View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19645_high_26 (Length: 307)

Name: NF19645_high_26
Description: NF19645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19645_high_26
NF19645_high_26
[»] chr2 (1 HSPs)
chr2 (14-307)||(22155012-22155305)


Alignment Details
Target: chr2 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 14 - 307
Target Start/End: Original strand, 22155012 - 22155305
Alignment:
Q  14 agataatcagaagcgacgagagggtcttgatgaagaagtagtccaggatccacgatcaacacgtctggctagcatcagacaacaccctgatgaaaatgag 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22155012 agataatcagaagcgacgagagggtcttgatgaagaagtagtccaggatccacgatcaacacgtctggctagcatcagacaacaccctgatgaaaatgag 22155111  T
Q  114 cagggattctatagaaaagagcatgatggaaagcaagatcccgaaagaaatcacatggtacttagaggtagagatggatcatacccttacaaggaccggc 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22155112 cagggattctatagaaaagagcatgatggaaagcaagatcccgaaagaaatcacatggtacttagaggtagagagggatcatacccttacaaggaccggc 22155211  T
Q  214 atcgtagcttggcccatcaattgcatacaaatactgacggatttgataggcaaaaagatagggacagttctgacatggattgggcaaggagaga 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22155212 atcgtagcttggcccatcaattgcatacaaatactgacggatttgataggcaaaaagatagggacagttctgacatggattgggcaaggagaga 22155305  T

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