View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19657_high_12 (Length: 317)
Name: NF19657_high_12
Description: NF19657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19657_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 17 - 305
Target Start/End: Complemental strand, 43709423 - 43709134
Alignment:
| Q |
17 |
ataagcaacaaaattatatcaaactaaattactaaattcaaccttgtcgtatatatgtttggcaaagaaaaatgcatgccagaataactaaaaagtgaac |
116 |
Q |
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| T |
43709423 |
ataagcaacaaaattatatcaaactaaattactaaattcaaccttgtcgtatatatgtttggcaaagaaaaatgcatgccataataactaaaaagtgaac |
43709324 |
T |
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| Q |
117 |
cttttcatccacaaaaaactatttacagttgtaactttcaa-gttatgaacaagagataaaaacaaatggtaatttaaaaagactaattaaattattcta |
215 |
Q |
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| T |
43709323 |
cttttcatccacaaaaaactatttacagttgtaacttccaaggttatgaacaagagataaaaacaaatggtaatttaaaaagactaattaaattattcta |
43709224 |
T |
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| Q |
216 |
tgattgaannnnnnngtgatagcctctttctggtctccatcatggcgtcgtgtcttcttttgcataaatctttcattgcctcttgatatt |
305 |
Q |
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| T |
43709223 |
tgattgaatttttttgtgatagcctctttctggtctccatcatggcgtcgtgtcttcttttgcataaatctttcattgcctcttgatatt |
43709134 |
T |
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