View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19651_low_29 (Length: 221)
Name: NF19651_low_29
Description: NF19651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19651_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 49 - 206
Target Start/End: Complemental strand, 36954406 - 36954249
Alignment:
| Q |
49 |
taacaatatcaatatataatcactaggcttgggaagaaaattttcatatcatattctaaataactggcatcagacgatatacttaccatctgcagaaggt |
148 |
Q |
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| T |
36954406 |
taacaatatcaatatataatcactaggcttgggaagaaaattttcatatcatattctaaataactggcatcagacgatatacttaccatctgcagaaggt |
36954307 |
T |
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| Q |
149 |
aaactaaactgacgctgtattgatccaggaggttcaactaacgcctttagattctctg |
206 |
Q |
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||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
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| T |
36954306 |
aaactaaactgacgctgtattgatccaggaggttcgaccaacgcctttagattctctg |
36954249 |
T |
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