View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19651_low_13 (Length: 304)
Name: NF19651_low_13
Description: NF19651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19651_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 10653314 - 10653232
Alignment:
| Q |
120 |
gggtagatctaaggagatttaatctgttaatgaaataacattaaaaatttgtcttgaaaaatgatgtatttaatctaagtcaa |
202 |
Q |
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| T |
10653314 |
gggtagatctaaggagatttaatctgttaatgaaataacattaaaaatttgtcttgaaaaatgatgtatttaatctaagtcaa |
10653232 |
T |
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Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 10653411 - 10653366
Alignment:
| Q |
23 |
aaaagagaaaatatacaagtggtgaaggtgtaaaccatacccattg |
68 |
Q |
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| T |
10653411 |
aaaaaagaaaatatacaagtggtgaaggtgtaaaccatacccattg |
10653366 |
T |
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