggtgttcgttg-gttcatattgaaagattagctttagtcaataacaaattt 31692472  T
Q  412 aatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatat 483  Q
    |||||||||||| || ||||| |||| |||||| |||| |||   |||||| ||| ||  ||||||||||||    
T  31692471 aatcaatgatttcgatgtcaatgttgtagatccgaaagtatgcatattttggtgaattttattttatcatat 31692400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 23291770 - 23291574
Alignment:
Q  285 gtgatttcgtcgtctctg--cggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||  |  |||||||||||||||  |   |||||||||||||   ||||||||| |||||| |  ||||||||||||  ||| |||||    
T  23291770 gtgatttcgtcgtctaagtacggcgttgtgttgttcattatcttgtgcgacgtt---tgatttcgcttcttgtcg--cggtgttcgtttatttcctattg 23291676  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||||||  | |||| |||| ||| |||||| ||||||||||| | ||||||||| ||||||  ||| ||| | |||| | ||| |||| ||||||||||    
T  23291675 aaagatcggcatcagtcaattacaaattcaaccaatgatttgggcatcaacgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcata 23291576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 443
Target Start/End: Original strand, 25564064 - 25564117
Alignment:
Q  390 aacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  25564064 aacttcagtcaatcacagattcaatcaatgatttgggcgtcaacattgcagatc 25564117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 482
Target Start/End: Complemental strand, 13144939 - 13144746
Alignment:
Q  286 tgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattga 383  Q
    ||||||||||||||   |||||||||||||||| ||| | ||||||| || ||   ||||||||| |||||| ||   |||||| |||  ||| ||||||    
T  13144939 tgatttcgtcgtctaaatgcggcgttgtgttgtctgttgtcttgtgcaacatt---tgatttcgcgtcttgtcgta--gtgttcatttgattcatattga 13144845  T
Q  384 aagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||| | |||| |  |||| ||| |||||||||||||||||||||||||  |||||||||  |||| ||| | ||||   ||| |||||||||||||||    
T  13144844 aagaccgactttaatcaattacaaattcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttcagtgacttagattttatcata 13144746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 484
Target Start/End: Complemental strand, 32873918 - 32873796
Alignment:
Q  362 gtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcatttt 461  Q
    |||||||||| |||| ||||||| || | ||||||| |||| ||| ||| ||||||||||||   |||||| |||||||||||| ||  ||||| ||||     
T  32873918 gtgttcgtttagttcctattgaatgaccgacttcagtcaattacacatttaatcaatgatttaagcgtcaatgttgcagatccagaaacatgggtatttc 32873819  T
Q  462 gatgatttagattttatcatatt 484  Q
    ||| | || ||||||||||||||    
T  32873818 gatcactttgattttatcatatt 32873796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 444
Target Start/End: Original strand, 45789575 - 45789661
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||| |||| |||| |||| |||||||| |||||||| |  |||| |||||||||||||||||||||| |||| |||||| ||||||    
T  45789575 tgcgatgtttgtttggttcctattgaaatatcaactttaatcaattacagattcaatcaatgatttgggcgtcgacgttgtagatcc 45789661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 445
Target Start/End: Original strand, 31919003 - 31919109
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| |||||| |  | |||||||||| |||| | |||||||||| || |||| |||| |||  ||||||||||||||||  | ||||||||    
T  31919003 gtttgatttcgcgtcttgtcg--cagtgttcgtttagttcctgttgaaagatcgacatcagtcaattacaagttcaatcaatgatttgagcatcaacgtt 31919100  T
Q  437 gcagatcca 445  Q
    |||||||||    
T  31919101 gcagatcca 31919109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 484
Target Start/End: Complemental strand, 32679158 - 32679073
Alignment:
Q  399 caatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||||||||| |||||||||||| |||| ||||| ||||  ||| ||| | ||| || |||||||||||| ||||||||    
T  32679158 caatcacagattcaatcgatgatttggacgccaacattgcaaatccggaagcatgagtattatggtgatttagatttcatcatatt 32679073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 487
Target Start/End: Original strand, 39888236 - 39888345
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    |||||||||||| ||||||| |||| |||  ||||||||||||||||| |||| |||||| |||||| |  | |  || |||| | ||| ||||||||||    
T  39888236 tattgaaagatcgacttcagtcaattacaacttcaatcaatgatttgggcgtccacgttgtagatccgagcgcacaggtatttcggtgacttagatttta 39888335  T
Q  478 tcatattctt 487  Q
    ||||||||||    
T  39888336 tcatattctt 39888345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 444
Target Start/End: Complemental strand, 34878386 - 34878250
Alignment:
Q  303 cggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaat 402  Q
    ||||||||||||||| |||| ||||||||    ||||||||||||| | |||| |  ||||||| |||   ||| ||||||||||||  | |||| ||||    
T  34878386 cggcgttgtgttgttcgtcgtcttgtgcgg---tgtttgatttcgcgttttgtcg--cggtgtttgttaatttcctattgaaagatcggcatcagtcaat 34878292  T
Q  403 cacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
     ||| |||||| ||||||||||| ||||||||||| ||||||    
T  34878291 tacaaattcaaccaatgatttgggcgtcaacgttgaagatcc 34878250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 483
Target Start/End: Complemental strand, 51916715 - 51916599
Alignment:
Q  364 gttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttga 463  Q
    |||||||| |||| ||||||||||  ||| |||| |||| ||| |||||||||||||||||  |||||||||||||||| |  ||| ||| | |||| |     
T  51916715 gttcgtttagttcctattgaaaga--aacgtcagtcaattacaaattcaatcaatgatttgagcgtcaacgttgcagatacggaagcatgagtatttcg- 51916619  T
Q  464 tgatttagattttatcatat 483  Q
    ||| ||||||||||||||||    
T  51916618 tgacttagattttatcatat 51916599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 444
Target Start/End: Original strand, 1602087 - 1602209
Alignment:
Q  319 gtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaat 418  Q
    |||| ||| |||||||||||||||||| |||||||||  ||||| ||||||||  ||  |||||||||||| |||| || |||| |||  ||||||||||    
T  1602087 gtcgtcttctgcgacgttgtttgattttgcatcttgt--tgcggcgttcgtttgatttctattgaaagatcgactt-agtcaattacaatttcaatcaat 1602183  T
Q  419 gatttggacgtcaacgttgcagatcc 444  Q
    ||||| | | |||| |||||| ||||    
T  1602184 gatttaggcatcaatgttgcatatcc 1602209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 24597350 - 24597296
Alignment:
Q  390 aacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||| |||| | | |||||||||||||||||||||||||||||| ||||||    
T  24597350 aacttcagtcaattataaattcaatcaatgatttggacgtcaacgttgtagatcc 24597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 31984247 - 31984321
Alignment:
Q  410 tcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||| ||||||||||||| ||||  ||| ||||| |||| | ||| |||| ||||||||||||    
T  31984247 tcaatcaatgatttgggcgtcaacgttgcaaatccggaagcatgggtatttcggtgacttaggttttatcatatt 31984321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 8212038 - 8211843
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||||||||||||||||  ||| |||||||| ||||   ||||| | | |||||| |  || ||||| ||| |||  |||||    
T  8212038 gtgatttcgtcgtctaaatgcggcgttgtgttgttcatcgtcttgtgcggcgtt---tgattccacgtcttgtcg--cgatgttcatttagttactattg 8211944  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||| |||  ||| |||||| ||||||| ||| |||||| |||||||||||  ||| ||||| ||||  |||| |||| ||||||||||    
T  8211943 aaagatctacatcagtcaaatacaaattcaaccaatgatctgg-cgtcaatgttgcagatccggaagcatgggtatttcaatgacttaggttttatcata 8211845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 15431688 - 15431639
Alignment:
Q  394 tcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    |||| |||| ||| |||||||||||||||||| |||||||||||||||||    
T  15431688 tcagccaattacaaattcaatcaatgatttgggcgtcaacgttgcagatc 15431639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 7342813 - 7342849
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  7342813 attcaatcaaagatttggacgtcaacgttgcagatcc 7342849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 9172581 - 9172617
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  9172581 attcaatcaaagatttggacgtcaacgttgcagatcc 9172617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 9180563 - 9180599
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  9180563 attcaatcaaagatttggacgtcaacgttgcagatcc 9180599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 568835 - 568757
Alignment:
Q  360 cggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgca 439  Q
    |||||||||||| || | | ||||||||||||||| || |||||||| |||||||||||||||   || |||||||||||    
T  568835 cggtgttcgtttagtacatgttgaaagatcaactt-agtcaatcacaaattcaatcaatgattcaaacttcaacgttgca 568757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 385
Target Start/End: Original strand, 940345 - 940424
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaa 385  Q
    ||||| |||||||||||||||| ||||||||||   |||||||||||| ||||||   |||||||||||||  ||| ||||||||    
T  940345 tgcggtgttgtgttgtttgtcgtcttgtgcgac---gtttgatttcgcgtcttgt--cgcggtgttcgtttaattcctattgaaa 940424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 484
Target Start/End: Original strand, 31317821 - 31317896
Alignment:
Q  409 ttcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||||||||| |||||||||| |||| ||  ||| ||||  |||| | ||||||||| |||||||||||    
T  31317821 ttcaatcaatgatttgggcgtcaacgttacagacccggaagcatggatatttcggtgatttagaatttatcatatt 31317896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 443
Target Start/End: Complemental strand, 51868635 - 51868600
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    |||||||||| |||||||||||||||||||||||||    
T  51868635 attcaatcaaagatttggacgtcaacgttgcagatc 51868600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 484
Target Start/End: Original strand, 9341716 - 9341886
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagatt 410  Q
    ||||||| |||| |||||||  ||||||||||||  |  ||||||||  ||||||| ||||  ||| |||| ||  ||||| ||||  |||||||| |||    
T  9341716 tgttgttcgtcgtcttgtgcagcgttgtttgattctgtgtcttgttg--cggtgtttgtttgattcatattaaactatcaa-ttcaatcaatcacatatt 9341812  T
Q  411 caatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    | ||||||| |||||||||||||| ||||||| ||  || |||   ||| || ||| |||||||||||||||||    
T  9341813 ccatcaatgttttggacgtcaacgatgcagattcaggagcatgtatattctggtgacttagattttatcatatt 9341886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 484
Target Start/End: Original strand, 15492373 - 15492447
Alignment:
Q  410 tcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||| |||||  |||||||||||   || ||||  ||| || |||||||||||||||||||||    
T  15492373 tcaatcaatgatttgggcgtcagtgttgcagatcctggagcatggatattatggtgatttagattttatcatatt 15492447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 444
Target Start/End: Complemental strand, 49504633 - 49504567
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||||| || |||  |||| ||| | |||| |||||||||||| |||||||||||||||||    
T  49504633 tattgaaagatctacatcaatcaattacaaactcaaacaatgatttggatgtcaacgttgcagatcc 49504567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 445
Target Start/End: Complemental strand, 25406274 - 25406237
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  25406274 attcaatcaaagatttcgacgtcaacgttgcagatcca 25406237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Complemental strand, 37720310 - 37720281
Alignment:
Q  223 ctttctttcaatctaaataagtgatttcca 252  Q
    ||||||||||||||||||||||||||||||    
T  37720310 ctttctttcaatctaaataagtgatttcca 37720281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 389
Target Start/End: Complemental strand, 39927627 - 39927549
Alignment:
Q  309 tgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatc 389  Q
    ||||||||| |||| |||||| | |||||||||||||| | ||||||  |||||||||| |||  ||| ||||||||||||    
T  39927627 tgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgt--tgcggtgttcatttgtttcatattgaaagatc 39927549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 5324548 - 5324512
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  5324548 attcaatcaaagatttgggcgtcaacgttgcagatcc 5324512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 13145001 - 13144965
Alignment:
Q  223 ctttctttcaatctaaataagtgatttccatatatat 259  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  13145001 ctttctttcaatctaaataagtggttttcatatatat 13144965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 14545608 - 14545644
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  14545608 attcaatcaaagatttgggcgtcaacgttgcagatcc 14545644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 358 - 442
Target Start/End: Complemental strand, 30506230 - 30506146
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagat 442  Q
    ||||||||||||||  ||| ||||||||||||  ||| |  ||||  ||||||||||||||||| | |||| ||| |||||||||    
T  30506230 tgcggtgttcgtttgcttcctattgaaagatcggcttgaatcaattgcagattcaatcaatgatgtagacgccaatgttgcagat 30506146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 40881003 - 40880967
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  40881003 attcaatcaaagatttgggcgtcaacgttgcagatcc 40880967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 45805818 - 45805782
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| |||||| |||||||||||||||||||    
T  45805818 attcaatcaaagatttgaacgtcaacgttgcagatcc 45805782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 48365755 - 48365719
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| |||||| |||||||||||||||||||    
T  48365755 attcaatcaaagatttgaacgtcaacgttgcagatcc 48365719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 50166089 - 50166053
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  50166089 attcaatcaaagatttggacgtcaacgttgtagatcc 50166053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 50272130 - 50272094
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  50272130 attcaatcaaagatttgggcgtcaacgttgcagatcc 50272094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 5e-51; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 51923679 - 51923883
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatc--ttgttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   || | |||||||||||| |||  |||||||| |||| |||||||| |||||  |||||||||||||||||||| |||| ||    
T  51923679 cgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatcttgtgcggcgttatttgattttgcatcatttgttgtgcggtgttcgtttggttcgta 51923778  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||| ||||| ||| || |||||||||||| |||    
T  51923779 ttgaaagatcagcttcagacaatcgcaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatc 51923878  T
Q  480 atatt 484  Q
    |||||    
T  51923879 atatt 51923883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 7546566 - 7546771
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgca-tc--ttgttgtgcggtgttcgtttcgttctt 378  Q
    ||||||||||||||||   |||| |||||||||||| |||| |||||||| ||||||||||||||||| ||  |||||||||||||||||||| |||| |    
T  7546566 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcaatcctttgttgtgcggtgttcgtttggttcgt 7546665  T
Q  379 attgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttat 478  Q
    ||||||||||||  |||||||||||||| ||||| |||||||||||  |||||||||||| |||||||||| ||||| ||| || |||||||||||| ||    
T  7546666 attgaaagatcagtttcagacaatcacaaattcagtcaatgatttgagcgtcaacgttgccgatccaaaagcatgggtattctggtgatttagatttcat 7546765  T
Q  479 catatt 484  Q
    ||||||    
T  7546766 catatt 7546771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 51303760 - 51303575
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttattgaaagatcaacttcaga 398  Q
    |||| ||||||||||||||||| ||| || |  ||||||||||||||||||||  |||||||||||||||||| |||  ||||||||||||| |||| ||    
T  51303760 tgcgacgttgtgttgtttgtcgtcttatgaggtgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggtttgtattgaaagatcagcttctga 51303661  T
Q  399 caatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| ||| ||||| ||| || |||||||||||| ||||||||    
T  51303660 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatatt 51303575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 42460705 - 42460905
Alignment:
Q  284 cgtgatttcgtcgtctctgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttatt 381  Q
    ||||||||||||||||  | | ||||||||||||  ||| |||||||| |||||||||||||| ||||||  |||||||||||||||||| |||| ||||    
T  42460705 cgtgatttcgtcgtcttagtg-cgttgtgttgttcatcgtcttgtgcggcgttgtttgatttcacatcttttgttgtgcggtgttcgtttggttcgtatt 42460803  T
Q  382 gaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
     ||| |||||||||||||| ||||| |||||||||||||||||| |||||||||||||||| || ||| |||  |||| || ||||||||||||||||||    
T  42460804 caaatatcaacttcagaca-tcacaaattcaatcaatgatttgggcgtcaacgttgcagatacagaagcatgaacattctggtgatttagattttatcat 42460902  T
Q  482 att 484  Q
    |||    
T  42460903 att 42460905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 8914664 - 8914868
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgt--tgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| | |||||||||| |||| |||||||| || |||||||||| | ||||| |  ||||| |||||||||| |||| ||    
T  8914664 cgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgta 8914763  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||| | ||| || |||||||||||| |||    
T  8914764 ttgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattctggtgatttagatttcatc 8914863  T
Q  480 atatt 484  Q
    |||||    
T  8914864 atatt 8914868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 301 - 445
Target Start/End: Complemental strand, 12947387 - 12947245
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||||  |||||||||| |||| |||||||| ||||||||||| ||    
T  12947387 tgcggctttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtg--gtgttcgtttggttcatattgaaatatcaacttcagtca 12947290  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    |||| |||||||||| |||||||||||| |||| |||||||||||    
T  12947289 atcatagattcaatcgatgatttggacgccaacattgcagatcca 12947245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 21289949 - 21289746
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttat 380  Q
    |||||||||||||||   |||| ||||||| |||| || | |||||||| ||||||||||||| |||||||  |||||||||||||||||| |||| |||    
T  21289949 gtgatttcgtcgtcttagtgcgacgttgtggtgttcgttgtcttgtgcggcgttgtttgattttgcatcttttgttgtgcggtgttcgtttggttcgtat 21289850  T
Q  381 tgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatca 480  Q
    |||||||||| ||||||||||||||| |||||||||||||||| |  |||||||||||||||| | ||| ||||  ||| || | |||||||||| ||||    
T  21289849 tgaaagatcagcttcagacaatcacaaattcaatcaatgattttggtgtcaacgttgcagatctagaagcatggatattctggtaatttagatttcatca 21289750  T
Q  481 tatt 484  Q
    ||||    
T  21289749 tatt 21289746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 29922013 - 29922213
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttatt 381  Q
    ||||||||||||||||   || |||||||||||||||  || |||||| ||||| |||||||||||| ||||||||  ||||||   |||||||| ||||    
T  29922013 cgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttg--cggtgtatatttcgttcatatt 29922110  T
Q  382 gaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    |||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||| ||  |||    || || ||||||||||||||||||    
T  29922111 gaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagattttatcat 29922210  T
Q  482 att 484  Q
    |||    
T  29922211 att 29922213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 29971166 - 29971366
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttatt 381  Q
    ||||||||||||||||   || |||||||||||||||  || |||||| ||||| |||||||||||| ||||||||  ||||||   |||||||| ||||    
T  29971166 cgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttg--cggtgtatatttcgttcatatt 29971263  T
Q  382 gaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    |||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||| ||  |||    || || ||||||||||||||||||    
T  29971264 gaaagatcaacttcaaccaatcacatattcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagattttatcat 29971363  T
Q  482 att 484  Q
    |||    
T  29971364 att 29971366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 53807988 - 53807790
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||| | |||||||||| |||| ||| |||| | ||||||||||| |||||||||||  | |||||||||  |||| |||||    
T  53807988 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttctgcggcattgtttgatttggcatcttgttg--ctgtgttcgttg-gttcatattg 53807892  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| | | | ||| || ||||||||||| |||||||    
T  53807891 aaagatcaacttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcatatccagaagcaagagtattctggtgatttagattatatcata 53807792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 16235397 - 16235582
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttattgaaagatcaacttcaga 398  Q
    |||| |||||||||||| | || |||||||| |||||||||||||||||| ||  |||||| |||| |||||| |||| ||||||||||| |  || |||    
T  16235397 tgcgacgttgtgttgttcgccgtcttgtgcggcgttgtttgatttcgcattttttgttgtgtggtgctcgtttggttcgtattgaaagattagttttaga 16235496  T
Q  399 caatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| | ||| ||||| ||| || |||||||||||| ||||||||    
T  16235497 caatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatgggtattctggtgatttagatttcatcatatt 16235582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 27706362 - 27706158
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   || | |||||||||||| |||| |||||||| |||||||| ||||||||||||  |||||||||||||||||| |||| ||    
T  27706362 cgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgtcttgtgcggcgttgtttaatttcgcatcttttgttgtgcggtgttcgtttggttcgta 27706263  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||| |||   ||||||||| |||||||||||||||| | ||||||||||||| ||||| ||| ||||| ||  || | |||||||||| |||    
T  27706262 ttgaaagatcagcttttaacaatcacaaattcaatcaatgatttcggcgtcaacgttgcatatccacaagcatgggtatcctggttatttagatttcatc 27706163  T
Q  480 atatt 484  Q
    |||||    
T  27706162 atatt 27706158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 53508181 - 53508382
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgca-tcttgttgtgcggtgttcgtttcgttcttat 380  Q
    ||||||||||||||||   ||||||||||||||||| |||| ||||| ||| ||||||||||||| |  | ||||||  | |||||||||| |||| |||    
T  53508181 cgtgatttcgtcgtctgaatgcggcgttgtgttgttcgtcgtcttgtacgatgttgtttgatttccccgttttgttg--cagtgttcgtttggttcctat 53508278  T
Q  381 tgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatca 480  Q
    ||||||||||| | |||  |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| | |||   ||||||||||||||||||    
T  53508279 tgaaagatcaaatccagttaatcacagattcaatcaatgatttggacgtcaactttgcacatccaaaagcatgagtattacaatgatttagattttatca 53508378  T
Q  481 tatt 484  Q
    ||||    
T  53508379 tatt 53508382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 324 - 435
Target Start/End: Complemental strand, 7887535 - 7887424
Alignment:
Q  324 cttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgattt 423  Q
    |||||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| || ||||||||    
T  7887535 cttgtgcgccgctgtttgatttcgcatcttgttgtgcggtgttcgtttagttcctattgaaagatcaacttcagacaatcacatattcgattaatgattt 7887436  T
Q  424 ggacgtcaacgt 435  Q
    || |||||||||    
T  7887435 gggcgtcaacgt 7887424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 301 - 444
Target Start/End: Original strand, 29239318 - 29239459
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||| || ||||||||||| | ||||||||||  |||||||||| |||| ||||| ||||||| |||||| ||    
T  29239318 tgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtg--gtgttcgtttggttcgtattggaagatcagcttcagtca 29239415  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||    
T  29239416 atcacagatttaatcaatgatttggacgtcgacgttgtagatcc 29239459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 342 - 484
Target Start/End: Original strand, 14859506 - 14859646
Alignment:
Q  342 atttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcaga 441  Q
    |||| |||||||||||  |||||||| ||| |||| ||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  14859506 attttgcatcttgttg--cggtgttcatttggttcatattgaaagatcagcttcaatcaatcacatattcaatcaatgatttggacgtcaacgttgcaga 14859603  T
Q  442 tccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||| ||| ||||| |||||| | |||||||||||||| ||||    
T  14859604 tccagaagcatgggtattttggtaatttagattttatcgtatt 14859646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 484
Target Start/End: Original strand, 35175386 - 35175560
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacag 407  Q
    ||||||||||  ||| |||||||  ||||||||||||||   ||||||||  |||||||||||| |||  ||||||||||||| |||||| ||||||||     
T  35175386 ttgtgttgttcatcgtcttgtgcagcgttgtttgatttcatgtcttgttg--cggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacat 35175483  T
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||||| |||||||||||||||| |||  ||| | ||| |||||||||| |||| ||||||||    
T  35175484 attcaatcaatgatttggacatcaacgttgcagatccgaaaacatgagtattctgatgatttatatttcatcatatt 35175560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 333 - 484
Target Start/End: Complemental strand, 629003 - 628855
Alignment:
Q  333 cgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaa 432  Q
    ||||||||||||| | |||||||||  |||||||||||  |||| ||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  629003 cgttgtttgatttggaatcttgttg--cggtgttcgttg-gttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacatcaa 628907  T
Q  433 cgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||| ||||||| ||| | | | ||| || ||||||||||| |||||||||    
T  628906 cgttgtagatccagaagcaagagtattctggtgatttagattatatcatatt 628855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 342 - 484
Target Start/End: Complemental strand, 52116092 - 52115953
Alignment:
Q  342 atttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcaga 441  Q
    ||||||||||||||||||| ||||||||||  |||||   ||||||||||||||| ||||||||| ||||||||||||||||   ||||||| |||||||    
T  52116092 atttcgcatcttgttgtgcagtgttcgtttgattctt---gaaagatcaacttcaaacaatcacatattcaatcaatgatttaagcgtcaacattgcaga 52115996  T
Q  442 tccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||  ||||| ||| | |||||||||||| |||||||||    
T  52115995 tccaaaatcatgggtattctaatgatttagattgtatcatatt 52115953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 306 - 425
Target Start/End: Original strand, 51487086 - 51487207
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatc 403  Q
    |||||||||||| |||| |||||||| ||||||||||||||| |||||  |||||| ||||||  ||| |||| |||||||||||||||||| |||||||    
T  51487086 cgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgtatcttttgttgtgtggtgtttttttggttcatattgaaagatcaacttcggacaatc 51487185  T
Q  404 acagattcaatcaatgatttgg 425  Q
    ||||||||||| ||||||||||    
T  51487186 acagattcaattaatgatttgg 51487207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 337 - 484
Target Start/End: Original strand, 48199788 - 48199933
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    ||||||||||| |||||||||||  |||||||||| |||| |||||||||||||||||||  |||| | | ||| ||||||||||||||||||| |||||    
T  48199788 gtttgatttcgtatcttgttgtg--gtgttcgtttggttcctattgaaagatcaacttcaatcaattataaatttaatcaatgatttggacgtcgacgtt 48199885  T
Q  437 gcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||| ||||| ||| ||| |||||| | ||| ||||| |||||||||||    
T  48199886 gcaaatccagaagcatgtgcatttcggtgacttagaatttatcatatt 48199933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 357 - 484
Target Start/End: Complemental strand, 50194394 - 50194267
Alignment:
Q  357 gtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggc 456  Q
    |||||||||||||||  ||| |||||||||| || |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||  ||| ||| |     
T  50194394 gtgcggtgttcgtttgtttcatattgaaagaccagcttcagtcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaagcatgagt 50194295  T
Q  457 attttgatgatttagattttatcatatt 484  Q
    ||| || |||||||||| | ||||||||    
T  50194294 attctggtgatttagatatcatcatatt 50194267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 448
Target Start/End: Complemental strand, 4396447 - 4396302
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| |||||||||||||||| |||||| | ||||||||||||| ||  |||||||  ||||||||||||  ||| ||||||||||| | |||||| ||    
T  4396447 tgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttg--cggtgttcgtttgattcatattgaaagataagcttcagtca 4396350  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaa 448  Q
    |||| |||||||||| || |||| ||| |||| |||||||||| ||||    
T  4396349 atcatagattcaatcgataattttgacatcaatgttgcagatcaaaaa 4396302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 40487285 - 40487481
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||  |||||||||| |||||| |  ||||||| |||  |||| |||||    
T  40487285 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt--ttgatttcgcgtcttgtcg--cggtgtttgttcagttcctattg 40487380  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||| |||| ||| |||||  ||||||||||||||||||| ||||||||||  ||| || || |||| | ||| |||| ||||||||||    
T  40487381 aaagatctacatcagtcaat-acaaattcagccaatgatttggacgtcaacattgcagatccggaagcataggtatttcggtgacttaggttttatcata 40487479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 484
Target Start/End: Original strand, 44805029 - 44805185
Alignment:
Q  325 ttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttg 424  Q
    ||||||| |||||||| ||||| | ||||||||  |||||||||||| || | |||||||| |||| | |||| |||||||| || |||||||| |||||    
T  44805029 ttgtgcggcgttgtttaatttcacgtcttgttg--cggtgttcgtttggtgcatattgaaatatcatcctcagtcaatcacatatgcaatcaataatttg 44805126  T
Q  425 gacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||| ||||||||||| |||| | || ||||| ||| || |||||||||||||||||||||    
T  44805127 gac-tcaacgttgcaaatccgagagcatgggtattatggtgatttagattttatcatatt 44805185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 425
Target Start/End: Original strand, 32246432 - 32246544
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagatt 410  Q
    ||||||||||||  |||||||||||||||||||| ||| |||||||| ||  |||||  || |||| ||||||||||||||||||||  ||||||| |||    
T  32246432 tgttgtttgtcgttttgtgcgacgttgtttgattccgcgtcttgttgcgc--tgttcacttggttcctattgaaagatcaacttcagttaatcacatatt 32246529  T
Q  411 caatcaatgatttgg 425  Q
    |||||||||||||||    
T  32246530 caatcaatgatttgg 32246544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 324 - 484
Target Start/End: Complemental strand, 26739447 - 26739289
Alignment:
Q  324 cttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgattt 423  Q
    |||||||| ||| ||||||||| |||||||||||||  || |  |||| |||| ||||||||||| ||||||   |||||| |||||||| |||||||||    
T  26739447 cttgtgcggcgtcgtttgattttgcatcttgttgtgatgtct--gtttggttcctattgaaagattaacttcgatcaatcatagattcaaccaatgattt 26739350  T
Q  424 ggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
     ||||||| ||||||||||| | ||   |||| ||| |||| |||||||||||||||||||    
T  26739349 tgacgtcagcgttgcagatcaagaatcgtgggtattatgataatttagattttatcatatt 26739289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 36461559 - 36461363
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||| |||||| |  ||||||| |||  |||| |||||    
T  36461559 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcg--cggtgtttgttctgttcctattg 36461465  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||  |||| ||| |||||| |||||||||||||||||||||| ||||||   ||| ||| | |||| |  ||||||| ||||||||||    
T  36461464 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttacagatctggaagcatgagtatttcggcgatttaggttttatcata 36461365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 364 - 484
Target Start/End: Original strand, 19339212 - 19339331
Alignment:
Q  364 gttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttga 463  Q
    |||||||| |||| ||||||||||||||||| || |||| ||| |||||||||||||||| |  ||||| |||||||||||| ||| ||||| |||| |     
T  19339212 gttcgtttagttcctattgaaagatcaactttagtcaattacaaattcaatcaatgatttaggtgtcaatgttgcagatccagaagcatgggtatttcg- 19339310  T
Q  464 tgatttagattttatcatatt 484  Q
    ||| |||||||||||||||||    
T  19339311 tgacttagattttatcatatt 19339331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 448
Target Start/End: Original strand, 41818194 - 41818335
Alignment:
Q  308 ttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatca--- 404  Q
    |||||||||| |||| ||||||||   |||||||||||||| ||||||||||   ||||||||| |||| |||||||||||||||||||  ||||||       
T  41818194 ttgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttgtga--tgttcgttt-gttcctattgaaagatcaacttcaatcaatcattt 41818290  T
Q  405 -cagattcaatcaatgatttggacgtcaacgttgcagatccaaaa 448  Q
     || ||||||||||||||||| | ||||| |||||||||||||||    
T  41818291 acaaattcaatcaatgatttgaatgtcaatgttgcagatccaaaa 41818335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 484
Target Start/End: Original strand, 9998427 - 9998623
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| |||| |||| | |||    
T  9998427 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcg--cggtgtttgtttagttcctcttg 9998521  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||| |||| ||| |||||| |||||||||| |||   |||||||||||||| ||| ||||| |||| | ||| |||  ||||||||||    
T  9998522 aaagatctacatcagtcaattacaaattcaaccaatgatttgcacgatgacgttgcagatccagaagcatgggtatttcggtgacttaagttttatcata 9998621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 23800038 - 23799842
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||||||||||||| || |||| |||||||| ||||   ||||||||| |||||| |  | ||||||| || |||| | |||    
T  23800038 gtgatttcgtcgtctaattgcggcgttgtgttcttagtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcg--cagtgttcgcttagttcctgttg 23799944  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||| | ||  ||| |||| ||| |||||||||||||||| | |||||||||||||||||| |||  ||| | ||||  |||| |||||||||||||||    
T  23799943 aaagaacgacaccagtcaattacaaattcaatcaatgatttcggcgtcaacgttgcagatccgaaaacatgagtatttcaatgacttagattttatcata 23799844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 301 - 436
Target Start/End: Original strand, 4821783 - 4821915
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| ||||| ||||| |||| |||||  ||| ||||||||||| || ||||||||  |||||||||||| |||| ||||||||||||| ||| || ||    
T  4821783 tgcggtgttgtattgttcgtcgtcttgtt-gacattgtttgattttgcgtcttgttg--cggtgttcgtttggttcatattgaaagatcagcttgagtca 4821879  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||| |||||||| |||||||||||  |||||||    
T  4821880 atcacatattcaatccatgatttggacaccaacgtt 4821915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 325 - 444
Target Start/End: Complemental strand, 26716196 - 26716079
Alignment:
Q  325 ttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttg 424  Q
    |||||||| ||||||| |||| | |||||||||  ||||||||||||  ||  ||||||||||| | |||||| |||||| | ||||||||||||||||     
T  26716196 ttgtgcgatgttgtttaattttgtatcttgttg--cggtgttcgtttgatttctattgaaagattagcttcagtcaatcataaattcaatcaatgatttt 26716099  T
Q  425 gacgtcaacgttgcagatcc 444  Q
    | ||||||||||||||||||    
T  26716098 ggcgtcaacgttgcagatcc 26716079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 285 - 443
Target Start/End: Complemental strand, 35865060 - 35864905
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||| | ||||   |||||| || |||| | |  |||||||||||| |||| |||||    
T  35865060 gtgatttcgtcgtctaattgcggcgttgtgttgttagtcgtcttgtgtggcgtt---tgattttgcgtcttttcg--cggtgttcgtttagttcctattg 35864966  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatc 443  Q
    ||||||| || |||  |||| ||| |||||||||||||||||||||| ||| |||||||||    
T  35864965 aaagatcgacatcaatcaattacaaattcaatcaatgatttggacgttaacattgcagatc 35864905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 21533919 - 21533741
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| ||||| || ||||   || |||||| |||||| |  ||||||| |||| |||| |||||||||||| || |||| |     
T  21533919 tgcggcgttgtgttgttcgtcgtcttgtacggcgtt---tggtttcgcgtcttgtcg--cggtgtttgtttagttcctattgaaagatctacatcagtcg 21533825  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |  ||| |||||| |||| |||||| ||||||||||||||||||  ||| ||||| |||| | ||| |||| ||||||||||||    
T  21533824 actacaaattcaaccaataatttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatatt 21533741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 484
Target Start/End: Original strand, 33579862 - 33580036
Alignment:
Q  305 gcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatca 404  Q
    ||||||||||||| |||| |||||||  ||||   |||||| || |||||| |  ||||||||||||  ||| |||||||||||| || |||| |||| |    
T  33579862 gcgttgtgttgttcgtcgtcttgtgcatcgtt---tgattttgcgtcttgtcg--cggtgttcgtttatttcatattgaaagatcgacatcagtcaatta 33579956  T
Q  405 cagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || |||||| ||||||||||| ||||||||||| ||||||  ||| | | | |||| | |||||||| ||||||||||||    
T  33579957 caaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcacgtgaatttcggtgatttaggttttatcatatt 33580036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 484
Target Start/End: Complemental strand, 12149861 - 12149716
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| |||||| |  || ||||||||| |||| |||||||||||| || |||| |  | ||| |||||| ||||||||||| ||||||||||    
T  12149861 gtttgatttcgcgtcttgtcg--cgatgttcgtttagttcctattgaaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgtt 12149764  T
Q  437 gcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||   ||||||||| |||| | ||| |||  ||||||||||||    
T  12149763 gcagatctggaagaatgggtatttcggtgaattatgttttatcatatt 12149716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 441
Target Start/End: Complemental strand, 25461114 - 25460974
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||| ||||||| |||| ||| |||||||||||||||||| |  ||||||  ||| ||||||||||  |||  ||||||||||||| || || ||    
T  25461114 tgcggcgttatgttgttcgtcgtcttatgcgacgttgtttgattttgtgtcttgtgttgctgtgttcgtttgtttcacattgaaagatcaaatttagcca 25461015  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcaga 441  Q
    || ||| ||||||||| |||||||  ||| |||| ||||||    
T  25461014 ataacaaattcaatcattgatttgagcgtaaacgctgcaga 25460974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 301 - 449
Target Start/End: Original strand, 10229454 - 10229597
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||  |||||||| ||||   ||||||||| | |||| |  ||||||| |||  |||| | |||||||||| || |||| ||    
T  10229454 tgcggcgttgtgttgttcgtcatcttgtgcggcgtt---tgatttcgcgttttgtcg--cggtgtttgttcagttcctcttgaaagatctacatcagtca 10229548  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaag 449  Q
    || ||| |||||| ||||||||||||||  |||||||||||||||||||    
T  10229549 attacaaattcaaccaatgatttggacgataacgttgcagatccaaaag 10229597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 445
Target Start/End: Original strand, 10233030 - 10233187
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| |||  |||| | |||    
T  10233030 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcg--cggtgtttgttcagttcctcttg 10233124  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    ||||||| || |||| |||| ||| |||||| ||||||||| ||||  |||||||||||||||    
T  10233125 aaagatctacatcagtcaattacaaattcaaccaatgatttagacgataacgttgcagatcca 10233187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 484
Target Start/End: Original strand, 21431663 - 21431769
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    |||||||||||| || |||| |||| ||| |||||| ||| ||||||||||||||||||||||||||  ||| ||||| |||| | ||| |||  |||||    
T  21431663 tattgaaagatctacatcagtcaattacaaattcaaccaacgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtttta 21431762  T
Q  478 tcatatt 484  Q
    |||||||    
T  21431763 tcatatt 21431769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 444
Target Start/End: Complemental strand, 6954824 - 6954668
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||| ||||| |||| |||||||| ||||   ||||||||| | ||||    ||||||| |||  |||| |||||    
T  6954824 gtgatttcgtcgtctaagtgcggcgttgtattgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtca--cggtgtttgttcagttcctattg 6954730  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| ||| |||||| |||||||||||||||||| | |||||||||    
T  6954729 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaatgctgcagatcc 6954668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 20609027 - 20608831
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| | ||   |||||| || |||||| |  ||||||| |||| |||| |||||    
T  20609027 gtgatttcgtcgtctaattgcggcgttgtgttgttagtcgtcttgtgcggcatt---tgattttgcgtcttgtcg--cggtgtttgtttagttcctattg 20608933  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||| |||||| | || || | |||  ||||||||||||||||  | |||| |||||||||||  ||| ||| | |||| | ||||||||||||||| |||    
T  20608932 aaatatcaacattagtcatttacaagttcaatcaatgatttgagcatcaaagttgcagatccggaagcatgagaatttcggtgatttagattttattata 20608833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 484
Target Start/End: Original strand, 38545782 - 38545955
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcac 405  Q
    |||||||||||| |||| |||||||| ||||   ||||||||| |||||| |  ||||||| ||||  ||   ||||||||||| || |||| |||| ||    
T  38545782 cgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcg--cggtgtttgtttattttccattgaaagatcgacatcagtcaattac 38545876  T
Q  406 agattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    | |||||| ||||||||||| ||||||||||| |||||| |||  ||| | |||| | ||| |||| ||||||||||||    
T  38545877 aaattcaaccaatgatttgggcgtcaacgttgaagatccgaaaacatgcgaatttaggtgacttaggttttatcatatt 38545955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 43488718 - 43488522
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   || |||||||||||||| |||| |||||||| ||||   ||||||||| ||||||||  ||||||| |||  |||  |||||    
T  43488718 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgttg--cggtgtttgttcagtttctattg 43488624  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||| |||  | | |  |||| | | |||||| |||||||||| |||||||||||||||||||  ||| ||| | |||| | |||||||| ||||||||||    
T  43488623 aaatatctgcattaatcaattataaattcaagcaatgatttgaacgtcaacgttgcagatccggaagcatgagtatttcggtgatttaggttttatcata 43488524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 45568573 - 45568377
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||| | ||||   ||||||||| ||||||    ||||||| |||  |||| | |||    
T  45568573 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgtca--cggtgtttgttcagttcctgttg 45568479  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||| | | || |||  |||| ||| |||||| ||||||||||||||||||| ||||||||||  ||| ||||  |||| | |||||||| ||||||||||    
T  45568478 aaataactacatcaatcaattacaaattcaaacaatgatttggacgtcaactttgcagatccggaagcatggatatttgggtgatttaggttttatcata 45568379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 46304577 - 46304452
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| |||| |||| |||||||| ||| || |||| |||| ||| |||||| ||||||||| | ||||||| ||||||||||  ||| ||||| ||    
T  46304577 gcggtgtttgtttagttcctattgaaatatctacatcagtcaattacaaattcaaccaatgatttaggcgtcaacattgcagatccggaagcatgggtat 46304478  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||| ||||||||||||    
T  46304477 ttcggtgacttaggttttatcatatt 46304452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 45424809 - 45424914
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| | ||||||  ||||||| |||| |||| |||||||| ||| || || | |||| ||| |||||||||||||||||| ||||||| ||    
T  45424809 gtttgatttcgcgtattgttg--cggtgtttgtttagttcctattgaaaaatcgacatcggtcaattacaaattcaatcaatgatttgggcgtcaacatt 45424906  T
Q  437 gcagatcc 444  Q
    ||||||||    
T  45424907 gcagatcc 45424914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 484
Target Start/End: Complemental strand, 48650810 - 48650666
Alignment:
Q  338 tttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttg 437  Q
    ||||||||||| |||||| |  ||||||| |||  |||| ||||||||||||  | |||  |||| ||| |||||| |||| ||||||||||||||||||    
T  48650810 tttgatttcgcgtcttgtcg--cggtgtttgttcagttcctattgaaagatctgcatcaatcaattacaaattcaaccaataatttggacgtcaacgttg 48650713  T
Q  438 cagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||  |||||||| | |||| | ||| |||  ||||||||||||    
T  48650712 cagatctgaaagaatgagtatttcggtgacttaagttttatcatatt 48650666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 484
Target Start/End: Complemental strand, 52923224 - 52923049
Alignment:
Q  304 ggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatc 403  Q
    |||| ||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| |||  |||| | |||||||||| |  | || ||||     
T  52923224 ggcgctgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcg--cggtgtttgttcagttcctcttgaaagatctatattagtcaatt 52923130  T
Q  404 acagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||| |||||| ||||||||||||||||||||||||||||||  ||| ||||| |||| | ||| |||  ||||||||||||    
T  52923129 acaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatatt 52923049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 285 - 445
Target Start/End: Original strand, 10108196 - 10108353
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| | |  |||| | |||    
T  10108196 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcg--cggtgtttgctcagttcctcttg 10108290  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    ||||||| || |||| |||| ||| |||||| |||||||||| |||  |||||||||||||||    
T  10108291 aaagatctacatcagtcaattacaaattcaaccaatgatttgaacgataacgttgcagatcca 10108353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 422
Target Start/End: Original strand, 1649377 - 1649513
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   || |||||||| |||||   || ||||||||  |||||| |||||||| ||||||||    |||||| ||| |||| |||||    
T  1649377 gtgatttcgtcgtctgagtgtggcgttgtattgttctccgtcttgtgcggtgttgtt-gatttcgcgtcttgttgat--gtgttcttttagttcctattg 1649473  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatt 422  Q
    ||||||| |||||||||||| ||||||| |||||||||||    
T  1649474 aaagatcgacttcagacaattacagatttaatcaatgatt 1649513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 437
Target Start/End: Original strand, 3606751 - 3606885
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||| |||||||||| |||| |||||| | |||||| |||| || | ||||||||||  |||||||||| ||   |||||||||||| ||||  ||||    
T  3606751 tgcggcattgtgttgttcgtcgtcttgtgtggcgttgtatgatatcccgtcttgttgtg--gtgttcgtttggtatctattgaaagatcgactttggaca 3606848  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttg 437  Q
    || ||| |||||| ||||||||| | | |||||||||    
T  3606849 attacatattcaaacaatgattttgtcatcaacgttg 3606885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 9797591 - 9797466
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| |||  |||| |||||||||||| || |||  |||| ||| |||||| |||||||||| |||| ||||||||||||||  ||| ||||| ||    
T  9797591 gcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgaacgttaacgttgcagatccggaagcatgggtat 9797492  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    ||   |||||||  ||||||||||||    
T  9797491 ttaagtgatttatgttttatcatatt 9797466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 18011052 - 18011137
Alignment:
Q  360 cggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    |||||||||||| |||  |||||||||||| |||| || |||| |||  |||||||||| | |||| |||||||||||||||||||    
T  18011052 cggtgttcgtttagtttctattgaaagatcgactttagtcaataacaatttcaatcaatcacttgggcgtcaacgttgcagatcca 18011137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 484
Target Start/End: Original strand, 21313067 - 21313192
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    ||||||||||||| |||  |||||||| |||    |||| |||| ||| |||||||||||||||||||||||||||| ||| |||  |||  ||| | ||    
T  21313067 gcggtgttcgtttagtttctattgaaatatcggtatcagtcaattacaaattcaatcaatgatttggacgtcaacgtagcatatctgaaatcatgagtat 21313166  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||||||||||||||||    
T  21313167 ttcggtgacttagattttatcatatt 21313192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 484
Target Start/End: Original strand, 40556733 - 40556858
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||| |||  |||| | |||||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||| | ||||  ||| ||| | ||    
T  40556733 gcggtgtttgttcagttcctcttgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgtaaatccggaagcatgtgtat 40556832  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    |||| ||| |||  ||||||||||||    
T  40556833 tttggtgacttaagttttatcatatt 40556858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 444
Target Start/End: Original strand, 32701502 - 32701607
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| | ||||||  || |||| |||  |||| |||||||||||| || |||  |||| ||| |||||||||||||||||| ||||||||||    
T  32701502 gtttgatttcgcgttttgttg--cgatgtttgttcagttcctattgaaagatctacatcaaccaattacaaattcaatcaatgatttgggcgtcaacgtt 32701599  T
Q  437 gcagatcc 444  Q
    | ||||||    
T  32701600 gtagatcc 32701607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 51202325 - 51202248
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatca 390  Q
    |||||||||||| |||||||| |||||||||||||| ||||  || ||||||||||| |||  ||| |||||||||||||    
T  51202325 tgttgtttgtcgtcttgtgcggcgttgtttgatttcccatc--gtcgtgcggtgttcatttgattcatattgaaagatca 51202248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 484
Target Start/End: Complemental strand, 3085304 - 3085233
Alignment:
Q  413 atcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||| ||||||||||||||||| | |||| | ||| ||| |||||||||||| || ||||||||    
T  3085304 atcaatgatttgaacgtcaacgttgcagattcgaaagtaggggtattctgatgatttagaattcatcatatt 3085233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 429
Target Start/End: Original strand, 27856194 - 27856265
Alignment:
Q  358 tgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgt 429  Q
    ||||||| |||||| |||| ||||||||||| ||||||||  ||| ||| |||||||||||||| |||||||    
T  27856194 tgcggtgctcgtttggttcctattgaaagattaacttcagtaaataacaaattcaatcaatgatctggacgt 27856265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 484
Target Start/End: Complemental strand, 20465008 - 20464902
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    |||||||||||| | ||||| |||| ||| ||||||| |||||||||| |||||| |||||||||   |||| ||| | |||| | ||| ||| ||||||    
T  20465008 tattgaaagatcgatttcagtcaattacaaattcaataaatgatttgggcgtcaatgttgcagatttgaaagcatgagtatttcggtgacttaaatttta 20464909  T
Q  478 tcatatt 484  Q
    |||||||    
T  20464908 tcatatt 20464902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 484
Target Start/End: Complemental strand, 47042154 - 47041980
Alignment:
Q  306 cgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgt-gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatca 404  Q
    |||||||||||| |||| |||||||| ||||   ||||||||| | ||  ||| ||||||||| |||  ||| ||||||||||||| | |||| || | |    
T  47042154 cgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtttt--tgtagcggtgttcatttatttcctattgaaagatcagcatcagtcagtta 47042060  T
Q  405 cagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || |||||| ||||| ||||| ||||||||||| ||||||  ||| ||| | |||||| ||| |||| ||| ||||||||    
T  47042059 caaattcaaccaatggtttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttcatcatatt 47041980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 7448947 - 7448886
Alignment:
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||||| ||||    
T  7448947 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatcc 7448886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 7457089 - 7457028
Alignment:
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| ||| |||||| ||||||||||||||||||||||||| ||||    
T  7457089 aaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcatatcc 7457028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 7887603 - 7887562
Alignment:
Q  218 tttctctttctttcaatctaaataagtgatttccatatatat 259  Q
    |||| ||||||||||||||||||||||||||||||| |||||    
T  7887603 tttccctttctttcaatctaaataagtgatttccatgtatat 7887562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 444
Target Start/End: Complemental strand, 12050757 - 12050620
Alignment:
Q  302 gcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaa 401  Q
    |||||||| ||||||| |||| |||||||| ||||   ||||||| | |||||| |  ||||||| |||| |||| ||||| || ||| || || | |||    
T  12050757 gcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttctcctcttgtcg--cggtgtttgtttagttcctattggaatatctacatcggtcaa 12050663  T
Q  402 tcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    | ||| |||||| |||||||||||  |||||||||||||||||    
T  12050662 ttacaaattcaaccaatgatttgggtgtcaacgttgcagatcc 12050620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 444
Target Start/End: Original strand, 43016886 - 43016971
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||| |||| |||| |  ||||||||| || | || |||| ||| |||||| ||||||||||| ||||||||||||||||||    
T  43016886 gcggtgtttgtttagttccttgtgaaagatcgacgttagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatcc 43016971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 408
Target Start/End: Original strand, 52496929 - 52497007
Alignment:
Q  328 tgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacaga 408  Q
    ||||||||||||||||||| | | |||||| |  ||||||||||  ||||||||||||||||| |||||  ||||||||||    
T  52496929 tgcgacgttgtttgatttcacgtattgttgag--gtgttcgtttgattcttattgaaagatcagcttcaatcaatcacaga 52497007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 3848909 - 3848873
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  3848909 attcaatcaaagatttggacgtcaacgttgcagatcc 3848873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 29921952 - 29921988
Alignment:
Q  223 ctttctttcaatctaaataagtgatttccatatatat 259  Q
    |||||||||||||||||||||||||||||| ||||||    
T  29921952 ctttctttcaatctaaataagtgatttccacatatat 29921988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 259
Target Start/End: Original strand, 29971105 - 29971141
Alignment:
Q  223 ctttctttcaatctaaataagtgatttccatatatat 259  Q
    |||||||||||||||||||||||||||||| ||||||    
T  29971105 ctttctttcaatctaaataagtgatttccacatatat 29971141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 22290950 - 22290998
Alignment:
Q  334 gttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaa 384  Q
    |||||||||||| |||||||||||  |||||||||||| ||||||||||||    
T  22290950 gttgtttgattttgcatcttgttg--cggtgttcgtttggttcttattgaa 22290998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 345
Target Start/End: Complemental strand, 24396594 - 24396551
Alignment:
Q  302 gcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgattt 345  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||    
T  24396594 gcggagttatgttgtttgtcgtcttgtgcgacgttgtttgattt 24396551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 389
Target Start/End: Original strand, 25162439 - 25162515
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatc 389  Q
    ||||||| |||| |||||||| |||||||||||||| |||||  | ||||||||||| |||  ||| ||||||||||||    
T  25162439 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccatct--tcgtgcggtgttcatttgtttcatattgaaagatc 25162515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 35499269 - 35499193
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatc 389  Q
    ||||||| |||| |||||||| |||||||||||||| | |||  ||||||||||||| |||  ||| ||||||||||||    
T  35499269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtct--ttgtgcggtgttcatttgattcatattgaaagatc 35499193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 12947471 - 12947434
Alignment:
Q  222 tctttctttcaatctaaataagtgatttccatatatat 259  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  12947471 tctttccttcaatctaaataagtgatttccacatatat 12947434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 22290835 - 22290876
Alignment:
Q  221 ctctttctttcaatctaaataagtgatttccatatatattaa 262  Q
    |||||||||| |||||||||||||||||| || |||||||||    
T  22290835 ctctttcttttaatctaaataagtgattttcacatatattaa 22290876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 444
Target Start/End: Original strand, 45425623 - 45425708
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||| |||| ||||  ||||||||||| |  |||  |||| ||| |||||||||||||||||| | ||||| ||||||||||    
T  45425623 gcggtgtttgtttagttcccattgaaagatcgaaatcaatcaattacaaattcaatcaatgatttgggcttcaacattgcagatcc 45425708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 259
Target Start/End: Complemental strand, 50194470 - 50194437
Alignment:
Q  226 tctttcaatctaaataagtgatttccatatatat 259  Q
    ||||||||||||||||||||||||||| ||||||    
T  50194470 tctttcaatctaaataagtgatttccacatatat 50194437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 54149078 - 54149147
Alignment:
Q  415 caatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||| ||||||||||||||||||  ||| ||||  |||| | ||| || ||||||||||||||    
T  54149078 caatgatttgggcgtcaacgttgcagatccggaagcatggctatttcggtgacttggattttatcatatt 54149147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 14464594 - 14464630
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  14464594 attcaatcaaagatttgggcgtcaacgttgcagatcc 14464630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 17237889 - 17237925
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  17237889 attcaatcaaagatttgggcgtcaacgttgcagatcc 17237925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 439
Target Start/End: Original strand, 20494421 - 20494453
Alignment:
Q  407 gattcaatcaatgatttggacgtcaacgttgca 439  Q
    |||||||||||| ||||||||||||||||||||    
T  20494421 gattcaatcaataatttggacgtcaacgttgca 20494453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 29503545 - 29503581
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  29503545 attcaatcaaagatttgggcgtcaacgttgcagatcc 29503581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 30648709 - 30648673
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  30648709 attcaatcaaagatttggacgtcaacgttgcaaatcc 30648673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 42460647 - 42460675
Alignment:
Q  224 tttctttcaatctaaataagtgatttcca 252  Q
    |||||||||||||||||||||||||||||    
T  42460647 tttctttcaatctaaataagtgatttcca 42460675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 1e-48; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 8102680 - 8102884
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||  ||||||||| || |||| |||||||| |||||||||||||||||||||  ||||||||||||| |||| |||| ||    
T  8102680 cgtgatttcgtcgtcttagtgcaacgttgtgtttttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgtttgtttggttcgta 8102779  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||| ||  |||   ||| |||||||||||||||||||    
T  8102780 ttgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaaacatgaatattctgatgatttagattttatc 8102879  T
Q  480 atatt 484  Q
    |||||    
T  8102880 atatt 8102884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 546003 - 546189
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttcttattgaaagatcaacttcaga 398  Q
    |||| ||||| |||||| |||| ||||||||||||||||||||||| ||| ||  |||||||||||||||||| |||| ||||||||||||| |||||||    
T  546003 tgcgacgttgcgttgttcgtcgtcttgtgcgacgttgtttgatttcacattttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcaga 546102  T
Q  399 caatcacaga-ttcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||| | ||||||||||||||||| ||||||||||||||||||| ||| ||||| ||| || || ||||||||| ||||||||    
T  546103 caatcacaaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtggtttagatttcatcatatt 546189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 1523362 - 1523566
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgt--tgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||||||||| |||| |||||||||| |||||||||||| ||| || |  |||||||||||||||| |||| ||    
T  1523362 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacattgtttgatttcacatattttattgtgcggtgttcgtttggttcgta 1523461  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    |||||| |||| ||| |||||||| ||  |||||||||||||||| |||||||||||||||||||| ||| ||||| ||| || ||||||||||||||||    
T  1523462 ttgaaatatcagcttgagacaatctcaacttcaatcaatgatttgaacgtcaacgttgcagatccagaagcatgggtattctggtgatttagattttatc 1523561  T
Q  480 atatt 484  Q
    |||||    
T  1523562 atatt 1523566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 14801781 - 14801985
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgt--tgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| | |||||||||| |||| |||||||| || |||||||||| | ||||| |  ||||| |||||||||| |||| ||    
T  14801781 cgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgta 14801880  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||| | |||||| |||||||||||| |||    
T  14801881 ttgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattttggtgatttagatttcatc 14801980  T
Q  480 atatt 484  Q
    |||||    
T  14801981 atatt 14801985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 301 - 481
Target Start/End: Original strand, 30493509 - 30493687
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| ||||||||||| |||| |||||||  ||||||||||||||| |||||||| ||  |||||||||| |||| |||||||||||||||||||| ||    
T  30493509 tgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctg--gtgttcgtttggttcatattgaaagatcaacttcagtca 30493606  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
    ||| || |||||||||||||||||||||||||||||||| ||||  ||| ||||| |||||| ||||||| ||||||||||    
T  30493607 atctcatattcaatcaatgatttggacgtcaacgttgcaaatccggaagcatgggtattttggtgatttatattttatcat 30493687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 26588585 - 26588404
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| ||||||||| |||||| |||||||| |||||||||||||| | ||||||||  |||||||||||| |||| |||||||||||||||||||| ||    
T  26588585 tgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttg--cggtgttcgtttggttcatattgaaagatcaacttcagtca 26588488  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||| ||||||| ||||||||||| |||||||||||| ||||| ||| ||| | |||| | |||||| ||||||||||||||    
T  26588487 atcacacattcaattaatgatttggatgtcaacgttgcaaatccagaagcatgagtatttgggtgattttgattttatcatatt 26588404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 303 - 484
Target Start/End: Original strand, 28981156 - 28981335
Alignment:
Q  303 cggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaat 402  Q
    ||||||||||||||| |||| ||| ||||  |||||||||||| | |||||||||||  |||||||||| |||| |||| |||||| |  || || ||||    
T  28981156 cggcgttgtgttgttcgtcgtcttctgcggtgttgtttgattttgtatcttgttgtg--gtgttcgtttggttcatattcaaagattagttttagtcaat 28981253  T
Q  403 cacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||||||||||| | ||||||||| |||||||||| |||| ||||| |||||| | |||||||||||||||||||    
T  28981254 cacagattcaatcaatgatcttgacgtcaacattgcagatccgaaagtatgggtattttggtcatttagattttatcatatt 28981335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 34185806 - 34185625
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||| ||||| ||||||||| |||||| ||||||||||||||| || ||||||||||  |||||| ||| |||| ||||||||||||||||||||       
T  34185806 tgcggcattgtgctgtttgtcgtcttgtgtgacgttgtttgattttgcgtcttgttgtg--gtgttcttttagttcatattgaaagatcaacttcaggtg 34185709  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||  |||||||||||||||||||||||||| ||||| | | | ||  ||||| ||| || |||||||||||||||||||||    
T  34185708 atcacgaattcaatcaatgatttggacgtcaactttgcaaaactagaatcatgggtattctggtgatttagattttatcatatt 34185625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 284 - 484
Target Start/End: Original strand, 30776626 - 30776821
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||||||||||| |||  |||||||| ||||||||||||| |||||||  ||||||||||||||||         |    
T  30776626 cgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcatcttgtgcggcgttgtttgattttgcatcttttgttgtgcggtgttcgt---------a 30776716  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||| ||| ||||||||| ||| | ||| ||||| ||| || ||||||||||||||||    
T  30776717 ttgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtgaacgttgcaaatctagaagcatgggtattctggtgatttagattttatc 30776816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 3913684 - 3913506
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| ||||||| |||||   ||||||||| |||||| |  ||||||| |||  |||| |||||||||||| || |||  ||    
T  3913684 tgcggcgttgtgttgttcgtcgtcttgtgcaacgtt---tgatttcgcgtcttgtcg--cggtgtttgttcagttcctattgaaagatctacatcaatca 3913590  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| ||||||||| ||||||||||||||||||||| ||| ||||| |||| | |||||||| ||||||||||||    
T  3913589 attacaaattcaagcaatgatttagacgtcaacgttgcagatccagaagcatgggtatttcggtgatttaggttttatcatatt 3913506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 304 - 444
Target Start/End: Complemental strand, 1933802 - 1933664
Alignment:
Q  304 ggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatc 403  Q
    |||||||||||| | |||| |||||||| | ||||||||||| |  ||| ||||  ||||||| |||| |||| |||  ||||||||||||||  |||||    
T  1933802 ggcgttgtgttgctagtcgtcttgtgcggcattgtttgattttgtgtctggttg--cggtgtttgtttggttcatatcaaaagatcaacttcaatcaatc 1933705  T
Q  404 acagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1933704 acagattcaatcaatgatttggacgtcaacgttgcagatcc 1933664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 301 - 482
Target Start/End: Complemental strand, 32191841 - 32191664
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| || | |||||| | ||||||||| ||||| || |||||   |||||||| ||| |||| | |||||| |  | |||||| ||    
T  32191841 tgcggcgttgtgttgttcgttgacttgtgtggcgttgtttggtttcgtatattgttt--cggtgttcatttggttcatcttgaaaaa--agcttcagtca 32191746  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||||| ||||||||||||||||||||| |||||||||| |||| |||| ||| ||||| || |||||||||||||||||||    
T  32191745 atcacatattcaatcaatgatttggacgccaacgttgcatatccgaaagcatgagcattctggtgatttagattttatcata 32191664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 528463 - 528282
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||| ||||||||| ||||||  |||||||| ||||||||||||| |  ||||||||  | ||||| ||||||||||||| ||||||||| ||||||  |    
T  528463 tgcgacgttgtgttatttgtcatcttgtgcggcgttgtttgattttgtgtcttgttg--cagtgtttgtttcgttcttatcgaaagatcagcttcagtaa 528366  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| ||| ||||||| |||||| |||||||||||||||| |  ||| ||  | ||| |  |||||||||||||||||||||    
T  528365 attacatatttaatcaattatttgggcgtcaacgttgcagattctgaagtataagtattctagtgatttagattttatcatatt 528282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 31296797 - 31296978
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    |||||||||||||||||  ||  |||||||| ||||||||||||| |||||||||||  | |||||| |||  ||| |||||||| ||||  ||||| ||    
T  31296797 tgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttg--cagtgttcatttgattcatattgaaaaatcagtttcagtca 31296894  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||  | |||||||  ||||||| ||||||||||||||||||||  ||| ||| | ||| || ||||||| |||||||||||||    
T  31296895 atccaatattcaattgatgatttagacgtcaacgttgcagatccggaagcatgagtattctggtgatttatattttatcatatt 31296978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 23128598 - 23128776
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||| | ||||   ||||||||| | |||| |  | ||||| |||  |||||||||||||||||||| |||| ||    
T  23128598 tgcggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgttttgtcg--cagtgtttgttcagttcttattgaaagatcaacatcagtca 23128692  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| ||||||||||||||||||| |||||||||| ||||||  ||| ||||| |||| | ||| |||  ||||||||||||    
T  23128693 attacaaattcaatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttcggtgacttaagttttatcatatt 23128776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 378 - 484
Target Start/End: Complemental strand, 31852231 - 31852125
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||| ||||||| |||||||||||  ||| ||| | ||| || ||||||| ||||||    
T  31852231 tattgaaagatcaacttcagtcaaccacagattaaatcaatgatttgaacgtcaaagttgcagatccggaagcatgagtattctggtgatttaaatttta 31852132  T
Q  478 tcatatt 484  Q
    |||||||    
T  31852131 tcatatt 31852125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 359 - 484
Target Start/End: Original strand, 127702 - 127827
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    ||||||||| ||| |||| |||||||||||| || |||| |||| ||| |||| ||||||||||||| |||||||||||||||| |  ||| ||| | ||    
T  127702 gcggtgttcatttagttcctattgaaagatcgacatcagtcaattacaaattcgatcaatgatttgggcgtcaacgttgcagattcggaagcatgagtat 127801  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | |||||||||||||||||||||    
T  127802 ttcggtgatttagattttatcatatt 127827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 29255503 - 29255378
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    ||||||||||||| |||| ||||||||||||  | |||| |||| ||| |||||||||||||||||| |||||||||| |||||||  ||  ||||| ||    
T  29255503 gcggtgttcgtttagttcctattgaaagatcttcatcagtcaattacaaattcaatcaatgatttgggcgtcaacgttacagatccggaaacatgggtat 29255404  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || | ||| |||||||||||||||||    
T  29255403 ttcggtgacttagattttatcatatt 29255378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 359 - 484
Target Start/End: Original strand, 30894633 - 30894757
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    ||||||||||||| |||| |||||||||||| || |||| |||| ||| |||||| ||||||||||| |||||||||| |||||||| ||| || || ||    
T  30894633 gcggtgttcgtttagttcatattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttacagatccagaagcat-ggtat 30894731  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || ||||| |||| ||||||||||||    
T  30894732 ttcgatgaattaggttttatcatatt 30894757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 444
Target Start/End: Original strand, 3355097 - 3355235
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| ||||||||||| |||  |||||| ||||||   ||||||||| ||||||||||  |||||||||| |||| ||||||||| || || |||| ||    
T  3355097 tgcggtgttgtgttgttcgtcctcttgtgtgacgtt---tgatttcgcgtcttgttgtg--gtgttcgtttagttcctattgaaaggtcgacatcagtca 3355191  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    || | | ||||||| |||||||||||||||||| ||||||||||    
T  3355192 attataaattcaatgaatgatttggacgtcaactttgcagatcc 3355235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 378 - 484
Target Start/End: Complemental strand, 27097680 - 27097574
Alignment:
Q  378 tattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagatttta 477  Q
    ||||||||||| |  || || |||||| |||||||||||||||||||||||||||| ||||| |||| |||  ||||  |||||| ||||||||||||||    
T  27097680 tattgaaagattagttttagtcaatcatagattcaatcaatgatttggacgtcaacattgcaaatccgaaaacatggatattttggtgatttagatttta 27097581  T
Q  478 tcatatt 484  Q
    |||||||    
T  27097580 tcatatt 27097574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 444
Target Start/End: Original strand, 606166 - 606322
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||  |||||||| ||||   ||||||||||| |||| |  ||||||| |||  |||| |||||    
T  606166 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcggcgtt---tgatttcgcattttgtcg--cggtgtttgttcagttcctattg 606260  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| | | |||||| ||||||||||||| ||||||||||||||||    
T  606261 aaagatctacatcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatcc 606322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 444
Target Start/End: Complemental strand, 33053296 - 33053140
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||||||||||| |||| |||||||| ||||   ||||||||| | |||| |  ||||||| |||  |||| | |||    
T  33053296 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcg--cggtgtttgttcagttcctcttg 33053202  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| || |||| |||| ||| |||||| |||||||||| |||||||||||||||||||    
T  33053201 aaagatctacatcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcagatcc 33053140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 337 - 484
Target Start/End: Original strand, 12170481 - 12170626
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| |||||| |  ||||||| |||  |||| |||||||||||| || |||  |||| ||| |||||| |||||||||||| |||||||||    
T  12170481 gtttgatttcgcgtcttgtcg--cggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgtt 12170578  T
Q  437 gcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||  ||| ||||| |||| | |||||||| ||| ||||||||    
T  12170579 gcagatccggaagcatgggtatttcggtgatttaggtttgatcatatt 12170626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 482
Target Start/End: Complemental strand, 7976309 - 7976121
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttatt 381  Q
    ||||||||||||||||   ||||  ||||||||||| |||| |||||||| |||| ||| |||  || ||||||||||  |||||||||| |||| ||||    
T  7976309 cgtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcgttttttaattatgcgtcttgttgtg--gtgttcgtttagttcatatt 7976212  T
Q  382 gaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcat 481  Q
     |||||||||          ||||||||||||| ||| |||||||||||||||||| ||||||  ||| ||||| ||| || ||||||| ||||||||||    
T  7976211 aaaagatcaa----------tcacagattcaattaattatttggacgtcaacgttgtagatccggaagcatgggtattctggtgatttaaattttatcat 7976122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 484
Target Start/End: Original strand, 9380031 - 9380181
Alignment:
Q  332 acgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtca 431  Q
    ||||| ||||||||| | ||||||||  || || | |||| || |||||||||||| ||| || || ||||||||  ||||||||||||||||   ||||    
T  9380031 acgttctttgatttcacgtcttgttg--cgatgattgtttggtacttattgaaagaccaattttagtcaatcacatgttcaatcaatgatttgtgtgtca 9380128  T
Q  432 acgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    | |||| |||| || ||| ||||| |||||| |||||||||||||||||||||    
T  9380129 atgttgtagattcagaagcatgggtattttggtgatttagattttatcatatt 9380181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 29319988 - 29319810
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||  ||| |||| ||||   ||||||||| |||||| |  ||||||| |||   ||| |||||||||||| || |||| ||    
T  29319988 tgcggcgttgtgttgttcgtcctcttatgcggcgtt---tgatttcgcgtcttgtcg--cggtgtttgttaacttcatattgaaagatctacatcagtca 29319894  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| |||||||||| |||||||||||||| ||||  ||| ||| | |||||| ||| |||  ||||||||||||    
T  29319893 attacaaattcaaccaatgatttgaacgtcaacgttgcaaatccggaagcatgtgtattttggtgacttaagttttatcatatt 29319810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 484
Target Start/End: Complemental strand, 32327327 - 32327149
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||||| ||||   ||||||||| |||||| |  |||||||  ||   ||  |||||||||||| || |||  ||    
T  32327327 tgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcg--cggtgtttattcaatttctattgaaagatctacatcaatca 32327233  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| ||||||||| ||||| ||||||||||||||  ||| ||| | | |||| |||||||| ||||||||||||    
T  32327232 attacaaattcaagcaatgattttgacgttaacgttgcagatccggaagcatgagtagtttggtgatttaggttttatcatatt 32327149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 444
Target Start/End: Original strand, 34018522 - 34018678
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   || |||||||||||||| |||| |||||| ||||||   |||||||   |||||| |  |||||||||||| |||| |||||    
T  34018522 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgagacgtt---tgatttcatgtcttgtcg--cggtgttcgtttagttcctattg 34018616  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    ||||||| |  ||||  ||| ||| ||||||  |||||||||| ||||||||||||||||||    
T  34018617 aaagatcgagatcagttaattacaaattcaactaatgatttgggcgtcaacgttgcagatcc 34018678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 444
Target Start/End: Complemental strand, 7515330 - 7515174
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||| ||||||| |||| |||| ||||||||   ||||||||| |||||| |  ||||||| |||| |||| |||||    
T  7515330 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgggcgacgtt---tgatttcgcgtcttgtcg--cggtgtttgtttagttcctattg 7515236  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
     || ||| || |||  |||| ||| |||||| ||||||||| | ||||||||||||| ||||    
T  7515235 gaatatctacatcactcaattacaaattcaaccaatgatttaggcgtcaacgttgcaaatcc 7515174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 489
Target Start/End: Original strand, 679148 - 679272
Alignment:
Q  365 ttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgat 464  Q
    ||||||| ||| |||||||||| |||  ||||| |||||||| |||||||||||||||||  || |||| ||||| |||   ||| |||   ||| |||     
T  679148 ttcgtttggtttttattgaaaggtcagtttcagtcaatcacatattcaatcaatgatttgagcgccaactttgcaaatctggaagcatgaatattctgac 679247  T
Q  465 gatttagattttatcatattcttcg 489  Q
    |||||||||||||||||||| ||||    
T  679248 gatttagattttatcatattattcg 679272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 424
Target Start/End: Complemental strand, 11321546 - 11321461
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttg 424  Q
    |||||||||| | ||||||||||  |||||||||| |||| |||||||||||| || |||| |||| ||| ||||||||||| |||||    
T  11321546 gtttgatttcacgtcttgttgtg--gtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattcaatcaattatttg 11321461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 484
Target Start/End: Complemental strand, 30608569 - 30608447
Alignment:
Q  362 gtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcatttt 461  Q
    |||||| ||| |||| |||||||||||| || | || |||| ||| |||||| |||||||||||  ||||||||||||||||   ||  ||||| ||||     
T  30608569 gtgttcatttagttcctattgaaagatcgacataagtcaattacaaattcaaccaatgatttgggtgtcaacgttgcagatctggaatcatgggtatttc 30608470  T
Q  462 gatgatttagattttatcatatt 484  Q
    | ||| ||| |||||||||||||    
T  30608469 ggtgacttatattttatcatatt 30608447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 34489254 - 34489304
Alignment:
Q  309 tgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtg 359  Q
    ||||||||| |||| ||||||||||||||||||||||| ||| ||||||||    
T  34489254 tgtgttgttcgtcgtcttgtgcgacgttgtttgatttcccatattgttgtg 34489304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 424
Target Start/End: Original strand, 19164688 - 19164809
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttct-tattgaaagatcaacttcagac 399  Q
    |||||||||||||||||||||| |||||||||  ||||||||||| |  || ||||||  |||| |||||| | ||| |||||||||| |  |||||| |    
T  19164688 tgcggcgttgtgttgtttgtcgtcttgtgcgaaattgtttgattttgtgtcatgttgt--ggtgatcgttt-gctctatattgaaagaccggcttcagcc 19164784  T
Q  400 aatcacagattcaatcaatgatttg 424  Q
    | | ||| |||||||||||||||||    
T  19164785 acttacatattcaatcaatgatttg 19164809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 28981072 - 28981113
Alignment:
Q  218 tttctctttctttcaatctaaataagtgatttccatatatat 259  Q
    |||| |||||||||||||||||||||||||||||| ||||||    
T  28981072 tttccctttctttcaatctaaataagtgatttccacatatat 28981113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 10228766 - 10228802
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10228766 attcaatcaaagatttggacgtcaacgttgcagatcc 10228802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 16419245 - 16419281
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  16419245 attcaatcaaagatttggacgtcaacgttgcagatcc 16419281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 425
Target Start/End: Original strand, 22571457 - 22571574
Alignment:
Q  307 gttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg-aaagatcaacttcagacaatcac 405  Q
    ||||||||||| |||| |||||||| ||||||||||||| || | ||||| |  ||||||||||| |||  ||||| ||| |||| |||||| | || ||    
T  22571457 gttgtgttgttcgtcgtcttgtgcggcgttgtttgattttgcgttttgttat--ggtgttcgtttggttaatattgaaaaaatcagcttcagtcgattac 22571554  T
Q  406 agattcaatcaatgatttgg 425  Q
    | |||||| |||||||||||    
T  22571555 aaattcaaccaatgatttgg 22571574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 444
Target Start/End: Complemental strand, 24227788 - 24227704
Alignment:
Q  360 cggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||| |||  ||| |||||||| ||| ||||||| |||| |||  |||||||||||||||| || |||||||| |||||||    
T  24227788 cggtgttcatttaattcatattgaaatatcgacttcagtcaattacaatttcaatcaatgatttgaacctcaacgttccagatcc 24227704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 35001677 - 35001713
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  35001677 attcaatcaaagatttggacgtcaacgttgcagatcc 35001713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 442
Target Start/End: Original strand, 6957203 - 6957266
Alignment:
Q  379 attgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagat 442  Q
    ||||| ||||| ||||||| |||| |||||||||||||||||||| | | ||||||||| ||||    
T  6957203 attgatagatcgacttcagtcaataacagattcaatcaatgatttaggcatcaacgttgtagat 6957266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 484
Target Start/End: Original strand, 20225894 - 20226009
Alignment:
Q  369 tttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatt 468  Q
    |||||||  ||||| |||||||||||||  || | ||| |||||||||||||||| | || | ||||||||||| |  ||| ||| | |||| ||||| |    
T  20225894 tttcgtttctattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagt 20225993  T
Q  469 tagattttatcatatt 484  Q
    |||| |||||||||||    
T  20225994 tagaatttatcatatt 20226009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 484
Target Start/End: Original strand, 22119878 - 22119993
Alignment:
Q  369 tttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatt 468  Q
    |||||||  ||||| |||||||||||||  || | ||| |||||||||||||||| | || | ||||||||||| |  ||| ||| | |||| ||||| |    
T  22119878 tttcgtttctattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagt 22119977  T
Q  469 tagattttatcatatt 484  Q
    |||| |||||||||||    
T  22119978 tagaatttatcatatt 22119993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 23947389 - 23947313
Alignment:
Q  311 tgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatc 389  Q
    ||||||| |||| |||||||| |||||||||||||| |||||  || |||||||||| |||  ||| ||||||||||||    
T  23947389 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccatct--ttttgcggtgttcatttgattcatattgaaagatc 23947313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 445
Target Start/End: Original strand, 4468645 - 4468682
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  4468645 attcaatcaaagatttggccgtcaacgttgcagatcca 4468682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 30493425 - 30493466
Alignment:
Q  218 tttctctttctttcaatctaaataagtgatttccatatatat 259  Q
    |||| ||||||||||| |||||||||||||||||| ||||||    
T  30493425 tttccctttctttcaaactaaataagtgatttccacatatat 30493466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 444
Target Start/End: Complemental strand, 68078 - 67973
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| | |||| |||  ||||| |||  |||| || ||||||||| || |||| |||| ||| |||||| ||| |||||| |||| ||||||    
T  68078 gtttgatttcgcgttttgtcgtg--gtgtttgttcagttcctaatgaaagatctacatcagtcaattacaaattcaaccaacgatttgtacgttaacgtt 67981  T
Q  437 gcagatcc 444  Q
    ||||||||    
T  67980 gcagatcc 67973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 1523307 - 1523335
Alignment:
Q  224 tttctttcaatctaaataagtgatttcca 252  Q
    |||||||||||||||||||||||||||||    
T  1523307 tttctttcaatctaaataagtgatttcca 1523335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 25398650 - 25398686
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||||||||||| |||||||||||| |||||    
T  25398650 attcaatcaatgatttgggcgtcaacgttgctgatcc 25398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 31225987 - 31226026
Alignment:
Q  218 tttctctttctttcaatctaaataagtgatttccatatata 258  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  31225987 tttctctttctttcaatc-aaataagtgatttccacatata 31226026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 1814 - 1610
Alignment:
Q  284 cgtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatctt--gttgtgcggtgttcgtttcgttctta 379  Q
    ||||||||||||||||   |||| |||| ||||||| |||| ||||| || |||||||||||||||||||||  ||||||  |||||||||| |||| ||    
T  1814 cgtgatttcgtcgtcttagtgcgacgttctgttgttcgtcgtcttgtccggcgttgtttgatttcgcatcttttgttgtgtagtgttcgtttggttcgta 1715  T
Q  380 ttgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatc 479  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||   ||||||| | ||||||| ||  ||||| ||| || ||||||||||||||||    
T  1714 ttgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggtatcaacgtagtagatccagaaacatgggtattctggtgatttagattttatc 1615  T
Q  480 atatt 484  Q
    |||||    
T  1614 atatt 1610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 324 - 484
Target Start/End: Complemental strand, 92586 - 92428
Alignment:
Q  324 cttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgattt 423  Q
    ||||||||| ||||||||||||| | ||||||||||  |||||||||| |||| |||||||||||||| || ||  ||||||||||||||||||||||||    
T  92586 cttgtgcgatgttgtttgatttcacgtcttgttgtg--gtgttcgtttggttcatattgaaagatcaattttagtaaatcacagattcaatcaatgattt 92489  T
Q  424 ggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||| ||||||| ||| ||||| ||| || |  |||| |||||||||||||    
T  92488 ggacgtcaacgttgtagatccagaagcatgggtattctggtagtttaaattttatcatatt 92428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 309 - 484
Target Start/End: Original strand, 6014 - 6187
Alignment:
Q  309 tgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacaga 408  Q
    ||||||||| |||| |||||||| |||||||||||||||| | ||||||  |||||||| ||| |||| ||||||||  | |||||||| |||||||| |    
T  6014 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttg--cggtgttcatttggttcatattgaaatgttaacttcagtcaatcacata 6111  T
Q  409 ttcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||| ||||| |||||||||||  ||| ||| | ||| || |||||||||||||||||||||    
T  6112 ttcaatcaatgatttggatgtcaatgttgcagatccggaagcatgtgtattctggtgatttagattttatcatatt 6187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 252
Target Start/End: Original strand, 5912 - 5941
Alignment:
Q  223 ctttctttcaatctaaataagtgatttcca 252  Q
    ||||||||||||||||||||||||||||||    
T  5912 ctttctttcaatctaaataagtgatttcca 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 286 - 484
Target Start/End: Original strand, 93065 - 93264
Alignment:
Q  286 tgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgat-ttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    ||||||||||||||   ||| |||||||||||||||| | |||||||| ||||||||||| ||||  ||||||||||  |||||||||| |||| |||||    
T  93065 tgatttcgtcgtctgagtgctgcgttgtgttgtttgttgtcttgtgcggcgttgtttgatattcgtgtcttgttgtg--gtgttcgtttggttcatattg 93162  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    |||||||   ||||  |||||||| ||| ||||||||||| |||||||||||||||||||||| ||  ||||| ||| || ||||||| |||||||||||    
T  93163 aaagatcggtttcactcaatcacatattgaatcaatgattaggacgtcaacgttgcagatccagaaatatgggtattctggtgatttaaattttatcata 93262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 333 - 484
Target Start/End: Complemental strand, 58169 - 58020
Alignment:
Q  333 cgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaa 432  Q
    |||| |||||||| || ||||||||  ||||||| ||||  ||| || |||||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  58169 cgttttttgattttgcgtcttgttg--cggtgtttgtttgtttcatactgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaa 58072  T
Q  433 cgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    | ||||||||||  ||| ||| | ||| || |||||||||||| ||||||||    
T  58071 cattgcagatccggaagcatgagtattctggtgatttagatttcatcatatt 58020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 58268 - 58233
Alignment:
Q  224 tttctttcaatctaaataagtgatttccatatatat 259  Q
    ||||||||||||||||||||||||||||| ||||||    
T  58268 tttctttcaatctaaataagtgatttccacatatat 58233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 1323 - 1501
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||||||||||||||| |||| |||||| | ||||   ||||||||| ||||||||  |||||||||||| |||| ||||||||||||  | |||| ||    
T  1323 tgcggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgttg--cggtgttcgtttagttcctattgaaagatcggcatcagtca 1417  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||| | |||| |||||| |||||||||||||| || | ||| ||| | |||| | |||||||| ||||||||||||    
T  1418 attacaaattcgaccaataatttgggcgtcaacgttgcagttctagaagcatgtgaatttcggtgatttaggttttatcatatt 1501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 301 - 484
Target Start/End: Original strand, 15470 - 15649
Alignment:
Q  301 tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagaca 400  Q
    ||||| ||||||||||| |||| |||||||| ||||  |||||||||| |||||| |  ||||||| |||   ||| |||||||||||| || |||| ||    
T  15470 tgcggtgttgtgttgttcgtcgtcttgtgcggcgtt--ttgatttcgcgtcttgtcg--cggtgtttgttcatttcctattgaaagatctacatcagtca 15565  T
Q  401 atcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    || ||| |||||| ||||||||||||||||||| ||||||||||  ||| ||||  |||| | ||| |||| ||||||||||||    
T  15566 attacaaattcaaccaatgatttggacgtcaacattgcagatccggaagcatggatatttcggtgacttaggttttatcatatt 15649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 285 - 484
Target Start/End: Complemental strand, 32875 - 32679
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   ||||||||| ||||||| |||| |||||||| ||||   ||||||||| |||||| |  |||| || |||  |||| |||||    
T  32875 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcg--cggtatttgttcagttcctattg 32781  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcata 482  Q
    ||||||| || |||  |||| ||| |||||| |||||||||||||||||||||||||||||   ||| ||| | |||| | ||| |||||||||||||||    
T  32780 aaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatctggaagcatgagtatttcggtgacttagattttatcata 32681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 339 - 484
Target Start/End: Complemental strand, 71375 - 71232
Alignment:
Q  339 ttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgc 438  Q
    |||||||||| |||||| |||  |||||||||| |||| |||| |||||||  | |||| |||| | | ||||||||||||||| ||  |||||||||||    
T  71375 ttgatttcgcgtcttgtcgtg--gtgttcgtttagttcctatttaaagatcggcatcagtcaattataaattcaatcaatgattggggtgtcaacgttgc 71278  T
Q  439 agatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||  ||| ||||| |||||||||| ||||||||||| |||||    
T  71277 agatccggaagcatgggtattttgatgacttagattttattatatt 71232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 484
Target Start/End: Complemental strand, 2050 - 1905
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    ||||||||||||||||||| |  |||||||  ||| |||| |||||||||||| || | || |||| ||| |||||| ||||| ||||| ||||||||||    
T  2050 gtttgatttcgcatcttgtcg--cggtgtttttttagttcctattgaaagatctacattagtcaattacaaattcaaccaatggtttgggcgtcaacgtt 1953  T
Q  437 gcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||| |||  ||  | |||| | |||||||| ||||||||||||    
T  1952 gcagatccgaaaacataagtatttcggtgatttaggttttatcatatt 1905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 484
Target Start/End: Original strand, 8524 - 8669
Alignment:
Q  337 gtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgtt 436  Q
    |||||||||||| |||||| |  || ||||||||| |||| |||||||||||| || |||| |  | ||| |||||| ||||||||||| ||||||||||    
T  8524 gtttgatttcgcgtcttgtcg--cgatgttcgtttagttcctattgaaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgtt 8621  T
Q  437 gcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||   ||||||||| |||| | ||| |||  ||||||||||||    
T  8622 gcagatctggaagaatgggtatttcggtgaattatgttttatcatatt 8669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 368 - 439
Target Start/End: Complemental strand, 19122 - 19051
Alignment:
Q  368 gtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgca 439  Q
    |||| |||| ||||||||||| |||||||| |||||||||| ||||||||||||||||| ||||| ||||||    
T  19122 gtttggttcatattgaaagatgaacttcagtcaatcacagaatcaatcaatgatttggaggtcaatgttgca 19051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 1876 - 1751
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcat 458  Q
    |||||||||||||  ||  ||||| |||||| || || |  ||| ||| |||||||||||||||||| |  |||||||||||||||  ||| ||||| ||    
T  1876 gcggtgttcgtttaatttctattggaagatcgacatcggtaaattacaaattcaatcaatgatttgggcaccaacgttgcagatccggaagcatgggtat 1777  T
Q  459 tttgatgatttagattttatcatatt 484  Q
    || ||||| ||| |||||||||||||    
T  1776 ttcgatgacttatattttatcatatt 1751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 484
Target Start/End: Original strand, 4273 - 4329
Alignment:
Q  428 gtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    ||||||||||||||||| ||||  || | ||||||||||||||||||||||||||||    
T  4273 gtcaacgttgcagatccgaaagcttgagtattttgatgatttagattttatcatatt 4329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 484
Target Start/End: Complemental strand, 31317 - 31206
Alignment:
Q  373 gttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttaga 472  Q
    |||| |||||||||||| || |||  |||| ||| |||||||||| ||||||  | |||| |||||||||||  ||| ||||| |||| | ||| |||||    
T  31317 gttcctattgaaagatcgacatcactcaattacaaattcaatcaacgatttgagcatcaatgttgcagatccggaagcatgggtatttcggtgacttaga 31218  T
Q  473 ttttatcatatt 484  Q
    ||||||||||||    
T  31217 ttttatcatatt 31206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 445
Target Start/End: Complemental strand, 10170 - 10013
Alignment:
Q  285 gtgatttcgtcgtctc--tgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgttcttattg 382  Q
    |||||||||||||||   |||||| |||| ||||| |||| |||||||| ||||   ||||||||| |||||| |  |||||||| |||  ||| |||||    
T  10170 gtgatttcgtcgtctaagtgcggctttgttttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcg--cggtgttcatttaattcctattg 10076  T
Q  383 aaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcca 445  Q
    ||||||| || ||   |||| ||| |||||| ||||||||||   ||||||||||||||||||    
T  10075 aaagatcgacatcgatcaattacaaattcaaccaatgatttgagagtcaacgttgcagatcca 10013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 425
Target Start/End: Original strand, 38088 - 38151
Alignment:
Q  362 gtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttgg 425  Q
    |||||||||| |||| |||||||||||  ||||||| |||| ||| |||||||| |||||||||    
T  38088 gtgttcgtttagttcatattgaaagatagacttcagtcaattacaaattcaatcgatgatttgg 38151  T

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Target: scaffold0095 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 430
Target Start/End: Original strand, 9421 - 9490
Alignment:
Q  361 ggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtc 430  Q
    ||||||||||| ||| || ||||||||||||||| || |||| ||| |||||||||| |||||| |||||    
T  9421 ggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaatcaacgatttgaacgtc 9490  T

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Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 50848 - 50893
Alignment:
Q  399 caatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||||    
T  50848 caattacaaattcaaccaatgatttggacgtcaacgttgcagatcc 50893  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 359 - 444
Target Start/End: Complemental strand, 71921 - 71836
Alignment:
Q  359 gcggtgttcgtttcgttcttattgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||| |||  |||| |||||||||||| || | || |||| ||| |||||| |||||||||||| |||||||||| ||||||    
T  71921 gcggtgtttgttcagttcctattgaaagatctacattagtcaattacaaattcaaccaatgatttggatgtcaacgttgtagatcc 71836  T

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Target: scaffold0495 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 5485 - 5521
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||||||||||    
T  5485 attcaatcaaagatttggacgtcaacgttgcagatcc 5521  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 4057 - 4017
Alignment:
Q  399 caatcacagattcaatcaatgatttggacgtcaacgttgca 439  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  4057 caatcacagattcaaccaatgatttagacgtcaacgttgca 4017  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 484
Target Start/End: Complemental strand, 66079 - 65974
Alignment:
Q  379 attgaaagatcaacttcagacaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttat 478  Q
    |||| |||||| || |||| |||| ||| |||||| |||||||||||  | |||||||||||||||  ||| ||||| |||| | ||| |||  ||||||    
T  66079 attggaagatcgacatcagtcaattacaaattcaaccaatgatttgggtgccaacgttgcagatccggaagcatgggtatttcggtgacttatgttttat 65980  T
Q  479 catatt 484  Q
    ||||||    
T  65979 catatt 65974  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Original strand, 8778 - 8814
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  8778 attcaatcaaagatttgggcgtcaacgttgcagatcc 8814  T

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Target: scaffold0146 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 16310 - 16274
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  16310 attcaatcaaagatttgggcgtcaacgttgcagatcc 16274  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 484
Target Start/End: Original strand, 36906 - 36982
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatatt 484  Q
    |||||||||||||||||| |||||| |||||  |||   ||| ||||| ||||   |||||||||||||||||||||    
T  36906 attcaatcaatgatttgggcgtcaatgttgctaatctggaagcatgggtatttcagtgatttagattttatcatatt 36982  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 361789 - 361753
Alignment:
Q  408 attcaatcaatgatttggacgtcaacgttgcagatcc 444  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  361789 attcaatcaaagatttggacgtcaacgttgtagatcc 361753  T

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