View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19644_low_11 (Length: 237)

Name: NF19644_low_11
Description: NF19644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19644_low_11
NF19644_low_11
[»] chr3 (39 HSPs)
chr3 (62-234)||(50094962-50095133)
chr3 (1-65)||(50095175-50095239)
chr3 (107-155)||(25627908-25627956)
chr3 (107-155)||(22339809-22339857)
chr3 (107-155)||(51642416-51642464)
chr3 (107-154)||(9264075-9264122)
chr3 (107-154)||(9264282-9264329)
chr3 (107-154)||(22407430-22407477)
chr3 (107-154)||(22407637-22407684)
chr3 (107-154)||(44573707-44573754)
chr3 (107-154)||(44574004-44574051)
chr3 (107-154)||(47833642-47833689)
chr3 (107-154)||(50692391-50692438)
chr3 (107-154)||(50692594-50692641)
chr3 (107-154)||(51338392-51338439)
chr3 (107-154)||(51642624-51642671)
chr3 (107-145)||(9179201-9179239)
chr3 (107-149)||(13769285-13769327)
chr3 (107-152)||(4191113-4191158)
chr3 (109-154)||(4255989-4256034)
chr3 (107-152)||(5440685-5440730)
chr3 (118-155)||(21832187-21832224)
chr3 (118-155)||(50203845-50203882)
chr3 (118-154)||(4029633-4029669)
chr3 (76-108)||(4255491-4255523)
chr3 (76-108)||(4256215-4256247)
chr3 (76-108)||(13769382-13769414)
chr3 (118-154)||(35011736-35011772)
chr3 (118-154)||(35011943-35011979)
chr3 (118-154)||(37058760-37058796)
chr3 (76-108)||(41380705-41380737)
chr3 (107-155)||(43101359-43101407)
chr3 (76-108)||(43101462-43101494)
chr3 (76-108)||(44573307-44573339)
chr3 (118-154)||(44573405-44573441)
chr3 (76-108)||(44573620-44573652)
chr3 (76-108)||(45443261-45443293)
chr3 (118-154)||(48685301-48685337)
chr3 (76-108)||(54369020-54369052)
[»] chr8 (27 HSPs)
chr8 (107-155)||(20298504-20298552)
chr8 (107-155)||(21085136-21085184)
chr8 (68-108)||(36994023-36994063)
chr8 (107-154)||(3183900-3183947)
chr8 (107-154)||(7621962-7622009)
chr8 (107-154)||(10989023-10989070)
chr8 (107-154)||(10989230-10989277)
chr8 (107-154)||(16454624-16454671)
chr8 (107-154)||(18905924-18905971)
chr8 (107-154)||(32931469-32931516)
chr8 (107-154)||(36997234-36997281)
chr8 (107-154)||(43599379-43599426)
chr8 (108-154)||(33435748-33435794)
chr8 (108-154)||(40754513-40754559)
chr8 (117-154)||(30066060-30066097)
chr8 (71-108)||(34248335-34248372)
chr8 (117-154)||(43599550-43599587)
chr8 (76-108)||(18905837-18905869)
chr8 (76-108)||(20298607-20298639)
chr8 (118-154)||(20760649-20760685)
chr8 (76-108)||(21085239-21085271)
chr8 (76-108)||(23027596-23027628)
chr8 (76-108)||(23027919-23027951)
chr8 (68-108)||(27402204-27402244)
chr8 (76-108)||(31766982-31767014)
chr8 (76-108)||(36997147-36997179)
chr8 (118-154)||(43984305-43984341)
[»] chr7 (16 HSPs)
chr7 (107-154)||(23821665-23821712)
chr7 (111-154)||(258501-258544)
chr7 (107-154)||(1663593-1663640)
chr7 (107-154)||(6783106-6783153)
chr7 (107-154)||(8585159-8585206)
chr7 (107-154)||(23396677-23396724)
chr7 (107-154)||(41670901-41670948)
chr7 (109-154)||(5775952-5775997)
chr7 (107-152)||(29780215-29780260)
chr7 (76-108)||(257358-257390)
chr7 (118-154)||(13310414-13310450)
chr7 (76-108)||(28910013-28910045)
chr7 (107-154)||(34027734-34027779)
chr7 (76-108)||(41670849-41670881)
chr7 (76-108)||(41709999-41710031)
chr7 (76-108)||(43167984-43168016)
[»] chr2 (17 HSPs)
chr2 (107-154)||(31761200-31761247)
chr2 (107-149)||(10849485-10849527)
chr2 (107-155)||(23054394-23054442)
chr2 (107-154)||(21214190-21214237)
chr2 (107-154)||(32667251-32667298)
chr2 (107-154)||(33985760-33985807)
chr2 (107-154)||(42768323-42768370)
chr2 (107-154)||(43195852-43195899)
chr2 (76-108)||(3976562-3976594)
chr2 (107-155)||(6183354-6183402)
chr2 (107-151)||(11969120-11969164)
chr2 (76-108)||(15820192-15820224)
chr2 (76-108)||(18901955-18901987)
chr2 (76-108)||(21213976-21214008)
chr2 (76-108)||(21214292-21214324)
chr2 (107-147)||(32667045-32667085)
chr2 (76-108)||(43169223-43169255)
[»] chr1 (28 HSPs)
chr1 (107-156)||(21638253-21638302)
chr1 (107-154)||(33879767-33879814)
chr1 (107-154)||(33964441-33964488)
chr1 (107-154)||(35926237-35926284)
chr1 (107-155)||(45403508-45403556)
chr1 (107-154)||(13959470-13959517)
chr1 (107-154)||(19481381-19481428)
chr1 (107-154)||(20735590-20735637)
chr1 (107-154)||(29273055-29273102)
chr1 (107-154)||(29273214-29273261)
chr1 (107-141)||(52923720-52923754)
chr1 (107-156)||(8520080-8520129)
chr1 (107-152)||(33342269-33342314)
chr1 (118-154)||(2997045-2997081)
chr1 (118-154)||(2997250-2997286)
chr1 (119-155)||(4022113-4022149)
chr1 (76-108)||(4022216-4022248)
chr1 (76-108)||(8520184-8520216)
chr1 (118-154)||(9380979-9381015)
chr1 (118-154)||(10017164-10017200)
chr1 (118-154)||(12314450-12314486)
chr1 (109-153)||(15392095-15392139)
chr1 (76-108)||(17419768-17419800)
chr1 (76-108)||(31305692-31305724)
chr1 (107-154)||(36331980-36332025)
chr1 (76-108)||(45264644-45264676)
chr1 (109-137)||(50765553-50765581)
chr1 (107-155)||(52846837-52846885)
[»] scaffold0054 (1 HSPs)
scaffold0054 (107-154)||(21252-21299)
[»] chr6 (25 HSPs)
chr6 (107-154)||(24558856-24558903)
chr6 (68-108)||(26809256-26809296)
chr6 (107-154)||(1744831-1744878)
chr6 (107-154)||(16876819-16876866)
chr6 (107-154)||(16876999-16877046)
chr6 (107-154)||(19291907-19291954)
chr6 (107-154)||(19712598-19712645)
chr6 (107-154)||(24055098-24055145)
chr6 (107-154)||(28149861-28149908)
chr6 (107-141)||(35236508-35236542)
chr6 (108-153)||(12124694-12124739)
chr6 (117-154)||(21089152-21089189)
chr6 (107-156)||(27914313-27914362)
chr6 (76-108)||(1408992-1409024)
chr6 (76-108)||(1744933-1744965)
chr6 (76-108)||(10418429-10418461)
chr6 (107-151)||(10733430-10733474)
chr6 (76-108)||(10733529-10733561)
chr6 (76-108)||(11160394-11160426)
chr6 (76-108)||(11198975-11199007)
chr6 (118-154)||(12134472-12134508)
chr6 (76-108)||(19054474-19054506)
chr6 (106-154)||(21067046-21067094)
chr6 (106-154)||(21088837-21088885)
chr6 (76-108)||(24055200-24055232)
[»] chr5 (34 HSPs)
chr5 (107-154)||(18914150-18914197)
chr5 (108-154)||(40168848-40168894)
chr5 (107-155)||(873684-873732)
chr5 (118-154)||(13844092-13844128)
chr5 (107-154)||(2908758-2908805)
chr5 (107-154)||(3762974-3763021)
chr5 (107-154)||(12965235-12965282)
chr5 (107-154)||(13413652-13413699)
chr5 (107-154)||(13843765-13843812)
chr5 (107-154)||(15287121-15287168)
chr5 (107-154)||(18914357-18914404)
chr5 (107-154)||(24994137-24994184)
chr5 (107-154)||(34457164-34457211)
chr5 (107-154)||(34457371-34457418)
chr5 (107-154)||(38131832-38131879)
chr5 (107-154)||(40169030-40169077)
chr5 (107-152)||(24918229-24918274)
chr5 (119-152)||(26246004-26246037)
chr5 (107-152)||(28358026-28358071)
chr5 (76-108)||(873787-873819)
chr5 (76-108)||(1028184-1028216)
chr5 (118-154)||(3015610-3015646)
chr5 (76-108)||(12595203-12595235)
chr5 (76-108)||(13843678-13843710)
chr5 (76-108)||(13843994-13844026)
chr5 (76-108)||(17016184-17016216)
chr5 (76-108)||(20811435-20811467)
chr5 (76-108)||(20837790-20837822)
chr5 (76-108)||(24918145-24918177)
chr5 (76-108)||(24994053-24994085)
chr5 (76-108)||(27760056-27760088)
chr5 (76-108)||(27760372-27760404)
chr5 (76-108)||(28010207-28010239)
chr5 (76-108)||(37995725-37995757)
[»] chr4 (34 HSPs)
chr4 (107-154)||(990615-990662)
chr4 (107-154)||(29113517-29113564)
chr4 (107-154)||(32987460-32987507)
chr4 (107-153)||(45426926-45426972)
chr4 (107-156)||(28395245-28395294)
chr4 (107-155)||(23018538-23018586)
chr4 (107-155)||(50858080-50858128)
chr4 (115-154)||(20545901-20545940)
chr4 (107-154)||(29669352-29669399)
chr4 (107-154)||(34205982-34206029)
chr4 (107-154)||(36558455-36558502)
chr4 (107-154)||(45427241-45427288)
chr4 (107-154)||(51470551-51470598)
chr4 (107-154)||(52214683-52214730)
chr4 (107-154)||(53740250-53740297)
chr4 (107-153)||(43972423-43972469)
chr4 (108-154)||(50858394-50858440)
chr4 (117-154)||(15664914-15664951)
chr4 (118-155)||(22865848-22865885)
chr4 (71-108)||(34206085-34206122)
chr4 (75-108)||(53739846-53739879)
chr4 (76-108)||(991185-991217)
chr4 (76-108)||(13254364-13254396)
chr4 (76-108)||(15665134-15665166)
chr4 (118-154)||(27048126-27048162)
chr4 (118-154)||(35645219-35645255)
chr4 (76-108)||(45427343-45427375)
chr4 (76-108)||(50857993-50858025)
chr4 (76-108)||(50858309-50858341)
chr4 (118-154)||(51470723-51470759)
chr4 (76-108)||(52214596-52214628)
chr4 (76-108)||(53738299-53738331)
chr4 (76-108)||(53740163-53740195)
chr4 (118-154)||(56511376-56511412)
[»] scaffold0989 (1 HSPs)
scaffold0989 (109-154)||(2936-2981)
[»] scaffold0060 (1 HSPs)
scaffold0060 (107-154)||(20608-20655)


Alignment Details
Target: chr3 (Bit Score: 149; Significance: 8e-79; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 62 - 234
Target Start/End: Complemental strand, 50095133 - 50094962
Alignment:
Q  62 cgtgccggcttgctttgtgttggctttgagggggtggagttagtcccttacaagttggttttgtaatgatgagttaggccctaaatttcaacacacttgt 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50095133 cgtgccggcttgctttgtgttggctttgagggggtggagttagtcccttacaagttggttttgtaatgatgagttagaccctaaatttcaacacacttgt 50095034  T
Q  162 gaattagtgtagccactaatttcatctaaataatatttttctatcaaacacaggtttttgccttgtatgactc 234  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||    
T  50095033 gaattagagtagccactaatttcatctagataatatttttctatc-aacacgggtttttgccttgtatgactc 50094962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 50095239 - 50095175
Alignment:
Q  1 atattcatttcctggattaatattcattggttgtgcttgttgttggaaatcctgcccataacgtg 65  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  50095239 atattcatttcctggatcaatattcattggttgtgcttgttgttggaaatcttgcccataacgtg 50095175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 25627956 - 25627908
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  25627956 ccttacaagttggttttgtaaggatgagttaggccccaaattccaacac 25627908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 22339809 - 22339857
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||||| |||||||||| ||||||||||||||  |||||||||||    
T  22339809 ccttacaagtcggttttgtaaggatgagttaggcccccaatttcaacac 22339857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 51642464 - 51642416
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||||||    
T  51642464 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaacac 51642416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 9264122 - 9264075
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  9264122 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 9264075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 9264329 - 9264282
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  9264329 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 9264282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 22407477 - 22407430
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  22407477 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 22407430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 22407684 - 22407637
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  22407684 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 22407637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 44573707 - 44573754
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  44573707 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 44573754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 44574004 - 44574051
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  44574004 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 44574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 47833689 - 47833642
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| ||||||||||| ||||| |||||||| |||||||||||    
T  47833689 ccttacaagctggttttgtaaggatgatttaggccccaaatttcaaca 47833642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 50692391 - 50692438
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  50692391 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 50692438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 50692594 - 50692641
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  50692594 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 50692641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 51338439 - 51338392
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  51338439 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 51338392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 51642671 - 51642624
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  51642671 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 51642624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 145
Target Start/End: Original strand, 9179201 - 9179239
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaa 145  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  9179201 ccttacaagtcggttttgtaaggatgagttaggccctaa 9179239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 13769327 - 13769285
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaattt 149  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||    
T  13769327 ccttacaagctggttttgtaaggatgagttaggccccaaattt 13769285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 4191158 - 4191113
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaa 152  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||    
T  4191158 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 4191113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 4255989 - 4256034
Alignment:
Q  109 ttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||  |||||||||| |||||||||||||| |||||||||||    
T  4255989 ttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 4256034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 5440685 - 5440730
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaa 152  Q
    ||||||||| ||||||||||| |||||||||| |||| ||||||||    
T  5440685 ccttacaagctggttttgtaaggatgagttagaccctcaatttcaa 5440730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 155
Target Start/End: Complemental strand, 21832224 - 21832187
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  21832224 ggttttgtaaggatgagttaggccccaaatttcaacac 21832187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 155
Target Start/End: Complemental strand, 50203882 - 50203845
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  50203882 ggttttgtaaggatgagttaggccccaaatttcaacac 50203845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 4029669 - 4029633
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  4029669 ggttttgtaaggatgagttaggccccaaatttcaaca 4029633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 4255491 - 4255523
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  4255491 ttgtgttggctttgagggggtggatttagtccc 4255523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 4256215 - 4256247
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  4256215 ttgtgttggctttgagggggtggatttagtccc 4256247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 13769414 - 13769382
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  13769414 ttgtgttggctttgagggggtggatttagtccc 13769382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 35011736 - 35011772
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  35011736 ggttttgtaaggatgagttaggccccaaatttcaaca 35011772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 35011943 - 35011979
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  35011943 ggttttgtaaggatgagttaggccccaaatttcaaca 35011979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 37058796 - 37058760
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  37058796 ggttttgtaaggatgagttaggcccaaaatttcaaca 37058760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 41380705 - 41380737
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  41380705 ttgtgttggctttgagggggtggatttagtccc 41380737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 43101407 - 43101359
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||| | |||||||||| |||||||| ||||| ||||||||||||    
T  43101407 ccttacaaatcggttttgtaaggatgagtttggccccaaatttcaacac 43101359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 43101494 - 43101462
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  43101494 ttgtgttggctttgagggggtggatttagtccc 43101462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 44573307 - 44573339
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  44573307 ttgtgttggctttgagggggtggatttagtccc 44573339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 44573405 - 44573441
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||||| |||||||||    
T  44573405 ggttttgtaaggatgagttaggccctagatttcaaca 44573441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 44573620 - 44573652
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  44573620 ttgtgttggctttgagggggtggatttagtccc 44573652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 45443261 - 45443293
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  45443261 ttgtgttggctttgagggggtggatttagtccc 45443293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 48685337 - 48685301
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  48685337 ggttttgtaaggatgagttaggccccaaatttcaaca 48685301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 54369020 - 54369052
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  54369020 ttgtgttggctttgagggggtggatttagtccc 54369052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 20298552 - 20298504
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  20298552 ccttacaagctggttttgtaatgatgagttaggccccaaatttcaacac 20298504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 21085184 - 21085136
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  21085184 ccttacaagctggttttgtaatgatgagttaggccccaaatttcaacac 21085136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 36994063 - 36994023
Alignment:
Q  68 ggcttgctttgtgttggctttgagggggtggagttagtccc 108  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  36994063 ggcttgccttgtgttggctttgagggggtggatttagtccc 36994023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 3183947 - 3183900
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  3183947 ccttacaagccggttttgtaacgatgagttaggccccaaatttcaaca 3183900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 7621962 - 7622009
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||| |||||| |||||||| |||||||||||||| |||||||||||    
T  7621962 ccttataagttgattttgtaaggatgagttaggccccaaatttcaaca 7622009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 10989070 - 10989023
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  10989070 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 10989023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 10989277 - 10989230
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  10989277 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 10989230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 16454671 - 16454624
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  16454671 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 16454624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 18905924 - 18905971
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  18905924 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 18905971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 32931469 - 32931516
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  32931469 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 32931516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 36997234 - 36997281
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  36997234 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 36997281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 43599379 - 43599426
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  43599379 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 43599426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 33435748 - 33435794
Alignment:
Q  108 cttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| |||||||||| |||||||||| ||| |||||||||||    
T  33435748 cttacaagtcggttttgtaaggatgagttagaccccaaatttcaaca 33435794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 40754513 - 40754559
Alignment:
Q  108 cttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||| ||||||||||| ||| |||||||||| |||||||||||    
T  40754513 cttacaagctggttttgtaaagataagttaggccccaaatttcaaca 40754559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 30066060 - 30066097
Alignment:
Q  117 tggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  30066060 tggttttgtaaggatgagttaggccccaaatttcaaca 30066097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 34248335 - 34248372
Alignment:
Q  71 ttgctttgtgttggctttgagggggtggagttagtccc 108  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  34248335 ttgccttgtgttggctttgagggggtggatttagtccc 34248372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 43599550 - 43599587
Alignment:
Q  117 tggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  43599550 tggttttgtaaggatgagttaggccccaaatttcaaca 43599587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 18905837 - 18905869
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  18905837 ttgtgttggctttgagggggtggatttagtccc 18905869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 20298639 - 20298607
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  20298639 ttgtgttggctttgagggggtggatttagtccc 20298607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 20760685 - 20760649
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  20760685 ggttttgtaaggatgagttaggccccaaatttcaaca 20760649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 21085271 - 21085239
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  21085271 ttgtgttggctttgagggggtggatttagtccc 21085239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 23027628 - 23027596
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  23027628 ttgtgttggctttgagggggtggatttagtccc 23027596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 23027951 - 23027919
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  23027951 ttgtgttggctttgagggggtggatttagtccc 23027919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 27402244 - 27402204
Alignment:
Q  68 ggcttgctttgtgttggctttgagggggtggagttagtccc 108  Q
    ||||||| |||||||||||||||||||||||| ||| ||||    
T  27402244 ggcttgccttgtgttggctttgagggggtggatttaatccc 27402204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 31766982 - 31767014
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  31766982 ttgtgttggctttgagggggtggatttagtccc 31767014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 36997147 - 36997179
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  36997147 ttgtgttggctttgagggggtggaattagtccc 36997179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 43984341 - 43984305
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  43984341 ggttttgtaaggatgagttaggccccaaatttcaaca 43984305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 23821712 - 23821665
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  23821712 ccttacaagttggttttgtaaggatgagttaggccccaaatttcaaca 23821665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 258501 - 258544
Alignment:
Q  111 acaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||    
T  258501 acaagctggttttgtgatgatgagttaggccccaaatttcaaca 258544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 1663640 - 1663593
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  1663640 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 1663593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 6783106 - 6783153
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  6783106 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 6783153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 8585159 - 8585206
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| ||||||||||| |||||||||| ||| |||||||||||    
T  8585159 ccttacaagctggttttgtaaggatgagttagaccccaaatttcaaca 8585206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 23396677 - 23396724
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  23396677 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 23396724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 41670901 - 41670948
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  41670901 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 41670948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 5775952 - 5775997
Alignment:
Q  109 ttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||| | ||||||| ||||||||||| ||||||||||||||||    
T  5775952 ttacaagctagttttgtgatgatgagttaagccctaaatttcaaca 5775997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 29780215 - 29780260
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaa 152  Q
    |||||||||| |||||| ||| |||||||||||||| |||||||||    
T  29780215 ccttacaagtcggttttataaggatgagttaggccccaaatttcaa 29780260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 257390 - 257358
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  257390 ttgtgttggctttgagggggtggatttagtccc 257358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 13310450 - 13310414
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  13310450 ggttttgtaaggatgagttaggccccaaatttcaaca 13310414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 28910013 - 28910045
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  28910013 ttgtgttggctttgagggggtggatttagtccc 28910045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 34027779 - 34027734
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||||||||||| ||| ||||||||||||||  ||||||||||    
T  34027779 ccttacaagttggttttataaggatgagttaggccc--aatttcaaca 34027734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 41670849 - 41670881
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  41670849 ttgtgttggctttgagggggtggatttagtccc 41670881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 41709999 - 41710031
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  41709999 ttgtgttggctttgagggggtggatttagtccc 41710031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 43168016 - 43167984
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  43168016 ttgtgttggctttgagggggtggatttagtccc 43167984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 31761200 - 31761247
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  31761200 ccttacaagttggttttgtaaggatgagttaggccccaaatttcaaca 31761247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 10849527 - 10849485
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaattt 149  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  10849527 ccttacaagttggttttgtaaggatgagttaggccccaaattt 10849485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 23054394 - 23054442
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||||||    
T  23054394 ccttacaagacggttttgtaaggatgagttaggccccaaatttcaacac 23054442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 21214237 - 21214190
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  21214237 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 21214190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 32667251 - 32667298
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  32667251 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 32667298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 33985807 - 33985760
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  33985807 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 33985760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 42768370 - 42768323
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  42768370 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 42768323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 43195852 - 43195899
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  43195852 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 43195899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 3976594 - 3976562
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  3976594 ttgtgttggctttgagggggtggatttagtccc 3976562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 6183402 - 6183354
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||||  |||||||||| |||||||||| ||| ||||||||||||    
T  6183402 ccttacaagccggttttgtaaggatgagttagaccccaaatttcaacac 6183354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 11969120 - 11969164
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttca 151  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||    
T  11969120 ccttacaagccggttttgtaaggatgagttaggcccaaaatttca 11969164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 15820224 - 15820192
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  15820224 ttgtgttggctttgagggggtggatttagtccc 15820192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 18901987 - 18901955
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  18901987 ttgtgttggctttgagggggtggatttagtccc 18901955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 21214008 - 21213976
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  21214008 ttgtgttggctttgagggggtggatttagtccc 21213976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 21214324 - 21214292
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  21214324 ttgtgttggctttgagggggtggatttagtccc 21214292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 32667045 - 32667085
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaat 147  Q
    |||||||||  ||||||||||||||||||||||||| ||||    
T  32667045 ccttacaagccggttttgtaatgatgagttaggccccaaat 32667085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 43169223 - 43169255
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  43169223 ttgtgttggctttgagggggtggatttagtccc 43169255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 21638302 - 21638253
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacaca 156  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||||||    
T  21638302 ccttacaagatggttttgtaaggatgagttaggccccaaatttcaacaca 21638253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 33879814 - 33879767
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  33879814 ccttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 33879767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 33964441 - 33964488
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  33964441 ccttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 33964488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 35926284 - 35926237
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  35926284 ccttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 35926237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 45403508 - 45403556
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    ||||||||| ||||||||||| |||||||||||||  ||||||||||||    
T  45403508 ccttacaagctggttttgtaaggatgagttaggcctcaaatttcaacac 45403556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 13959470 - 13959517
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| ||||||| ||| |||||||||||||| |||||||||||    
T  13959470 ccttacaagctggttttttaaggatgagttaggccccaaatttcaaca 13959517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 19481428 - 19481381
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  19481428 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 19481381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 20735590 - 20735637
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  20735590 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 20735637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 29273102 - 29273055
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  29273102 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 29273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 29273261 - 29273214
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  29273261 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 29273214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 52923754 - 52923720
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggcc 141  Q
    ||||||||||||||||||||||||| |||||||||    
T  52923754 ccttacaagttggttttgtaatgattagttaggcc 52923720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 8520129 - 8520080
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacaca 156  Q
    |||||||||  |||||||||| |||||||||| ||| |||||||||||||    
T  8520129 ccttacaagccggttttgtaaagatgagttagaccccaaatttcaacaca 8520080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 33342314 - 33342269
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaa 152  Q
    |||||||||  |||||||||| |||||||||| |||||||||||||    
T  33342314 ccttacaagccggttttgtaaggatgagttagaccctaaatttcaa 33342269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 2997081 - 2997045
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  2997081 ggttttgtaaggatgagttaggccccaaatttcaaca 2997045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 2997286 - 2997250
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  2997286 ggttttgtaaagatgagttaggccccaaatttcaaca 2997250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 4022149 - 4022113
Alignment:
Q  119 gttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  4022149 gttttgtaaggatgagttaggccccaaatttcaacac 4022113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 4022248 - 4022216
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  4022248 ttgtgttggctttgagggggtggatttagtccc 4022216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 8520216 - 8520184
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  8520216 ttgtgttggctttgagggggtggatttagtccc 8520184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 9380979 - 9381015
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  9380979 ggttttgtaaggatgagttaggccccaaatttcaaca 9381015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 10017200 - 10017164
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  ||||||||||||||||||||||||||    
T  10017200 ggttttgtacggatgagttaggccctaaatttcaaca 10017164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 12314450 - 12314486
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  12314450 ggttttgtaaggatgagttaggccctgaatttcaaca 12314486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 15392095 - 15392139
Alignment:
Q  109 ttacaagttggttttgtaatgatgagttaggccctaaatttcaac 153  Q
    |||||||  |||||||||| |||||||||||||| ||||||||||    
T  15392095 ttacaagccggttttgtaaggatgagttaggccccaaatttcaac 15392139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 17419768 - 17419800
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  17419768 ttgtgttggctttgagggggtggatttagtccc 17419800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 31305692 - 31305724
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  31305692 ttgtgttggctttgagggggtggatttagtccc 31305724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 36331980 - 36332025
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||  ||||||||||||||||||||||||||  ||||||||||    
T  36331980 ccttacaaactggttttgtaatgatgagttaggccc--aatttcaaca 36332025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 45264644 - 45264676
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  45264644 ttgtgttggctttgagggggtggatttagtccc 45264676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 137
Target Start/End: Original strand, 50765553 - 50765581
Alignment:
Q  109 ttacaagttggttttgtaatgatgagtta 137  Q
    |||||||||||||||||||||||||||||    
T  50765553 ttacaagttggttttgtaatgatgagtta 50765581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 52846885 - 52846837
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||||  |||||||||| ||||||||| |||| ||||||||||||    
T  52846885 ccttacaagccggttttgtaaggatgagttaagccccaaatttcaacac 52846837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 21299 - 21252
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||    
T  21299 ccttacaagttggttttgtaaggatgagttaggcctcaaatttcaaca 21252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 24558856 - 24558903
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  24558856 ccttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 24558903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 26809296 - 26809256
Alignment:
Q  68 ggcttgctttgtgttggctttgagggggtggagttagtccc 108  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  26809296 ggcttgccttgtgttggctttgagggggtggatttagtccc 26809256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 1744878 - 1744831
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  1744878 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 1744831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 16876866 - 16876819
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  16876866 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 16876819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 16877046 - 16876999
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  16877046 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 16876999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 19291954 - 19291907
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||| ||||||||||||||| |||||||||||| | |||||||||||    
T  19291954 ccttataagttggttttgtaaggatgagttaggctccaaatttcaaca 19291907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 19712645 - 19712598
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| ||||||||||| |||||||||||||| ||||| |||||    
T  19712645 ccttacaagctggttttgtaaggatgagttaggccccaaattacaaca 19712598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 24055145 - 24055098
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  24055145 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 24055098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 28149861 - 28149908
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  28149861 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 28149908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 35236542 - 35236508
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggcc 141  Q
    ||||||||||||||||||||||||| |||||||||    
T  35236542 ccttacaagttggttttgtaatgattagttaggcc 35236508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 12124739 - 12124694
Alignment:
Q  108 cttacaagttggttttgtaatgatgagttaggccctaaatttcaac 153  Q
    |||||||| || |||||||| |||||||||||||| ||||||||||    
T  12124739 cttacaagctgattttgtaaggatgagttaggccccaaatttcaac 12124694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 21089189 - 21089152
Alignment:
Q  117 tggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  21089189 tggttttgtaaggatgagttaggccccaaatttcaaca 21089152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 27914362 - 27914313
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacaca 156  Q
    |||||||||  |||||||||| |||||||||||||| ||||||| |||||    
T  27914362 ccttacaagccggttttgtaaggatgagttaggccccaaatttctacaca 27914313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 1408992 - 1409024
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  1408992 ttgtgttggctttgagggggtggatttagtccc 1409024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 1744965 - 1744933
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    ||||||| |||||||||||||||||||||||||    
T  1744965 ttgtgtttgctttgagggggtggagttagtccc 1744933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 10418461 - 10418429
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  10418461 ttgtgttggctttgagggggtggatttagtccc 10418429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 10733474 - 10733430
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttca 151  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||    
T  10733474 ccttacaagccggttttgtaaggatgagttaggccccaaatttca 10733430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 10733561 - 10733529
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  10733561 ttgtgttggctttgagggggtggatttagtccc 10733529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 11160394 - 11160426
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  11160394 ttgtgttggctttgagggggtggatttagtccc 11160426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 11198975 - 11199007
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  11198975 ttgtgttggctttgagggggtggatttagtccc 11199007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 12134508 - 12134472
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  12134508 ggttttgtaaggatgagttaggccccaaatttcaaca 12134472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 19054474 - 19054506
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  19054474 ttgtgttggctttgagggggtggaattagtccc 19054506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 21067094 - 21067046
Alignment:
Q  106 cccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||||  |||||||||| |||| ||||||||| |||||||||||    
T  21067094 cccttacaagccggttttgtaaagatgtgttaggccccaaatttcaaca 21067046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 21088885 - 21088837
Alignment:
Q  106 cccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||||  |||||||||| |||| ||||||||| |||||||||||    
T  21088885 cccttacaagccggttttgtaaagatgtgttaggccccaaatttcaaca 21088837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 24055232 - 24055200
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  24055232 ttgtgttggctttgagggggtggatttagtccc 24055200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 18914197 - 18914150
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||    
T  18914197 ccttacaagttggttttgtaagaatgagttaggccccaaatttcaaca 18914150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 40168894 - 40168848
Alignment:
Q  108 cttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||||    
T  40168894 cttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 40168848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 873732 - 873684
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||||||    
T  873732 ccttacaagcaggttttgtaaggatgagttaggccccaaatttcaacac 873684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 13844092 - 13844128
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| ||||||||||||||||||||||||||    
T  13844092 ggttttgtaaggatgagttaggccctaaatttcaaca 13844128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 2908805 - 2908758
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  2908805 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 2908758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 3762974 - 3763021
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  3762974 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 3763021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 12965282 - 12965235
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  12965282 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 12965235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 13413652 - 13413699
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  13413652 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 13413699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 13843765 - 13843812
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  13843765 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 13843812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 15287121 - 15287168
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  ||||||||||||||||||||| ||| |||||||||||    
T  15287121 ccttacaagccggttttgtaatgatgagttagacccaaaatttcaaca 15287168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 18914404 - 18914357
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| |||||||||||  ||||||||||||| |||||||||||    
T  18914404 ccttacaagctggttttgtaagaatgagttaggccccaaatttcaaca 18914357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 24994137 - 24994184
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  24994137 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 24994184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 34457164 - 34457211
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  34457164 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 34457211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 34457371 - 34457418
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  34457371 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 34457418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 38131832 - 38131879
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  38131832 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 38131879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 40169077 - 40169030
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  40169077 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 40169030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 24918229 - 24918274
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaa 152  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||    
T  24918229 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 24918274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 26246004 - 26246037
Alignment:
Q  119 gttttgtaatgatgagttaggccctaaatttcaa 152  Q
    ||||||||| ||||||||||||||||||||||||    
T  26246004 gttttgtaaggatgagttaggccctaaatttcaa 26246037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 28358071 - 28358026
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaa 152  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||    
T  28358071 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 28358026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 873819 - 873787
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  873819 ttgtgttggctttgagggggtggatttagtccc 873787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 1028216 - 1028184
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  1028216 ttgtgttggctttgagggggtggatttagtccc 1028184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 3015646 - 3015610
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| | ||||||||||||||||||||||||    
T  3015646 ggttttgtaaggttgagttaggccctaaatttcaaca 3015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 12595235 - 12595203
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  12595235 ttgtgttggctttgagggggtggatttagtccc 12595203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 13843678 - 13843710
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  13843678 ttgtgttggctttgagggggtggatttagtccc 13843710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 13843994 - 13844026
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  13843994 ttgtgttggctttgagggggtggatttagtccc 13844026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 17016216 - 17016184
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  17016216 ttgtgttggctttgagggggtggatttagtccc 17016184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 20811435 - 20811467
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  20811435 ttgtgttggctttgagggggtggatttagtccc 20811467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 20837790 - 20837822
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  20837790 ttgtgttggctttgagggggtggatttagtccc 20837822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 24918145 - 24918177
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  24918145 ttgtgttggctttgagggggtggatttagtccc 24918177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 24994053 - 24994085
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  24994053 ttgtgttggctttgagggggtggatttagtccc 24994085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 27760056 - 27760088
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  27760056 ttgtgttggctttgagggggtggatttagtccc 27760088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 27760372 - 27760404
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  27760372 ttgtgttggctttgagggggtggatttagtccc 27760404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 28010239 - 28010207
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  28010239 ttgtgttggctttgagggggtggatttagtccc 28010207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 37995757 - 37995725
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  37995757 ttgtgttggctttgagggggtggatttagtccc 37995725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 990615 - 990662
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||||    
T  990615 ccttacaagtcggttttgtaaggatgagttaggccccaaatttcaaca 990662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 29113517 - 29113564
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  29113517 ccttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 29113564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 32987507 - 32987460
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  32987507 ccttacaagtcggttttgtaaggatgatttaggccctaaatttcaaca 32987460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 45426972 - 45426926
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaac 153  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||    
T  45426972 ccttacaagtcggttttgtaaggatgagttaggccccaaatttcaac 45426926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 28395245 - 28395294
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacaca 156  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||||    
T  28395245 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaacaca 28395294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 23018538 - 23018586
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||||||    
T  23018538 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaacac 23018586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 50858080 - 50858128
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||||||    
T  50858080 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaacac 50858128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 154
Target Start/End: Complemental strand, 20545940 - 20545901
Alignment:
Q  115 gttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  20545940 gttgattttgtaatgatgagttaggccccaaatttcaaca 20545901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 29669399 - 29669352
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  29669399 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 29669352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 34206029 - 34205982
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| ||||||||||| ||||||||||| || |||||||||||    
T  34206029 ccttacaagctggttttgtaaggatgagttaggtcccaaatttcaaca 34205982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 36558502 - 36558455
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  36558502 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 36558455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 45427288 - 45427241
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  45427288 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 45427241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 51470551 - 51470598
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  51470551 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 51470598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 52214683 - 52214730
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  52214683 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 52214730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 53740250 - 53740297
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  53740250 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 53740297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 43972423 - 43972469
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaac 153  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||||    
T  43972423 ccttacaagccggttttgtaaggatgagttaggccccaaatttcaac 43972469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 50858394 - 50858440
Alignment:
Q  108 cttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||  |||||||||| |||||||||||||| |||||||||||    
T  50858394 cttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 50858440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 15664914 - 15664951
Alignment:
Q  117 tggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  15664914 tggttttgtaacgatgagttaggccccaaatttcaaca 15664951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 22865848 - 22865885
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaacac 155  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  22865848 ggttttgtaaggatgagttagaccctaaatttcaacac 22865885  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 34206122 - 34206085
Alignment:
Q  71 ttgctttgtgttggctttgagggggtggagttagtccc 108  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  34206122 ttgccttgtgttggctttgagggggtggatttagtccc 34206085  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 53739846 - 53739879
Alignment:
Q  75 tttgtgttggctttgagggggtggagttagtccc 108  Q
    ||||||||||||||||||||||||| ||||||||    
T  53739846 tttgtgttggctttgagggggtggatttagtccc 53739879  T

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Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 991185 - 991217
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  991185 ttgtgttggctttgagggggtggatttagtccc 991217  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 13254364 - 13254396
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  13254364 ttgtgttggctttgagggggtggatttagtccc 13254396  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 15665134 - 15665166
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  15665134 ttgtgttggctttgagggggtggatttagtccc 15665166  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 27048162 - 27048126
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  27048162 ggttttgtaaggatgagttaggccccaaatttcaaca 27048126  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 35645255 - 35645219
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||| |||||||||||||||| |||||||||||    
T  35645255 ggttttgtgatgatgagttaggccccaaatttcaaca 35645219  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 45427375 - 45427343
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  45427375 ttgtgttggctttgagggggtggatttagtccc 45427343  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 50857993 - 50858025
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  50857993 ttgtgttggctttgagggggtggatttagtccc 50858025  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 50858309 - 50858341
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  50858309 ttgtgttggctttgagggggtggatttagtccc 50858341  T

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Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 51470723 - 51470759
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  51470723 ggttttgtaaggatgagttaggccccaaatttcaaca 51470759  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 52214596 - 52214628
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  52214596 ttgtgttggctttgagggggtggaattagtccc 52214628  T

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Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 53738331 - 53738299
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  53738331 ttgtgttggctttgagggggtggatttagtccc 53738299  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 53740163 - 53740195
Alignment:
Q  76 ttgtgttggctttgagggggtggagttagtccc 108  Q
    |||||||||||||||||||||||| ||||||||    
T  53740163 ttgtgttggctttgagggggtggatttagtccc 53740195  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 56511376 - 56511412
Alignment:
Q  118 ggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    |||||||||| |||||||||||||| |||||||||||    
T  56511376 ggttttgtaaggatgagttaggccccaaatttcaaca 56511412  T

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Target: scaffold0989 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 2981 - 2936
Alignment:
Q  109 ttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||    
T  2981 ttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 2936  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 20608 - 20655
Alignment:
Q  107 ccttacaagttggttttgtaatgatgagttaggccctaaatttcaaca 154  Q
    ||||||||| ||||||||||| |||||||||||||| ||||| |||||    
T  20608 ccttacaagctggttttgtaaggatgagttaggccccaaattacaaca 20655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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