View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19642_high_8 (Length: 350)

Name: NF19642_high_8
Description: NF19642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19642_high_8
NF19642_high_8
[»] chr1 (60 HSPs)
chr1 (10-173)||(44875091-44875254)
chr1 (10-172)||(25990661-25990823)
chr1 (10-173)||(23873912-23874075)
chr1 (10-173)||(28017570-28017733)
chr1 (10-173)||(40219969-40220131)
chr1 (10-173)||(46949233-46949396)
chr1 (12-173)||(29488660-29488821)
chr1 (10-173)||(28916600-28916763)
chr1 (10-173)||(38942526-38942689)
chr1 (10-173)||(9127955-9128118)
chr1 (10-173)||(15285716-15285878)
chr1 (10-173)||(18036457-18036619)
chr1 (10-173)||(40935698-40935861)
chr1 (10-173)||(40960559-40960722)
chr1 (10-173)||(18852135-18852298)
chr1 (10-173)||(35941753-35941916)
chr1 (20-173)||(26907184-26907337)
chr1 (10-173)||(43656122-43656284)
chr1 (10-173)||(49924331-49924494)
chr1 (10-173)||(26479651-26479814)
chr1 (10-163)||(4529109-4529262)
chr1 (10-163)||(39026331-39026484)
chr1 (10-155)||(47996884-47997029)
chr1 (10-171)||(6848391-6848550)
chr1 (10-166)||(45357961-45358117)
chr1 (10-173)||(31970394-31970556)
chr1 (10-169)||(35189116-35189276)
chr1 (207-335)||(52782609-52782735)
chr1 (10-153)||(15311110-15311252)
chr1 (10-173)||(35884134-35884286)
chr1 (10-161)||(18913430-18913582)
chr1 (12-163)||(36383850-36384001)
chr1 (12-166)||(44056385-44056540)
chr1 (36-172)||(16661431-16661569)
chr1 (30-171)||(7397624-7397765)
chr1 (36-172)||(15912116-15912251)
chr1 (30-117)||(25185406-25185492)
chr1 (10-172)||(41063657-41063820)
chr1 (30-121)||(44510321-44510411)
chr1 (31-172)||(5858474-5858617)
chr1 (30-83)||(13351686-13351739)
chr1 (120-173)||(44149044-44149097)
chr1 (120-172)||(7468165-7468217)
chr1 (120-172)||(28016956-28017008)
chr1 (126-166)||(43667487-43667527)
chr1 (62-171)||(51339032-51339142)
chr1 (55-171)||(35366330-35366447)
chr1 (126-172)||(6786734-6786780)
chr1 (120-172)||(298879-298931)
chr1 (120-172)||(6785353-6785405)
chr1 (120-172)||(6787203-6787255)
chr1 (126-166)||(12449154-12449194)
chr1 (126-166)||(32624193-32624233)
chr1 (126-166)||(39555773-39555813)
chr1 (62-171)||(51840630-51840740)
chr1 (126-172)||(15959858-15959904)
chr1 (50-172)||(34102095-34102216)
chr1 (30-83)||(45840167-45840220)
chr1 (120-172)||(4672796-4672848)
chr1 (30-82)||(37735485-37735537)
[»] chr8 (63 HSPs)
chr8 (10-173)||(35259972-35260135)
chr8 (10-173)||(27621045-27621208)
chr8 (10-173)||(24612563-24612726)
chr8 (10-173)||(37597985-37598148)
chr8 (10-173)||(11043972-11044135)
chr8 (10-171)||(27752503-27752664)
chr8 (10-173)||(3099867-3100031)
chr8 (10-173)||(35344281-35344445)
chr8 (10-173)||(44052535-44052699)
chr8 (10-173)||(44411292-44411456)
chr8 (10-173)||(36537973-36538136)
chr8 (10-166)||(25321669-25321825)
chr8 (10-173)||(35346387-35346550)
chr8 (10-171)||(11992644-11992806)
chr8 (10-173)||(39187149-39187311)
chr8 (10-173)||(33851106-33851269)
chr8 (10-171)||(32678592-32678753)
chr8 (10-152)||(44358574-44358716)
chr8 (10-144)||(37567514-37567648)
chr8 (17-173)||(12108084-12108240)
chr8 (10-117)||(31133112-31133219)
chr8 (10-105)||(34713511-34713606)
chr8 (43-173)||(16635490-16635620)
chr8 (30-172)||(17314744-17314887)
chr8 (43-173)||(16635354-16635488)
chr8 (108-171)||(31133765-31133828)
chr8 (19-173)||(2238685-2238828)
chr8 (30-166)||(8673302-8673438)
chr8 (43-173)||(16635622-16635756)
chr8 (56-133)||(40487794-40487870)
chr8 (19-118)||(24510787-24510886)
chr8 (19-102)||(41426325-41426408)
chr8 (14-173)||(16643296-16643457)
chr8 (30-117)||(17336713-17336799)
chr8 (30-166)||(41791563-41791699)
chr8 (33-119)||(34899894-34899979)
chr8 (58-172)||(17713137-17713252)
chr8 (120-172)||(13144174-13144226)
chr8 (60-172)||(5217306-5217419)
chr8 (59-141)||(16635786-16635871)
chr8 (30-156)||(25195149-25195277)
chr8 (53-141)||(16643195-16643284)
chr8 (120-172)||(4047107-4047159)
chr8 (31-160)||(27819585-27819715)
chr8 (55-163)||(28497641-28497750)
chr8 (120-163)||(41809016-41809059)
chr8 (55-166)||(26954520-26954632)
chr8 (126-172)||(34890393-34890439)
chr8 (30-119)||(41362410-41362498)
chr8 (126-166)||(7022591-7022631)
chr8 (126-166)||(7858460-7858500)
chr8 (120-172)||(24892733-24892785)
chr8 (120-172)||(35525493-35525545)
chr8 (120-172)||(36190666-36190718)
chr8 (126-166)||(38072117-38072157)
chr8 (127-166)||(41362846-41362885)
chr8 (126-172)||(13143659-13143705)
chr8 (120-166)||(30576040-30576086)
chr8 (30-83)||(4038984-4039037)
chr8 (30-83)||(29147340-29147393)
chr8 (31-84)||(36190775-36190828)
chr8 (10-63)||(40486575-40486628)
chr8 (31-83)||(14576249-14576301)
[»] chr4 (61 HSPs)
chr4 (10-173)||(53677527-53677690)
chr4 (10-173)||(39970037-39970200)
chr4 (10-171)||(3043215-3043376)
chr4 (10-173)||(29180460-29180623)
chr4 (10-173)||(30776532-30776695)
chr4 (10-173)||(30777396-30777559)
chr4 (10-173)||(49901935-49902099)
chr4 (10-173)||(32012375-32012538)
chr4 (10-173)||(43980407-43980570)
chr4 (10-173)||(50768354-50768517)
chr4 (10-173)||(52712972-52713135)
chr4 (10-173)||(1619938-1620101)
chr4 (10-173)||(9798123-9798286)
chr4 (10-173)||(10591551-10591713)
chr4 (10-171)||(37788362-37788523)
chr4 (10-171)||(38940780-38940941)
chr4 (10-173)||(55937751-55937914)
chr4 (10-173)||(38187774-38187937)
chr4 (10-173)||(29899624-29899787)
chr4 (13-155)||(51495079-51495218)
chr4 (23-171)||(27750409-27750557)
chr4 (10-120)||(47807157-47807267)
chr4 (12-166)||(30012004-30012157)
chr4 (39-173)||(5222370-5222509)
chr4 (19-139)||(5234059-5234179)
chr4 (30-172)||(23978210-23978353)
chr4 (30-172)||(37911798-37911941)
chr4 (36-172)||(8013190-8013327)
chr4 (31-171)||(8178335-8178475)
chr4 (119-171)||(47806809-47806861)
chr4 (17-172)||(40553684-40553839)
chr4 (53-155)||(17236342-17236446)
chr4 (36-166)||(40411021-40411152)
chr4 (120-172)||(16605040-16605092)
chr4 (56-172)||(28318538-28318655)
chr4 (31-166)||(47516287-47516423)
chr4 (120-172)||(17186987-17187039)
chr4 (55-172)||(53848381-53848499)
chr4 (30-172)||(28142717-28142860)
chr4 (29-83)||(32410332-32410386)
chr4 (126-172)||(35310954-35311000)
chr4 (120-166)||(35529572-35529618)
chr4 (49-119)||(38140826-38140896)
chr4 (56-166)||(46070641-46070753)
chr4 (31-100)||(17799230-17799299)
chr4 (127-172)||(55580562-55580607)
chr4 (126-166)||(2229179-2229219)
chr4 (126-166)||(14332691-14332731)
chr4 (126-166)||(26916257-26916297)
chr4 (120-172)||(39078052-39078104)
chr4 (126-166)||(42915430-42915470)
chr4 (120-172)||(48793831-48793883)
chr4 (38-166)||(49080175-49080306)
chr4 (33-84)||(7652121-7652172)
chr4 (120-166)||(4058615-4058661)
chr4 (126-163)||(4512954-4512991)
chr4 (30-83)||(5064750-5064803)
chr4 (50-171)||(5841894-5842016)
chr4 (91-166)||(29511366-29511440)
chr4 (126-166)||(41414789-41414829)
chr4 (126-166)||(47867811-47867851)
[»] chr6 (22 HSPs)
chr6 (10-173)||(10227824-10227987)
chr6 (10-171)||(12278620-12278781)
chr6 (10-170)||(17721891-17722051)
chr6 (10-167)||(374017-374174)
chr6 (10-166)||(30949054-30949210)
chr6 (10-173)||(33756168-33756331)
chr6 (10-163)||(17598215-17598368)
chr6 (10-173)||(30766358-30766521)
chr6 (10-171)||(31887203-31887365)
chr6 (30-151)||(3888362-3888484)
chr6 (30-172)||(4031901-4032044)
chr6 (31-171)||(5300696-5300836)
chr6 (41-171)||(32882806-32882925)
chr6 (30-166)||(4987863-4988000)
chr6 (30-119)||(16524349-16524436)
chr6 (33-102)||(21963941-21964009)
chr6 (126-166)||(3095908-3095948)
chr6 (126-166)||(21542352-21542392)
chr6 (126-172)||(1130433-1130479)
chr6 (90-172)||(5822182-5822266)
chr6 (37-82)||(16655200-16655245)
chr6 (126-166)||(35129242-35129282)
[»] chr2 (47 HSPs)
chr2 (10-173)||(792437-792600)
chr2 (10-173)||(29514100-29514263)
chr2 (10-173)||(33635248-33635411)
chr2 (10-173)||(21539669-21539832)
chr2 (10-169)||(14565454-14565614)
chr2 (10-173)||(8784307-8784470)
chr2 (22-169)||(28424190-28424337)
chr2 (10-173)||(29514556-29514718)
chr2 (10-173)||(38549724-38549887)
chr2 (10-173)||(43075662-43075825)
chr2 (10-171)||(5091621-5091784)
chr2 (10-169)||(35832328-35832487)
chr2 (10-166)||(4033756-4033912)
chr2 (10-166)||(28492439-28492595)
chr2 (10-173)||(4091922-4092086)
chr2 (10-173)||(10478087-10478253)
chr2 (10-161)||(44803823-44803973)
chr2 (12-166)||(18833993-18834149)
chr2 (59-171)||(15858740-15858852)
chr2 (37-155)||(22162249-22162368)
chr2 (10-118)||(43451472-43451580)
chr2 (12-171)||(15068660-15068808)
chr2 (90-173)||(10979104-10979186)
chr2 (12-137)||(9294603-9294728)
chr2 (30-171)||(26998234-26998376)
chr2 (30-156)||(20380055-20380182)
chr2 (30-166)||(32273593-32273730)
chr2 (30-172)||(44442049-44442190)
chr2 (13-118)||(13822854-13822959)
chr2 (30-172)||(38070912-38071054)
chr2 (10-57)||(10979197-10979244)
chr2 (30-171)||(32010019-32010161)
chr2 (30-166)||(9709436-9709572)
chr2 (62-144)||(38071571-38071658)
chr2 (90-172)||(25571941-25572025)
chr2 (31-166)||(11031025-11031161)
chr2 (126-172)||(19263996-19264042)
chr2 (126-166)||(6110387-6110427)
chr2 (120-172)||(29524252-29524304)
chr2 (120-172)||(33198846-33198898)
chr2 (120-172)||(45660259-45660311)
chr2 (90-166)||(40808892-40808970)
chr2 (120-166)||(5280692-5280738)
chr2 (10-47)||(38071531-38071568)
chr2 (126-163)||(41528193-41528230)
chr2 (120-172)||(28858206-28858258)
chr2 (126-166)||(45085191-45085231)
[»] chr7 (53 HSPs)
chr7 (10-173)||(43107945-43108109)
chr7 (10-173)||(35181103-35181266)
chr7 (10-173)||(45598815-45598978)
chr7 (10-170)||(23106366-23106527)
chr7 (10-171)||(41889084-41889245)
chr7 (10-166)||(47383324-47383480)
chr7 (10-173)||(21654161-21654324)
chr7 (10-173)||(34808130-34808293)
chr7 (10-173)||(41815733-41815896)
chr7 (10-171)||(3157349-3157510)
chr7 (10-173)||(36576329-36576492)
chr7 (10-173)||(48879299-48879462)
chr7 (10-161)||(40583068-40583219)
chr7 (10-173)||(44600357-44600520)
chr7 (10-171)||(19933095-19933256)
chr7 (10-171)||(19964234-19964395)
chr7 (10-166)||(40560300-40560456)
chr7 (10-161)||(23731483-23731634)
chr7 (10-173)||(42617582-42617745)
chr7 (10-154)||(22111370-22111514)
chr7 (10-166)||(32491147-32491302)
chr7 (10-171)||(48937929-48938088)
chr7 (10-171)||(48942955-48943114)
chr7 (10-173)||(41890282-41890463)
chr7 (10-173)||(9818392-9818542)
chr7 (10-173)||(10720317-10720467)
chr7 (10-171)||(18206359-18206509)
chr7 (30-165)||(39348708-39348843)
chr7 (30-166)||(39337445-39337584)
chr7 (10-173)||(7989348-7989493)
chr7 (12-173)||(30082275-30082425)
chr7 (12-110)||(33153013-33153111)
chr7 (12-122)||(35084143-35084253)
chr7 (30-156)||(31769063-31769189)
chr7 (30-163)||(35888070-35888203)
chr7 (12-84)||(28608373-28608445)
chr7 (19-156)||(29236117-29236242)
chr7 (30-97)||(48339322-48339389)
chr7 (10-172)||(38260231-38260395)
chr7 (60-166)||(22369148-22369255)
chr7 (30-166)||(39170457-39170593)
chr7 (120-173)||(18800913-18800966)
chr7 (126-171)||(25944474-25944519)
chr7 (125-166)||(47557932-47557973)
chr7 (126-166)||(18102463-18102503)
chr7 (126-166)||(24151777-24151817)
chr7 (120-172)||(47778669-47778721)
chr7 (31-84)||(25944581-25944634)
chr7 (126-166)||(14805804-14805844)
chr7 (126-166)||(15252798-15252838)
chr7 (30-102)||(18800834-18800906)
chr7 (126-166)||(46760444-46760484)
chr7 (115-155)||(48341575-48341615)
[»] chr5 (47 HSPs)
chr5 (10-173)||(31690702-31690865)
chr5 (10-173)||(8146095-8146258)
chr5 (10-173)||(13146643-13146806)
chr5 (10-173)||(42364953-42365112)
chr5 (10-171)||(20914775-20914936)
chr5 (10-173)||(30086630-30086793)
chr5 (10-173)||(35462800-35462963)
chr5 (10-171)||(37066305-37066466)
chr5 (10-163)||(8541646-8541799)
chr5 (10-173)||(12638804-12638966)
chr5 (10-173)||(16286165-16286328)
chr5 (10-165)||(24432482-24432637)
chr5 (10-171)||(25962530-25962695)
chr5 (10-155)||(31316883-31317028)
chr5 (10-156)||(17825280-17825425)
chr5 (12-171)||(24439488-24439647)
chr5 (12-163)||(8143858-8144009)
chr5 (12-118)||(2002217-2002323)
chr5 (49-173)||(20452543-20452668)
chr5 (36-172)||(28906984-28907122)
chr5 (36-172)||(28943379-28943517)
chr5 (30-151)||(3463917-3464040)
chr5 (114-172)||(32433570-32433628)
chr5 (30-151)||(8959577-8959699)
chr5 (30-172)||(16153447-16153590)
chr5 (55-172)||(8506353-8506471)
chr5 (120-172)||(42273546-42273598)
chr5 (55-151)||(1144624-1144720)
chr5 (55-151)||(10154055-10154152)
chr5 (56-172)||(32079421-32079538)
chr5 (126-172)||(9957634-9957680)
chr5 (55-166)||(29307317-29307428)
chr5 (126-171)||(8225361-8225406)
chr5 (126-171)||(39505450-39505495)
chr5 (120-172)||(12730199-12730251)
chr5 (90-166)||(25840766-25840843)
chr5 (126-172)||(20643911-20643957)
chr5 (126-172)||(34425227-34425273)
chr5 (120-166)||(38280748-38280794)
chr5 (31-84)||(42273654-42273705)
chr5 (29-82)||(445990-446043)
chr5 (47-84)||(15006413-15006450)
chr5 (126-166)||(842753-842793)
chr5 (126-166)||(11262071-11262111)
chr5 (120-172)||(12793019-12793071)
chr5 (126-166)||(37522777-37522817)
chr5 (126-166)||(37562949-37562989)
[»] chr3 (65 HSPs)
chr3 (10-173)||(26641156-26641319)
chr3 (10-171)||(55400653-55400814)
chr3 (10-173)||(23513480-23513643)
chr3 (10-173)||(31126125-31126288)
chr3 (10-173)||(21654157-21654321)
chr3 (10-171)||(46580451-46580612)
chr3 (10-173)||(1335023-1335186)
chr3 (10-163)||(28793084-28793238)
chr3 (10-173)||(53020095-53020259)
chr3 (10-173)||(51426530-51426695)
chr3 (10-173)||(45781310-45781473)
chr3 (10-170)||(37324128-37324292)
chr3 (20-169)||(13541194-13541343)
chr3 (10-163)||(43575881-43576033)
chr3 (10-155)||(46296121-46296266)
chr3 (10-166)||(51255108-51255262)
chr3 (10-166)||(16739204-16739355)
chr3 (10-173)||(32322283-32322446)
chr3 (13-159)||(52172057-52172204)
chr3 (32-173)||(46819962-46820103)
chr3 (10-119)||(49068018-49068127)
chr3 (12-166)||(36189052-36189206)
chr3 (10-118)||(52252004-52252112)
chr3 (90-173)||(34022534-34022617)
chr3 (30-172)||(22456069-22456212)
chr3 (30-171)||(22479115-22479257)
chr3 (30-172)||(21214155-21214298)
chr3 (36-172)||(23209347-23209484)
chr3 (12-161)||(51309348-51309487)
chr3 (10-68)||(45347757-45347815)
chr3 (30-171)||(10251926-10252068)
chr3 (30-166)||(2994479-2994616)
chr3 (29-172)||(38401294-38401438)
chr3 (119-171)||(49067028-49067080)
chr3 (36-161)||(49583890-49584016)
chr3 (31-171)||(54725665-54725806)
chr3 (10-60)||(34022625-34022675)
chr3 (112-173)||(45347814-45347875)
chr3 (30-171)||(10114827-10114968)
chr3 (31-166)||(34194808-34194944)
chr3 (30-166)||(47444034-47444174)
chr3 (12-96)||(46303534-46303618)
chr3 (31-166)||(30454786-30454923)
chr3 (30-83)||(25242239-25242292)
chr3 (128-173)||(33974738-33974783)
chr3 (39-145)||(48291763-48291870)
chr3 (12-156)||(7886660-7886806)
chr3 (126-172)||(2927189-2927235)
chr3 (126-172)||(14752385-14752431)
chr3 (31-84)||(50651099-50651152)
chr3 (126-166)||(11054454-11054494)
chr3 (120-171)||(37074860-37074911)
chr3 (120-171)||(46711830-46711881)
chr3 (30-84)||(20847329-20847383)
chr3 (128-166)||(36546480-36546518)
chr3 (128-166)||(36561797-36561835)
chr3 (10-83)||(8097059-8097132)
chr3 (30-119)||(10014238-10014326)
chr3 (31-84)||(35963161-35963214)
chr3 (31-84)||(50730118-50730171)
chr3 (31-84)||(50782683-50782736)
chr3 (50-82)||(3972286-3972318)
chr3 (50-82)||(3997560-3997592)
chr3 (120-172)||(6074983-6075035)
chr3 (126-166)||(23311739-23311779)
[»] scaffold0495 (1 HSPs)
scaffold0495 (10-173)||(4543-4705)
[»] scaffold0330 (1 HSPs)
scaffold0330 (30-151)||(3105-3227)
[»] scaffold0132 (2 HSPs)
scaffold0132 (120-171)||(910-961)
scaffold0132 (120-171)||(8870-8921)
[»] scaffold0009 (1 HSPs)
scaffold0009 (120-166)||(157697-157743)
[»] scaffold0045 (1 HSPs)
scaffold0045 (126-166)||(77891-77931)
[»] scaffold0774 (1 HSPs)
scaffold0774 (126-166)||(3615-3655)
[»] scaffold0018 (1 HSPs)
scaffold0018 (126-166)||(154795-154835)


Alignment Details
Target: chr1 (Bit Score: 156; Significance: 8e-83; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 44875254 - 44875091
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  44875254 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 44875155  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44875154 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 44875091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 25990823 - 25990661
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  25990823 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 25990724  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25990723 aaaacataataatagcataaaaattggtcttttttgcttatattttgagacaaagaatatgag 25990661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 23873912 - 23874075
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  23873912 ataattttcattggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 23874011  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23874012 aaaacataataatagcataaaagttggtcttttttgcgtatattttgagacaaagaatatgaga 23874075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 28017733 - 28017570
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  28017733 ataattatcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 28017634  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  28017633 aaaacataataatagcataaaagttgatcttttttgcttatattttgagataaagaatatgaga 28017570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 40220131 - 40219969
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  40220131 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagat-atttgtttgaa 40220033  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  40220032 aaaacataataatagcataaaaattagtcttttttgcttatattttgagacaaagaatatgaga 40219969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 46949396 - 46949233
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  |||||||||||||||||||    
T  46949396 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgcatttaattttacattgaaaaagatgatttgtttgaa 46949297  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46949296 aaaacataataataacataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 46949233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 12 - 173
Target Start/End: Complemental strand, 29488821 - 29488660
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| || |||||||||||||    
T  29488821 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaatattatttgtttgaaaa 29488722  T
Q  112 aacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29488721 aacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaaaatgaga 29488660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 28916600 - 28916763
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  28916600 ataattttcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaa 28916699  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  28916700 aaaacataataatagcataaaagtttgtcttttttacttatattttgagacaaaaaatatgaga 28916763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 38942526 - 38942689
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||    
T  38942526 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaaaatgatttgtttgaa 38942625  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  38942626 aaaacataataatagcataaaagttgatcttttttgcttatattttgagacaaagaaaatgaga 38942689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 9128118 - 9127955
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| |||||||||||| |||  |||||||||||||||||||    
T  9128118 ataattctcattggttaaaaattatggagaaaataaaaaggtaaataaattgaatgcaatttacatttaattttacattgaaaaagatgatttgtttgaa 9128019  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9128018 aaaatataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 9127955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 15285878 - 15285716
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  15285878 ataattctcattggttaaaaattatggagaaaaaaaaaag-agaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaa 15285780  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15285779 aaaacataataatggcataaaaattggtcttttttgcttatattttgagacaaagaatatgaga 15285716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 18036619 - 18036457
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  18036619 ataattctcattggttaaaaattatgaagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttactttggaaaagatgatttgtttgaa 18036520  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  18036519 aaaacataataatagcataaaagttggtctttttt-cttatattttgagacaaagaaaatgaga 18036457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 40935698 - 40935861
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  40935698 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 40935797  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
     |||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  40935798 gaaacataaaaatagcataaaagttgatcttttttgcttatattttgagacaaagaaaatgaga 40935861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 40960559 - 40960722
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||  |||||||||||||||||||    
T  40960559 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaa 40960658  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  40960659 aaaacataaaaatagcataaaagttgatcttttttgcttatattttgagacaaagaaaatgaga 40960722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 18852298 - 18852135
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| || |||||||||||    
T  18852298 ataattctcattggttaaaaattatggagaaaataaaaaggggaacaaattgaatgcaatttgcatttaattttacattggaaaaaataatttgtttgaa 18852199  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  18852198 aaaacataataatgacataaaagtaggtcttttatgcttatattttgagacaaagaatatgaga 18852135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 35941916 - 35941753
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||  |||||||||||||||||||    
T  35941916 ataattttcattgattaaaaattatggagaaaataaaaaagagaacaaattgaatgcaatttgtatttaattttacattgaaaaagatgatttgtttgaa 35941817  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  35941816 aaaacataataatagcataaaagttgattttttttgcttatattttgagacaaagaatatgaga 35941753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 26907184 - 26907337
Alignment:
Q  20 ttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  26907184 ttggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaagataatttgtttgaaaaaacataat 26907283  T
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  26907284 aatagcataaaagttggtcttttttacttatattttgagacaaagaaaatgaga 26907337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 43656122 - 43656284
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  43656122 ataattttcattggttaaaaattatgaagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 43656221  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||  ||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  43656222 aaaacataataatgacataaaagttgat-ttttttccttatattttgagacaaagaatatgaga 43656284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 49924494 - 49924331
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||| || ||||||||||||||| ||| ||||||||||||||||||||    
T  49924494 ataattctcattggttaaaaatcatgaagaaaataaaaaggagaacaaattaaatgtaacttgcatttaattttacattggaaaagatgatttgtttgaa 49924395  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  49924394 aaaacataaaaatagcataaaagttgatcttttttgcttatattttgagacaaagaaaatgaga 49924331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 26479814 - 26479651
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||| ||||||| ||| ||||||||||||||||||||    
T  26479814 ataattctcattggttaaaaactatagagaaaataaaaaggagaacatattgaatgcaattttcattgaattttacattggaaaagatgatttgtttgaa 26479715  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| |||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  26479714 aaaatataataatggcataaaagttggttttttttgtttatattttgagacaaagaatatgaga 26479651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 10 - 163
Target Start/End: Complemental strand, 4529262 - 4529109
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||  |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||    
T  4529262 ataattctcatctgttaaaaattatggagaaaacaaaaagaagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttatttgaa 4529163  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaa 163  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4529162 aaaacataataatagcataaaagttgatcttttttgcttatattttgagacaaa 4529109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 10 - 163
Target Start/End: Original strand, 39026331 - 39026484
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| ||| ||||| ||||||| ||||||    
T  39026331 ataattcttattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattggaaaatatgatttatttgaa 39026430  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaa 163  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39026431 aaaacataaaaatagcataaaagttggtcttttttgcttatattttgagacaaa 39026484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 47997029 - 47996884
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  47997029 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgtatttaattttacattggaaaagatgatttgtttgaa 47996930  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatatttt 155  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||    
T  47996929 aaaacataataatagcataaaaattgatcttttttgcttatatttt 47996884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 6848391 - 6848550
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-a 108  Q
    |||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||| |||||||||||||||| | |    
T  6848391 ataattctcattggttaaaaattatggagaaaataaaaaggataacgcattgaatgcaatttgcatttaattttagattggaaaagatgatttgttagaa 6848490  T
Q  109 aaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||    
T  6848491 aaaaacataataatagcataaaa---agtcttttttgcttatattttgagacaaagaatatga 6848550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 166
Target Start/End: Original strand, 45357961 - 45358117
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||  || ||||||||||| ||| ||||||||||||||||||||    
T  45357961 ataattctcattggttaaaaattatggagaaaataaaaaggtgaacaaattaaatgcaacatgtatttaattttacattggaaaagatgatttgtttgaa 45358060  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    | ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  45358061 ataacataaaaatagcataaaagttggttttttttgcttatattttgagacaaagaa 45358117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 31970394 - 31970556
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  31970394 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 31970493  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    || |||||| |||| ||||||||||| |||||||| |||||||||||| |||||||| ||||||    
T  31970494 aagacataaaaataacataaaagttgatctttttt-cttatattttgatacaaagaaaatgaga 31970556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 35189276 - 35189116
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||| |||  ||||||| |||||||||||    
T  35189276 ataattttcattggttaaaaattatggagaaaataaagaggagaacacattgaatgcaatttgtagttaattttacattgaaaaagattatttgtttgaa 35189177  T
Q  110 -aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatat 169  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35189176 aaaaacataataataccataaaagttggtcttttttgcttatattttgagacaaagaatat 35189116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 207 - 335
Target Start/End: Original strand, 52782609 - 52782735
Alignment:
Q  207 tacatatgtatctccggtttgtgtcttttccaataccatataggaatggaggtaaaagctatcataggctcagccacaaacagaaaactaggcttatgag 306  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  52782609 tacatatgtatc--cagtttgtgtcttttccaataccatataggaatggaggtaaaatctatcataggctcagccaaaaacagaaaactaggcttatgag 52782706  T
Q  307 tttgaattatcttattcaggtgaagttgt 335  Q
    |||||||||||||||||||||||||||||    
T  52782707 tttgaattatcttattcaggtgaagttgt 52782735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 15311252 - 15311110
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| | ||||||||||||| |||  |||||||| ||||||||||    
T  15311252 ataattctcattggttaaaaattatagagaaaataaaaaggagaacaaattgaatacaact-gcatttaattttacattgaaaaagatgttttgtttgaa 15311154  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatatt 153  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||    
T  15311153 aaaacataataacagcataaaagttgatcttttttgtttatatt 15311110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 35884286 - 35884134
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||||           ||||||||||||||    
T  35884286 ataattttcattggttaaaaattatagagaaaataaaaagaagaacacatttaatgcaatttgcatttaatttta-----------atgatttgtttgaa 35884198  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  35884197 aaaatataataatagcataaaagttggtcttttttgcttatattttaagataaagaatatgaga 35884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 18913430 - 18913582
Alignment:
Q  10 ataattctca-ttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttga 108  Q
    |||||||||| || ||||||||| |||||||| |||||||| |||||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  18913430 ataattctcaattagttaaaaatcatggagaacataaaaagaagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttga 18913529  T
Q  109 aaaaacataataatagcataaaagttggtcttttttgcttatattttgagaca 161  Q
    ||||||||||  ||||||| ||| ||||| |||||||||||||||||||||||    
T  18913530 aaaaacataaagatagcatcaaaattggtattttttgcttatattttgagaca 18913582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 36384001 - 36383850
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgttt-gaaa 110  Q
    |||| ||||||| |||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || | ||||||||||| ||| ||||    
T  36384001 aattatcattggctaattattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaatttta-ctttggaaagatgatttttttagaaa 36383903  T
Q  111 aaacataataatagcataaaagttggtcttttttgcttatattttgagacaaa 163  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  36383902 aaacataataataacataaaagttgatcttttttgcttatattttgtgacaaa 36383850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 44056385 - 44056540
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaa 111  Q
    ||||||||||||||||  |||||||||||||||| |||||||  |||| |||||||| |||||||||||||||   |  ||||||||  || ||||||||    
T  44056385 aattctcattggttaatgattatggagaaaataagaaggagagaaaatggaatgcaaattgcatttaattttactctgaaaaagatgggttttttgaaaa 44056484  T
Q  112 aacataataatagcataaaagttg-gtcttttttgcttatattttgagacaaagaa 166  Q
    |||||| ||||||||  ||| |||  | |||||||||||||||||| |||||||||    
T  44056485 aacatattaatagcaggaaaattgatttttttttgcttatattttgggacaaagaa 44056540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 16661569 - 16661431
Alignment:
Q  36 gagaaaat-aaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaag 132  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||  |||  ||||||| |||| ||||| ||||||||||  ||||  |||| ||    
T  16661569 gagaaaatgaaaaaagagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt-tttgataaaacataattaaatatgataacag 16661471  T
Q  133 ttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||||||||||||| |||| || |||||| |||||    
T  16661470 ttggtcttttttgcttataatttgggataaagaaaatgag 16661431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 7397765 - 7397624
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| ||||  ||| ||||||||||||| |||||||||||||||   || |||||||| |||| ||||||||||| ||||  ||||  ||    
T  7397765 attatagagaaaatgaaaaaaagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaac-taattaaatatgat 7397668  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||| | |||||||||||||| |||| ||||||||| ||||    
T  7397667 aaaagttaggcttttttgcttataatttgggacaaagaaaatga 7397624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 15912251 - 15912116
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagt 133  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||||   || ||||| ||||||| ||||||| ||||||||  ||||  ||||||||    
T  15912251 gagaaaatgaaaaggagagcaaattgaatgcagtttgcatttaatttttctttggaaaaaatgattt-tttgaaataacataattaaatatgataaaagt 15912153  T
Q  134 tggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||   |||||| |||||| ||||  ||||||||||||||    
T  15912152 tg--tttttttccttataatttggaacaaagaatatgag 15912116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 25185406 - 25185492
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacata 117  Q
    ||||| |||||||| |||| |||||||||||||||||| |||||||||||||||   || |||||||| |||| ||||||||||||||    
T  25185406 attatagagaaaatgaaaaagagaacaaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaaaaacata 25185492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 41063820 - 41063657
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| ||||||||||    |||| |||||||| |||  |||||||||||||||||| |||||||||||||||   ||  ||||||| |||| ||||||    
T  41063820 ataattttcattggttatttgttattgagaaaatcaaagagagaacaaattgaatgcactttgcatttaatttttctttgaaaaagataattt-tttgaa 41063722  T
Q  110 aaaacataat--aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    | || |||||  || |  ||||||||||||||||||| |||||| |||| |||||| || |||||    
T  41063721 acaatataattaaaaatgataaaagttggtctttttttcttataatttgggacaaataaaatgag 41063657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 44510321 - 44510411
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataa 121  Q
    ||||| |||||||| ||||||||| ||||||||||||| |||||||||||||||   || |||||| | |||| ||||||||||||| ||||    
T  44510321 attatagagaaaatgaaaaggagagcaaattgaatgcactttgcatttaattttcctttggaaaaggtaattt-tttgaaaaaacatgataa 44510411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 172
Target Start/End: Original strand, 5858474 - 5858617
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcata 128  Q
    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||   ||  ||||||| |||| ||||||| ||||||||  ||||  |||    
T  5858474 ttattgagaaaatgaaacagagagcaaattgaatgcactttgcatttaattttcctttgaaaaagataattt-tttgaaacaacataattaaatatgata 5858572  T
Q  129 aaagttggtc-ttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||| ||| ||||||||||||| |||| || |||||| |||||    
T  5858573 aaagtttgtctttttttgcttataatttgggataaagaaaatgag 5858617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 13351739 - 13351686
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  13351739 attatagagaaaatgaaaaggagaacaaattgaatgcactttgcatttagtttt 13351686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 44149044 - 44149097
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  44149044 aatagaataaaagtttgtcttttttgcttatattttgggacaaagaaaatgaga 44149097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 7468165 - 7468217
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  7468165 aataggataaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 7468217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 28016956 - 28017008
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  28016956 aataggataaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 28017008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 43667487 - 43667527
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  43667487 ataaaagtttgtcttttttgcttatattttgagacaaagaa 43667527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 51339032 - 51339142
Alignment:
Q  62 aatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatattttgaga 159  Q
    ||||||| |||||||||||||    || ||||||||||||| |||||||||| |||||  ||||  ||||||||| ||||||||| |||||| |||| ||    
T  51339032 aatgcaaattgcatttaatttctctttggaaaagatgattt-tttgaaaaaatataattaaatataataaaagttagtcttttttacttataatttgcga 51339130  T
Q  160 caaagaatatga 171  Q
    ||||||| ||||    
T  51339131 caaagaaaatga 51339142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 35366330 - 35366447
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatat 152  Q
    ||||||||||||| |||| ||||||||||   || ||||| || |||| ||||||| ||||||||  ||||  |||||||||| |||||||||||||||     
T  35366330 caaattgaatgcactttgaatttaatttttctttggaaaatataattt-tttgaaacaacataattaaatatgataaaagttgatcttttttgcttataa 35366428  T
Q  153 tttgagacaaagaatatga 171  Q
    |||  ||||||||| ||||    
T  35366429 ttttggacaaagaaaatga 35366447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 6786780 - 6786734
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  6786780 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 6786734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 298879 - 298931
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| |||||| || |||||||||||||| |||||||||||||||| |||||    
T  298879 aataggataaaactttgtcttttttgcttacattttgagacaaagaaaatgag 298931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 6785405 - 6785353
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| |||||||||  |||||||||||||||||||| ||||||||| |||||    
T  6785405 aataggataaaagtttatcttttttgcttatattttgtgacaaagaaaatgag 6785353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 6787203 - 6787255
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||||||||||||||||| || |||||| |||||    
T  6787203 aataggataaaagtttgtcttttttgcttatattttgggataaagaaaatgag 6787255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 12449154 - 12449194
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  12449154 ataaaagtttgtcttttttgcttatattttgggacaaagaa 12449194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 32624193 - 32624233
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  32624193 ataaaagtttgtcttttttgcttatattttgggacaaagaa 32624233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 39555773 - 39555813
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  39555773 ataaaagtttgtcttttttgcttatattttgggacaaagaa 39555813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 51840630 - 51840740
Alignment:
Q  62 aatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatattttgaga 159  Q
    ||||||| |||||||||||||    || ||||||||||||| |||||||||| |||||  ||||  ||||||||| ||||||||| |||||| |||  ||    
T  51840630 aatgcaaattgcatttaatttctctttggaaaagatgattt-tttgaaaaaatataattaaatataataaaagttagtcttttttacttataatttacga 51840728  T
Q  160 caaagaatatga 171  Q
    ||||||| ||||    
T  51840729 caaagaaaatga 51840740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 15959858 - 15959904
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||| || ||||||||||||||||||||| ||||||||| |||||    
T  15959858 ataaaaatttgtcttttttgcttatattttgggacaaagaaaatgag 15959904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 172
Target Start/End: Original strand, 34102095 - 34102216
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgct 147  Q
    |||| |||||||| |||| |||||||||||||||   ||  |||||||||||  ||||||| ||||||||  ||||  ||||||||| |||||||||| |    
T  34102095 gagagcaaattga-tgcactttgcatttaattttcctttgaaaaagatgatt--tttgaaataacataattaaatatgataaaagtttgtcttttttgtt 34102191  T
Q  148 tatattttgagacaaagaatatgag 172  Q
    |||| ||||| ||| |||| |||||    
T  34102192 tataatttgatacagagaaaatgag 34102216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 45840167 - 45840220
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| || ||||| |||| |||| ||||||||||||| |||||||||||||||    
T  45840167 attatagaaaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 45840220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 4672848 - 4672796
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| |||||| ||  |||||||||||||||||||| ||||||||| |||||    
T  4672848 aataggataaaaatttatcttttttgcttatattttgggacaaagaaaatgag 4672796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 37735485 - 37735537
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattt 82  Q
    ||||||||||||||  ||| ||||  |||||||||| ||||||||||||||||    
T  37735485 attatggagaaaatggaaaagagagaaaattgaatgtaatttgcatttaattt 37735537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 2e-80; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 35260135 - 35259972
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  35260135 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatggaatttgcatttaattttacattggaaaagatgatttgtttgaa 35260036  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35260035 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 35259972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 27621208 - 27621045
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  27621208 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 27621109  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  27621108 aaaacataataatagcataaaagtttgtcttttttgcttatatattgagacaaagaatatgaga 27621045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 24612563 - 24612726
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||  |||||||||||||||||||    
T  24612563 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaa 24612662  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24612663 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaaaatgaga 24612726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 37598148 - 37597985
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  37598148 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaa 37598049  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37598048 aaaacataataacaacataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 37597985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 11044135 - 11043972
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||||| ||||||    
T  11044135 ataattctcattggttaaaaattatggagaaaacaaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaatatgatttatttgaa 11044036  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11044035 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaaaatgaga 11043972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 27752664 - 27752503
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  27752664 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 27752565  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  27752564 aaaacataaaaatagcataaaagttggtcttttttgtttatattttgagacaaagaaaatga 27752503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 3100031 - 3099867
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  3100031 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 3099932  T
Q  110 -aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
     ||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||    
T  3099931 aaaaacataataatagcataaaagattgtcttttttgcttatattttgaaacaaagaaaatgaga 3099867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 35344445 - 35344281
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagatt-agaaaagatgatttgtttga 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| | |||| |||||||||||||    
T  35344445 ataattctcattggttaaaaattatggagaaaataaaaaggagaatacattgaatgcaatttgcatttaattttacattgaaaaaaaatgatttgtttga 35344346  T
Q  109 aaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35344345 aaaaacataataatagcataaaaattggtcttttttgcttatattttgagacaaagaatatgaga 35344281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 44052699 - 44052535
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  44052699 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 44052600  T
Q  110 -aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
     |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  44052599 aaaaacataataataacataaaagttggttttttttgcttatattttgagataaagaaaatgaga 44052535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 44411292 - 44411456
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  44411292 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaa 44411391  T
Q  110 aaaacataataatagcataaaagttggtc-ttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  44411392 aaaatataataatagcataaaagttggtctttttttgcttatattttgagaaaaagaatatgaga 44411456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 36538136 - 36537973
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  36538136 ataattctcattggttaaaaatcatggagaaaataaaaaggagaataaattaaatgcaaattgcatttaattttacattggaaaagatgatttgtttgaa 36538037  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  36538036 aaaacataaaaatagcataaaagtttgtcttttttgcttatattttgagacaaagaaaatgaga 36537973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 166
Target Start/End: Original strand, 25321669 - 25321825
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||| |||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  25321669 ataattttcataggttaaaaattatggagaaaataaaaaggagagcaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 25321768  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25321769 aaaacataaaaatagcataaaagttggtcttttttgcttatattttgagacaaagaa 25321825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 35346387 - 35346550
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||| ||||||| |||  |||||||||||||||||||    
T  35346387 ataattctcattggttaaaaattatggagataataaaaaggagaatacattgaatgcaatttgcattcaattttacattgaaaaagatgatttgtttgaa 35346486  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  35346487 aaaacataataatagcataaaagttgatcttttttatttatattttgagacaaagaatatgaga 35346550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 11992806 - 11992644
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  11992806 ataattctcattggttaaaaattatggagaaaagaaaaaggtgaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 11992707  T
Q  110 -aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
     |||||||||||||||||||||||| ||| ||||||||||||||||| | |||||||||||||    
T  11992706 aaaaacataataatagcataaaagtaggttttttttgcttatattttaatacaaagaatatga 11992644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 39187311 - 39187149
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  39187311 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaatgatgatttgtttgaa 39187212  T
Q  110 aaaacataataatagcataaaag-ttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||||||||||  |||||||||||    
T  39187211 aaaacataataatagcataaaagtttgtttttttttgcttatattttgagac--agaatatgaga 39187149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 33851106 - 33851269
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  33851106 ataattctcattagttaaaaatcatggagaaaataaaaaggaaaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 33851205  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| ||||||    
T  33851206 aaaacataaaaatagcataaaagttgatcttttttgcttatattttgaggcaaagaaaatgaga 33851269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 32678592 - 32678753
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  32678592 ataattctcattggttaaaaattatggagaaaataaaaagaagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 32678691  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||| | |||||||| ||||    
T  32678692 aaaacataataataacataaaagtttatcttttttgcttatattttaaaacaaagaaaatga 32678753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 44358574 - 44358716
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  44358574 ataattctcattaattaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 44358673  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatat 152  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||    
T  44358674 aaaacgtaataataacataaaagttgatcttttttgcttatat 44358716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 10 - 144
Target Start/End: Original strand, 37567514 - 37567648
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  37567514 ataattctcattgattaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtctgaa 37567613  T
Q  110 aaaacataataatagcataaaagttggtctttttt 144  Q
    |||||||||||||||||||||||||||| ||||||    
T  37567614 aaaacataataatagcataaaagttggtatttttt 37567648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 12108240 - 12108084
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacat 116  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||||||||| ||    
T  12108240 tcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcattgaattttacatt-gaaaaaatgatttgtttgaaaaaatat 12108142  T
Q  117 aataatagcataaaagttgg-tcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||| ||||||||||||| | ||||||||||||||||||||| ||| |||||||||    
T  12108141 aataatggcataaaagttggtttttttttgcttatattttgagataaaaaatatgaga 12108084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 31133112 - 31133219
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  31133112 ataattctcattggttaaaaattatggagaaaataaaaaggagaaaaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 31133211  T
Q  110 aaaacata 117  Q
    ||||||||    
T  31133212 aaaacata 31133219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 34713606 - 34713511
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  34713606 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtt 34713511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 16635620 - 16635490
Alignment:
Q  43 taaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa-aaaacataataatagcataaaagttggtcttt 141  Q
    ||||||||| ||||| ||||||| |||||| ||| |||||||  || ||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  16635620 taaaaaggaaaacaacttgaatgaaatttgaattaaattttacttttgaaaagatgattt-tttgaagaaaacatagtaatagcataaaagttggtcttt 16635522  T
Q  142 tttgcttatattttgagacaaagaatatgaga 173  Q
     || ||||||||||  ||||||||| ||||||    
T  16635521 cttacttatattttaggacaaagaaaatgaga 16635490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 17314887 - 17314744
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| ||||||||| ||||||||||||| |||| ||||||||||   ||||||||||| | || ||||||||||||||||  ||||  ||    
T  17314887 attatagagaaaatgaaaaggagagcaaattgaatgcactttggatttaattttcttttagaaaagataagtt-tttgaaaaaacataattaaatatgat 17314789  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||||| ||||||||||||||| ||||  |||||||| |||||    
T  17314788 aaaagttgatcttttttgcttataatttggaacaaagaaaatgag 17314744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 16635488 - 16635354
Alignment:
Q  43 taaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-----aaaaaacataataatagcataaaagttggt 137  Q
    ||||||||| ||||| |||||||||||||| ||| |||||||  || ||||||||||||| ||||     |||||||||| |||||||||||||||||||    
T  16635488 taaaaaggaaaacaacttgaatgcaatttgaattaaattttacttttgaaaagatgattt-tttgaagaaaaaaaacatagtaatagcataaaagttggt 16635390  T
Q  138 cttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| || ||||||||||  ||||||||| ||||||    
T  16635389 ctttcttacttatattttaggacaaagaaaatgaga 16635354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 31133765 - 31133828
Alignment:
Q  108 aaaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31133765 aaaaaacataacaatagcataaaagttggtctttttttcttatattttgagacaaagaatatga 31133828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 2238685 - 2238828
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataa 118  Q
    ||||||||| ||| ||||||  |||| ||||||||||||||||||||| |||||||||||||||||  || ||||||||||||| ||||||| |||| |     
T  2238685 attggttaataatcatggagtgaatagaaaggagaacaaattgaatgcgatttgcatttaattttactttggaaaagatgatttttttgaaataacacag 2238784  T
Q  119 taatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
               ||||||||||||||||||||||||||  ||||||||| ||||||    
T  2238785 -----------aagttggtcttttttgcttatattttaggacaaagaaaatgaga 2238828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 8673438 - 8673302
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataatagcataa 129  Q
    ||||| |||||||| |||| |||| ||||||||||| | |||||||||||||||   || |||||||| |||| ||| |||| ||  || ||||  ||||    
T  8673438 attatagagaaaatgaaaaagagagcaaattgaatgtactttgcatttaattttcctttggaaaagataatttttttaaaaacactaaaaaatatgataa 8673339  T
Q  130 aagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||||||||||||||| |||| |||||||||    
T  8673338 aagttggtcttttttgcttataatttgggacaaagaa 8673302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 16635756 - 16635622
Alignment:
Q  43 taaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa-----aaaacataataatagcataaaagttggt 137  Q
    ||||||||| ||||| |||||||||||||| ||| |||||||  || ||||||||||||| ||||||     |||||||| |||||||||||||||||||    
T  16635756 taaaaaggaaaacaacttgaatgcaatttgaattaaattttacttttgaaaagatgattt-tttgaagataaaaaacatagtaatagcataaaagttggt 16635658  T
Q  138 cttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| || ||||||||||  |||||| || ||||||    
T  16635657 ctttcttacttatattttaggacaaataaaatgaga 16635622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 40487794 - 40487870
Alignment:
Q  56 aaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataatagcataaaagt 133  Q
    ||||||||||||| ||||||| ||||||| ||| |||||||||||||||||| |||||||||||||||||| ||||||    
T  40487794 aaattgaatgcaacttgcattgaattttacattggaaaagatgatttgtttg-aaaaacataataatagcaaaaaagt 40487870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 24510787 - 24510886
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataa 118  Q
    |||||||||  |||||||| | ||||||||| ||||||||||||||||||||||||||||||  ||  || ||||| ||||||| ||||||| |||||||    
T  24510787 attggttaatgattatggatagaataaaaagtagaacaaattgaatgcaatttgcatttaatactactttggaaaaaatgatttttttgaaataacataa 24510886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 41426408 - 41426325
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgattt 102  Q
    |||||||||  |||||||||| |||| |||||| ||||||||||||||||||||||||||||||||  ||  ||||||||||||    
T  41426408 attggttaatgattatggagataatagaaaggataacaaattgaatgcaatttgcatttaattttactttgaaaaagatgattt 41426325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 173
Target Start/End: Complemental strand, 16643457 - 16643296
Alignment:
Q  14 ttctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtt--tgaaaa 111  Q
    ||||||||||| ||  |||||||||||||||||||||| || || ||||||| ||||||||||||||||||  ||  ||||| |||||| ||   |||||    
T  16643457 ttctcattggtcaatgattatggagaaaataaaaaggaaaataacttgaatgtaatttgcatttaattttacttttaaaaagttgattttttgaagaaaa 16643358  T
Q  112 aacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    || ||| ||||| ||| ||||||||| ||| |   |||||||||  ||||||||| ||||||    
T  16643357 aaaatagtaataccatgaaagttggtatttctcatttatattttaggacaaagaaaatgaga 16643296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 17336799 - 17336713
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacata 117  Q
    ||||| ||| |||| ||||||||| ||||||||||||| |||||||||||||||   ||||||||||| |||| ||||||||||||||    
T  17336799 attatagagtaaatgaaaaggagagcaaattgaatgcactttgcatttaattttcctttagaaaagataattt-tttgaaaaaacata 17336713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 41791563 - 41791699
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||| |||||||||||   || ||||||||||||| |||||||||| |||||  ||||  ||    
T  41791563 attatagagaaaataaaaaagagagcaaattgaatgcattttacatttaattttcttttggaaaagatgattt-tttgaaaaaagataattaaatatgat 41791661  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||| || | ||||||||||| |||  |||||||||    
T  41791662 aaaagtt-gtttgttttgcttataatttaggacaaagaa 41791699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 34899979 - 34899894
Alignment:
Q  33 atggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat 119  Q
    ||||||||| || |||| | ||||||||||||| |||| |||||||||||||  |||||||||||||||| ||||||| ||||||||    
T  34899979 atggagaaagtataaagaaaaacaaattgaatgaaattagcatttaattttactttagaaaagatgattt-tttgaaataacataat 34899894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 17713252 - 17713137
Alignment:
Q  58 attgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatatttt 155  Q
    |||||||||| |||||||||||||||   || |||||||| ||||||| |||| || |||||  ||||  ||||||||||||||||||| |||||| |||    
T  17713252 attgaatgcactttgcatttaattttcctttggaaaagataatttgtt-gaaacaatataattaaatatgataaaagttggtcttttttacttataattt 17713154  T
Q  156 gagacaaagaatatgag 172  Q
    | ||||||||| |||||    
T  17713153 gggacaaagaaaatgag 17713137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 13144174 - 13144226
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  13144174 aataggataaaagtttgtcttttttgcttatattttgagacaaagaaaatgag 13144226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 5217419 - 5217306
Alignment:
Q  60 tgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatattttga 157  Q
    ||||||||| |||||||||||||    || | ||||||||| | ||||||||||||||||  ||||  |||||||||||||||||||||||||| ||||     
T  5217419 tgaatgcaaattgcatttaatttctccttgggaaagatgatgt-tttgaaaaaacataattaaatatgataaaagttggtcttttttgcttataatttgg 5217321  T
Q  158 gacaaagaatatgag 172  Q
     |||||||| |||||    
T  5217320 tacaaagaaaatgag 5217306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 16635871 - 16635786
Alignment:
Q  59 ttgaatgcaatttgcatttaatttt-agattagaaaagatgatttgtttgaaa--aaacataataatagcataaaagttggtcttt 141  Q
    ||||||| ||||||||||||||||| |  || ||||||||||||| |||||||  ||||||| ||||||||||||| |||||||||    
T  16635871 ttgaatgaaatttgcatttaatttttacttttgaaaagatgatttttttgaaagaaaacatagtaatagcataaaaattggtcttt 16635786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 25195149 - 25195277
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||   || |||||||| | || ||||||||||||||||  ||||  ||    
T  25195149 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttttctttggaaaagataagtt-tttgaaaaaacataattaaatatgat 25195247  T
Q  128 aaaagttggtc-ttttttgcttatattttg 156  Q
    | ||||||| | ||||||||||||| ||||    
T  25195248 agaagttggcctttttttgcttataatttg 25195277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 16643284 - 16643195
Alignment:
Q  53 aacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgttt-gaaaaaacataataatagcataaaagttggtcttt 141  Q
    ||||| ||||||  ||||||||||| ||||||  || |||||||||||||||||  ||||||||||||||||  |||||||||| |||||    
T  16643284 aacaacttgaatataatttgcattttattttacttttgaaaagatgatttgtttaaaaaaaacataataataagataaaagttgatcttt 16643195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 4047107 - 4047159
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  4047107 aatagaataaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 4047159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 27819715 - 27819585
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcata 128  Q
    |||| |||||||||||| ||||| |||||| |||| | |||||||||||||||   ||  |||||||||||| ||||||| |||| |||  ||||  |||    
T  27819715 ttatagagaaaataaaagggagagcaaattaaatgtagtttgcatttaattttcctttgaaaaagatgattt-tttgaaataacaaaattaaatatgata 27819617  T
Q  129 aaagttggtcttttttgcttatattttgagac 160  Q
    ||||||  ||||||||||||||| ||| ||||    
T  27819616 aaagtttatcttttttgcttataatttaagac 27819585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 28497641 - 28497750
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatat 152  Q
    ||||||||||||| | |||||||||||||   || |||||||| |||| ||||||| ||||||||  ||||  |||||||||||| | |||||||||||     
T  28497641 caaattgaatgcactatgcatttaattttcctttggaaaagataattt-tttgaaataacataattaaatatgataaaagttggtatattttgcttataa 28497739  T
Q  153 tttgagacaaa 163  Q
    |||| ||||||    
T  28497740 tttgggacaaa 28497750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 41809016 - 41809059
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaa 163  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||    
T  41809016 aatagaataaaagtttgtcttttttgcttatattttgagacaaa 41809059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 26954520 - 26954632
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataa--tagcataaaagttggtcttttttgcttatat 152  Q
    |||| |||||||| |||||||||||||||   || |||||||| |||| ||||||| |||||| |||  ||  |||||| |||||||||||| ||||||     
T  26954520 caaaatgaatgcactttgcatttaattttcttttggaaaagataattt-tttgaaacaacatagtaaaatatgataaaatttggtcttttttacttataa 26954618  T
Q  153 tttgagacaaagaa 166  Q
    |||| |||||||||    
T  26954619 tttgggacaaagaa 26954632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 34890393 - 34890439
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  34890393 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 34890439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 41362410 - 41362498
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| |||| | || |||||| |||||| |||||||||||||||   || |||||||| |||| ||||||||||||||||    
T  41362410 attatagagaaaatgaaaaagtgagcaaattaaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataat 41362498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 7022591 - 7022631
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  7022591 ataaaagtttgtcttttttgcttatattttgggacaaagaa 7022631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 7858500 - 7858460
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  7858500 ataaaagtttgtcttttttgcttatattttgggacaaagaa 7858460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 24892785 - 24892733
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| |||||||||||||||||||||  |||||||| |||||    
T  24892785 aataggataaaagtttgtcttttttgcttatattttggaacaaagaaaatgag 24892733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 35525545 - 35525493
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  35525545 aataggataaaagtttgtcttttttacttatattttgggacaaagaaaatgag 35525493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 36190718 - 36190666
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||  ||||||||||||||||||||| ||||||||| |||||    
T  36190718 aataggataaaagtgtgtcttttttgcttatattttgggacaaagaaaatgag 36190666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 38072157 - 38072117
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  38072157 ataaaagttggtcttttttgcttataatttgggacaaagaa 38072117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 41362846 - 41362885
Alignment:
Q  127 taaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  41362846 taaaagttggtcttttttgcttataatttgggacaaagaa 41362885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 13143705 - 13143659
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||||||  |||||||||||||||||||| ||||||||| |||||    
T  13143705 ataaaagtttatcttttttgcttatattttgggacaaagaaaatgag 13143659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 30576040 - 30576086
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||| |||||| || ||||||||||||||||||||| |||||||||    
T  30576040 aataggataaaaatttgtcttttttgcttatattttgggacaaagaa 30576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 4038984 - 4039037
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||| |||||||||||    
T  4038984 attatagagaaaatgaaaaagagagcaaattgaatgcactttacatttaatttt 4039037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 29147340 - 29147393
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| ||| ||||| |||||| |||||| |||||||||||||||    
T  29147340 attatagagaaaatgaaatggagatcaaattaaatgcagtttgcatttaatttt 29147393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 36190828 - 36190775
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||  ||||  |||||||||| ||||||||||||||||||    
T  36190828 ttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaatttta 36190775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 40486575 - 40486628
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaa 63  Q
    |||||| | ||| ||||||||||| ||||||||||||||| |||| ||||||||    
T  40486575 ataatttttattagttaaaaattaaggagaaaataaaaagaagaataaattgaa 40486628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 14576249 - 14576301
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||    
T  14576249 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 14576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 2e-80; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 53677527 - 53677690
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  53677527 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 53677626  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53677627 aaaacataataatagcataaaagttggttttttttgcttatattttgagacaaagaatatgaga 53677690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 39970037 - 39970200
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||    
T  39970037 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttggttgaa 39970136  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  39970137 aaaacataataatagcataaaaattagtcttttttgcttatattttgagacaaagaatatgaga 39970200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 3043215 - 3043376
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  3043215 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 3043314  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  3043315 aaaacataataatagcataaaagttgatctttttcgcttatattttgagacaaagaatatga 3043376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 29180460 - 29180623
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||||    
T  29180460 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaa 29180559  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29180560 aaaacataataataacataaaagtttgtcttttttgcttatattttgagacaaagaatatgaga 29180623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 30776532 - 30776695
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||||    
T  30776532 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaa 30776631  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30776632 aaaacataataataacataaaagttggtcttttttgcttatattttgagacaaataatatgaga 30776695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 30777559 - 30777396
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||||    
T  30777559 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaa 30777460  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30777459 aaaacataataataacataaaagttggtcttttttgcttatattttgagacaaataatatgaga 30777396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 49902099 - 49901935
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  49902099 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaa 49902000  T
Q  110 aaaacataataatagcataaaag-ttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| |||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  49901999 aaaacataataataacataaaagtttgtttttttttgcttatattttgagacaaagaatatgaga 49901935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 32012375 - 32012538
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  32012375 ataattctcattggttaaaaattatagagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaa 32012474  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  32012475 aaaacataataatagcataaaagtttgtcttttttgcttatattttgagacaaagaaaatgaga 32012538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 43980570 - 43980407
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  43980570 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 43980471  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||    
T  43980470 aaaatataataatagcataaaagttggtattttttacttatattttaagacaaagaatatgaga 43980407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 50768517 - 50768354
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  50768517 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 50768418  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50768417 aaaacataaaaatagcataaaagttggtcttttttgcttatattttgagacaaagaaaatgaga 50768354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 52713135 - 52712972
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  52713135 ataattcttattggttgaaaattatggagaaaataaaaaggagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 52713036  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  52713035 aaaacataataatagcataaaaattggtcttttttacttatattttgagacaaagaatatgaga 52712972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 1620101 - 1619938
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||  |||||||||||||||||||    
T  1620101 ataattctcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaaattgcatttaattttacattgaaaaagatgatttgtttgaa 1620002  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| ||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  1620001 aaaatataataatagcataaaagttggtgttttatgattatattttgagacaaagaatatgaga 1619938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 9798123 - 9798286
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  9798123 ataattctcattgattacaaattatggagaaaataaaaaggagaacacattgaatccaatttgcatttaattttacattggaaaagatgatttgtttgaa 9798222  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  9798223 aaaacataataatagcataaaagttgatcttttttgcttatattttaagataaagaatatgaga 9798286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 10591551 - 10591713
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  10591551 ataattctcattggttaaaaattatggaaaaaataaaaaggagaaccaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 10591650  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||| || ||||||||| |||||||||||||||||| |||||||||    
T  10591651 aaaacataataatagcataaaaattagtctttttt-cttatattttgagacaaaaaatatgaga 10591713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 37788523 - 37788362
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  37788523 ataattctcattggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaagttgcatttaattttacattggaaaagatgatttgtttgaa 37788424  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||| ||||    
T  37788423 aaaacataaaaatagcataaaagttggtcttttttacttatattttgagataaagaaaatga 37788362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 38940941 - 38940780
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||| ||||||||| |||| ||||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  38940941 ataattctcattgattaaaaattttggaaaaaataaaaagaagaataaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 38940842  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  38940841 aaaacataataatagcataaaagttggtattttttgcttatattttgagacaaagaaaatga 38940780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 55937751 - 55937914
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| ||||||||||||||| ||| ||||||||||||||||||||    
T  55937751 ataattctcattggttaaaaattatggagaagataaaaaggagaacaaattaaatacaacttgcatttaattttacattggaaaagatgatttgtttgaa 55937850  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  55937851 aaaacataaaaatatcataaaagttggtcttttttgcttatattttaagacaaagaaaatgaga 55937914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 38187774 - 38187937
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  38187774 ataattctcatttgttaaaaattatggagaaaataaaaaagagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 38187873  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    || ||||| ||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||    
T  38187874 aatacatactaatagcataaaagttgatcttttttacttatattttgagataaagaaaatgaga 38187937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 29899787 - 29899624
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  29899787 ataattctcattggttaaaaatcatgaagaaaataaaaaggtgaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 29899688  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| || ||||||    
T  29899687 aaaacataaaaatagcataaaagttggtcttttttgcttatatgttgaaacaaacaaaatgaga 29899624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 51495218 - 51495079
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  51495218 attctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttaaaaaa 51495119  T
Q  113 acataataatagcataaaagttggtcttttttgcttatatttt 155  Q
    ||||   |||||||||||||||| |||||||||||||||||||    
T  51495118 acat---aatagcataaaagttgatcttttttgcttatatttt 51495079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 27750409 - 27750557
Alignment:
Q  23 gttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataat 122  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||| ||||||| |||    
T  27750409 gttaaaaattatggaaaaaataaaaagaagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaataacataaaaat 27750508  T
Q  123 agcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||||||||||| || |||||||||||||||| |||||| ||||    
T  27750509 agcataaaagttggtctgttatgcttatattttgagataaagaaaatga 27750557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 47807267 - 47807157
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  47807267 ataattctcgttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttctttgaa 47807168  T
Q  110 aaaacataata 120  Q
    |||||||||||    
T  47807167 aaaacataata 47807157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 30012004 - 30012157
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg--aa 109  Q
    |||| |||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||  || |||| |||||||| |||   ||    
T  30012004 aattatcattggttaattattatggagaaaataaaaa--agaacaaattgaatgcaatttgcatttaattttactttggaaa-gatgattttttttttaa 30012100  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  30012101 aaaacataataatagaataaaagttgatcttttttgcttatattttgggacaaagaa 30012157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 5222370 - 5222509
Alignment:
Q  39 aaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-----aaaaaacataataatagcataaaagt 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  || ||||| ||||||| |||      ||||||||||||||||| ||||||||    
T  5222370 aaaataaaaaggagaacaaattcaatgcaatttgcatttaattttactttggaaaaaatgattttttttttttaaaaaaacataataatagtataaaagt 5222469  T
Q  134 tggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||| ||||||||||  ||||||||| ||||||    
T  5222470 tggtcttttttacttatattttaggacaaagaaaatgaga 5222509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 5234059 - 5234179
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatga-tttgtttgaaaaaacata 117  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||| ||||||| | ||| ||||||||||||||    
T  5234059 attggttaattattatggagaaaataaaaaggagaataaattgaatgcaatttacatttaattttatttta-aaaagataattttttttgaaaaaacata 5234157  T
Q  118 ataatagcataaaagttggtct 139  Q
    ||||||||||||||||| ||||    
T  5234158 ataatagcataaaagtttgtct 5234179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 23978210 - 23978353
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||   || |||||||| |||| ||||||||||||||||  ||||  ||    
T  23978210 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaaaaacataattaaatatgat 23978308  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||||||||||||| ||||||| |||| || |||||| |||||    
T  23978309 aaaagttggtctttttcgcttataatttgggataaagaaaatgag 23978353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 37911941 - 37911798
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| ||||||||||||| |||| |||||| |||||| |||||||||||||||   || |||||||| || | ||||||||||||||||  ||||  ||    
T  37911941 attatagagaaaataaaaaagagagcaaattcaatgcactttgcatttaattttcctttggaaaagataatat-tttgaaaaaacataattaaatatgat 37911843  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||| || ||||||||| |||||| |||| ||||||||| |||||    
T  37911842 aaaatttagtcttttttacttataatttgggacaaagaaaatgag 37911798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 8013190 - 8013327
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagt 133  Q
    |||||||| |||  ||||||| | ||||||||| ||||||||||||||   || |||||||| |||| |||||||||| |||||  ||||  ||||||||    
T  8013190 gagaaaatgaaagagagaacataatgaatgcaaattgcatttaatttttacttggaaaagataattt-tttgaaaaaatataattaaatatgataaaagt 8013288  T
Q  134 tggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||||| |||||| |||| ||||||||| |||||    
T  8013289 tggtcttttttacttataatttgggacaaagaaaatgag 8013327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 8178335 - 8178475
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcata 128  Q
    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||   |||||||| || |||| ||||||| || |||||  ||||  |||    
T  8178335 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaattttcttttagaaaatataattt-tttgaaacaatataattaaatatgata 8178433  T
Q  129 aaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||||||||| |||||| |||||||||||||| ||||    
T  8178434 aaagttggtctttttt-cttataatttgagacaaagaaaatga 8178475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 47806861 - 47806809
Alignment:
Q  119 taatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  47806861 taatagcataaaaattgatcttttttgcttatattttgagacaaagaatatga 47806809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 40553839 - 40553684
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacat 116  Q
    ||||||||||  | ||||||||||| | |||||||||  ||| |||||||||||||||||||||||    || ||||||||||||| ||| ||| |||||    
T  40553839 tcattggttattagttatggagaaagtgaaaaggagagtaaaatgaatgcaatttgcatttaatttctctttggaaaagatgattt-ttttaaataacat 40553741  T
Q  117 aat--aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||  ||||  ||||| ||||||| ||||||| |||| |||| ||||||||| |||||    
T  40553740 aattaaatatgataaatgttggtc-tttttgcatataatttgggacaaagaaaatgag 40553684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 155
Target Start/End: Original strand, 17236342 - 17236446
Alignment:
Q  53 aacaaattgaatgcaatttgcatttaattttagattagaaaagatga--tttgtttgaaaaaacataataatagcataaaagttggtcttttttgcttat 150  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||  ||| ||| || ||  ||||||||| ||||||| || |||| |||| |||||    
T  17236342 aacaaattgaatgcaatttgcatttaattttattttagaaaaaatgatttttttttaaataagaataataataacataaaaatttgtctattttacttat 17236441  T
Q  151 atttt 155  Q
    |||||    
T  17236442 atttt 17236446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 40411152 - 40411021
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagt 133  Q
    |||||||| |||| |||| ||||||||||||| ||| ||||||||||||  ||| ||||||| |||| ||| ||||||| ||||  ||||  ||||||||    
T  40411152 gagaaaatgaaaaagagatcaaattgaatgcagtttacatttaattttactttaaaaaagat-atttttttaaaaaaacttaattaaatatgataaaagt 40411054  T
Q  134 tggtcttttttgcttatattttgagacaaagaa 166  Q
    |||| ||||||| ||||| ||||  ||||||||    
T  40411053 tggttttttttgtttataatttggaacaaagaa 40411021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 16605040 - 16605092
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  16605040 aatagcataaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 16605092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 172
Target Start/End: Original strand, 28318538 - 28318655
Alignment:
Q  56 aaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatatt 153  Q
    |||||||||||| ||| |||||||||||   || |||||||| |||| ||||||||||||||||  ||||  ||||||||| || ||||||||||| | |    
T  28318538 aaattgaatgcattttacatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagttagttttttttgcttacaat 28318636  T
Q  154 ttgagacaaagaatatgag 172  Q
    ||| ||||||||| |||||    
T  28318637 ttgggacaaagaaaatgag 28318655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 166
Target Start/End: Original strand, 47516287 - 47516423
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcata 128  Q
    |||| |||||||| |||  |||| |||||  |||||| |||| ||||||||||   || |||||||| |||| ||||||| ||||||||  |||   |||    
T  47516287 ttattgagaaaatgaaagagagagcaaatcaaatgcactttgtatttaattttcctttggaaaagataattt-tttgaaacaacataattaaatgtaata 47516385  T
Q  129 aaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  47516386 aaagttggtcttttttgcttataatttgggacaaagaa 47516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 17186987 - 17187039
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  17186987 aataggataaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 17187039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 53848499 - 53848381
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatat 152  Q
    ||||||||||||| |||||||||| ||||   ||  |||||||||||| ||||||| || |||||  |||   ||||||||||||||||||| ||||||     
T  53848499 caaattgaatgcactttgcatttattttttctttgaaaaagatgattt-tttgaaacaatataattaaatttgataaaagttggtcttttttacttataa 53848401  T
Q  153 tttgagacaaagaatatgag 172  Q
    |||| ||||||||| |||||    
T  53848400 tttgggacaaagaagatgag 53848381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 28142717 - 28142860
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| |||||| |||||  |||||||||||||||   || |||||||| |||| ||||||||||||||||  ||||  ||    
T  28142717 attatagagaaaatgaaaaagagagcaaattaaatgct-tttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgat 28142814  T
Q  128 aaaagttggtctttt-ttgcttatattttgagacaaagaatatgag 172  Q
    |||||||| | |||| ||||||||| ||||  |||||||| |||||    
T  28142815 aaaagttgatttttttttgcttataatttggaacaaagaaaatgag 28142860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 32410386 - 32410332
Alignment:
Q  29 aattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||||| ||||||||||||| |||| |||||||||| || |||||||||||||||    
T  32410386 aattatagagaaaataaaaaagagagcaaattgaatacactttgcatttaatttt 32410332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 35310954 - 35311000
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||| |||||||||||||||||||| |||||||||| |||||    
T  35310954 ataaaagtttgtcttttttgcttatattttaagacaaagaaaatgag 35311000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 35529618 - 35529572
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  35529618 aatagaataaaagtttgtcttttttgcttatattttgggacaaagaa 35529572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 38140826 - 38140896
Alignment:
Q  49 ggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat 119  Q
    |||||||||| | |||||||||| |||||||||| |  || ||||||||||||| ||||||| ||||||||    
T  38140826 ggagaacaaactaaatgcaattttcatttaatttcattttggaaaagatgatttttttgaaataacataat 38140896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 166
Target Start/End: Original strand, 46070641 - 46070753
Alignment:
Q  56 aaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtc-ttttttgcttatat 152  Q
    |||||||||||| |||||||||||||||   || |||||||| |||| ||| ||| ||||||||  ||||  |||||| |||||| |||||||||||||     
T  46070641 aaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttcaaacaacataattaaatatgataaaaattggtctttttttgcttataa 46070739  T
Q  153 tttgagacaaagaa 166  Q
    |||| |||||||||    
T  46070740 tttgggacaaagaa 46070753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 17799230 - 17799299
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgat 100  Q
    ||||||||||||| | | |||||||||||| ||||||||||||||||| ||| |  || |||||||||||    
T  17799230 ttatggagaaaatgagagggagaacaaattaaatgcaatttgcatttagtttcactttggaaaagatgat 17799299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 55580607 - 55580562
Alignment:
Q  127 taaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||    
T  55580607 taaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 55580562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 2229219 - 2229179
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  2229219 ataaaagtttgtcttttttgcttatattttgggacaaagaa 2229179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 14332731 - 14332691
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  14332731 ataaaagtttgtcttttttgcttatattttgggacaaagaa 14332691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 26916297 - 26916257
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  26916297 ataaaagtttatcttttttgcttatattttgagacaaagaa 26916257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 39078104 - 39078052
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  39078104 aataggataaaagtttgtcttttttacttatattttgggacaaagaaaatgag 39078052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 42915470 - 42915430
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  42915470 ataaaagtttgtcttttttgcttatattttgggacaaagaa 42915430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 48793831 - 48793883
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  48793831 aatagaataaaagtttgtcttttatgcttatattttgggacaaagaaaatgag 48793883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 166
Target Start/End: Complemental strand, 49080306 - 49080175
Alignment:
Q  38 gaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagatt-agaaaagatgatttgtttgaaaaaacataat--aatagcataaaagtt 134  Q
    |||||| |||| |||| ||||||||||||| |||||||||||||||   || | |||  |  |||| ||| ||||||||||||  ||||  |||||||||    
T  49080306 gaaaatgaaaaagagatcaaattgaatgcactttgcatttaattttcctttgaaaaataacaatttttttaaaaaaacataattaaatatgataaaagtt 49080207  T
Q  135 ggtcttttttgcttatattttgagacaaagaa 166  Q
    | ||||||||||||||| |||| |||| ||||    
T  49080206 gatcttttttgcttataatttgggacagagaa 49080175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 7652121 - 7652172
Alignment:
Q  33 atggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    |||||||||||| || |||||||||||||| || ||||| ||||||||||||    
T  7652121 atggagaaaatagaatggagaacaaattgagtgaaattttcatttaatttta 7652172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 4058661 - 4058615
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||| ||||||||| ||||||||||||||||||||  |||||||||    
T  4058661 aataggataaaagtttgtcttttttgcttatattttaggacaaagaa 4058615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 4512991 - 4512954
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaa 163  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  4512991 ataaaagttggtcttttttgcttataatttgggacaaa 4512954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 5064750 - 5064803
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| |||| ||||  |||||||||||| |||||||||||||||    
T  5064750 attatagagaaaatgaaaaagagagtaaattgaatgcactttgcatttaatttt 5064803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 5841894 - 5842016
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataa--taatagcataaaagttggtcttttttgct 147  Q
    |||| |||||||| |||| |||||||| ||||||   ||||||||||| |||| ||||||| || ||||   ||||  |||||||||  |||||||| ||    
T  5841894 gagagcaaattgattgcactttgcattgaatttttctttagaaaagataattt-tttgaaacaatataactaaatatgataaaagttaatcttttttact 5841992  T
Q  148 tatattttgagacaaagaatatga 171  Q
    |||| ||| |||||||||| ||||    
T  5841993 tataattttagacaaagaaaatga 5842016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 29511440 - 29511366
Alignment:
Q  91 aaaagatgatttgtttgaaaaaacataataa-tagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||| |||| |||||||||||||||||| ||  ||||||||| || ||||||||||||| ||||| ||||||||    
T  29511440 aaaagataattt-tttgaaaaaacataataaatatgataaaagtttgtattttttgcttataatttga-acaaagaa 29511366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 41414789 - 41414829
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||| ||||||||||| |||||||||    
T  41414789 ataaaagtttgtcttttttacttatattttgggacaaagaa 41414829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 47867851 - 47867811
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||  |||||||||||||||||||| |||||||||    
T  47867851 ataaaagtttttcttttttgcttatattttgggacaaagaa 47867811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 5e-78; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 10227987 - 10227824
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||| |    
T  10227987 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgga 10227888  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10227887 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 10227824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 12278781 - 12278620
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  12278781 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacatttgaaaaaatgatttgtttgaa 12278682  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  12278681 aaaacataataataacataaaagttgatcttttttgcttatattttgagacaaagaatatga 12278620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 10 - 170
Target Start/End: Original strand, 17721891 - 17722051
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||    
T  17721891 ataattctcatttgttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaatatgatttctttgaa 17721990  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatg 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17721991 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatg 17722051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 10 - 167
Target Start/End: Complemental strand, 374174 - 374017
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||||||    
T  374174 ataattttcattggttaaaaattatagagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacatcggaaaatatgatttgtttgaa 374075  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaat 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  374074 aaaacataataatagcataaaagttggtcttttttgcttatattttgagataaagaat 374017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 30949210 - 30949054
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  30949210 ataattctcattggttaaaaattatagagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 30949111  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  30949110 aaaacataaaaatagcataaaagttagtcttttttgcttatattttgagacaaagaa 30949054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 33756331 - 33756168
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||  |||| ||||||||||||||    
T  33756331 ataattctcattggttaaaaattatggagaaaatgaaaaggaggacaaattgaatgcaatttgcatttaattttacattgaaaaaaatgatttgtttgaa 33756232  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  33756231 aaaacataataatagcataaaagttggtatttttttcttatattttgagataaagaatatgaga 33756168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 10 - 163
Target Start/End: Complemental strand, 17598368 - 17598215
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  17598368 ataattctcattggttaaaaattatggagaaaataaaaaagagaataaattgaatgcaatttgcatttaattttacattggaaaagaagatttgtttgaa 17598269  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaa 163  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  17598268 aaaacataataataacatacaagttggtcttttttgcttatattttgggacaaa 17598215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 30766521 - 30766358
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||  |||| || |||| ||||||    
T  30766521 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattcaatgcaatttgcatttaattttacattgaaaaaaataatttctttgaa 30766422  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  30766421 aaaacataataataacataaaagttgattttttttgcttatattttgagacaaagaatatgaga 30766358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 31887203 - 31887365
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-a 108  Q
    |||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||| |    
T  31887203 ataatttttattggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 31887302  T
Q  109 aaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||    
T  31887303 aaaaacataaaaatagcataaaagttggtcttttatgcttataatttgagacaaagaaaatga 31887365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 3888484 - 3888362
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||||||||||||||||| |||||||||||||||   ||  ||||||| |||| ||||||||||||||||  ||||  ||    
T  3888484 attatagagaaaatgaaaaagagaacaaattgaatgcactttgcatttaattttcctttgaaaaagataattt-tttgaaaaaacataattaaatatgat 3888386  T
Q  128 aaaagttggtcttttttgcttata 151  Q
    ||||||||||||||||||||||||    
T  3888385 aaaagttggtcttttttgcttata 3888362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 4032044 - 4031901
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||   || |||||||| |||| || |||||||||||||  ||||  ||    
T  4032044 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttccctttgaaaagataattt-ttcgaaaaaacataattaaatatgat 4031946  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
     |||||||||||||| |||||||| ||||||| |||||| |||||    
T  4031945 taaagttggtcttttatgcttataatttgagataaagaaaatgag 4031901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 5300696 - 5300836
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcata 128  Q
    |||| |||||||||||||  ||| ||||||||||||| |||| ||||||||||   || |||||||| |||| ||||||||||||||||  ||||  |||    
T  5300696 ttattgagaaaataaaaaaaagagcaaattgaatgcactttgtatttaattttcttttggaaaagataattt-tttgaaaaaacataattaaatatgata 5300794  T
Q  129 aaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||| || |||||||||||| |||| ||||||||| ||||    
T  5300795 aaagttgatc-tttttgcttataatttgggacaaagaaaatga 5300836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 32882806 - 32882925
Alignment:
Q  41 aataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtctt 140  Q
    |||| ||||||||||||||||||||| |||||||||||||||||  || |||||||||| || |||||           |||| || |||||||||||||    
T  32882806 aatagaaaggagaacaaattgaatgcgatttgcatttaattttactttggaaaagatgacttttttga-----------aataacacaaaagttggtctt 32882894  T
Q  141 ttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||||||||  ||||||||| ||||    
T  32882895 ttttgcttatattttaggacaaagaaaatga 32882925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 4988000 - 4987863
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||   ||  ||||||| |||| ||| |||||||||| |  ||||  ||    
T  4988000 attatagagaaaatgaaaatgagagcaaattgaatgcattttgcatttaattttcctttgaaaaagataattt-tttaaaaaaacatatttgaatatgat 4987902  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||| |||||||||  ||||| |||| |||||||||    
T  4987901 aaaagttagtcttttttatttataatttgggacaaagaa 4987863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 16524436 - 16524349
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat 119  Q
    ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||   || ||||| || |||| ||||||||||||||||    
T  16524436 attatagagaaaatgaaaag-agaacaaattgaatgcactttgcatttaattttcttttggaaaaaataattt-tttgaaaaaacataat 16524349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 21964009 - 21963941
Alignment:
Q  33 atggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgattt 102  Q
    |||||||||||||||| |||||||||||| ||| ||||| ||||||||||||  ||| ||||||||||||    
T  21964009 atggagaaaataaaaaagagaacaaattgtatgaaatttacatttaattttacttta-aaaagatgattt 21963941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 3095908 - 3095948
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  3095908 ataaaagtttgtcttttttgcttatattttgggacaaagaa 3095948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 21542392 - 21542352
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  21542392 ataaaagtttgtcttttttgcttatattttgggacaaagaa 21542352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 1130479 - 1130433
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||||||||| ||||||||||||| |||| ||||||||| |||||    
T  1130479 ataaaagttggttttttttgcttataatttgggacaaagaaaatgag 1130433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 5822182 - 5822266
Alignment:
Q  90 gaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||||||| ||| ||||||||||||  ||||  |||||| || |||||||||| ||||| |||| |||| |||| |||||    
T  5822182 gaaaagatgatttttttaaaaaaacataattaaatatgataaaaattagtcttttttgtttataatttgggacagagaaaatgag 5822266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 16655245 - 16655200
Alignment:
Q  37 agaaaataaaaaggagaacaaattgaatgcaatttgcatttaattt 82  Q
    ||||||| ||| ||||| |||| |||||||||||||||||||||||    
T  16655245 agaaaatgaaagggagagcaaaatgaatgcaatttgcatttaattt 16655200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 35129242 - 35129282
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||| ||||||| |||||||||    
T  35129242 ataaaagtttgtcttttttgcttgtattttgggacaaagaa 35129282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 5e-78; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 792437 - 792600
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  792437 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttctttgaa 792536  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  792537 aaaacataataataacataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 792600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 29514100 - 29514263
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  29514100 ataattttcattggttaaaaattatagagaaaataaaaatgagaacaaattgaatgcaatttgcatttaattttacattaaaaaagatgatttgtttgaa 29514199  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29514200 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 29514263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 33635411 - 33635248
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  33635411 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattagaaaagatgatttgtttgaa 33635312  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33635311 aaaacataaaaatagcataaaagttggtcttttttgcttatattttgagacaaagaaaatgaga 33635248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 21539832 - 21539669
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  21539832 ataattctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 21539733  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21539732 aaaacataataataacataaaagttggtcttttttgcttatattttgagacaaagaaaatgaga 21539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 169
Target Start/End: Original strand, 14565454 - 14565614
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-a 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||| |    
T  14565454 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttctttgaa 14565553  T
Q  109 aaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatat 169  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14565554 aaaaacataataatagcataaaagttagtcttttttgcttatattttgagacaaagaatat 14565614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 8784470 - 8784307
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  8784470 ataattcttattgattaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaa 8784371  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8784370 ataacataataatagcataaaagttggtcttttttacttatattttgagacaaagaatatgaga 8784307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 22 - 169
Target Start/End: Complemental strand, 28424337 - 28424190
Alignment:
Q  22 ggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataa 121  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  28424337 ggttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataa 28424238  T
Q  122 tagcataaaagttggtcttttttgcttatattttgagacaaagaatat 169  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  28424237 tagcataaaagttggtcttttttgcttaaattttgagacaaagaatat 28424190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 29514556 - 29514718
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| | ||||||||||||||||||    
T  29514556 ataattttcattggttaaaaattatggagaaaataaaaaggacaacaaattgaatgcaatttacatttaattttacattgggaaagatgatttgtttgaa 29514655  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29514656 aaaacataataatagcataaaagttggtctttttt-cttatattttgagacaaagaatatgaga 29514718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 38549724 - 38549887
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||    
T  38549724 ataattctcattggttaaaaattatggagaaaacaaaaatgagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttatttgaa 38549823  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  38549824 aaaacataataatagcataaaagttgatcttttttgcttatattttgagacaaagaaaatgaga 38549887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 43075825 - 43075662
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  43075825 ataattttcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaattttacattggaatagatgatttgtttgaa 43075726  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  43075725 aaaacataataatagcataaaagttggtattttttgcttatattttgacacaaaaaatatgaga 43075662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 5091621 - 5091784
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-- 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||      
T  5091621 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaa 5091720  T
Q  108 aaaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  5091721 aaaaaacataataatggcataaaagttggtcttttttacttatattttgagataaagaatatga 5091784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 35832487 - 35832328
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  35832487 ataattctcattagttaaaaattatggagaaaataaaaaggtgaacagattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaa 35832388  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatat 169  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  35832387 aaaacataataatagcataaaaatatgtcttttttgcttatattttgagacaaagaatat 35832328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 166
Target Start/End: Original strand, 4033756 - 4033912
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  |||||||| ||||||||||    
T  4033756 ataattctcgttggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaagatgttttgtttgaa 4033855  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  4033856 aaaacataataatagcataaaaattgatcttttttgcttatattttgagacaaagaa 4033912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 28492595 - 28492439
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  28492595 ataattctcattggttaaaaattatagagaaaataaaaaggagaataagttgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaa 28492496  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28492495 aaaatataataatagcataaaagttggtcttttttgcttatattttaagacaaagaa 28492439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 4092086 - 4091922
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-a 108  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||| |||  |||||||||||| |||| |    
T  4092086 ataattctcaatggttaaaaattatggaaaaaacaaaaaggagaacaaattgaatgcaacttgcatttaattttacattgaaaaagatgatttatttgaa 4091987  T
Q  109 aaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  4091986 aaaaatataataatagcataaaagttggtttttcttgcttatattttgagacaaagaaaatgaga 4091922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 10478253 - 10478087
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||| |||||||||||    
T  10478253 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatcatttgtttgaa 10478154  T
Q  110 -aaaacataataatagcataaaagttgg--tcttttttgcttatattttgagacaaagaatatgaga 173  Q
     ||||||||| |||||||||||| ||||  | ||||||||||||||||||||||||| || ||||||    
T  10478153 aaaaacataaaaatagcataaaaattggttttttttttgcttatattttgagacaaaaaaaatgaga 10478087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 44803973 - 44803823
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| ||    
T  44803973 ataattctcattggttaaaaattatggagaaaataaataggagaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttattt-aa 44803875  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagaca 161  Q
    |||| ||||||||| ||||||||||  |||||||| ||||||||||||||||    
T  44803874 aaaatataataataacataaaagtttatcttttttacttatattttgagaca 44803823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 18833993 - 18834149
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgttt---ga 108  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||    |    
T  18833993 aattatcattggttaattattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttactttag-aaagatgatttttttttaaa 18834091  T
Q  109 aaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  18834092 aaaaacataataatagaataaaagttgatcttttttgcttatattttgggacaaagaa 18834149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 59 - 171
Target Start/End: Original strand, 15858740 - 15858852
Alignment:
Q  59 ttgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgcttatattttgag 158  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  15858740 ttgaatgcaatttgcatttaattttacattggaaaagatgatttatttgaaaaaacataataatagcataaaatttggtcttttttacttatattttgag 15858839  T
Q  159 acaaagaatatga 171  Q
    |||||||||||||    
T  15858840 acaaagaatatga 15858852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 37 - 155
Target Start/End: Complemental strand, 22162368 - 22162249
Alignment:
Q  37 agaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataatagcataaaagtt-g 135  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||      
T  22162368 agaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagattatttgtttgaaaaaacataataatagcataaaagttaa 22162269  T
Q  136 gtcttttttgcttatatttt 155  Q
    ||||||||||||||||||||    
T  22162268 gtcttttttgcttatatttt 22162249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 43451580 - 43451472
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| |||  |||||||||||||||||||    
T  43451580 ataattttcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaa 43451481  T
Q  110 aaaacataa 118  Q
    | |||||||    
T  43451480 ataacataa 43451472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 15068808 - 15068660
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaa 111  Q
    |||||| |||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||  || |||||||||||||  |||||      
T  15068808 aattcttattggttaatgattatggagagaatagaaaggagaacaaattgaatgcaatttgcatttaattttactttggaaaagatgattttcttgaa-- 15068711  T
Q  112 aacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
       |||||      |||||| ||| |||||||||||||||||||||||||||||| ||||    
T  15068710 ---ataat------ataaaaattgatcttttttgcttatattttgagacaaagaaaatga 15068660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 10979186 - 10979104
Alignment:
Q  90 gaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| || ||||||    
T  10979186 gaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttggtcttttttgc-tatattttgagacaaaaaaaatgaga 10979104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 9294728 - 9294603
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaa 111  Q
    |||||| |||||||||  |||||||||| |||| | || ||||||||||||||||||||||||||||||||||  ||  |||||||||||| | |||||     
T  9294728 aattcttattggttaatgattatggagagaatagagagaagaacaaattgaatgcaatttgcatttaattttactttgaaaaagatgatttttatgaaat 9294629  T
Q  112 aacataataatagcataaaagttggt 137  Q
    |||||||||| | ||||||| |||||    
T  9294628 aacataataagaacataaaaattggt 9294603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 26998376 - 26998234
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||   || |||||||| |||| |||||||||| |||||  ||||  ||    
T  26998376 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaatataattaaatatgat 26998278  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||||||||||||||||| |||  ||||||||| ||||    
T  26998277 aaaagttggtcttttttgcttataatttaggacaaagaaaatga 26998234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 20380182 - 20380055
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||   || |||||||| || | ||||||||||||||||  ||||  ||    
T  20380182 attatagagaaaatgaaaacgagagcaaattgaatgcactttgcatttaattttcctttggaaaagataatat-tttgaaaaaacataattaaataagat 20380084  T
Q  128 aaaagttggtcttttttgcttatattttg 156  Q
    |||||||||||||||||||||||| ||||    
T  20380083 aaaagttggtcttttttgcttataatttg 20380055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 32273730 - 32273593
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||| |||||||||||   || ||||| || |||| ||||||||||||||||  ||||  ||    
T  32273730 attatagagaaaatgaaaaagagagcaaattgaatgcactttacatttaattttcctttggaaaatataattt-tttgaaaaaacataattaaatatgat 32273632  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||||||||||||||||| |||  |||||||||    
T  32273631 aaaagttggtcttttttgcttataatttaggacaaagaa 32273593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 44442190 - 44442049
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataatagcataa 129  Q
    ||||| |||||||| |||| || | ||||||||||||| |||||||||||||||   ||||||||||| |||| ||| |||||||||||| | |  ||||    
T  44442190 attatagagaaaatgaaaaagatagcaaattgaatgcactttgcatttaattttcctttagaaaagataatttttttcaaaaaacataattaaataataa 44442091  T
Q  130 aagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||| || ||||| |||||| |||| ||||||||| |||||    
T  44442090 aagttgctc-tttttccttataatttgggacaaagaaaatgag 44442049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 13822854 - 13822959
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaa 112  Q
    ||||| |||||||||  |||||||||| |||| ||| |||||||||||||||||||||||||||||||||||  ||  ||||||| |||| ||| ||| |    
T  13822854 attcttattggttaatgattatggagagaatagaaatgagaacaaattgaatgcaatttgcatttaattttactttgaaaaagattatttttttaaaata 13822953  T
Q  113 acataa 118  Q
    ||||||    
T  13822954 acataa 13822959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 38071054 - 38070912
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| ||||  ||| ||||||||||||| ||| |||||||||||   || |||||||| |||| ||||||||||||||||  ||||  ||    
T  38071054 attatagagaaaatgaaaat-agagcaaattgaatgcactttacatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgat 38070957  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||| |||||||||||||||| |||| ||||||||| |||||    
T  38070956 aaaagtttgtcttttttgcttataatttgggacaaagaaaatgag 38070912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 10979244 - 10979197
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaa 57  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  10979244 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaa 10979197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 32010161 - 32010019
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| |||||| |||||| |||||||||||||||   ||  ||||||| |||| |||||||||| |||||  ||||  ||    
T  32010161 attatagagaaaatgaaaaagagagcaaattaaatgcactttgcatttaattttcctttgaaaaagataattt-tttgaaaaaatataattaaatatgat 32010063  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||| |||||||| |||||| ||||  |||||||| ||||    
T  32010062 aaaagttgatcttttttacttataatttggaacaaagaaaatga 32010019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 9709572 - 9709436
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||  ||||||||||||||||||||||||| ||||||||   || | |||||| |||| ||||||| ||||||||  ||||  ||    
T  9709572 attattgagaaaatgaaagagagaacaaattgaatgcaatttgca-ttaatttttctttggtaaagataattt-tttgaaacaacataattaaatatgat 9709475  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||| |||||||||  ||||| |||| |||||||||    
T  9709474 aaaagttagtctttttttattataatttgggacaaagaa 9709436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 38071571 - 38071658
Alignment:
Q  62 aatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaa-----aaacataataatagcataaaagttggtctttttt 144  Q
    ||||||||||| || |||||||| ||| |||||||||||||||||||||     || |||||||||| ||||||||||| ||||||||    
T  38071571 aatgcaatttgtatataattttacattggaaaagatgatttgtttgaaaaacataatcataataataacataaaagttgctctttttt 38071658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 25572025 - 25571941
Alignment:
Q  90 gaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||||||| ||| ||||||||  ||  ||||| ||||||||| || |||||||||||||||||| ||||||||| |||||    
T  25572025 gaaaagatgattttttttaaaaaacaagattaaatagaataaaagtttgttttttttgcttatattttgggacaaagaaaatgag 25571941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 166
Target Start/End: Original strand, 11031025 - 11031161
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcata 128  Q
    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||   || |||| ||  |||| ||| ||| ||||||||  ||||  |||    
T  11031025 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaattttcttttggaaatgacaattt-tttaaaacaacataattaaatatgata 11031123  T
Q  129 aaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||| |||||||| |||||| |||||| |||||||    
T  11031124 aaagttgatcttttttacttataatttgagtcaaagaa 11031161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 19264042 - 19263996
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  19264042 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 19263996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 6110387 - 6110427
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  6110387 ataaaagtttgtcttttttgcttatattttgggacaaagaa 6110427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 29524252 - 29524304
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  29524252 aatagaataaaagtttgtcttttttacttatattttgggacaaagaaaatgag 29524304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 33198846 - 33198898
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| |||||| || ||||||||||||||||||||| ||||||||| |||||    
T  33198846 aataggataaaattttgtcttttttgcttatattttgggacaaagaaaatgag 33198898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 45660311 - 45660259
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| || |||||||||||||||||| ||||||||| |||||    
T  45660311 aataggataaaagtttgttttttttgcttatattttgggacaaagaaaatgag 45660259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 166
Target Start/End: Original strand, 40808892 - 40808970
Alignment:
Q  90 gaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||||||| ||| |||||||   ||  ||||| |||||| || ||||||||||||||||||||| |||||||||    
T  40808892 gaaaagatgattttttttaaaaaacgagattaaatagaataaaaatttgtcttttttgcttatattttgggacaaagaa 40808970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 5280692 - 5280738
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||| |||||| || ||||||||||||||||||||| |||||||||    
T  5280692 aataggataaaaatttgtcttttttgcttatattttgggacaaagaa 5280738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 38071531 - 38071568
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaa 47  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  38071531 ataattctcattggttaaaaattatgaagaaaaaaaaa 38071568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 41528230 - 41528193
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaa 163  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  41528230 ataaaagtttgtcttttttgcttatattttgggacaaa 41528193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 28858258 - 28858206
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| || |||||||||||||||||  ||||||||| |||||    
T  28858258 aataggataaaagtttgtattttttgcttatattttaggacaaagaaaatgag 28858206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 45085231 - 45085191
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||  |||||||||||||||||||| |||||||||    
T  45085231 ataaaagtttatcttttttgcttatattttgggacaaagaa 45085191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 3e-76; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 43107945 - 43108109
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-a 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |    
T  43107945 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 43108044  T
Q  109 aaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43108045 aaaaacataataataacataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 43108109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 35181266 - 35181103
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  35181266 ataattctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaa 35181167  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35181166 aaaacataataatagcataaaagttggtcttttttgcttatattctgagacaaagaatatgaga 35181103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 45598978 - 45598815
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  45598978 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 45598879  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||    
T  45598878 aaaacataataatagcataaaaattagtcttttttgcttatattttgagacaaagaacatgaga 45598815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 10 - 170
Target Start/End: Complemental strand, 23106527 - 23106366
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  23106527 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 23106428  T
Q  110 aaaacataataatagcataaaagttggtc-ttttttgcttatattttgagacaaagaatatg 170  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  23106427 aaaacataataatagcataaaagttagtctttttttgcttatattttgagacaaataatatg 23106366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 41889245 - 41889084
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||    
T  41889245 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgctttgaattttacattggaaaagatgatttgtttgaa 41889146  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||    
T  41889145 aaaacataataatggcataaaagttgattttttttgcttatattttgagacaaagaatatga 41889084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 47383480 - 47383324
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  47383480 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttacatttaattttacattggaaaagatgatttgtttgaa 47383381  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  47383380 aaaacataataatatcataaaagttggtattttttgcttatattttgagacaaagaa 47383324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 21654161 - 21654324
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| |||||| |||||||||||||    
T  21654161 ataattctcattggttaaaaattatggagaaaatgaaaaggagaacaaattgaatgtaatttgcatttaattttacattggaaaaggtgatttgtttgaa 21654260  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  21654261 aaaacataataatagcataaaagttggtcctttttgtttatattttgagacaaagattatgaga 21654324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 34808293 - 34808130
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||  |||||||||||||||||||    
T  34808293 ataattcttattggttaaaaattatggagaaaataaaaaggtgaacaaattgaatgcaatttgcatttaattttacgttgaaaaagatgatttgtttgaa 34808194  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34808193 aaaacataataataacataaaagttggtcttttttgcttatattttaagacaaagaatatgaga 34808130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 41815733 - 41815896
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| ||||| ||||||| ||||||    
T  41815733 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttacatttaattttacattggaaaatatgatttatttgaa 41815832  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  41815833 aaaacataataatagcataaaagttgatcttttttgcttatattttgagacaaagaaaatgaga 41815896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 3157510 - 3157349
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  3157510 ataattctcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 3157411  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    || |||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  3157410 aatacataataatagcataaaagttagtcttttttgcttatattttgagacaaggaaaatga 3157349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 36576492 - 36576329
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||||    
T  36576492 ataattttcattggttaaaaattatggagaaaacaaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttatttgaa 36576393  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  36576392 aaaacataataatagcataaaagtttgtcttttttacttatattttgagacaaagaaaatgaga 36576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 48879462 - 48879299
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| ||||||    
T  48879462 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttttttgaa 48879363  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||| ||| |||||||||    
T  48879362 aaaacataataataacataaaagttggtcttttttacttatattttaagataaaaaatatgaga 48879299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 40583219 - 40583068
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  |||| ||||||||||||||    
T  40583219 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaatatgatttgtttgaa 40583120  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagaca 161  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  40583119 aaaacataataataacataaaagttggtattttttgcttatattttgagaca 40583068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 44600520 - 44600357
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| | | ||||||||||||| ||||||    
T  44600520 ataattttcattggttaaaaattatggagaaaacaaaaaagagaacaaattgaatgcaacttgcatttaattttacactggaaaagatgatttatttgaa 44600421  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44600420 aaaacataataataacataaaagttggtcttttttgcttatattttgagacaaagaaaatgaga 44600357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 19933095 - 19933256
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  19933095 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 19933194  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||||| |||||| ||||    
T  19933195 aaaacataaaaatagcataaaagtttatcttttttgcttatattttgagataaagaaaatga 19933256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 19964234 - 19964395
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  19964234 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 19964333  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||||| |||||| ||||    
T  19964334 aaaacataaaaatagcataaaagtttatcttttttgcttatattttgagataaagaaaatga 19964395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 40560456 - 40560300
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  40560456 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 40560357  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| |||||||||||| | ||||||||||| ||||||||||||||||||||    
T  40560356 aaaacataaaaatagcataaaaatgggtcttttttgattatattttgagacaaagaa 40560300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 23731634 - 23731483
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  23731634 ataattctcgttgattaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 23731535  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagaca 161  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  23731534 aaaacataaaaatagcataaaagttgatcttttttgcttatattttgagaca 23731483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 42617745 - 42617582
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||| || |||||||||||    
T  42617745 ataattctaattggttaaaaattatggagaaaataaaaaggagcacaaattgaatgcaatttgcatttaattttacattgaaaaaaataatttgtttgaa 42617646  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  42617645 aaaacataataatatcataagagtttgtcttttttgcttatattttgagaaaaagaatatgaga 42617582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 154
Target Start/End: Original strand, 22111370 - 22111514
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  |||| ||||||||||||||    
T  22111370 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaatatgatttgtttgaa 22111469  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattt 154  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||    
T  22111470 aaaacataataataacataaaagttggtattttttgcttatattt 22111514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 166
Target Start/End: Original strand, 32491147 - 32491302
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  32491147 ataattttcattggttaaaaattatggagaaaacaaaaaggagaacaaattaaatgcaacttgcatttaattttacattcgaaaagatgatttgtttgaa 32491246  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  32491247 aaaacataa-aatagcataaaagttggttttttttgcttatattttcagacaaagaa 32491302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 48937929 - 48938088
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-a 108  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| |    
T  48937929 ataattcttattggttaaaaattatggagaaaataaaaagtagaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaa 48938028  T
Q  109 aaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||||||||||| ||||||||    |||||||||||||||| |||||||||||||||    
T  48938029 aaaaacataataatagcacaaaagttg---atttttgcttatattttaagacaaagaatatga 48938088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 48942955 - 48943114
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-a 108  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| |    
T  48942955 ataattcttattggttaaaaattatggagaaaataaaaagtagaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaa 48943054  T
Q  109 aaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||||||||||| ||||||||    |||||||||||||||| |||||||||||||||    
T  48943055 aaaaacataataatagcacaaaagttg---atttttgcttatattttaagacaaagaatatga 48943114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 41890282 - 41890463
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  41890282 ataattctcattaattaaaaattatggagaaaataaaaagaagaacaaattgaatgtaatttgcatttaattttacattaaaaaagatgatttgtttgaa 41890381  T
Q  110 aaaa------------------cataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||                  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41890382 aaaaacataataatacgttcaccataataatagcataaaaattggtcttttttgcttatattttgagacaaagaatatgaga 41890463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 9818542 - 9818392
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |           |||||||||||| ||| ||||||||||||||||||||    
T  9818542 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaatgg-----------catttaattttacattggaaaagatgatttgtttgaa 9818454  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| |  |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  9818453 aaaaaa--ataataacataaaagttggtcttttttgcttatattttgagaaaaagaaaatgaga 9818392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 10720467 - 10720317
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |           |||||||||||| ||| ||||||||||||||||||||    
T  10720467 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaatgg-----------catttaattttacattggaaaagatgatttgtttgaa 10720379  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| |  |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  10720378 aaaaaa--ataataacataaaagttggtcttttttgcttatattttgagaaaaagaaaatgaga 10720317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 18206359 - 18206509
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||| |||  |||||||||||||||||||    
T  18206359 ataattctcattggttaaaaattatggaaaaaataaaaaggagaacaaattaaatacaacttgcatttaattttacattgaaaaagatgatttgtttgaa 18206458  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||           |||||||| |||| |||||||||||||||||||||||||||| ||||    
T  18206459 aaaa-----------cataaaagatggttttttttgcttatattttgagacaaagaaaatga 18206509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 39348843 - 39348708
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataatagcataa 129  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||  || |||||||| | || ||||||| |||| |||||||||||||    
T  39348843 attatcgagaaaatagaaaggagaacaaattgaatacaatttgcatttaattttactttggaaaagattaattttttgaaacaacacaataatagcataa 39348744  T
Q  130 aagttggtcttttttgcttatattttgagacaaaga 165  Q
    |||||||||||||||||||||||||||  |||||||    
T  39348743 aagttggtcttttttgcttatattttggtacaaaga 39348708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 39337584 - 39337445
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatga---tttgtttgaaaaaacataataatagca 126  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||| |||||  || ||||||||||   ||| ||||||| |||| ||||||||||    
T  39337584 attatggagaaaatagaaaggagaacaatttgaatgcaatttgcatttagttttaatttggaaaagatgattttttttttgaaacaacacaataatagca 39337485  T
Q  127 taaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  39337484 taaaagttggtattttttgcttatattttgggacaaagaa 39337445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 7989348 - 7989493
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| |                  |||||    
T  7989348 ataattctcattggttaaaaattatgaagaaaataaaaaggataacaaattgaatgcaacttgcatttaattttaca------------------ttgaa 7989429  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||| ||||| || ||||||    
T  7989430 aaaacataataataacataaaagttggtcttttttacttatattttgaaacaaataaaatgaga 7989493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 12 - 173
Target Start/End: Complemental strand, 30082425 - 30082275
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaa 111  Q
    |||||| |||||||||  |||||||||| |||| ||| ||||| |||||||||||||||||||||||||||||  || ||||||||||||| |||||       
T  30082425 aattcttattggttaatgattatggagagaatagaaaagagaataaattgaatgcaatttgcatttaattttactttggaaaagatgatttttttga--- 30082329  T
Q  112 aacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
            |||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  30082328 --------aataacataaaaattggtcttttttgcttatattttgggacaaagaaaatgaga 30082275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 33153111 - 33153013
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaa 110  Q
    |||||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||  ||||||| |||| |||||||    
T  33153111 aattcttattggttaatgattatggagaaaatagaaaggagaacaaattgaatgcaatttgcatttaattttactttgaaaaagataatttttttgaaa 33153013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 35084143 - 35084253
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaa 111  Q
    |||||| ||||| |||  |||||||||||||| |||||||||||||||| |||||||||||||||||||||||  || |||| |||||||| | |||| |    
T  35084143 aattcttattggataatgattatggagaaaatgaaaaggagaacaaattcaatgcaatttgcatttaattttactttggaaaggatgatttttatgaaga 35084242  T
Q  112 aacataataat 122  Q
    |||||||||||    
T  35084243 aacataataat 35084253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 31769063 - 31769189
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| ||||||||||||| |||| ||||||||||||| |||||||||||||||   || |||||||| || | ||||||||||||||||  ||||  ||    
T  31769063 attatagagaaaataaaaatgagagcaaattgaatgcactttgcatttaattttcctttggaaaagataatat-tttgaaaaaacataattaaatatgat 31769161  T
Q  128 aaaagttggtcttttttgcttatattttg 156  Q
    ||||||||||| |||||||||||| ||||    
T  31769162 aaaagttggtc-tttttgcttataatttg 31769189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 35888070 - 35888203
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||||||||| |||||   || |||||||| |||| ||||||||||||||||  ||||  ||    
T  35888070 attatagagaaaataaaaaagagagcaaattgaatgcactttgcattttattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgat 35888168  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaa 163  Q
     |||||||||||||||| |||||| |||| ||||||    
T  35888169 gaaagttggtctttttt-cttataatttgggacaaa 35888203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 28608445 - 28608373
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    |||||| |||||| ||  |||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  28608445 aattcttattggtcaattattatggagagaatagaaaagagaacaaattgaatgcaatttgcatttaatttta 28608373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 29236117 - 29236242
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataa 118  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||||||||||  |||||||||||  |   |||||||||||| ||||||| ||||||     
T  29236117 attggttaatgattatggagagaataaaaaggagaa-aaattgaatgcaatttatatttaattttacttcgtaaaagatgatttttttgaaataacata- 29236214  T
Q  119 taatagcataaaagttggtcttttttgcttatattttg 156  Q
              ||||||||||||||||||||||||||||    
T  29236215 ----------aaagttggtcttttttgcttatattttg 29236242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 48339322 - 48339389
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagat 97  Q
    ||||||||||||||| |||| |||| ||||| |||||| ||||||||||||||||| || ||||||||    
T  48339322 attatggagaaaatagaaagaagaataaattaaatgcagtttgcatttaattttagtttggaaaagat 48339389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 38260395 - 38260231
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| ||||||||||   ||||| |||||||| |||  |||| |||||| |||||| |||||||||||||||   || |||||||| |||| ||||||    
T  38260395 ataattttcattggttatttattattgagaaaatgaaagagagagcaaattaaatgcactttgcatttaattttcatttggaaaagataattt-tttgaa 38260297  T
Q  110 aaaacataat--aatagcat-aaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    | || |||||  |||| ||| ||||||| || |||||| |||||| |||| ||||||||| |||||    
T  38260296 acaatataattaaatatcataaaaagtttgtattttttacttataatttgggacaaagaaaatgag 38260231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 22369255 - 22369148
Alignment:
Q  60 tgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatattttga 157  Q
    ||||||||| |||||||||||||    || ||||||||||||| ||||||||||||||||  ||||  ||||||||| || |||||| |||||| |||||    
T  22369255 tgaatgcaaattgcatttaatttctcctttgaaaagatgattt-tttgaaaaaacataattaaatatgataaaagttagtttttttttcttataatttga 22369157  T
Q  158 gacaaagaa 166  Q
     ||||||||    
T  22369156 tacaaagaa 22369148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 39170593 - 39170457
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||  || | ||||||||||||| |||||||||||||||   || |||||||| |||| |||| || ||||||||  ||||  ||    
T  39170593 attattgagaaaatgaaagagatagcaaattgaatgcactttgcatttaatttt-cttttgaaaagataattt-tttgtaacaacataattaaatataat 39170496  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||| | ||||||| ||||| ||||||||||||||    
T  39170495 aaaagttgatattttttgtttataatttgagacaaagaa 39170457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 18800913 - 18800966
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| |||||||||  ||||||||||||||||||||| ||||||||| ||||||    
T  18800913 aataacataaaagtatgtcttttttgcttatattttgggacaaagaaaatgaga 18800966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 25944519 - 25944474
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  25944519 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatga 25944474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 166
Target Start/End: Original strand, 47557932 - 47557973
Alignment:
Q  125 cataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  47557932 cataaaagtttgtcttttttgcttatattttgggacaaagaa 47557973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 18102503 - 18102463
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  18102503 ataaaagtttgtcttttttgcttatattttgggacaaagaa 18102463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 24151777 - 24151817
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  24151777 ataaaagttggtcttttttgcttataatttgggacaaagaa 24151817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 47778721 - 47778669
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| |||||| || ||||||||||||||||||||| ||||||||| |||||    
T  47778721 aatagaataaaaatttgtcttttttgcttatattttgggacaaagaaaatgag 47778669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 25944634 - 25944581
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||  ||||  |||||||||| ||||||||||||||||||    
T  25944634 ttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaatttta 25944581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 14805844 - 14805804
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| |||| |||||||||||||||| |||||||||    
T  14805844 ataaaagtttgtctgttttgcttatattttgggacaaagaa 14805804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 15252838 - 15252798
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| |||| |||||||||||||||| |||||||||    
T  15252838 ataaaagtttgtctgttttgcttatattttgggacaaagaa 15252798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 18800834 - 18800906
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgattt 102  Q
    |||||||||  |||| |||  ||| ||||||||||||||||| ||||||||||||  ||  ||||||||||||    
T  18800834 attatggagggaatagaaataagagcaaattgaatgcaatttacatttaattttactttgaaaaagatgattt 18800906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 46760444 - 46760484
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||| ||||||||||| |||||||||    
T  46760444 ataaaagtttgtcttttttacttatattttgggacaaagaa 46760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 48341575 - 48341615
Alignment:
Q  115 ataataatagcataaaagttggtcttttttgcttatatttt 155  Q
    |||||||||||||||||| |||| |||||| ||||||||||    
T  48341575 ataataatagcataaaagatggtattttttacttatatttt 48341615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 31690702 - 31690865
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  31690702 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 31690801  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  31690802 aaaacataataatagcataaaagttggtcttttttgtttatattttgagacaaaaaatatgaga 31690865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 8146095 - 8146258
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  8146095 ataattctcattagttaaaaattatggagaaaataaaaaagagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 8146194  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8146195 aaaacataataataacataaaagttggtcttttttgcttatattttaagacaaagaatatgaga 8146258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 13146806 - 13146643
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  13146806 ataattctcattggttaaaaattatggagaaaacaaaaatgagaacaaattgaatgcaatttacatttaattttacattggaaaagatgatttgtttgaa 13146707  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  13146706 aaaacataataatagcataaaagttggtcttttttgtttatattttgatacaaagaatatgaga 13146643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 42365112 - 42364953
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42365112 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 42365013  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||    || |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42365012 aaa----aacaataacataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 42364953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 20914936 - 20914775
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  20914936 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaa 20914837  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  20914836 aaaacataaaaatagcataaaagttggtattttttgcttatattttaagacaaagaaaatga 20914775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 30086630 - 30086793
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  30086630 ataattctcattggctaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaa 30086729  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  30086730 aaaacataataatgacataaaagttggtcttttttacttatattttgagacaaagaatacgaga 30086793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 35462800 - 35462963
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||| ||||||||||||||| || |||||||||| |||||||||||||||||| |||  |||||||| ||||||||||    
T  35462800 ataattctcattggttaaaaattatgaagaaaataaaaaggataataaattgaatgaaatttgcatttaattttacattgaaaaagatgttttgtttgaa 35462899  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35462900 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaaaatgaga 35462963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 37066305 - 37066466
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  37066305 ataattctcattggttaaaaattatggagaaaataaaaaggacaacaaattgaatgcaatttgcatttaattttacattggaaaagattatttgtttgaa 37066404  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||| |||||||||||| |||| || |||||||||||||||||||| |||||||||||||||    
T  37066405 aaaatataataatagcaaaaaaattagtcttttttgcttatattttaagacaaagaatatga 37066466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 10 - 163
Target Start/End: Original strand, 8541646 - 8541799
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  8541646 ataattctcattggttaaaaattatggagaaaataaaatggagaacaaatttaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 8541745  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaa 163  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||| |||||||    
T  8541746 aaaacataataataacataaaagttggtctttttttgttatattttaagacaaa 8541799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 12638966 - 12638804
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||  |||| || |||||||||||    
T  12638966 ataattctcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgcatttaattttacattgaaaaaaataatttgtttgaa 12638867  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||||||||    
T  12638866 aaaacataataatagcataaaagttagtctttttt-cttatattttgagataaataatatgaga 12638804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 16286165 - 16286328
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||| |||  ||||||| |||||||||||    
T  16286165 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaactaaatgcaacttgcatttaattttacattgaaaaagataatttgtttgaa 16286264  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  16286265 aaaacataaaaattgcataaaagtttgtcttttttacttatattttgagacaaagaaaatgaga 16286328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 10 - 165
Target Start/End: Original strand, 24432482 - 24432637
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||| ||||||||||||| ||||||    
T  24432482 ataattctcattggttaaaaattatggagaaaataaaaaggataacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttatttgaa 24432581  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaaga 165  Q
    |||| |||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  24432582 aaaatataaaaatagtataaaagttggttttttttgcttatattttgagacaaaga 24432637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 25962530 - 25962695
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatt----tgcatttaattttagattagaaaagatgatttgtt 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |    |||||||||||||| |||  |||||||||||||||    
T  25962530 ataattctcattggttaaaaattatggagaaaataaaaagtagaacaaattaaatgcaaatgacttgcatttaattttacattgaaaaagatgatttgtt 25962629  T
Q  106 tgaaaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  25962630 tgaaaaaacataaaaatagcataaaagtttgtattttttgcttatattttgagacaaagaaaatga 25962695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 31316883 - 31317028
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||| |||  |||||||||||||||||||    
T  31316883 ataattctcattggttaaaaattatggagaaaataaaaaggtgaacagattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaa 31316982  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatatttt 155  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||||    
T  31316983 aaaacataaaaataacataaaagttgatcttttttgcttatatttt 31317028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 10 - 156
Target Start/End: Original strand, 17825280 - 17825425
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||  |||| ||||||||||||||    
T  17825280 ataattctcattggttaaaaattatggagaaaataaaaaggaggacaaattgaatgtaatttgcatttaattttacattgaaaaatatgatttgtttgaa 17825379  T
Q  110 aaaacataataatagcataaaagttggtcttttttg-cttatattttg 156  Q
    |||  |||||| |||||||||| || |||||||||| |||||||||||    
T  17825380 aaa--ataatattagcataaaaatttgtcttttttgccttatattttg 17825425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 12 - 171
Target Start/End: Complemental strand, 24439647 - 24439488
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgt-ttgaaa 110  Q
    |||| ||||||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  || | ||||||||||| | ||||||    
T  24439647 aattatcattggctaattattatggaaaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta-ctttggaaagatgatttttgttgaaa 24439549  T
Q  111 aaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  24439548 aaacataataataacataaaagttgatcttttttgcttatattttgcgacaaagaaaatga 24439488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 8144009 - 8143858
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaa 111  Q
    ||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||||  |||||||||||  ||  |||||| ||||| ||||||||    
T  8144009 aattctcattggttaatgattatggagaaaataaaatgtagaacaaattgaatgcaatttatatttaattttactttgaaaaagaagatttatttgaaaa 8143910  T
Q  112 aacataataatagcataaaagttggtcttttttgcttatattttgagacaaa 163  Q
    |||||||||||||||||||||||| ||||||||||||||||| || ||||||    
T  8143909 aacataataatagcataaaagttgatcttttttgcttatattatgggacaaa 8143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 2002217 - 2002323
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaa 111  Q
    |||||| |||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||| |||||||     
T  2002217 aattcttattggttaatgattatggagagaatagaaaggagaacaaattgaatgcaatttgcatttaattttattttggaaaagatgatttttttgaaat 2002316  T
Q  112 aacataa 118  Q
    |||||||    
T  2002317 aacataa 2002323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 20452543 - 20452668
Alignment:
Q  49 ggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtc-ttttttgct 147  Q
    |||||||||||||||| |||||| |||||||||||| | |  || |||||| || |||||||||| ||||||| ||||||||| ||| || |||||| ||    
T  20452543 ggagaacaaattgaatacaatttacatttaattttacaatgaaagagatgaattatttgaaaaaatataataacagcataaaaattgatctttttttact 20452642  T
Q  148 tatattttgagacaaagaatatgaga 173  Q
    |||||||||| ||||| |||||||||    
T  20452643 tatattttgaaacaaacaatatgaga 20452668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 28907122 - 28906984
Alignment:
Q  36 gagaaaat-aaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaag 132  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||  |||  ||||||| |||| ||||| ||||||||||  ||||  |||| ||    
T  28907122 gagaaaatgaaaaaagagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt-tttgataaaacataattaaatatgataacag 28907024  T
Q  133 ttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||||||||||||| |||| || |||||| |||||    
T  28907023 ttggtcttttttgcttataatttgggataaagaaaatgag 28906984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 28943517 - 28943379
Alignment:
Q  36 gagaaaat-aaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaag 132  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||  |||  ||||||| |||| ||||| ||||||||||  ||||  |||| ||    
T  28943517 gagaaaatgaaaaaagagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt-tttgataaaacataattaaatatgataacag 28943419  T
Q  133 ttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||||||||||||| |||| || |||||| |||||    
T  28943418 ttggtcttttttgcttataatttgggataaagaaaatgag 28943379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 3463917 - 3464040
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||   || ||||| || |||| ||| ||||||||||||  ||||  ||    
T  3463917 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttttcttggaaaaaataatttttttaaaaaaacataattaaatatgat 3464016  T
Q  128 aaaagttggtcttttttgcttata 151  Q
    |||||||| |||||||||||||||    
T  3464017 aaaagttgatcttttttgcttata 3464040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 32433628 - 32433570
Alignment:
Q  114 cataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
T  32433628 cataataatagtataaaaatttgtcttttttgcttatattttgagacaaagaatatgag 32433570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 8959699 - 8959577
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| ||||||||  ||| |||| ||||||||| ||| ||| |||||||||||   || |||||||| |||| ||||||||||||||||  ||||  ||    
T  8959699 attatagagaaaatggaaaagagagcaaattgaacgcactttacatttaatttttctttggaaaagataattt-tttgaaaaaacataattaaatatgat 8959601  T
Q  128 aaaagttggtcttttttgcttata 151  Q
    ||||||||||||||||||||||||    
T  8959600 aaaagttggtcttttttgcttata 8959577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 16153447 - 16153590
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||| | |||| |||| |||||| |||||| |||| ||||||||||   || |||||||| |||| ||||||||||||||||  ||||  ||    
T  16153447 attatagagaaagtgaaaaagagagcaaattaaatgcactttgtatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgat 16153545  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||| |||||||||||||||  |||| |||||| || |||||    
T  16153546 aaaagtttgtcttttttgcttatcatttgggacaaacaaaatgag 16153590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 8506471 - 8506353
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatat 152  Q
    ||||||||||||| |||||||||||||||   || |||||||| |||| ||||||| ||||||||  ||||  | |||||||| |||||||| ||||||     
T  8506471 caaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaacaacataattaaatatgacaaaagttgatcttttttacttataa 8506373  T
Q  153 tttgagacaaagaatatgag 172  Q
    |||| || |||||| |||||    
T  8506372 tttgggagaaagaaaatgag 8506353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 42273598 - 42273546
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  42273598 aataggataaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 42273546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 1144624 - 1144720
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttata 151  Q
    ||||||||||||| |||||||||||||||   || |||||||| |||| ||||||||| ||| ||  ||||  ||||||||||||||||||||||||||    
T  1144624 caaattgaatgcactttgcatttaatttttctttggaaaagataattt-tttgaaaaa-cattattaaatatgataaaagttggtcttttttgcttata 1144720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 10154055 - 10154152
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttata 151  Q
    ||||||||||||| |||||||||||||||   || ||| |||| |||| ||||||| ||||||||  ||||  ||||||||| ||||||||||||||||    
T  10154055 caaattgaatgcactttgcatttaatttttctttggaagagataattt-tttgaaacaacataattaaatatgataaaagtttgtcttttttgcttata 10154152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 172
Target Start/End: Complemental strand, 32079538 - 32079421
Alignment:
Q  56 aaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatatt 153  Q
    ||||| ||||||||||||||||||||| || |||||||||| || || ||||||| ||||||||  | ||  | |||||||  ||||||||||||||| |    
T  32079538 aaattaaatgcaatttgcatttaatttcagtttagaaaagacgagtt-tttgaaataacataattaagtatgacaaaagtttatcttttttgcttataat 32079440  T
Q  154 ttgagacaaagaatatgag 172  Q
    |||  |||||||| |||||    
T  32079439 ttggaacaaagaaaatgag 32079421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 9957634 - 9957680
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  9957634 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 9957680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 29307317 - 29307428
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatat 152  Q
    ||||||||||||| |||||||||||||||   || ||||| || |||| || |||||| ||||||  ||||  ||||||||| ||||||||||||||||     
T  29307317 caaattgaatgcactttgcatttaattttcctttggaaaa-ataattttttagaaaaa-cataattaaatatgataaaagttagtcttttttgcttataa 29307414  T
Q  153 tttgagacaaagaa 166  Q
    ||||| ||||||||    
T  29307415 tttgaaacaaagaa 29307428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 8225406 - 8225361
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  8225406 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatga 8225361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 39505450 - 39505495
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  39505450 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatga 39505495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 12730199 - 12730251
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  12730199 aataggataaaagtttgtcttttttacttatattttgggacaaagaaaatgag 12730251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 25840843 - 25840766
Alignment:
Q  90 gaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||||||| ||| ||||||||  ||  ||||| ||||||||| ||| ||||||||||||||||| |||||||||    
T  25840843 gaaaagatgattttttt-aaaaaacaagattaaatagaataaaagtttgtcatttttgcttatattttgggacaaagaa 25840766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 20643957 - 20643911
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||| ||||||||||||||||||||| || |||||| |||||    
T  20643957 ataaaagtttgtcttttttgcttatattttgggataaagaaaatgag 20643911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 34425273 - 34425227
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||| ||||||||||||||||||||  ||||||||| |||||    
T  34425273 ataaaagtttgtcttttttgcttatattttaggacaaagaaaatgag 34425227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 38280794 - 38280748
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||| ||||||||| |||||||||  ||||||||||||||||||||    
T  38280794 aataggataaaagtttgtcttttttatttatattttgagacaaagaa 38280748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 42273705 - 42273654
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||||||||| |||  |||||  ||||||||||||||||||||||||||||    
T  42273705 ttatggagaaaatgaaagagagaa--aattgaatgcaatttgcatttaatttta 42273654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 445990 - 446043
Alignment:
Q  29 aattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattt 82  Q
    ||||| ||||||||| |||  ||||| |||||||||||||||| ||||||||||    
T  445990 aattacggagaaaatgaaagagagaaaaaattgaatgcaattttcatttaattt 446043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 15006413 - 15006450
Alignment:
Q  47 aaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  15006413 aaggataacaaattgaatgcaatttgtatttaatttta 15006450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 842753 - 842793
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||  |||||||||||||||||||| |||||||||    
T  842753 ataaaagtttatcttttttgcttatattttgggacaaagaa 842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 11262071 - 11262111
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||| ||||||||||| |||||||||    
T  11262071 ataaaagtttgtcttttttacttatattttgggacaaagaa 11262111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 12793019 - 12793071
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||||||| || ||||||||||||||||||  |||||||| |||||    
T  12793019 aataggataaaagtttgtattttttgcttatattttggaacaaagaaaatgag 12793071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 37522777 - 37522817
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| ||| |||||    
T  37522777 ataaaagtttgtcttttttgcttatattttgggacgaagaa 37522817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 37562949 - 37562989
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| ||| |||||    
T  37562949 ataaaagtttgtcttttttgcttatattttgggacgaagaa 37562989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 1e-75; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 26641156 - 26641319
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||||    
T  26641156 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttaccttgaaaaagatgatttgtttgaa 26641255  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26641256 aaaacataataatagcataaaagttggtgttttttgcttatattttgagacaaagaatatgaga 26641319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 55400814 - 55400653
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  55400814 ataattctcattggttaaaaattatggagaaaataaaaaggtgaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 55400715  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  55400714 aaaacataataatagcataaaagtaagtcttttttgcttatattttgagacaaagaatatga 55400653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 23513643 - 23513480
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||    
T  23513643 ataattctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgttttgtttgaa 23513544  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23513543 aaaacataataatagcataaaagttggtattttttgcttatattttgagacaaagaatatgaga 23513480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 31126288 - 31126125
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  31126288 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaa 31126189  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31126188 aaaacataataatggcataaaagttggtcttttttgtttatattttgagacaaagaatatgaga 31126125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 21654321 - 21654157
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  21654321 ataattttcatttgttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 21654222  T
Q  110 -aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21654221 aaaaacataataataacataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 21654157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 46580612 - 46580451
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| ||||||||||||||    
T  46580612 ataattctcattgattaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgtaaaatatgatttgtttgaa 46580513  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46580512 aaaacataataatggcataaaagttggtcttttttacttatattttgagacaaagaatatga 46580451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 1335186 - 1335023
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  1335186 ataatttttattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaa 1335087  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1335086 aaaacataataataacataaaaattggtcttttttgcttatattttgagacaaagaatatgaga 1335023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 10 - 163
Target Start/End: Complemental strand, 28793238 - 28793084
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt-agattagaaaagatgatttgtttga 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||||    
T  28793238 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttttacattagaaaagatgatttgtttga 28793139  T
Q  109 aaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaa 163  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28793138 aaaaacataaaaatagcataaaagttggtcttttttgcttatattttgagacaaa 28793084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 53020259 - 53020095
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  53020259 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaa 53020160  T
Q  110 -aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
     |||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||    
T  53020159 aaaaacataataatagcataaaagttggtattttttacttatattttgagacaaaaaatatgaga 53020095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 51426695 - 51426530
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  51426695 ataattttcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgtaatttgcatttaattttacattagaaaagatgatttgtttgaa 51426596  T
Q  110 --aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
      ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51426595 aaaaaacataagaataacataaaagttggtcttttttgcttatattttaagacaaagaatatgaga 51426530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 45781473 - 45781310
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  45781473 ataattctcattggttaaaaattatggagaagataaaaatgagaacaaattaaatgcaacttgaatttaattttacattggaaaagatgatttgtttgaa 45781374  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  45781373 aaaacataaaaatagcataaaagttgatcttttttgcttatattttgagacaaagaaaatgaga 45781310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 170
Target Start/End: Original strand, 37324128 - 37324292
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-- 107  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||      
T  37324128 ataattctcattggttaaaaattatggagaaaataaaaagggaaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 37324227  T
Q  108 --aaaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatg 170  Q
      |||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  37324228 aaaaaaaacataataatgacataaaagttggtcttttttgcttatattttaagacaaagaatatg 37324292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 13541343 - 13541194
Alignment:
Q  20 ttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat 119  Q
    ||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  13541343 ttggttaaaaattatagagaaaataaaaaggaaaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgttcgaaaaaacataat 13541244  T
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatat 169  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  13541243 aataacataaaagttggtctttttttcttatattttgagacaaagaatat 13541194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 10 - 163
Target Start/End: Complemental strand, 43576033 - 43575881
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| |||||||||||||||||||||||     
T  43576033 ataattatcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattagaaaagatgatttgtttga- 43575935  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaa 163  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  43575934 aaaacataaaaatagcataaaagttgatcttttttgcttatattttgagacaaa 43575881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 46296121 - 46296266
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||  ||||||||||||||||||||    
T  46296121 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacatcggaaaagatgatttgtttgaa 46296220  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatatttt 155  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||    
T  46296221 aaaacataaaaatagcataaaagttgatcttttttgcttatatttt 46296266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 51255262 - 51255108
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  51255262 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttagattggaaaagatgatttgtttgaa 51255163  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||  |||| ||||||||||| |||||||| |||||||||||||||||||||    
T  51255162 aaaacata--aataacataaaagttgatcttttttacttatattttgagacaaagaa 51255108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 166
Target Start/End: Original strand, 16739204 - 16739355
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||     ||||||||||| ||| ||||||||||||||||||||    
T  16739204 ataattctcattggttaaaaattatggagaaaataaaaaggaaaacaaattaaatgcaa-----atttaattttacattggaaaagatgatttgtttgaa 16739298  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16739299 aaaatataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 16739355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 32322283 - 32322446
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| ||||||||||| |||  ||||||| |||||||||||    
T  32322283 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgtatttaattttacattgaaaaagataatttgtttgaa 32322382  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||| ||||||||||||  | ||||||||| ||||||||||||||||||||| ||||||    
T  32322383 aaaacataaaaatagcataaaatctagtcttttttacttatattttgagacaaagaaaatgaga 32322446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 52172057 - 52172204
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttg-aaaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||  ||||||||||||||||| ||||    
T  52172057 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaa 52172156  T
Q  112 aacataataatagcataaaagttggtcttttttgcttatattttgaga 159  Q
    ||||||| |||||||||||| ||  |||||||||||||||||||||||    
T  52172157 aacataaaaatagcataaaaattaatcttttttgcttatattttgaga 52172204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 32 - 173
Target Start/End: Complemental strand, 46820103 - 46819962
Alignment:
Q  32 tatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataataatagcataaaa 131  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  46820103 tatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttaaaaaaacataaaaatagcataaaa 46820004  T
Q  132 gttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    |||| ||||||||  |||||||||||||||||||| ||||||    
T  46820003 gttgatcttttttatttatattttgagacaaagaaaatgaga 46819962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 49068127 - 49068018
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  49068127 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaa 49068028  T
Q  110 aaaacataat 119  Q
    ||||||||||    
T  49068027 aaaacataat 49068018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 36189052 - 36189206
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtt-tgaaa 110  Q
    ||||||||||||||||  ||| || | |||||||||||| |||||||||||||||||||||||||||||||||  || ||||||| ||||| || |||||    
T  36189052 aattctcattggttaatgattgtgaataaaataaaaaggtgaacaaattgaatgcaatttgcatttaattttactttggaaaagaagattttttgtgaaa 36189151  T
Q  111 aaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  36189152 aaacataataataacataaaagatggtcttttttgcttatattttg-gacaaagaa 36189206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 52252112 - 52252004
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||||||| ||| ||||||||||||||||||||    
T  52252112 ataattctcattgattaaaaattatggagaaaataaaaaagagaacaaattaaatgtaacttgcatttaattttacattggaaaagatgatttgtttgaa 52252013  T
Q  110 aaaacataa 118  Q
    |||||||||    
T  52252012 aaaacataa 52252004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 34022617 - 34022534
Alignment:
Q  90 gaaaagatgatttgtttgaaaaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||||| ||||||    
T  34022617 gaaaagatgatttgtttgaaaaaacataaaaatagcataaaaaatggttttttttgcttatattttgagacaaagaaaatgaga 34022534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 22456069 - 22456212
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||   || |||||||| |||| ||||||||||||||||  ||||  ||    
T  22456069 attatagagaaaatgaaaaagagagcaaattgaatgcattttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgat 22456167  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||||||||||||||||||||| |||| || |||||| |||||    
T  22456168 aaaagttggtcttttttgcttataatttgggataaagaaaatgag 22456212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 22479115 - 22479257
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||   || |||||||| |||| ||||||||||||||||  ||||  ||    
T  22479115 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgat 22479213  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||| |||||||||||||||| |||| ||||||||| ||||    
T  22479214 aaaagtttgtcttttttgcttataatttgggacaaagaaaatga 22479257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 172
Target Start/End: Complemental strand, 21214298 - 21214155
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| ||||||||||||| |||| ||||||||||||| |||||||||||||||   || |||||||| || | ||||||||||||||||  |||   ||    
T  21214298 attattgagaaaataaaaaagagagcaaattgaatgcactttgcatttaattttcatttggaaaagataatat-tttgaaaaaacataattaaatgtgat 21214200  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||||| ||||||||||||||| |||| ||||||||| |||||    
T  21214199 aaaagttgatcttttttgcttataatttgggacaaagaaaatgag 21214155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 23209347 - 23209484
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagt 133  Q
    |||||||| ||| |||||||| | |||||||||||||||||||||||    || | ||||||||||| ||||||| ||||||||  ||||  ||||||||    
T  23209347 gagaaaatgaaagggagaacataatgaatgcaatttgcatttaatttctctttgggaaagatgattt-tttgaaataacataattaaatatgataaaagt 23209445  T
Q  134 tggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    |||||||||||||||||| ||| |||||||||| |||||    
T  23209446 tggtcttttttgcttataatttaagacaaagaaaatgag 23209484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 51309487 - 51309348
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaa 111  Q
    |||||| |||||||||  |||||||||| |||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||  |||||      
T  51309487 aattcttattggttaatgattatggagagaatagaaaggggaacaaattgaatgcaatttgcatttaattttaatttagaaaagattattttcttgaa-- 51309390  T
Q  112 aacataataatagcataaaagttggtc-ttttttgcttatattttgagaca 161  Q
       |||||      ||||||||||||| |||||||||||||||||||||||    
T  51309389 ---ataat------ataaaagttggtctttttttgcttatattttgagaca 51309348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 45347757 - 45347815
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45347757 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaa 45347815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 10252068 - 10251926
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| ||||  ||| ||||||||||||| ||||| |||||||||   || |||||||| || | ||||||||||||||||  ||||  ||    
T  10252068 attatagagaaaatgaaaaatagagcaaattgaatgcactttgcttttaattttcctttggaaaagataatct-tttgaaaaaacataattaaatatgat 10251970  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||    
T  10251969 aaaagttggtattttttgcttataatttgagacaaagaaaatga 10251926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 2994479 - 2994616
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||   || |||||||| |||| ||||||||||||||||  ||||  ||    
T  2994479 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatacgat 2994577  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||| ||| ||||| |||||| |||| |||||||||    
T  2994578 aaaagtttgtcattttttcttataatttgggacaaagaa 2994616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 38401438 - 38401294
Alignment:
Q  29 aattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagca 126  Q
    |||||| |||||||| |||| ||||  ||||| |||| | |||||||||||||||   || |||||||| |||| ||||||||||||||||  ||||  |    
T  38401438 aattatagagaaaatgaaaaagagagaaaattaaatgtactttgcatttaattttcttttggaaaagattattt-tttgaaaaaacataattaaatatga 38401340  T
Q  127 taaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||| ||||||||||||||| |||| ||||||||| |||||    
T  38401339 taaaagttgatcttttttgcttataatttgggacaaagaaaatgag 38401294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 49067080 - 49067028
Alignment:
Q  119 taatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  49067080 taatagcataaaagttgatcttttttgcttatattttgagacaaagaatatga 49067028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 49584016 - 49583890
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagt 133  Q
    |||||||| ||||  ||| ||||||||||||| ||| |||||||||||   || |||||||| |||| ||||||||||||||||  ||||  ||||||||    
T  49584016 gagaaaatgaaaaacagagcaaattgaatgcactttacatttaatttttctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagt 49583918  T
Q  134 tggtcttttttgcttatattttgagaca 161  Q
    |||||||||||||||||| |||| ||||    
T  49583917 tggtcttttttgcttataatttgggaca 49583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 54725665 - 54725806
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcata 128  Q
    |||| ||||||||||||| |||| ||||||||||||| |||| ||||||||||   ||  ||||||| |||| |||||||||| |||||  ||||  |||    
T  54725665 ttattgagaaaataaaaaagagagcaaattgaatgcactttgtatttaattttcttttgaaaaagataattt-tttgaaaaaatataattaaatatgata 54725763  T
Q  129 aaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||| | ||||||||||||||| |||| ||||||||| ||||    
T  54725764 aaagtagatcttttttgcttataatttgggacaaagaaaatga 54725806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 34022675 - 34022625
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaatt 60  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34022675 ataattctcattggttaaaaattatagagaaaataaaaaggagaacaaatt 34022625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 45347814 - 45347875
Alignment:
Q  112 aacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  45347814 aacataaaaatagtataaaagttgatcttttttgcttatattttgagacaaagaaaatgaga 45347875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 10114968 - 10114827
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| ||||  ||| ||||||||||||| ||||| |||||||||   || |||||||| || || |||||||||||||||  ||||  ||    
T  10114968 attatagagaaaatgaaaaatagagcaaattgaatgcactttgcttttaattttcctttggaaaagataatctg-ttgaaaaaacataattaaatatgat 10114870  T
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||||| || ||||||||||||| |||||||||||||| ||||    
T  10114869 aaaagtt-gtattttttgcttataatttgagacaaagaaaatga 10114827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 166
Target Start/End: Complemental strand, 34194944 - 34194808
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcata 128  Q
    |||| |||||||| |||  |||| |||| |||||||| |||||||||||||||   || |||||||| |||| ||||||| ||||||||  || |  |||    
T  34194944 ttattgagaaaatgaaagagagagcaaactgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaacaacataattaaaaatgata 34194846  T
Q  129 aaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||||||||||||||||| | || |||||||||    
T  34194845 aaagttggtcttttttgcttataatctgggacaaagaa 34194808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 47444034 - 47444174
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat-----aatag 124  Q
    ||||| |||||||| |||| || | ||||||||||||| |||||||||||||||   || |||||||| |||| |||||||||||||| |     ||||     
T  47444034 attatagagaaaatgaaaaagatagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaaaaacatagtaattaaatat 47444132  T
Q  125 cataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
     |||||||||| | ||||||||||||| |||| |||||||||    
T  47444133 gataaaagttgatattttttgcttataatttgggacaaagaa 47444174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 46303618 - 46303534
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaaga 96  Q
    |||||| |||||||||  |||||||||||||||  ||| | |||||||| ||||||||||||||||||||||   ||||||||||    
T  46303618 aattcttattggttaatgattatggagaaaataggaagaataacaaattaaatgcaatttgcatttaatttttctttagaaaaga 46303534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 166
Target Start/End: Original strand, 30454786 - 30454923
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcata 128  Q
    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||   || |||||||| |||| ||||||| ||||||||  ||||   ||    
T  30454786 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt-tttgaaacaacataattaaatatgcta 30454884  T
Q  129 aaagttgg-tcttttttgcttatattttgagacaaagaa 166  Q
    |||||||| | ||||||||||||| |||| |||||||||    
T  30454885 aaagttggtttttttttgcttataatttgggacaaagaa 30454923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 25242239 - 25242292
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  25242239 attatagagaaaataaaaaagagaacaaattgaatgcactttgcgtttaatttt 25242292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 33974738 - 33974783
Alignment:
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  33974738 aaaagtttgtcttttttgcttatattttgagacaaagaaaatgaga 33974783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 48291870 - 48291763
Alignment:
Q  39 aaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcataaaagttgg 136  Q
    ||||| |||| |||| ||||||||||||| ||| |||||||||||   || |||||||| |||| ||||||||||||||||  ||||  ||||||||||     
T  48291870 aaaatgaaaaagagagcaaattgaatgcactttccatttaattttcctttggaaaagataattt-tttgaaaaaacataattaaatatgataaaagttga 48291772  T
Q  137 tcttttttg 145  Q
    |||||||||    
T  48291771 tcttttttg 48291763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 7886660 - 7886806
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaa 111  Q
    |||| ||||||||||  | |||| |||||||| |||  |||| ||||||||||||| ||||||||| |||||   || ||||||||||||| ||| |||     
T  7886660 aattttcattggttattagttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttgatttttctttggaaaagatgattt-tttaaaac 7886758  T
Q  112 aacataat--aatagcataaaagttggt-cttttttgcttatattttg 156  Q
    ||||||||  ||||  ||||||||||||  ||||||||||||| ||||    
T  7886759 aacataattaaatatgataaaagttggtatttttttgcttataatttg 7886806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 2927235 - 2927189
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||| |||||||||||||||||||| |||||||||| |||||    
T  2927235 ataaaagtttgtcttttttgcttatattttaagacaaagaaaatgag 2927189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 14752385 - 14752431
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  14752385 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatgag 14752431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 50651099 - 50651152
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    |||||||||||||||||  ||||  |||||||||| ||||||||||||||||||    
T  50651099 ttatggagaaaataaaagagagagaaaattgaatgtaatttgcatttaatttta 50651152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 11054454 - 11054494
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  11054454 ataaaagtttgtcttttttgcttatattttgggacaaagaa 11054494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 37074911 - 37074860
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||| ||||||||| ||||||||||||||||||| | ||||||||| ||||    
T  37074911 aataggataaaagtttgtcttttttgcttatatttcgggacaaagaaaatga 37074860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 46711830 - 46711881
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||| ||||||||| || |||| ||||||||||||||||||||||| ||||    
T  46711830 aataggataaaagtttgttttttatgcttatattttgagacaaagaaaatga 46711881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 20847329 - 20847383
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    |||||||||||||| |||  ||| | |||||||||| ||||||||||||||||||    
T  20847329 attatggagaaaatgaaagagaggaaaaattgaatgtaatttgcatttaatttta 20847383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 36546518 - 36546480
Alignment:
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  36546518 aaaagtttgtcttttttgcttatattttgggacaaagaa 36546480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 36561797 - 36561835
Alignment:
Q  128 aaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  36561797 aaaagtttgtcttttttgcttatattttgggacaaagaa 36561835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 8097059 - 8097132
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||||| ||||||||||    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||    
T  8097059 ataattttcattggttattgcttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 8097132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 10014326 - 10014238
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat 119  Q
    ||||| |||||||||||||  |||  |||||||||||| ||||| |||||||||   || |||||||| || | ||||||||||||||||    
T  10014326 attatagagaaaataaaaaatagagtaaattgaatgcactttgcttttaattttcctttggaaaagataatct-tttgaaaaaacataat 10014238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 35963214 - 35963161
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  35963214 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 35963161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 50730171 - 50730118
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||| ||||  |||||||||| ||||| ||||||||||||    
T  50730171 ttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaatttta 50730118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 50782683 - 50782736
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||| ||||  |||||||||| ||||| ||||||||||||    
T  50782683 ttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaatttta 50782736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 3972318 - 3972286
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattt 82  Q
    |||||||||||||||| ||||||||||||||||    
T  3972318 gagaacaaattgaatgtaatttgcatttaattt 3972286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 3997560 - 3997592
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattt 82  Q
    |||||||||||||||| ||||||||||||||||    
T  3997560 gagaacaaattgaatgtaatttgcatttaattt 3997592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 6075035 - 6074983
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgag 172  Q
    ||||| ||||| ||| ||||||||||||||||||||| ||||| ||| |||||    
T  6075035 aataggataaatgtttgtcttttttgcttatattttgggacaatgaaaatgag 6074983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 23311739 - 23311779
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| | ||||||||||||||||||| |||||||||    
T  23311739 ataaaagtttgacttttttgcttatattttgggacaaagaa 23311779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 4705 - 4543
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||||||||||| |    
T  4705 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttatattggaaa-gatgatttgtttgga 4607  T
Q  110 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4606 aaaacataataatagcataaaagttggtcttttttgcttatattttgagacaaagaatatgaga 4543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 3227 - 3105
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttagattagaaaagatgatttgtttgaaaaaacataat--aatagcat 127  Q
    ||||| |||||||| |||| || ||||||||||||||| ||||||| |||||||   || |||||||| |||| ||||||||||||||||  ||||  ||    
T  3227 attatagagaaaatgaaaaagaaaacaaattgaatgcactttgcatataattttgctttggaaaagataattt-tttgaaaaaacataattaaatatgat 3129  T
Q  128 aaaagttggtcttttttgcttata 151  Q
    |||||||| |||||||||||||||    
T  3128 aaaagttgatcttttttgcttata 3105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 961 - 910
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  961 aataggataaaagtttgtcttttttgcttatattttgggacaaagaaaatga 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 8921 - 8870
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaatatga 171  Q
    ||||| ||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  8921 aataggataaaagtttgtcttttttgcttatattttgggacaaagaaaatga 8870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 157743 - 157697
Alignment:
Q  120 aatagcataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  157743 aatagaataaaagtttgtcttttttgcttatattttgggacaaagaa 157697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 77931 - 77891
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  77931 ataaaagtttgtcttttttgcttatattttgggacaaagaa 77891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 3615 - 3655
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||  |||||||||||||||||||| |||||||||    
T  3615 ataaaagtttatcttttttgcttatattttgggacaaagaa 3655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 154835 - 154795
Alignment:
Q  126 ataaaagttggtcttttttgcttatattttgagacaaagaa 166  Q
    |||||||||  |||||||| |||||||||||||||||||||    
T  154835 ataaaagtttatcttttttacttatattttgagacaaagaa 154795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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