View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19658_high_113 (Length: 210)
Name: NF19658_high_113
Description: NF19658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19658_high_113 |
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Alignment Details
Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 8422857 - 8423035
Alignment:
| Q |
14 |
catcacctaaaatatatttatagannnnnnnncgaagatccaacataaaaacttcaacaaaaccataaa-tacttaacatttattcattcatcatcaatg |
112 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
8422857 |
catcacctaaaatatatttatagattttttttcgaagatccaacataaaaacttcaacaaaaccataaagtacttaacatttattcattcatcatcaatg |
8422956 |
T |
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| Q |
113 |
gaaaagtttcataaagaaatcatgtgctagattcctactcaacaatcttaccaatccacctttttacaacagtaaggac |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8422957 |
gaaaagtttcataaagaaatcatgtgctagattcctactcaacaatcttaccaatccacctttttacaacagtaaggac |
8423035 |
T |
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