View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19645_high_8 (Length: 352)
Name: NF19645_high_8
Description: NF19645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19645_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 3 - 343
Target Start/End: Complemental strand, 11397616 - 11397265
Alignment:
| Q |
3 |
taggtagagaatcaaagaggaggtgacagccatacaaaatttggtaaaatgtactgagaaaattgatgacatgaattcaaattgtcaatgaagaattaat |
102 |
Q |
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| T |
11397616 |
taggtagagaatcaaagaggaggtgacagccatacaaaatttggtaaaatgtactgagaaaattgatgacatgaattcaaattgtcaatgaagaattaat |
11397517 |
T |
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| Q |
103 |
gcaagaactaaattttttccaaagatcc-----------aatattaagtacttatgttgattgttatagatacaacttgcataaactatttttagaatgt |
191 |
Q |
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| T |
11397516 |
gcaagaactaaattttttccaaagatcctgttactacctaatattaagtacttatgttgattgttatagatacaacttgcataaactattttcacaatgt |
11397417 |
T |
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| Q |
192 |
tggtcacttactctccaagtgcatttcctttgttcctttgtttacttgcattacgtcactttgaacagaatccatgatcattgcaaacctgctcaatgag |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11397416 |
tggtcacttactctccaagtgcatttcctttgttcctttgtttacttgcattacgtcactttgaacagaatccatgatcattgcaaacctgctcaatgag |
11397317 |
T |
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| Q |
292 |
gtttccattatgccaattctgttttcgagtccttcacttaactgatctgtgg |
343 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11397316 |
gtttccattatgccaattctgttttcgagtccttcacttaactgatctgtgg |
11397265 |
T |
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