View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19658_high_22 (Length: 515)

Name: NF19658_high_22
Description: NF19658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19658_high_22
NF19658_high_22
[»] chr1 (36 HSPs)
chr1 (11-296)||(49900762-49901042)
chr1 (350-501)||(49901096-49901247)
chr1 (11-152)||(29567901-29568041)
chr1 (11-151)||(27208995-27209134)
chr1 (11-156)||(44108600-44108747)
chr1 (59-164)||(51244890-51244994)
chr1 (11-156)||(7191212-7191357)
chr1 (56-156)||(46554799-46554899)
chr1 (56-173)||(25487072-25487189)
chr1 (56-174)||(10842763-10842882)
chr1 (11-156)||(26595075-26595219)
chr1 (82-164)||(24884408-24884490)
chr1 (17-174)||(24611530-24611688)
chr1 (11-156)||(9915444-9915589)
chr1 (11-156)||(15823035-15823180)
chr1 (18-174)||(31798572-31798729)
chr1 (11-152)||(49468716-49468857)
chr1 (32-164)||(33622391-33622523)
chr1 (82-156)||(1740717-1740791)
chr1 (56-145)||(16757244-16757333)
chr1 (11-152)||(50094234-50094376)
chr1 (56-140)||(2610880-2610964)
chr1 (11-164)||(8895021-8895173)
chr1 (11-156)||(18794548-18794691)
chr1 (82-158)||(27720957-27721033)
chr1 (82-146)||(35848009-35848073)
chr1 (18-112)||(31699302-31699395)
chr1 (56-156)||(39477758-39477857)
chr1 (74-156)||(44557112-44557194)
chr1 (11-48)||(9092700-9092737)
chr1 (80-164)||(14373487-14373571)
chr1 (56-152)||(26755225-26755321)
chr1 (56-152)||(50249315-50249411)
chr1 (11-151)||(52125141-52125281)
chr1 (104-152)||(15573612-15573659)
chr1 (56-112)||(25560922-25560978)
[»] chr4 (45 HSPs)
chr4 (11-164)||(45839630-45839783)
chr4 (11-152)||(34413558-34413699)
chr4 (11-174)||(29370586-29370749)
chr4 (18-156)||(50203077-50203212)
chr4 (11-163)||(34316216-34316368)
chr4 (11-152)||(30261264-30261404)
chr4 (11-164)||(6991274-6991425)
chr4 (18-140)||(47817755-47817877)
chr4 (18-152)||(49080495-49080628)
chr4 (18-156)||(8971043-8971181)
chr4 (59-152)||(19903895-19903988)
chr4 (68-165)||(41496197-41496294)
chr4 (18-156)||(44571883-44572021)
chr4 (11-152)||(1819567-1819708)
chr4 (11-156)||(41920320-41920465)
chr4 (17-112)||(44868269-44868363)
chr4 (11-156)||(45043599-45043744)
chr4 (11-152)||(52957801-52957942)
chr4 (11-152)||(10573166-10573306)
chr4 (56-152)||(29519580-29519677)
chr4 (11-112)||(620187-620289)
chr4 (11-152)||(19878653-19878794)
chr4 (11-152)||(53814508-53814649)
chr4 (11-156)||(27653677-27653820)
chr4 (63-152)||(27943608-27943698)
chr4 (56-112)||(47458441-47458497)
chr4 (11-152)||(49089469-49089609)
chr4 (18-150)||(42605580-42605711)
chr4 (56-159)||(52162104-52162205)
chr4 (11-156)||(50623084-50623230)
chr4 (56-164)||(56373630-56373741)
chr4 (11-152)||(20448044-20448185)
chr4 (56-152)||(25123782-25123878)
chr4 (11-48)||(39984926-39984963)
chr4 (56-164)||(46392118-46392225)
chr4 (11-156)||(52848065-52848210)
chr4 (56-164)||(56460076-56460186)
chr4 (82-152)||(19451293-19451363)
chr4 (56-121)||(11364261-11364327)
chr4 (11-102)||(30780031-30780122)
chr4 (56-156)||(37654411-37654511)
chr4 (11-152)||(40345358-40345499)
chr4 (56-152)||(22220415-22220511)
chr4 (68-152)||(24157190-24157274)
chr4 (56-152)||(37624561-37624657)
[»] scaffold0502 (1 HSPs)
scaffold0502 (18-164)||(586-731)
[»] chr3 (32 HSPs)
chr3 (18-156)||(33194042-33194180)
chr3 (56-164)||(40487821-40487929)
chr3 (11-152)||(2458012-2458154)
chr3 (56-152)||(50646159-50646255)
chr3 (82-156)||(39356886-39356960)
chr3 (11-146)||(36844747-36844881)
chr3 (11-164)||(38140943-38141095)
chr3 (18-156)||(42071986-42072123)
chr3 (11-156)||(45213726-45213871)
chr3 (11-152)||(51398015-51398156)
chr3 (11-161)||(8817136-8817286)
chr3 (11-174)||(30431103-30431266)
chr3 (56-164)||(9189484-9189592)
chr3 (56-156)||(50038220-50038320)
chr3 (82-156)||(4758992-4759066)
chr3 (17-156)||(35557768-35557907)
chr3 (17-144)||(19373599-19373725)
chr3 (56-156)||(22857091-22857191)
chr3 (18-148)||(50346635-50346763)
chr3 (82-152)||(3152881-3152951)
chr3 (66-156)||(11019883-11019975)
chr3 (56-152)||(36729858-36729955)
chr3 (109-151)||(52654310-52654351)
chr3 (56-156)||(31583483-31583583)
chr3 (11-164)||(36460799-36460951)
chr3 (11-152)||(38016380-38016520)
chr3 (56-112)||(30934858-30934914)
chr3 (82-152)||(30426399-30426469)
chr3 (82-164)||(33024375-33024457)
chr3 (68-112)||(26057812-26057856)
chr3 (82-165)||(32492256-32492339)
chr3 (73-156)||(47823517-47823600)
[»] chr7 (41 HSPs)
chr7 (11-152)||(28289220-28289360)
chr7 (17-156)||(19105013-19105151)
chr7 (56-164)||(10476129-10476237)
chr7 (56-156)||(30312459-30312559)
chr7 (11-156)||(33939739-33939884)
chr7 (11-153)||(40753435-40753575)
chr7 (11-154)||(27947506-27947649)
chr7 (11-138)||(21819303-21819428)
chr7 (11-156)||(24680129-24680274)
chr7 (11-152)||(35777824-35777965)
chr7 (11-144)||(40339472-40339604)
chr7 (11-156)||(48843553-48843698)
chr7 (11-152)||(21752117-21752257)
chr7 (56-158)||(44453134-44453237)
chr7 (11-174)||(1741974-1742137)
chr7 (56-152)||(29636276-29636373)
chr7 (56-146)||(6747238-6747327)
chr7 (75-152)||(37490789-37490866)
chr7 (56-164)||(25440865-25440973)
chr7 (56-164)||(7759255-7759361)
chr7 (17-152)||(42753713-42753844)
chr7 (11-156)||(13405132-13405277)
chr7 (126-164)||(39557315-39557353)
chr7 (56-152)||(45948679-45948776)
chr7 (56-152)||(1031160-1031256)
chr7 (56-156)||(8603976-8604076)
chr7 (11-152)||(31418518-31418659)
chr7 (56-152)||(34274799-34274895)
chr7 (11-155)||(6563424-6563563)
chr7 (82-165)||(36807927-36808010)
chr7 (109-156)||(27935768-27935814)
chr7 (66-156)||(34012162-34012252)
chr7 (82-152)||(42880010-42880080)
chr7 (56-156)||(45933637-45933734)
chr7 (82-152)||(48684728-48684798)
chr7 (83-164)||(10599206-10599287)
chr7 (82-156)||(23935423-23935496)
chr7 (111-156)||(32501855-32501899)
chr7 (11-48)||(34012565-34012602)
chr7 (11-48)||(37815833-37815870)
chr7 (56-112)||(4268657-4268713)
[»] chr5 (32 HSPs)
chr5 (11-156)||(39566184-39566329)
chr5 (11-164)||(36164880-36165032)
chr5 (11-152)||(6518981-6519123)
chr5 (18-164)||(27797774-27797916)
chr5 (56-156)||(4630866-4630966)
chr5 (11-152)||(34446034-34446175)
chr5 (11-161)||(15167019-15167167)
chr5 (18-164)||(3306023-3306169)
chr5 (56-164)||(14620545-14620654)
chr5 (56-152)||(35765952-35766048)
chr5 (56-156)||(4424978-4425076)
chr5 (11-146)||(11977599-11977733)
chr5 (18-156)||(26660756-26660893)
chr5 (18-156)||(26932349-26932486)
chr5 (11-157)||(7748905-7749050)
chr5 (73-156)||(7579938-7580021)
chr5 (56-152)||(7721101-7721196)
chr5 (56-154)||(14161952-14162051)
chr5 (82-174)||(21375729-21375821)
chr5 (56-152)||(34208945-34209045)
chr5 (56-164)||(42661991-42662099)
chr5 (82-158)||(25768511-25768586)
chr5 (11-164)||(38362145-38362297)
chr5 (70-156)||(11195082-11195165)
chr5 (56-152)||(13761562-13761659)
chr5 (62-112)||(21195424-21195474)
chr5 (56-156)||(38369874-38369973)
chr5 (11-120)||(39335210-39335321)
chr5 (67-112)||(1309421-1309466)
chr5 (11-48)||(7579601-7579638)
chr5 (56-152)||(10344984-10345080)
chr5 (11-47)||(27600504-27600540)
[»] chr6 (20 HSPs)
chr6 (11-156)||(9940649-9940793)
chr6 (11-156)||(577062-577207)
chr6 (56-156)||(32193703-32193803)
chr6 (11-152)||(12459326-12459466)
chr6 (75-164)||(12588519-12588606)
chr6 (57-153)||(13011397-13011495)
chr6 (11-156)||(18737095-18737242)
chr6 (82-156)||(10520717-10520791)
chr6 (11-152)||(31443452-31443594)
chr6 (11-164)||(19674973-19675124)
chr6 (11-152)||(234039-234180)
chr6 (56-164)||(13503896-13504008)
chr6 (56-174)||(24163765-24163884)
chr6 (57-152)||(12322939-12323032)
chr6 (56-151)||(12063561-12063657)
chr6 (18-158)||(24555941-24556082)
chr6 (11-151)||(17552254-17552392)
chr6 (11-48)||(20226228-20226265)
chr6 (11-48)||(22120212-22120249)
chr6 (86-165)||(31233707-31233786)
[»] chr8 (27 HSPs)
chr8 (11-156)||(17920957-17921103)
chr8 (56-152)||(6374419-6374514)
chr8 (11-156)||(9812174-9812318)
chr8 (11-152)||(40228579-40228720)
chr8 (11-152)||(39463264-39463404)
chr8 (82-164)||(43084705-43084787)
chr8 (17-146)||(31233953-31234081)
chr8 (11-174)||(39698673-39698836)
chr8 (11-164)||(514867-515022)
chr8 (11-102)||(15750337-15750431)
chr8 (82-156)||(31693699-31693773)
chr8 (11-152)||(5295413-5295554)
chr8 (66-164)||(12339704-12339803)
chr8 (11-174)||(4760566-4760728)
chr8 (82-156)||(37559611-37559685)
chr8 (11-122)||(13367956-13368067)
chr8 (11-48)||(9880508-9880545)
chr8 (11-152)||(43448721-43448862)
chr8 (73-156)||(2375910-2375993)
chr8 (11-164)||(29312198-29312353)
chr8 (56-152)||(39765912-39766007)
chr8 (11-144)||(45358902-45359034)
chr8 (11-142)||(31899255-31899386)
chr8 (109-156)||(40362436-40362482)
chr8 (82-156)||(44713535-44713609)
chr8 (56-151)||(19574392-19574489)
chr8 (76-151)||(19438242-19438317)
[»] chr2 (41 HSPs)
chr2 (67-156)||(29411697-29411786)
chr2 (11-156)||(18719440-18719584)
chr2 (18-156)||(38926607-38926745)
chr2 (11-156)||(8540039-8540184)
chr2 (67-156)||(4469502-4469591)
chr2 (11-156)||(29808813-29808959)
chr2 (11-174)||(37038777-37038936)
chr2 (57-164)||(11188545-11188652)
chr2 (56-152)||(35799208-35799303)
chr2 (58-152)||(12566034-12566128)
chr2 (82-152)||(16463110-16463180)
chr2 (58-152)||(18579172-18579266)
chr2 (56-164)||(5717506-5717613)
chr2 (11-152)||(12342098-12342239)
chr2 (82-174)||(14285921-14286013)
chr2 (103-156)||(28072568-28072620)
chr2 (56-156)||(45301766-45301866)
chr2 (82-152)||(12393999-12394069)
chr2 (11-156)||(6220411-6220556)
chr2 (83-152)||(13561999-13562068)
chr2 (67-156)||(36685803-36685892)
chr2 (11-152)||(441238-441379)
chr2 (82-154)||(7644649-7644721)
chr2 (11-131)||(11132575-11132696)
chr2 (59-151)||(27964425-27964517)
chr2 (18-102)||(19469579-19469664)
chr2 (126-174)||(34035869-34035917)
chr2 (81-152)||(36177981-36178052)
chr2 (56-152)||(4051755-4051852)
chr2 (17-112)||(4658245-4658341)
chr2 (56-122)||(19164391-19164458)
chr2 (82-156)||(35046519-35046593)
chr2 (56-164)||(42004884-42004993)
chr2 (17-152)||(42753750-42753887)
chr2 (11-48)||(8774161-8774198)
chr2 (11-48)||(8789437-8789474)
chr2 (11-48)||(19636617-19636654)
chr2 (11-48)||(19835210-19835247)
chr2 (103-156)||(27986037-27986088)
chr2 (56-156)||(33482281-33482381)
chr2 (11-48)||(34546155-34546192)
[»] scaffold0294 (1 HSPs)
scaffold0294 (11-152)||(3511-3652)
[»] scaffold0026 (1 HSPs)
scaffold0026 (57-164)||(4133-4241)
[»] scaffold0110 (1 HSPs)
scaffold0110 (17-152)||(24753-24888)
[»] scaffold0300 (1 HSPs)
scaffold0300 (17-164)||(4558-4704)
[»] scaffold0565 (2 HSPs)
scaffold0565 (56-156)||(10006-10107)
scaffold0565 (82-156)||(9719-9793)
[»] scaffold0015 (1 HSPs)
scaffold0015 (82-164)||(21159-21241)
[»] scaffold0332 (1 HSPs)
scaffold0332 (56-152)||(3862-3958)
[»] scaffold2107 (1 HSPs)
scaffold2107 (82-158)||(591-667)
[»] scaffold0136 (1 HSPs)
scaffold0136 (11-101)||(9600-9690)


Alignment Details
Target: chr1 (Bit Score: 176; Significance: 1e-94; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 11 - 296
Target Start/End: Original strand, 49900762 - 49901042
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    ||||| |||||||||||||| |||||||||| ||||||       |||||||||  ||||| |||||||||||||||||||||||||||||| |||||||    
T  49900762 attatcctaatcaactattggtttatttttctttaaagaaaaaaataatactttgaaagtagtgtatatattattaattgaaaggtacaattgaaaataa 49900861  T
Q  111 aa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaagcctaaaacgacactaattttaaaatag--gagta 207  Q
    || |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||        ||||||||||||||||||||  |||||    
T  49900862 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaacattttttgaggctaaaa--------cgacactaattttaaaatagaggagta 49900953  T
Q  208 attgatggatgtctcattatctgtgtgaggaatttgtatgagaagcatatttaattggtttctcatgtgccataatttacacaagtcca 296  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49900954 attgatggatgtctcattacctgtgtgaggaatttgtaagagaagcatatttaattggtttctcatgtgccataatttacacaagtcca 49901042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 350 - 501
Target Start/End: Original strand, 49901096 - 49901247
Alignment:
Q  350 caaagtgttcaataaaaaatttagaatactttagttatagtcatagaaaaacagctatgtggtagctcattccaatatgtcgccagccattcagagactt 449  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  49901096 caaagtgttcaataaaaaaattagaatactttagttatagtcatagaaaaacagctatgtggtagctcatcccaatatgtcgccagccattcagagactt 49901195  T
Q  450 caatactgctgctactgcacggtttgctttccctcagttgagtgatatatat 501  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49901196 caatactgctgctactgcacggtttgctttccctcaattgagtgatatatat 49901247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 29568041 - 29567901
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    |||||||||||||||||||| ||| |||||||||||||       ||||||||| |||||| |||||||| ||||||||||| ||||||||| ||||  |    
T  29568041 attattctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaa 29567943  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||||| | ||| ||||||||||||||||| |||||    
T  29567942 aaagttattattgca-ttggaaactgaaagtgacattcatttt 29567901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 27209134 - 27208995
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaat-a 109  Q
    ||||| |||||||||||||||||| |||||||||||||       ||||||||| |||||| |||||||| ||||||||||| ||||||||| ||||| |    
T  27209134 attatcctaatcaactattgatttgtttttcattaaagaaaaaa-taatactttggaagtagtgtatataatattaattgaatggtacaattgaaaataa 27209036  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattt 151  Q
    ||||||||||||| | ||| |||| |||||||||||| ||||    
T  27209035 aaagttattattgca-ttggaaaccgaaagtgacattcattt 27208995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 44108747 - 44108600
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnn-taatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaat 108  Q
    ||||| |||| ||||||||| ||| |||||||||||||        ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| ||||     
T  44108747 attatcctaaacaactattggtttgtttttcattaaagaaaaaaaataatactttggaagtattgtaacatagtattaattgaagggtacaattgaaaag 44108648  T
Q  109 aaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||||    
T  44108647 aaaaagttattattgtattggaaa-ctgaaagtgacatttattttaaaa 44108600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 51244890 - 51244994
Alignment:
Q  59 tactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaat 157  Q
    |||||| ||||||||||||||| |||||| ||||| |||||||| ||||  ||||||||||||||||||   ||| |||||||||| ||||||||||||     
T  51244890 tactttggaagtaatgtatatagtattaactgaaatgtacaattgaaaagaaaaagttattattgtatt--gaaagtgaaagtgacttttattttaaaac 51244987  T
Q  158 atttttt 164  Q
    |||||||    
T  51244988 atttttt 51244994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 7191212 - 7191357
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    ||||| |||||||||||||  |||||||||| ||||||       ||||| |||| ||||| |||||||| |||||||||||||||| |||| ||||  |    
T  7191212 attatcctaatcaactatttgtttatttttcgttaaagaaaaaaataatattttaaaagtagtgtatatagtattaattgaaaggtataattgaaaagaa 7191311  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||||  | | |||||  ||||||||||||||||||||||    
T  7191312 aaagttattattaca-tagaaaatcgaaagtgacatttattttaaaa 7191357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 46554899 - 46554799
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaat-aaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| |||||||| ||||||||||| ||||||||| ||||| |||||||||||||| |  || |||||||| |||||||| |||||||    
T  46554899 taatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaataaaaagttattattgca-gtggaaactgaaggtgacattcattttaa 46554801  T
Q  155 aa 156  Q
    ||    
T  46554800 aa 46554799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 25487189 - 25487072
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| |||  | | ||||||||| | ||||||||| |||| |||| |||||||||| ||| ||||||||||||||||||| |||||||    
T  25487189 taatactttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaagttattattgcatt-gaaaactgaaagtgacattcattttaa 25487091  T
Q  155 aatattttttggggctaaa 173  Q
    |||| |||||  |||||||    
T  25487090 aatagtttttttggctaaa 25487072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 10842882 - 10842763
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttta 153  Q
    ||||||||| |||||| ||||  ||| |||||||||||  |||||||| |||| |||| |||||||||| ||| ||||||||||||||||||| |||||     
T  10842882 taatactttggaagtactgtaacatagtattaattgaagagtacaattgaaaagaaaatgttattattgcatt-gaaaactgaaagtgacattcattttg 10842784  T
Q  154 aaatattttttggggctaaaa 174  Q
    ||||| |||||  ||||||||    
T  10842783 aaataatttttttggctaaaa 10842763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 26595075 - 26595219
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    ||||| |||||||| ||||| ||| |||||||||||||       |||| |||| ||| || |||||||| ||||||||||| ||||||||| ||||  |    
T  26595075 attatcctaatcaattattggtttgtttttcattaaagaaaaat-taattctttggaaatagtgtatatagtattaattgaatggtacaattgaaaagaa 26595173  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||| ||||||||| | ||| ||||||||||||||||| |||||||||    
T  26595174 aaatttattattgca-ttgtaaactgaaagtgacattcattttaaaa 26595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 24884490 - 24884408
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||||||||||| |||| |||| ||||||||| |||||||||| ||| ||||  ||||||||||||||||||||||||| |||||    
T  24884490 tattaattgaagggtataattgaaaataaaaagttattattgcattggaaat-tgaaagtgacatttattttaaaataattttt 24884408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 24611530 - 24611688
Alignment:
Q  17 ctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaatt-aaaaataaaagt 114  Q
    |||||||||||||| ||| |||||||||||||       ||||||||| |||||| ||| | ||| ||||||||||| ||||||||| ||||  ||||||    
T  24611530 ctaatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagt 24611629  T
Q  115 tattattgtatttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaa 174  Q
    |||||||  ||| | ||||| ||||||||||| ||||| ||  |||||||  ||||||||    
T  24611630 tattattacattag-aaactaaaagtgacattcattttgaacaattttttttggctaaaa 24611688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 9915589 - 9915444
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||||||| |||||||||||||       |||||||||  ||||| ||| | ||| ||||||||||| ||||||||| ||||      
T  9915589 attatcctaatcaactattgatttgtttttcattaaag-aaaaaataatactttgcaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 9915491  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||| ||||||||| | ||| ||||||||| ||||||| |||||||||    
T  9915490 aaaatttattattgca-ttggaaactgaaaatgacattcattttaaaa 9915444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 15823180 - 15823035
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| ||||||||||| || ||| |||||||||||||       |||||||||  ||||| ||||  ||| ||||||||||| ||||||||| |||| |    
T  15823180 attatcctaatcaactaatggtttgtttttcattaaagaaaaaa-taatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 15823082  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||| |||||||||| ||| |||| |||||||||||||| |||||||||    
T  15823081 aaaagttattattgcattggaaa-ctgaaagtgacattcattttaaaa 15823035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 31798729 - 31798572
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaatt-aaaaataaaagtt 115  Q
    ||||||||||||| ||| |||||||||||||       ||||||||| |||||| ||| | ||| |||||||| ||||||| |||| ||||  |||||||    
T  31798729 taatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtaacatagtattaattaaaaggtataattgaaaagaaaaagtt 31798630  T
Q  116 attattgtatttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaa 174  Q
    ||||||||| | | |||||||||||||| || ||||| ||| | |||||  ||||||||    
T  31798629 attattgta-tcggaaactgaaagtgacgttcattttgaaacaatttttttggctaaaa 31798572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 49468716 - 49468857
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgta-tatattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       |||| |||| |||||| |||| |||| ||||||||||| ||||||||| |||| |    
T  49468716 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatcctttggaagtagtgtaatatagtattaattgaagggtacaattgaaaaga 49468814  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||| |||||||||| | ||| ||||||||||| ||||| |||||    
T  49468815 aaatgttattattgca-ttggaaactgaaagttacattcatttt 49468857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 164
Target Start/End: Original strand, 33622391 - 33622523
Alignment:
Q  32 tttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaata-aaagttattattgtatttgaa 130  Q
    |||||||||||||||||       |||||||||||||||| |||| ||| |||||| | ||  |||||||| |||| | ||||||||||||| | |||||    
T  33622391 tttatttttcattaaagaaaaatgtaatactttagaagtagtgtacataatattaactaaagagtacaattgaaaagataaagttattattgca-ttgaa 33622489  T
Q  131 aactgaaagtgacatttattttaaaatatttttt 164  Q
    ||  |||| ||||||| ||||||||||| |||||    
T  33622490 aatcgaaaatgacattcattttaaaataattttt 33622523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 1740717 - 1740791
Alignment:
Q  82 tattaattgaaaggtacaattaaaaat-aaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||| ||||||||| ||||| ||||||||||||| |  ||| ||||||||||||||||| |||||||||    
T  1740717 tattaattgaatggtacaattgaaaataaaaagttattatt-tcattggaaactgaaagtgacattcattttaaaa 1740791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 16757244 - 16757333
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa-aagttattattgtatttgaaaactgaaagtgacat 145  Q
    |||||||||  ||||  |||||||| ||||||||||| ||||||||| |||| || |||||||||||| | ||| ||||||||||||||||    
T  16757244 taatactttgaaagttgtgtatatagtattaattgaagggtacaattgaaaagaataagttattattgca-ttggaaactgaaagtgacat 16757333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 50094376 - 50094234
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| |||  ||||||||||||        ||||||||  ||||| ||||  ||| ||||||||||| ||||||||| |||| |    
T  50094376 attatcctaatcaactattggtttgcttttcattaaagaaaaaaacaatactttgtaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 50094277  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||| |||||||||| ||| |||| |||||||||||||| |||||    
T  50094276 aaaagttattattgcattggaaa-ctgaaagtgacattcatttt 50094234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 2610880 - 2610964
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagt 140  Q
    ||||||||| |||||| |||||| | ||||||||||| | ||||||| ||||  |||| ||||||||||| |||||||||||||||    
T  2610880 taatactttggaagtagtgtatagaatattaattgaatgttacaattgaaaagaaaaaattattattgta-ttgaaaactgaaagt 2610964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 8895021 - 8895173
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaa-ta 109  Q
    ||||| |||||||||||||||||| ||||||||||||        ||||| |||  || || |||||||| ||||||||||| ||||||||||||||  |    
T  8895021 attatcctaatcaactattgatttgtttttcattaaa-aaaaaaataatattttgaaaatagtgtatataatattaattgaagggtacaattaaaaagaa 8895119  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||| ||| ||||  | || |||| | ||||| ||||||||||||||||| |||||    
T  8895120 aaatttactattaca-ttaaaaattaaaagtaacatttattttaaaataattttt 8895173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 18794548 - 18794691
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaa-ttaaaaata 109  Q
    |||||||||||||||||||  ||| |||| ||||||||        |||| ||| |||||| |||||||| ||||||||||| ||| ||| | ||||  |    
T  18794548 attattctaatcaactattagtttgttttccattaaagaaaaaag-aatattttggaagtagtgtatataatattaattgaagggtgcaactgaaaagaa 18794646  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||||    
T  18794647 aaagttattattgcattcg-aaactgaaa-tgacatttattttaaaa 18794691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 27721033 - 27720957
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaata 158  Q
    ||||||||| | ||||||||| |||| |||| ||||||||| |||| ||||||||||||||||||| ||||| |||||    
T  27721033 tattaattggagggtacaattgaaaagaaaaagttattattatatt-gaaaactgaaagtgacattcatttttaaata 27720957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 35848009 - 35848073
Alignment:
Q  82 tattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatt 146  Q
    ||||||||||||||||||||| ||||  |||||||||||||| | ||| |||||||||||||||||    
T  35848009 tattaattgaaaggtacaattgaaaagaaaaagttattattgca-ttgtaaactgaaagtgacatt 35848073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 31699302 - 31699395
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa 112  Q
    ||||||||||||| ||| |||||||||||||       ||||| ||| |||||||||| |||| ||||||||||| ||||||||| |||| ||||    
T  31699302 taatcaactattggtttgtttttcattaaagaaaaaa-taatattttggaagtaatgtttatagtattaattgaagggtacaattgaaaagaaaa 31699395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 39477758 - 39477857
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaa 155  Q
    ||||||||  |||||| |||||||| |||||||||||  |||||||| |||| |||| ||||||||| | ||| ||| | ||||||||||  ||||||||    
T  39477758 taatacttaggaagtagtgtatatagtattaattgaagtgtacaattgaaaaaaaaaattattattgca-ttggaaattaaaagtgacatccattttaaa 39477856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 156
Target Start/End: Original strand, 44557112 - 44557194
Alignment:
Q  74 gtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||  |||||||||| ||||||||| |||| |||| |||||||||| ||| || | |||||||||||||| |||||||||    
T  44557112 gtatatagcattaattgaatggtacaattgaaaagaaaatgttattattgcattggaga-ctgaaagtgacattcattttaaaa 44557194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 9092737 - 9092700
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  9092737 attattctaatcaaatattgatttgtttttcattaaag 9092700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 14373487 - 14373571
Alignment:
Q  80 attattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||||||||||| | |||| |||| ||||||||| |||||| ||| ||| |||| |||||| ||||||| ||||||||||| |||||    
T  14373487 attattaattggagggtataattgaaaataaaaagttattgttgcattggaaa-ctgaaaatgacattcattttaaaataattttt 14373571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 26755321 - 26755225
Alignment:
Q  56 taatactttagaagtaatgt-atatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| |||||| ||| | ||| ||||||||||| |||| | | ||||  ||||||||||| |||||| |||| |||||||||||||| |||||    
T  26755321 taatactttggaagtagtgtgacatagtattaattgaagggtaaattgaaaagaaaaagttattaatgtattggaaa-ctgaaagtgacattcatttt 26755225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 50249411 - 50249315
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| |||||| |||  | | ||||||||| | ||||||||| |||| |||| |||||||||| ||| |||| |||||||||||||| |||||    
T  50249411 taatactttggaagtagtgtgcaaagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaa-ctgaaagtgacattcatttt 50249315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 52125141 - 52125281
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaattaaaaat- 108  Q
    |||||||||||||||||||| ||| ||||||||||||        ||||||| | |||||| ||| | ||| ||||||||||| ||||||||| | |||     
T  52125141 attattctaatcaactattggtttgtttttcattaaa-caaaaaataatactatggaagtagtgtaacataatattaattgaagggtacaattgagaata 52125239  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattt 151  Q
    |||| ||||||||| | ||| ||||||||| ||||||| ||||    
T  52125240 aaaaattattattgca-ttggaaactgaaattgacattcattt 52125281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 15573659 - 15573612
Alignment:
Q  104 aaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||| |||||||||||||| ||| ||||||||||||||||||| |||||    
T  15573659 aaaaaaaaagttattattgcatt-gaaaactgaaagtgacattcatttt 15573612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 25560922 - 25560978
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa 112  Q
    ||||| ||| |||||| |||||||| |||||||||||||||| |||| |||| ||||    
T  25560922 taatattttggaagtagtgtatatagtattaattgaaaggtataattgaaaagaaaa 25560978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 45839783 - 45839630
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaat-a 109  Q
    ||||| ||||||||| |||||||| |||||||||||||       ||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||| |    
T  45839783 attatcctaatcaacaattgatttgtttttcattaaagaaaaaaataatactttggaagtaatgtatataatattaattgaatggtacaattgaaaataa 45839684  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||||||||||||||||| | ||||||||||||||||| |||| |||| |||||||    
T  45839683 aaagttattattgtattag-aaactgaaagtgacattcatttcaaaacatttttt 45839630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 34413558 - 34413699
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaat-a 109  Q
    ||||| |||||||||||||| ||  |||||||||||||       ||||| |||||||||| |||||||| ||||||||||| ||||||||| ||||| |    
T  34413558 attatgctaatcaactattggttcttttttcattaaagaaaaaaataatattttagaagtagtgtatataatattaattgaatggtacaattgaaaataa 34413657  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||    
T  34413658 aaagttattattgcatttg-aaattgaaagtgacatttatttt 34413699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 29370749 - 29370586
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgta-tatattattaattgaaagg-tacaattaaaaat 108  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||||||| |||||| |||| | || |||||||||||||| ||||||| ||||     
T  29370749 attatcctaatcaactattggtttgtttttcattaaagaaaaa--taatactttggaagtagtgtaatttagtattaattgaaaggatacaattgaaaag 29370652  T
Q  109 aaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaa 174  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  29370651 aaaaagttattattatatt-gaaaactgaaagtgacatttattttaaaatattttttttggctaaaa 29370586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 50203212 - 50203077
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagtta 116  Q
    ||||||||||||||||| |||||||||||||       ||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||  ||||||||    
T  50203212 taatcaactattgatttgtttttcattaaagaaaaaa-taatacttttgaagtaatgtatataatattaattgaagggtacaattgaaaagaaaaagtta 50203114  T
Q  117 ttattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||| ||| |   ||||||||||||||| |||||||||    
T  50203113 ttattgcattgg---actgaaagtgacattcattttaaaa 50203077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 163
Target Start/End: Complemental strand, 34316368 - 34316216
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgta-tatattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||||||| |||||||||||||       |||| |||| |||||| || | |||| ||||||||||| ||||||||| ||||||    
T  34316368 attatcctaatcaactattgatttgtttttcattaaagaaagaa-taatcctttggaagtagtgcaatataatattaattgaagggtacaattgaaaata 34316270  T
Q  110 aaag-ttattattgtatttgaaaactgaaagtgacatttattttaaaatattttt 163  Q
    |||  ||||||||| ||| |||| |||||||||||||||||||||||||| ||||    
T  34316269 aaaaattattattgcattggaaa-ctgaaagtgacatttattttaaaataatttt 34316216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 30261404 - 30261264
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    |||||| ||||||||||||| ||| |||||||||||||       |||||||||  |||||||||||||| ||||||||||| ||||||||| |||| ||    
T  30261404 attattttaatcaactattggtttgtttttcattaaagaaaaaa-taatactttgaaagtaatgtatatagtattaattgaagggtacaattgaaaagaa 30261306  T
Q  111 aa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||  ||||||||| | ||| ||||||||||||||||| |||||    
T  30261305 aacattattattgca-ttggaaactgaaagtgacattcatttt 30261264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 6991274 - 6991425
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    ||||| ||| |||||||||| ||||||||| |||||||       |||||||||  || || |||||||| |||||| |||| |||||| | ||||  ||    
T  6991274 attatcctagtcaactattggtttattttttattaaagaaaaaa-taatactttgaaaatagtgtatataatattaactgaagggtacattgaaaagaaa 6991372  T
Q  111 aagttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    || ||||||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  6991373 aaattattattgtatt-gaaaactgaaagtgacattcattttaaaataattttt 6991425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 47817877 - 47817755
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagtta 116  Q
    ||||||||||||| ||| |||||||||||||       ||||||||| |||||| |||||||| ||||||||||| ||||||||| ||||  ||||||||    
T  47817877 taatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaagtta 47817778  T
Q  117 ttattgtatttgaaaactgaaagt 140  Q
    |||||| | ||| |||||||||||    
T  47817777 ttattgca-ttgcaaactgaaagt 47817755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 49080495 - 49080628
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaat-aaaagtt 115  Q
    ||||||||||||||||| |||||||||||||       ||||||||  |||||| ||||  ||| ||||||||||| ||||||||| ||||| |||||||    
T  49080495 taatcaactattgatttgtttttcattaaagaaaaaa-taatacttcggaagtagtgtaacataatattaattgaagggtacaattgaaaataaaaagtt 49080593  T
Q  116 attattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||| |||  |||||||||||||||||| |||||    
T  49080594 attattgcatt--aaaactgaaagtgacattcatttt 49080628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 8971181 - 8971043
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagtta 116  Q
    |||| |||||||| ||| |||||||||||||       ||||||||| |||||| ||||||||||||||||||||  |||||||| ||||  |||| |||    
T  8971181 taataaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtatatattattaattgaagagtacaattgaaaagaaaaaatta 8971082  T
Q  117 ttattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||| |  ||||||||||||||||||  | |||||||||    
T  8971081 ttatt-tcattgaaaactgaaagtgacggtcattttaaaa 8971043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 19903895 - 19903988
Alignment:
Q  59 tactttagaagtaatgtatatattattaattgaaaggtacaa-ttaaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||| ||||||||||||||| |||||||||||||||||||   |||  |||||  |||||||||||||| ||||| |||||||||||||||||    
T  19903895 tactttggaagtaatgtatataatattaattgaaaggtacaaccgaaaggtaaaatgtattattgtatttg-aaactcaaagtgacatttatttt 19903988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 41496294 - 41496197
Alignment:
Q  68 agtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttg 165  Q
    |||| |||||||| |||||||||||  |||||||| |||| |||| |||||||||||||| ||||||||||||||| ||||||||| ||| | ||||||    
T  41496294 agtagtgtatataatattaattgaagagtacaattgaaaagaaaaagttattattgtatt-gaaaactgaaagtgagatttattttgaaacaatttttg 41496197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 44571883 - 44572021
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaataaaagtt 115  Q
    ||||||||||||| |||||||||||||||||       ||||||||| |||||| ||||  ||||||||||||||| ||||||||| ||||  |||||||    
T  44571883 taatcaactattggtttatttttcattaaagaaaaaa-taatactttggaagtagtgtaacatattattaattgaagggtacaattgaaaagaaaaagtt 44571981  T
Q  116 attattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
     |||||| | ||| |||||||||| |||||| |||||||||    
T  44571982 tttattgca-ttggaaactgaaagcgacattcattttaaaa 44572021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 1819708 - 1819567
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| ||||||||||||||||||||||||||||||||       |||||||||  ||||| ||| | ||| ||||||||||| ||||||||| ||||      
T  1819708 attatcctaatcaactattgatttatttttcattaaag-aaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 1819610  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||| ||||||||| | ||| ||||||||||||||||| |||||    
T  1819609 aaaatttattattgca-ttggaaactgaaagtgacattcatttt 1819567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 41920320 - 41920465
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    |||||||||||||||||||| ||| |||||||||||||       ||||||||| |||||| || |  ||| ||||||||||| |||| |||| |||| |    
T  41920320 attattctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttggaagtagtggaacataatattaattgaagggtataattgaaaaga 41920418  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||| ||||||||||  |||| ||||||||| |||||||||||||||||    
T  41920419 aaaagttattattgc-tttggaaactgaaaatgacatttattttaaaa 41920465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 44868269 - 44868363
Alignment:
Q  17 ctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa 112  Q
    |||||||||||||||||| |||| ||||||||       ||||| ||| ||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  44868269 ctaatcaactattgatttgttttccattaaagataaaa-taatattttggaagtaatgtatatattattaattgaatggtacaattgaaaagaaaa 44868363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 45043599 - 45043744
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||| ||| |||||| ||||  ||| ||||||||||| ||||||||| |||| |    
T  45043599 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatattttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 45043697  T
Q  110 aaag-ttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||  ||||||||| ||| ||||||||||||||||||| |||||||||    
T  45043698 aaaaattattattgcatt-gaaaactgaaagtgacattcattttaaaa 45043744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 52957801 - 52957942
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| ||||      
T  52957801 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttggaagtagtgtaacataatattaattgaagggtacaattgaaaaga 52957899  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||| | ||| ||||||||||||||||| |||||    
T  52957900 aaaagttattattgca-ttggaaactgaaagtgacattcatttt 52957942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 10573166 - 10573306
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    ||||| ||||||||||||||||||  |||||||||| |       ||||||||| |||||| |||||||| ||||||||||| ||||||||| ||||  |    
T  10573166 attatcctaatcaactattgatttgattttcattaatgaaaaaa-taatactttggaagtattgtatatagtattaattgaagggtacaattgaaaagaa 10573264  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||||| | ||| ||||| ||| ||||||| |||||    
T  10573265 aaagttattattgca-ttggaaactaaaaatgacattcatttt 10573306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 29519580 - 29519677
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaat-aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||||| ||||  ||| ||||||||||| | ||||||| ||||| |||||||||||||| | ||| ||||| |||||||||||||||||    
T  29519580 taatactttagaagtagtgtaacatagtattaattgaaggatacaattgaaaataaaaagttattattgca-ttggaaactaaaagtgacatttatttt 29519677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 620187 - 620289
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaa-gnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaata 109  Q
    |||||| ||||||||||||||||| |||||| ||||| |       ||||||||| ||||||||||||| | ||||||||||| ||||||||| |||| |    
T  620187 attattttaatcaactattgatttgtttttctttaaaagaaaaaaataatactttggaagtaatgtatagagtattaattgaagggtacaattgaaaaga 620286  T
Q  110 aaa 112  Q
    |||    
T  620287 aaa 620289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 19878794 - 19878653
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||||||| |||||| ||||  ||| ||| ||||||| ||||||||| |||| |    
T  19878794 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttggaagtagtgtaacatagtataaattgaagggtacaattgaaaaga 19878696  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||| |||||||||| ||| |||| |||||||||||||| |||||    
T  19878695 aaaagttattattgcattggaaa-ctgaaagtgacattcatttt 19878653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 53814508 - 53814649
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaat- 108  Q
    ||||| |||||||| ||||||||| |||||||||||||       |||||||||  ||||| ||||  ||| ||||||||||| |||||||||||||||     
T  53814508 attatcctaatcaattattgatttgtttttcattaaagaaaaaa-taatactttgaaagtagtgtaacatagtattaattgaagggtacaattaaaaata 53814606  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||| | |||  |||| ||||||||||| |||||    
T  53814607 aaaagttattattgca-ttgttaactaaaagtgacattcatttt 53814649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 27653820 - 27653677
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| ||||||||||||||| || |||||||||||||       ||||| ||| |||||| ||||  ||| ||||||||||| ||||||||| |||| |    
T  27653820 attatcctaatcaactattgagttgtttttcattaaagaaaaaa-taatattttggaagtagtgtaacatagtattaattgaagggtacaattgaaaa-a 27653723  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||| |||| ||| |||| || ||| |||||||||||||||||    
T  27653722 aaagttatcattgcattagaaa-ctaaaaatgacatttattttaaaa 27653677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 27943608 - 27943698
Alignment:
Q  63 ttagaagtaatgtatatattattaattgaaaggtacaatt--aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| |||||||| ||||||||||| |||| ||||  ||||| | |||||||||||| | ||||||| ||||||||||||| |||||    
T  27943608 ttagaagtagtgtatataatattaattgaagggtataattgaaaaaaaagaagttattattgca-ttgaaaattgaaagtgacattcatttt 27943698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 47458441 - 47458497
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa 112  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||| |||| ||||    
T  47458441 taatactttaaaagtaatgtatatagtattaattgaatggtacaattgaaaagaaaa 47458497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 49089609 - 49089469
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||||||| |||||| ||||  ||| || |||||||| |||| ||||  ||| |    
T  49089609 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttggaagtagtgtaacatagtactaattgaagggtataattggaaaaa 49089511  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||||| ||| ||||||| ||||||||||| |||||    
T  49089510 aaagttattattgcatt-gaaaactaaaagtgacattcatttt 49089469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 42605711 - 42605580
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaagtta 116  Q
    ||||||||||||| ||| |||||||||||||       |||||||||  ||||||||||  ||| ||||||||||| ||||||||| |||| ||||   |    
T  42605711 taatcaactattggtttgtttttcattaaagaaaaaa-taatactttgaaagtaatgtaacataatattaattgaagggtacaattgaaaagaaaaaa-a 42605614  T
Q  117 ttattgtatttgaaaactgaaagtgacatttatt 150  Q
    |||||| |||| |||||||||| |||||||||||    
T  42605613 ttattgcatttaaaaactgaaaatgacatttatt 42605580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 52162205 - 52162104
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaa 155  Q
    ||||||||| ||| || ||||| || ||||||||||| |||| |||| |||| |||| |||||||||  || ||||| ||||||||||||| ||||||||    
T  52162205 taatactttggaactagtgtatttagtattaattgaagggtataattcaaaaaaaaa-ttattattgcgtt-gaaaattgaaagtgacattcattttaaa 52162108  T
Q  156 atat 159  Q
    ||||    
T  52162107 atat 52162104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 50623230 - 50623084
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||| ||| |||||||||||||       |||||||||||||||| ||| | ||  ||||||||||| |||| |||| ||||      
T  50623230 attatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttagaagtagtgtaacattatattaattgaagggtataattgaaaaga 50623131  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||||||||| | ||||||||| ||| | ||||  |||||||||    
T  50623130 aaaagttattattgca-ttgaaaactaaaaataacatacattttaaaa 50623084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 56373630 - 56373741
Alignment:
Q  56 taatactttagaagtaatgta---tatattattaattgaaaggtacaattaaaaataaaag-ttattattgtatttgaaaactgaaagtgacatttattt 151  Q
    ||||||||| |||||| ||||   |||| ||||||||||| ||||||||| |||| ||||  |||||||| |||| |||| |||||||| | ||| ||||    
T  56373630 taatactttggaagtagtgtaacatataatattaattgaagggtacaattgaaaagaaaaaattattattatattagaaa-ctgaaagtaatattcattt 56373728  T
Q  152 taaaatatttttt 164  Q
    |||||||||||||    
T  56373729 taaaatatttttt 56373741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 20448185 - 20448044
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| |||  ||||||||||||       ||||||||| |||||| ||||  ||| ||||||||||| |||| |||| |||| |    
T  20448185 attatcctaatcaactattggtttgattttcattaaagaaaaaa-taatactttggaagtagtgtaacatagtattaattgaagggtataattgaaaaga 20448087  T
Q  110 aaag-ttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||  ||||||||| ||| ||||||||||||||||||| |||||    
T  20448086 aaaaattattattgcatt-gaaaactgaaagtgacattcatttt 20448044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 25123782 - 25123878
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaa-ttaaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||| ||| |||||  |||||||| ||||||||||| ||||||| | ||||  |||| ||||||||||| ||||||||||||| |||||||| ||||    
T  25123782 taatattttggaagtcgtgtatatagtattaattgaagggtacaactgaaaagaaaaaattattattgta-ttgaaaactgaaaatgacatttttttt 25123878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 39984963 - 39984926
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    |||||||||||||||||||||||| |||||||||||||    
T  39984963 attattctaatcaactattgatttgtttttcattaaag 39984926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 46392118 - 46392225
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaag-ttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| |||| |||| ||||||||||||||| |||| |||| ||||  |||||||||  |||||||| |||||||||||   |||||||    
T  46392118 taatactttggaagtagtgtaaatat-attaattgaaaggtataattgaaaagaaaaaattattattgc-tttgaaaagtgaaagtgacagccattttaa 46392215  T
Q  155 aatatttttt 164  Q
    |||| |||||    
T  46392216 aataattttt 46392225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 52848065 - 52848210
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| ||||||||||||||  || |||||||||||||       ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| ||||      
T  52848065 attatcctaatcaactattggcttgtttttcattaaagaaaaaa-taatactttggaagtagtgtaacataatattaattgaagggtacaattgaaaaga 52848163  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||| ||||||||| | ||| ||| ||||||||||||| |||||||||    
T  52848164 aaaaattattattgca-ttggaaattgaaagtgacattcattttaaaa 52848210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 56460186 - 56460076
Alignment:
Q  56 taatactttagaagtaatgtatatattatta--attgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||| ||| |||||| |||||||| |||||  |||||| | || ||||||||| |||| |||| ||||| ||| |||| |||||||||||||| |||||    
T  56460186 taatattttggaagtagtgtatataatattataattgaaggatataattaaaaagaaaaagttactattgcatt-gaaagctgaaagtgacattcatttt 56460088  T
Q  153 aaaatatttttt 164  Q
    |||| |||||||    
T  56460087 aaaacatttttt 56460076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 19451293 - 19451363
Alignment:
Q  82 tattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||| ||||||||| ||||  |||||||||||||| | ||| ||||||||||||||||| |||||    
T  19451293 tattaattgaagggtacaattgaaaagaaaaagttattattgca-ttggaaactgaaagtgacattcatttt 19451363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 11364327 - 11364261
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattatt 121  Q
    ||||||||| |||||| | |||||| ||||||||||| ||||||||| ||||  |||||||||||||    
T  11364327 taatactttggaagtagtatatataatattaattgaagggtacaattgaaaagaaaaagttattatt 11364261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 30780031 - 30780122
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt 102  Q
    ||||| |||||||||||||||||| |||||||||||||       |||||||||  ||||| | | |||| |||||||||||  ||||||||    
T  30780031 attatcctaatcaactattgatttgtttttcattaaagaaaaaaataatactttgaaagtagtctttataatattaattgaagagtacaatt 30780122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 37654511 - 37654411
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttta 153  Q
    ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| |||| |||| |||||||||||| ||| |||||| || ||||||| ||||||    
T  37654511 taatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgta-ttggaaactg-aattgacattcatttta 37654414  T
Q  154 aaa 156  Q
    |||    
T  37654413 aaa 37654411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 40345358 - 40345499
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||| ||| ||||| |||||||        |||||||| |||||| ||||  ||| ||||||||||| ||||||||| ||||      
T  40345358 attatcctaatcaactattggtttgttttttattaaagaaaatac-aatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 40345456  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||| ||||||||| | ||| ||||||||||||||||| |||||    
T  40345457 aaaaattattattgca-ttggaaactgaaagtgacattcatttt 40345499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 22220415 - 22220511
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||| ||| |||||| |||  ||| ||||||||| | ||||||||| |||| |||| |||||||||| ||| ||||| ||||| |||||||||||||    
T  22220415 taatattttggaagtagtgtgcatagtattaattggagggtacaattgaaaagaaaaagttattattgcatt-gaaaattgaaaatgacatttatttt 22220511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 24157274 - 24157190
Alignment:
Q  68 agtaatgtatatattattaattgaaaggtacaattaaaaa-taaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||||| |||||||| || | ||||||||||||  |||| ||||||||| ||| | ||||| ||| |||||||||||||    
T  24157274 agtaatgtatatagtattaattaaaggatacaattaaaaagaaaaaattattattgcattag-aaactaaaattgacatttatttt 24157190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 37624657 - 37624561
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| |||||| |||  | | ||||||||| | | ||||||| |||| |||| |||||||||| ||| |||| ||||||||||||||||||||    
T  37624657 taatacttttgaagtagtgtgcagagtattaattggaggatacaattgaaaagaaaaagttattattgcattggaaa-ctgaaagtgacatttatttt 37624561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 586 - 731
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaa-taaaagtta 116  Q
    ||||||||||||||||| ||||||||||||        ||||||||| |||||| |||||||| ||||||||||| ||||||||||||||  ||||||||    
T  586 taatcaactattgatttctttttcattaaa-acaaaaataatactttggaagtagtgtatataatattaattgaagggtacaattaaaaagaaaaagtta 684  T
Q  117 ttattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    |||||| | ||| ||| || |||||||||| |||||||||||||||||    
T  685 ttattgca-ttggaaattgtaagtgacattcattttaaaatatttttt 731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 33194042 - 33194180
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaat-aaaagtt 115  Q
    ||||||||||||||||| |||||||||||||       ||||||||| |||||||||||  ||| ||||||||||| ||||||||||||||| |||||||    
T  33194042 taatcaactattgatttgtttttcattaaagaaaaaa-taatactttggaagtaatgtaacataatattaattgaagggtacaattaaaaataaaaagtt 33194140  T
Q  116 attattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    || |||| | ||| ||||||||||||||||| |||||||||    
T  33194141 atcattgca-ttggaaactgaaagtgacattcattttaaaa 33194180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 40487929 - 40487821
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| ||||  |||||||||||||| ||| |||| |  ||||||||||| ||||| |    
T  40487929 taatactttagaagtagtgtatatagtattaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaatc-aaaagtgacattcattttga 40487831  T
Q  155 aatatttttt 164  Q
    ||||||||||    
T  40487830 aatatttttt 40487821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 2458154 - 2458012
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgta-tatattattaattgaaaggtacaattaaaaa-t 108  Q
    ||||| |||||||||||||| |||| ||||||||||||        |||||||| |||||| |||| |||| ||||||||||| |||| |||||||||      
T  2458154 attatcctaatcaactattggtttaattttcattaaagaaaaaaacaatactttggaagtagtgtaatatagtattaattgaagggtataattaaaaaga 2458055  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||    
T  2458054 aaaagttattattgta-ttggaaactgaaagtgacattcatttt 2458012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 50646159 - 50646255
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| ||||||||||||||| |||||||| || ||||||||| ||||  |||||||||||||| | ||| |||||||||||||||||||||||    
T  50646159 taatacttttgaagtaatgtatatagtattaattaaatggtacaattgaaaagaaaaagttattattgca-ttggaaactgaaagtgacatttatttt 50646255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 39356960 - 39356886
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||||||||||||| |||| |||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  39356960 tattaattgaaaggtacaattgaaaagaaaatgttattattgcatt-gaaaactgaaagtgacatttattttaaaa 39356886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 36844747 - 36844881
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    ||||| |||||||||||||||||  |||||||||||||       ||||||||| |||||| |||||||| ||||||||||| | ||||||| ||||  |    
T  36844747 attatcctaatcaactattgattagtttttcattaaagaaaaca-taatactttggaagtagtgtatataatattaattgaatgatacaattgaaaagaa 36844845  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatt 146  Q
    ||| ||||||||| | |||||||||||||||||||||    
T  36844846 aaaattattattgca-ttgaaaactgaaagtgacatt 36844881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 38141095 - 38140943
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    |||||||||||||| ||||| ||| |||||||||||||       || || ||| |||||| |||||||| ||||||||||| || ||||| ||||| ||    
T  38141095 attattctaatcaattattggtttgtttttcattaaagaaaaaatta-tattttggaagtagtgtatatagtattaattgaagggcacaatgaaaaaaaa 38140997  T
Q  111 aa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    || |||||||||| | ||| ||||||||||||||||| ||||| ||| |||||||    
T  38140996 aaggttattattgca-ttggaaactgaaagtgacattcattttgaaacatttttt 38140943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 42072123 - 42071986
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagtta 116  Q
    ||||||||||||||||| |||| ||||||||       ||||||||||||||||||||||||| ||||||||||| |||||| || ||||  ||||||||    
T  42072123 taatcaactattgatttgttttccattaaagaaaaca-taatactttagaagtaatgtatataatattaattgaagggtacagttgaaaagaaaaagtta 42072025  T
Q  117 ttattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||| | ||| ||||| ||| ||||||  |||||||||    
T  42072024 ttattgca-ttggaaactaaaaatgacatccattttaaaa 42071986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 45213726 - 45213871
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgta-tatattattaattgaaaggtacaattaaaaata 109  Q
    |||||||||||||||||||| |||  ||||||||||||       |||||||||  ||||| |||| |||| ||||||||||| ||||||||| |||| |    
T  45213726 attattctaatcaactattggtttgcttttcattaaagaaaaaa-taatactttgaaagtagtgtaatatagtattaattgaagggtacaattgaaaaga 45213824  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||| |||||||||| ||| |||| |||||||||||||| |||||||||    
T  45213825 aaaagttattattgcattagaaa-ctgaaagtgacattcattttaaaa 45213871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 51398156 - 51398015
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| ||||||||||||||||||||||||||||||||       ||||| ||| |||||| ||| | ||| ||||||||||| ||||||||| ||||      
T  51398156 attatcctaatcaactattgatttatttttcattaaag-aaaaaataatattttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 51398058  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||  | ||||||||| |||||||||||||||||    
T  51398057 aaaagttattattaca-ttgaaaactaaaagtgacatttatttt 51398015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 8817286 - 8817136
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatata--ttattaattgaaaggtacaattaaaaat 108  Q
    ||||||||||||||||||||||||||||||||||||||       |||||| ||||||||| ||| ||||   |||||||| |||||||||||| ||       
T  8817286 attattctaatcaactattgatttatttttcattaaag-aaaaaataatacattagaagtagtgtgtataatatattaattaaaaggtacaattgaagga 8817188  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattttaaaatattt 161  Q
    |||| ||||||||| | |||| |||||||| | ||||| ||||||||| ||||    
T  8817187 aaaaattattattgca-ttgataactgaaaataacattcattttaaaacattt 8817136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 30431266 - 30431103
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgta-tatattattaattgaaaggtacaattaaaaata 109  Q
    ||||| ||||||||||||||| || |||||||||| ||       ||||||||| |||||| |||| |||| ||||||||||| | ||||||| |||| |    
T  30431266 attatcctaatcaactattgacttgtttttcattagagaaaaaa-taatactttggaagtagtgtaatataatattaattgaaggttacaattgaaaaga 30431168  T
Q  110 aaag-ttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaa 174  Q
    |||  ||||||||| ||| ||||||||||||||||||| ||||| ||||| |||||  ||||||||    
T  30431167 aaaaattattattgcatt-gaaaactgaaagtgacattcattttgaaataatttttttggctaaaa 30431103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 9189484 - 9189592
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||| ||| ||||||||||||||| ||||||||||| | || | || |||| |||| |||||||||  ||| ||||||||||||||||||| |||||||    
T  9189484 taatattttggaagtaatgtatatagtattaattgaatgatatatttgaaaagaaaaagttattatttcatt-gaaaactgaaagtgacattcattttaa 9189582  T
Q  155 aatatttttt 164  Q
    |||| |||||    
T  9189583 aataattttt 9189592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 50038220 - 50038320
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    |||||||||||||||| |||  | | ||||||||| | ||||||||| |||| |||| |||||||||| ||| ||||||||||||||||||| |||||||    
T  50038220 taatactttagaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaagttattattgcatt-gaaaactgaaagtgacattcattttaa 50038318  T
Q  155 aa 156  Q
    ||    
T  50038319 aa 50038320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 4759066 - 4758992
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||||||||||||| |||| |||| |||||||||| ||| ||||  |||||||||||||||||||||||    
T  4759066 tattaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaag-tgaaagtgacatttattttaaaa 4758992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 35557768 - 35557907
Alignment:
Q  17 ctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaataaaagt 114  Q
    |||||||||||||| |||||||||||||||||       ||||||||| |||||| ||||  ||| || |||||||||||||||||| ||||  |||| |    
T  35557768 ctaatcaactattggtttatttttcattaaagaaaaaa-taatactttggaagtagtgtaacatagtaataattgaaaggtacaattgaaaagaaaaaat 35557866  T
Q  115 tattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||| | ||| ||||||||||||| || ||||||||||    
T  35557867 tattattgca-ttggaaactgaaagtgatatatattttaaaa 35557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 19373725 - 19373599
Alignment:
Q  17 ctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaat-aaaagtt 115  Q
    |||||||||||||| ||| |||||||||||||       ||| ||||| |||||| |||||||  ||||||||||| ||||||||| ||||| |||||||    
T  19373725 ctaatcaactattggtttgtttttcattaaagaaaaaa-taaaactttggaagtagtgtatatgatattaattgaagggtacaattgaaaataaaaagtt 19373627  T
Q  116 attattgtatttgaaaactgaaagtgaca 144  Q
    |||||| |  ||||||| |||||||||||    
T  19373626 attatt-tcattgaaaattgaaagtgaca 19373599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 22857191 - 22857091
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||| |||||||||| |||||||| |||||||||||  |||||||| ||||  |||||||||||||  | |||||||  |||||||||||| |||||||    
T  22857191 taatattttagaagtagtgtatataatattaattgaacagtacaattgaaaagaaaaagttattattaca-ttgaaaatcgaaagtgacattcattttaa 22857093  T
Q  155 aa 156  Q
    ||    
T  22857092 aa 22857091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 50346763 - 50346635
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaagttat 117  Q
    |||| |||||||||||| |||||||||||||       |||||  || |||||||||||| ||||||| |||||| ||||||||| |||| ||||  |||    
T  50346763 taattaactattgatttgtttttcattaaagaaaaaa-taatatgttggaagtaatgtatttattattgattgaagggtacaattgaaaagaaaatgtat 50346665  T
Q  118 tattgtatttgaaaactgaaagtgacattta 148  Q
    ||||| | ||||||||| ||| |||||||||    
T  50346664 tattgca-ttgaaaactcaaaatgacattta 50346635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 3152881 - 3152951
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||| ||||||||| |||| |||| |||||||||| ||| ||||||||||||||||||| |||||    
T  3152881 tattaattgaagggtacaattgaaaagaaaaagttattattgcatt-gaaaactgaaagtgacattcatttt 3152951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 156
Target Start/End: Original strand, 11019883 - 11019975
Alignment:
Q  66 gaagtaatgtatatat--tattaattgaaaggtacaattaaaaataaaag-ttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||| ||||  ||||||||||||||||| ||| |||| ||||  ||||||||| ||| ||||| ||||||||||||| |||||||||    
T  11019883 gaagtaatgtacatatagtattaattgaaaggtacgattgaaaagaaaaaattattattgcatt-gaaaaatgaaagtgacattaattttaaaa 11019975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 36729858 - 36729955
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| |||||||||||  ||| ||||||||||| ||||||||| ||||  |||||||||||||| | ||| ||| ||||||||||||| |||||    
T  36729858 taatactttggaagtaatgtaacataatattaattgaagggtacaattgaaaagaaaaagttattattgca-ttggaaattgaaagtgacattcatttt 36729955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 52654351 - 52654310
Alignment:
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattt 151  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  52654351 aaaagttattattgtatt-gaaaactgaaagtgacatttattt 52654310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 31583483 - 31583583
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaag-ttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| |||  | | ||||||||| ||||||||||| |||| ||||| ||||||||| | | |||| |||||||||||||| |||||||    
T  31583483 taatactttggaagtagtgtgcagagtattaattggaaggtacaattgaaaagaaaagattattattgcactggaaa-ctgaaagtgacattaattttaa 31583581  T
Q  155 aa 156  Q
    ||    
T  31583582 aa 31583583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 36460951 - 36460799
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||| ||||       ||||||||| |||||| | ||  ||| ||||||||||| ||| ||||| |||| |    
T  36460951 attatcctaatcaactattggtttgtttttcatcaaagaaaaa--taatactttggaagtagtataacataatattaattgaagggtgcaattgaaaaga 36460854  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||| |||||||||| ||| ||||||||||||||| ||| ||||| ||| |||||||    
T  36460853 aaaagttattattgcatt-gaaaactgaaagtgatattcattttgaaacatttttt 36460799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 38016520 - 38016380
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||  ||| |||||||||||||       ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| |||| |    
T  38016520 attatcctaatcaactattagtttgtttttcattaaagaaaaaa-taatactttggaagtagtgtaacatagtattaattgaa-ggtacaattgaaaaga 38016423  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||| |||||||||| ||| |||| |||||||||||||| |||||    
T  38016422 aaaagttattattgcattggaaa-ctgaaagtgacattcatttt 38016380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 30934858 - 30934914
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa 112  Q
    |||||||||||||||| |||||||| ||||||||||  ||||||||| |||| ||||    
T  30934858 taatactttagaagtagtgtatatagtattaattgaggggtacaattgaaaagaaaa 30934914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 30426399 - 30426469
Alignment:
Q  82 tattaattgaaaggtacaattaaaaa-taaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||| ||||||||||||||  |||||||||||||| | ||| ||||||||| ||||||| |||||    
T  30426399 tattaattgaagggtacaattaaaaagaaaaagttattattgca-ttggaaactgaaaatgacattcatttt 30426469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 33024375 - 33024457
Alignment:
Q  82 tattaattgaaaggtacaattaaaaata-aaagttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||||||||||| ||| ||||| |||| | ||||||||||||| ||| |||| |||||||| ||||| ||||||||||| |||||    
T  33024375 tattaattgaatggtgcaattgaaaagataaagttattattgcattggaaa-ctgaaagtaacattcattttaaaataattttt 33024457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 26057812 - 26057856
Alignment:
Q  68 agtaatgtatatattattaattgaaaggtacaattaaaaataaaa 112  Q
    ||||||||||||||||||||||  |||||||||| ||||| ||||    
T  26057812 agtaatgtatatattattaattagaaggtacaataaaaaaaaaaa 26057856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 165
Target Start/End: Original strand, 32492256 - 32492339
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttg 165  Q
    ||||||||||| |||| |||| |||| |||| |||||||||| ||| ||||| ||||||||||||| ||||| ||| | ||||||    
T  32492256 tattaattgaatggtataattgaaaagaaaaagttattattgcatt-gaaaattgaaagtgacattcattttgaaacaatttttg 32492339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 47823517 - 47823600
Alignment:
Q  73 tgtatatattattaattgaaaggtacaattaaaaa-taaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||| |||||||||||   ||||||||||||  |||| ||||||||| | || |||||| ||| |||||||||||||||||    
T  47823517 tgtatatagtattaattgaagaatacaattaaaaagaaaaaattattattgca-ttaaaaactaaaaatgacatttattttaaaa 47823600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 9e-22; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 28289360 - 28289220
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    ||||| |||||||||||||| ||| |||||||||||||       |||||||||  ||||| |||||||| ||||||||| ||||||||||| |||| ||    
T  28289360 attatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttgaaagtagtgtatatagtattaattg-aaggtacaattgaaaagaa 28289262  T
Q  111 aa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    || |||||||||| | ||||||||| |||||||||||||||||    
T  28289261 aatgttattattgca-ttgaaaactcaaagtgacatttatttt 28289220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 19105013 - 19105151
Alignment:
Q  17 ctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagtt 115  Q
    |||||||||||||||||| || ||||||||||       ||||  |||| |||||||||||||| ||||||||||| ||||||||| ||||  |||||||    
T  19105013 ctaatcaactattgatttgttcttcattaaagaaaaaa-taatgttttaaaagtaatgtatatagtattaattgaagggtacaattgaaaagaaaaagtt 19105111  T
Q  116 attattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||| | || |||||||||||||||||| |||||||||    
T  19105112 attattgca-ttaaaaactgaaagtgacattcattttaaaa 19105151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 10476237 - 10476129
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| |||||||| ||||||||||| ||||||||| ||||  |||||||||||||| | ||| ||| ||||||||||||| |||||||    
T  10476237 taatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaagttattattgca-ttggaaagtgaaagtgacattcattttaa 10476139  T
Q  155 aatatttttt 164  Q
    |||| |||||    
T  10476138 aataattttt 10476129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 30312559 - 30312459
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| |||||| | ||||||||||| ||||||||| ||||  |||| ||||||||||| |||||||| |||||||||||| |||||||    
T  30312559 taatactttggaagtagtgtatacaatattaattgaagggtacaattgaaaagaaaaaattattattgta-ttgaaaaccgaaagtgacattcattttaa 30312461  T
Q  155 aa 156  Q
    ||    
T  30312460 aa 30312459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 33939739 - 33939884
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    |||||||||||||||| ||| |||||||||||||||||       ||||||||| ||| || |||||||| ||||||||||| |||||||||  |||  |    
T  33939739 attattctaatcaactgttggtttatttttcattaaagaaaaaagtaatactttggaattagtgtatataatattaattgaatggtacaattggaaagaa 33939838  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||||  | ||| ||||  ||||||||||| |||||||||    
T  33939839 aaagttattattaca-ttggaaaccaaaagtgacattcattttaaaa 33939884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 40753435 - 40753575
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    |||||||||||||||||||| ||| |||||||||||||       |||||||||  ||||| |||||||| ||||||||||| ||||||||| ||||  |    
T  40753435 attattctaatcaactattggtttgtttttcattaaagaaaaa--taatactttgaaagtagtgtatatagtattaattgaatggtacaattgaaaagaa 40753532  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttatttta 153  Q
    ||| ||||||||  | ||||||||||||| ||||||| ||||||    
T  40753533 aaaattattattaca-ttgaaaactgaaaatgacattcatttta 40753575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 27947506 - 27947649
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||||||| |||||||||||||       | || |||| |||||| ||||  ||| ||||||||||| ||||||||| |||| |    
T  27947506 attatcctaatcaactattgatttgtttttcattaaagaaaaaa-tcatcctttggaagtagtgtagcataatattaattgaagggtacaattgaaaaga 27947604  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||| |||||||||| ||| ||||||||||||||||||| |||||||    
T  27947605 aaaagttattattgcatt-gaaaactgaaagtgacattcattttaa 27947649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 21819428 - 21819303
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    ||||| ||||| |||||||| ||| |||||||||||||       ||||| ||| ||||||||||||||| ||||||||||| | ||||||| |||| |     
T  21819428 attatcctaataaactattggtttgtttttcattaaagaaaaaa-taatattttggaagtaatgtatatagtattaattgaatgatacaattgaaaaaag 21819330  T
Q  111 aagttattattgtatttgaaaactgaaa 138  Q
    || ||||||||||| |||||||||||||    
T  21819329 aatttattattgta-ttgaaaactgaaa 21819303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 24680274 - 24680129
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatg-tatatattattaattgaaaggtacaatt-aaaaat 108  Q
    |||||||||||||||||||||||| |||||||||||||       ||||||||| |||||||||  | |||  ||||||| || ||||||||| ||||      
T  24680274 attattctaatcaactattgatttgtttttcattaaag-aaaaaataatactttggaagtaatgcaacatagcattaattaaagggtacaattgaaaaga 24680176  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||||||||| | ||| ||||||||| ||||||| |||||||||    
T  24680175 aaaagttattattgca-ttggaaactgaaaatgacattcattttaaaa 24680129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 35777965 - 35777824
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgta-tatattattaattgaaaggtacaattaaaaata 109  Q
    ||||| ||||| |||||||| ||| |||||||||||||       ||||||||| |||||| |||| |||| || |||||||| ||||||||| ||||||    
T  35777965 attatcctaataaactattggtttgtttttcattaaagaaaaaa-taatactttggaagtagtgtaatatagtactaattgaagggtacaattgaaaata 35777867  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||| |||||||||| ||| |||| | ||||||||||||||||||    
T  35777866 aaaagttattattgcattagaaacc-gaaagtgacatttatttt 35777824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 40339604 - 40339472
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtata-tattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||        |||||||| |||||| |||||| || ||||||||||| ||||||||| ||||      
T  40339604 attatcctaatcaactattggtttgtttttcattaaagaaaaaag-aatactttggaagtagtgtataataatattaattgaagggtacaattgaaaaat 40339506  T
Q  110 aaagttattattgtatttgaaaactgaaagtgaca 144  Q
    ||||||||||||| | ||||||| |||||||||||    
T  40339505 aaagttattattgca-ttgaaaattgaaagtgaca 40339472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 48843698 - 48843553
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    ||||| |||||||||||||| ||| |||||||||||||       |||||| || |||||| |||||||| |||||| | || |||| |||| || | ||    
T  48843698 attatcctaatcaactattggtttgtttttcattaaagaaaaaaataatacgttggaagtagtgtatatagtattaaattaagggtataattgaagagaa 48843599  T
Q  111 aag-ttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||  ||||||||| ||| ||||||||||||||||||| |||||||||    
T  48843598 aaaattattattgcatt-gaaaactgaaagtgacattcattttaaaa 48843553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 21752117 - 21752257
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    |||||||||||||||||||| ||| |||||||||||||       |||||||||  || || |||||||| | ||||||||| ||||||||| |||   |    
T  21752117 attattctaatcaactattggtttgtttttcattaaag-ataaaataatactttgaaaatagtgtatataatgttaattgaatggtacaattgaaacgaa 21752215  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||||| | ||| ||||||||| |||||||||||||    
T  21752216 aaagttattattgca-ttggaaactgaaaatgacatttatttt 21752257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 44453237 - 44453134
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata-aaagttattattgtatttgaaaactgaaagtgacatttatttta 153  Q
    |||||||||||||||| ||||  ||| ||||||||||| ||||||||| |||| | ||||||||||||| ||| |||| |||||||||||||| |||| |    
T  44453237 taatactttagaagtagtgtaacatagtattaattgaagggtacaattgaaaaaagaaagttattattgcattggaaa-ctgaaagtgacattcatttaa 44453139  T
Q  154 aaata 158  Q
    |||||    
T  44453138 aaata 44453134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 1742137 - 1741974
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       |||||||||  ||||| ||||  ||| ||||||||||| ||||||||| |||| |    
T  1742137 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 1742039  T
Q  110 aaag-ttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaa 174  Q
    |||| ||||||||| ||| |||| |||||||||||||| ||||| ||| |  |||| |||||||||    
T  1742038 aaaggttattattgcattggaaa-ctgaaagtgacattcattttgaaacaactttttgggctaaaa 1741974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 29636276 - 29636373
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt--aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||||| |||||||| ||||||||||| | |  ||||  ||||| | |||||||||||| ||| | |||||||||||||||||||||||    
T  29636276 taatactttagaagtagtgtatatagtattaattgaaggatgtaattgaaaaaaaagaagttattattgcattag-aaactgaaagtgacatttatttt 29636373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 6747327 - 6747238
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatt 146  Q
    ||||||||| |||||| |||  | | ||||||||| | |||||||||||||| |||||||||||||| | ||| |||||||||||||||||    
T  6747327 taatactttggaagtagtgtgcagagtattaattggagggtacaattaaaaagaaaagttattattgca-ttggaaactgaaagtgacatt 6747238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 37490866 - 37490789
Alignment:
Q  75 tatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||| ||||||||||||||||||||| ||||  |||| ||||||||| | ||||||||||||||||||||| |||||    
T  37490866 tatatagtattaattgaaaggtacaattgaaaagaaaaaattattattgca-ttgaaaactgaaagtgacattcatttt 37490789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 25440973 - 25440865
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| |||  | | ||||||||| | ||||||||| |||| |||| |||||||||| ||| |||| ||||||||||||| ||||||||    
T  25440973 taatactttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaa-ctgaaagtgacatatattttaa 25440875  T
Q  155 aatatttttt 164  Q
    |||| |||||    
T  25440874 aataattttt 25440865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 7759361 - 7759255
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaa 155  Q
    |||||||||  ||||| |||||||| |||||||||||  | ||| ||||||| || | |||||||| |||| ||||||||||| |||||||  |||||||    
T  7759361 taatactttgaaagtagtgtatataatattaattgaagagcacagttaaaaaaaata-ttattattatatt-gaaaactgaaaatgacattccttttaaa 7759264  T
Q  156 atatttttt 164  Q
    |||||||||    
T  7759263 atatttttt 7759255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 42753844 - 42753713
Alignment:
Q  17 ctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaa-agtt 115  Q
    |||||||||||||| ||||||||||||||||        |||||||||| || || |||||||| ||||||||| ||||||| ||| |||| |||  |||    
T  42753844 ctaatcaactattggtttatttttcattaaa---aaaaataatactttaaaaatagtgtatataatattaattg-aaggtacgattgaaaagaaagtgtt 42753749  T
Q  116 attattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| ||| ||| ||||||||||||| |||||    
T  42753748 attattgta-ttggaaattgaaagtgacattcatttt 42753713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 13405132 - 13405277
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||        ||||||||  ||||| ||||  ||| ||||||||||| ||||||||| |||| |    
T  13405132 attatcctaatcaactattggtttgtttttcattaaagaaaaaac-aatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 13405230  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||| |||||||||  ||| |||| |||||||||||||| |||||||||    
T  13405231 aaaagttattattacattggaaa-ctgaaagtgacattcattttaaaa 13405277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 39557353 - 39557315
Alignment:
Q  126 ttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  39557353 ttgaaaactgaaagtgacatttattttaaaataattttt 39557315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 45948679 - 45948776
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||| ||| |||||||||||  ||| ||||||||||| ||||||||| ||||  |||||||||||||| | ||| ||||||||||||||||| |||||    
T  45948679 taatattttggaagtaatgtaacatagtattaattgaagggtacaattgaaaagaaaaagttattattgca-ttggaaactgaaagtgacattcatttt 45948776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 1031256 - 1031160
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||| ||| |||||| |||||||| |||||||||||  |||||||| ||||||||| |||||||||| |  || |||||||| |||||||| |||||    
T  1031256 taataatttggaagtagtgtatatagtattaattgaagagtacaattgaaaataaaatgttattattgca-atggaaactgaaggtgacattcatttt 1031160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 8604076 - 8603976
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggta-caattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| |||||||| ||||||||||| |||| || | ||||  |||||||||||||| | ||| ||| |||||||||| || |||||||    
T  8604076 taatactttggaagtagtgtatatagtattaattgaagggtatcattgaaaagaaaaagttattattgca-ttggaaattgaaagtgacgttcattttaa 8603978  T
Q  155 aa 156  Q
    ||    
T  8603977 aa 8603976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 31418518 - 31418659
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| ||||||||||||| |||| ||||| |||||||       ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| ||||      
T  31418518 attatcctaatcaactattaatttgtttttaattaaagaaaaaa-taatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 31418616  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||| | ||| ||||||||||||  |||||||||    
T  31418617 aaaagttattattgca-ttggaaactgaaagtggaatttatttt 31418659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 34274895 - 34274799
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| || ||| ||| || | ||||||||| | |||||||||||||| |||| |||||||||| | ||| ||||||||||||||||| |||||    
T  34274895 taatactttggatgtagtgtgtagagtattaattggagggtacaattaaaaagaaaaggttattattgca-ttggaaactgaaagtgacattcatttt 34274799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 6563424 - 6563563
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    ||||| ||||||||| |||| ||| |||||||||||||       ||||||||| ||||||     |||| ||||||||||| ||||||||| ||||  |    
T  6563424 attatcctaatcaaccattggtttgtttttcattaaagaaaaaaataatactttggaagta-----tataatattaattgaagggtacaattgaaaagaa 6563518  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaa 155  Q
    ||||||||||||  | || ||||||||||||||| || ||||||||    
T  6563519 aaagttattatt-aaattaaaaactgaaagtgacgttcattttaaa 6563563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 36808010 - 36807927
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttg 165  Q
    |||||||||||  |||||||| |||| |||| |||||||||||||| |||||  |||| ||||||||||||||||| | ||||||    
T  36808010 tattaattgaagagtacaattgaaaagaaaaagttattattgtatt-gaaaagcgaaaatgacatttattttaaaacaatttttg 36807927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 27935814 - 27935768
Alignment:
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  27935814 aaaagttattattgcatt-gaaaactgaaagtgacattcattttaaaa 27935768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 34012252 - 34012162
Alignment:
Q  66 gaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||| | |||||| ||||||||||| ||||||||| ||||| ||||||||||| |  | ||| ||||| ||||||||||| |||||||||    
T  34012252 gaagtagtttatatagtattaattgaagggtacaattgaaaaaaaaaagttattagtaca-ttggaaacttaaagtgacattcattttaaaa 34012162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 42880010 - 42880080
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||| ||||||||| |||| |||| |||||||||  ||| ||||||||||||||||||| |||||    
T  42880010 tattaattgaagggtacaattgaaaagaaaaagttattattacatt-gaaaactgaaagtgacattcatttt 42880080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 45933637 - 45933734
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||||||| || ||||  ||| ||||||||||| ||| ||||| |||| ||||   ||||||| ||| ||||||||||||||||||| |||||||    
T  45933637 taatactttagaaatagtgtaacatagtattaattgaagggtgcaattgaaaagaaaa---attattgcatt-gaaaactgaaagtgacattcattttaa 45933732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 48684798 - 48684728
Alignment:
Q  82 tattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||||||||||||| ||||  |||||||||||||| | ||| |||| |||||||||||| |||||    
T  48684798 tattaattgaaaggtacaattgaaaagaaaaagttattattgca-ttggaaaccgaaagtgacattcatttt 48684728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 10599287 - 10599206
Alignment:
Q  83 attaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    |||||| |||| |||||||| |||| |||| |||||||||| ||| ||||||||||||||| ||| ||||| ||| |||||||    
T  10599287 attaatagaaaagtacaattgaaaagaaaaagttattattgcatt-gaaaactgaaagtgatattcattttgaaacatttttt 10599206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 23935496 - 23935423
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||| |||||| | ||||  |||||||||||||| | ||| |||||||||  ||||||||||||||||    
T  23935496 tattaattgaagggtacattgaaaagaaaaagttattattgca-ttggaaactgaaaacgacatttattttaaaa 23935423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 32501855 - 32501899
Alignment:
Q  111 aagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||    
T  32501855 aagttattattgcatt-gaaaactgaaagtgatatttattttaaaa 32501899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 34012602 - 34012565
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  34012602 attatcctaatcaactattgatttgtttttcattaaag 34012565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 37815870 - 37815833
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  37815870 attatcctaatcaactattgatttgtttttcattaaag 37815833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 4268713 - 4268657
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa 112  Q
    ||||| ||| |||||||| |||||| ||||||||| ||||||||||| |||| ||||    
T  4268713 taataatttggaagtaatatatatagtattaattggaaggtacaattgaaaacaaaa 4268657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 9e-22; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 39566329 - 39566184
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||||||| |||||||||||||       ||||||||| |||||| ||||  ||||||||||||||| ||||||||| |||| |    
T  39566329 attatcctaatcaactattgatttgtttttcattaaagagaaaa-taatactttggaagtagtgtaacatattattaattgaagggtacaattgaaaaga 39566231  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||| |||||||||| ||| |||| |||||||||||||| |||||||||    
T  39566230 aaaagttattattgcattggaaa-ctgaaagtgacattcattttaaaa 39566184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 36165032 - 36164880
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    ||||| |||||||||||||||||| ||||| |||||||       ||||| ||| ||||||||||||||| ||||||||||| |||| |||| ||||  |    
T  36165032 attatcctaatcaactattgatttgttttttattaaagaaaaaa-taatattttggaagtaatgtatatagtattaattgaagggtataattgaaaagaa 36164934  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    |||||||||| || | ||| ||||||||| ||||||| ||||||||||| |||||    
T  36164933 aaagttattactgca-ttggaaactgaaaatgacattcattttaaaataattttt 36164880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 6519123 - 6518981
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||||||| |||||||||||||       |||||||||  ||||| ||| | ||| ||||||||||| ||||||||| ||||      
T  6519123 attatcctaatcaactattgatttgtttttcattaaagaaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 6519024  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||| | |||||||||||||| |||||| |||||    
T  6519023 aaaagttattattgca-ttgaaaactgaaagcgacattcatttt 6518981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 27797916 - 27797774
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gtta 116  Q
    ||||||||||||| ||| |||||||||||||       ||||||||| ||||||||  ||||| |||||| |||| ||||||||| |||| |||| ||||    
T  27797916 taatcaactattggtttgtttttcattaaagaaaaa--taatactttggaagtaat--atatagtattaactgaagggtacaattgaaaagaaaaagtta 27797821  T
Q  117 ttattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    |||||| ||| |||| |||||||||||||| ||||||||||| |||||    
T  27797820 ttattgcattggaaa-ctgaaagtgacattcattttaaaataattttt 27797774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 4630966 - 4630866
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| ||| || | ||||||||| | | ||||||| |||| |||| |||||||||||||| |||||||||||||||||||||||||||    
T  4630966 taatactttggaagtagtgtgtaaagtattaattggaggatacaattgaaaagaaaaagttattattgtatt-gaaaactgaaagtgacatttattttaa 4630868  T
Q  155 aa 156  Q
    ||    
T  4630867 aa 4630866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 34446034 - 34446175
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| |||| |    
T  34446034 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 34446132  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||| |||||||||||| ||||||||||||| ||||||| |||||    
T  34446133 aaatgttattattgta-ttgaaaactgaaaatgacattcatttt 34446175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 15167019 - 15167167
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    ||||| ||| |||||||||| || ||||||||||||||       ||||| ||| |||||| |||||||| || ||||||||  ||| |||| |||| ||    
T  15167019 attatcctagtcaactattggttaatttttcattaaagaaaaaa-taatattttggaagtagtgtatatagtaataattgaagagtaaaattgaaaaaaa 15167117  T
Q  111 aagttattattgtatttgaaaactgaaagtgacatttattttaaaatattt 161  Q
    |||||||||||| | ||||||||||||||||||||| ||||| ||| ||||    
T  15167118 aagttattattgca-ttgaaaactgaaagtgacattcattttgaaacattt 15167167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 3306023 - 3306169
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaag-tt 115  Q
    ||||||||||||||||| |||||||||||||       ||||||||| |||||| ||||  | | ||||||||||| ||||||||| |||| ||||  ||    
T  3306023 taatcaactattgatttgtttttcattaaagaaaaaa-taatactttggaagtagtgtaacagagtattaattgaagggtacaattgaaaagaaaaaatt 3306121  T
Q  116 attattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||||||| ||| |||| |||||||||||||| ||||||||||| |||||    
T  3306122 attattgcattggaaa-ctgaaagtgacattcattttaaaataattttt 3306169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 14620545 - 14620654
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttta 153  Q
    ||||||||| |||||| ||||  ||| ||||||||||||||||||||| ||||  |||||||||||||| | ||| ||||||||||||||||| |||||     
T  14620545 taatactttggaagtagtgtaacataatattaattgaaaggtacaattgaaaagaaaaagttattattgca-ttggaaactgaaagtgacattcattttg 14620643  T
Q  154 aaatatttttt 164  Q
    ||||| |||||    
T  14620644 aaataattttt 14620654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 35765952 - 35766048
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||||| || ||| || | ||||||||| | ||||||||| |||| |||| |||||||||||||| ||||||||||||||||||| |||||    
T  35765952 taatactttagaattagtgtgtagagtattaattggacggtacaattgaaaagaaaaagttattattgtatt-gaaaactgaaagtgacattcatttt 35766048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 4425076 - 4424978
Alignment:
Q  56 taatactttagaagtaatgta-tatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| |||| |||| ||||||||||||||||||||| |||| ||||  |||| || || |||||||| |||||||| |||||||||||    
T  4425076 taatactttggaagtagtgtaatatagtattaattgaaaggtacaattgaaaagaaaa--tattgtttta-ttgaaaaccgaaagtgatatttattttaa 4424980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 11977733 - 11977599
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    ||||| |||||||||||||| ||| || ||||||||||       ||||||||| |||||| |||||||| |||||||| || | ||||||| |||| ||    
T  11977733 attatcctaatcaactattggtttgttgttcattaaagaaaaaa-taatactttggaagtagtgtatataatattaattaaaggatacaattgaaaagaa 11977635  T
Q  111 aa-gttattattgtatttgaaaactgaaagtgacatt 146  Q
    || |||||||| ||||| |||| ||||||||||||||    
T  11977634 aaagttattatggtattggaaa-ctgaaagtgacatt 11977599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 26660893 - 26660756
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaa-gtt 115  Q
    ||||||||||||| ||| |||||||||||||       ||||||| |||||||| | ||  ||| ||||||||||| ||||||||| |||| |||| |||    
T  26660893 taatcaactattggtttgtttttcattaaagaaaaa--taatactctagaagtagtataacatagtattaattgaagggtacaattgaaaagaaaaagtt 26660796  T
Q  116 attattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||| ||| ||||| ||||||||||||| |||||||||    
T  26660795 attattgcatt-gaaaattgaaagtgacattcattttaaaa 26660756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 26932486 - 26932349
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaa-gtt 115  Q
    ||||||||||||| ||| |||||||||||||       ||||||| |||||||| | ||  ||| ||||||||||| ||||||||| |||| |||| |||    
T  26932486 taatcaactattggtttgtttttcattaaagaaaaa--taatactctagaagtagtataacatagtattaattgaagggtacaattgaaaagaaaaagtt 26932389  T
Q  116 attattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||| ||| ||||| ||||||||||||| |||||||||    
T  26932388 attattgcatt-gaaaattgaaagtgacattcattttaaaa 26932349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 7748905 - 7749050
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaata- 109  Q
    ||||||||||| || ||||| ||| |||||||||||||       |||||||||  |||| ||||||||| |||||||| || | ||||||||||||||     
T  7748905 attattctaattaattattggtttgtttttcattaaagaaaaaa-taatactttgaaagttatgtatatagtattaattaaatgatacaattaaaaatat 7749003  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaat 157  Q
    |  |||||||||  | ||||||||||||||||  ||||||||||||||    
T  7749004 acggttattattaca-ttgaaaactgaaagtggtatttattttaaaat 7749050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 7579938 - 7580021
Alignment:
Q  73 tgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||| | |||||||||||  |||||||| |||| |||| |||||||||||||| ||||||||||||| ||||| |||||||||    
T  7579938 tgtatacaatattaattgaagagtacaattgaaaagaaaaagttattattgtatt-gaaaactgaaagtaacattcattttaaaa 7580021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 7721196 - 7721101
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||  |||||||||||||| |||| |||||| | ||||||| |||| |||||||||||||| | ||||||||  ||||||| ||| |||||    
T  7721196 taatactttgaaagtaatgtatataatattgattgaatgatacaattgaaaaaaaaagttattattgca-ttgaaaacataaagtgatattcatttt 7721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 154
Target Start/End: Original strand, 14161952 - 14162051
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaa--ttaaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttta 153  Q
    ||||||||| |||||| |||||||| ||||||||||| |||||||  | ||||  |||| ||||||||| ||| |||| || ||| ||||||||||||||    
T  14161952 taatactttggaagtagtgtatatagtattaattgaatggtacaaattgaaaagaaaaaattattattgcattagaaacct-aaaatgacatttatttta 14162050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 21375729 - 21375821
Alignment:
Q  82 tattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaa 174  Q
    ||||||||||| ||||||||| ||||| ||||   ||| ||| ||| ||||||||||||||||||||||||||||| | |||||  ||||||||    
T  21375729 tattaattgaagggtacaattgaaaaaaaaaaaaaatttttgcatt-gaaaactgaaagtgacatttattttaaaacaatttttttggctaaaa 21375821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 34208945 - 34209045
Alignment:
Q  56 taatactttagaagtaatgta-tatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatt--tgaaaactgaaagtgacatttattt 151  Q
    ||||| ||| |||||| |||| |||| ||||||||||| |||| |||| ||||| |||||||||||||| |||  || ||||||||||||||||| ||||    
T  34208945 taatattttggaagtagtgtaatataatattaattgaagggtataattgaaaaaaaaaagttattattgcattattggaaactgaaagtgacattcattt 34209044  T
Q  152 t 152  Q
    |    
T  34209045 t 34209045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 42661991 - 42662099
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| |||| |||| ||||||||  | ||||||||| ||| | ||||| |||||||    
T  42661991 taatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaaaaaaattattattaca-ttgaaaactaaaaataacattcattttaa 42662089  T
Q  155 aatatttttt 164  Q
    |||| |||||    
T  42662090 aataattttt 42662099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 25768511 - 25768586
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaata 158  Q
    ||||||||| | | |||||||||||| |||||||| ||||  ||| ||||||||||||||||||  |||||||||||    
T  25768511 tattaattggaggatacaattaaaaagaaaagttaatattacatt-gaaaactgaaagtgacatccattttaaaata 25768586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 38362145 - 38362297
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaat-a 109  Q
    ||||| ||||| |||||||| ||||||||| |||||||       |||||||||| ||||| | |||| | |||||||| |  |||| |||| ||||  |    
T  38362145 attatcctaattaactattgttttattttttattaaagaaaaaa-taatactttaaaagtagtatataaagtattaatttatgggtataattgaaaagga 38362243  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||||||||||||| ||| ||||| ||||||||||||| ||||| ||| |||||||    
T  38362244 aaagttattattgcatt-gaaaattgaaagtgacattcattttgaaacatttttt 38362297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 11195165 - 11195082
Alignment:
Q  70 taatgtatatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||  ||||||| |  ||||||||||||| ||| ||| | |||||||    
T  11195165 taatgtatatagtattaattgaaagatacaattaaaaaaaaaa--tattatt-tcattgaaaactgaaattgatattcactttaaaa 11195082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 13761659 - 13761562
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaagtt-attattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| |||| |||| || ||||||| ||| ||||| ||||||||||||| |||||    
T  13761659 taatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaagaaaaatttattattgcatt-gaaaagtgaaagtgacattcatttt 13761562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 21195474 - 21195424
Alignment:
Q  62 tttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa 112  Q
    |||||||||| |||||||| ||||||||||| ||||||||| |||| ||||    
T  21195474 tttagaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaa 21195424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 38369973 - 38369874
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaa-ttaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    |||||||||  ||||| |||||||| |||||||||||  |||||| ||||||  |||||||||||||| ||| ||||  | ||||||| ||| |||||||    
T  38369973 taatactttgaaagtagtgtatataatattaattgaagagtacaatttaaaagaaaaagttattattgcattggaaa--taaaagtgatattcattttaa 38369876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 39335210 - 39335321
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||| ||||| |||||| ||| | ||| ||||||||||| ||||||||| ||||      
T  39335210 attatcctaatcaactattggtttgtttttcattaaagaaaaaaataacactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 39335309  T
Q  109 aaaagttattat 120  Q
    ||||||||||||    
T  39335310 aaaagttattat 39335321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 1309421 - 1309466
Alignment:
Q  67 aagtaatgtatatattattaattgaaaggtacaattaaaaataaaa 112  Q
    ||||| |||||||| |||||||||||||||||| ||||||| ||||    
T  1309421 aagtagtgtatataatattaattgaaaggtacacttaaaaagaaaa 1309466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 7579601 - 7579638
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  7579601 attatcctaatcaactattgatttgtttttcattaaag 7579638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 10344984 - 10345080
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| |||||| |||  | | ||||||||| | ||||||||| |||| |||| |||||||||| ||| |||| |||||||||||||| |||||    
T  10344984 taatactttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaagttattattgcattggaaa-ctgaaagtgacattcatttt 10345080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 27600540 - 27600504
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaa 47  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  27600540 attatcctaatcaactattgatttgtttttcattaaa 27600504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 9940793 - 9940649
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||| ||| |||||| ||| |||| ||||||||||| ||||||||| ||||| |    
T  9940793 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatattttggaagtagtgtgtataatattaattgaagggtacaattgaaaaaga 9940695  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||||| | ||||||||||||||||||| | |||||||||    
T  9940694 aaagttattattgca-ttgaaaactgaaagtgacaatcattttaaaa 9940649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 577207 - 577062
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaata- 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||| ||| |||||| |||||||| ||||||||||| |||| |||| |||  |     
T  577207 attatcctaatcaactattggtttgtttttcattaaagaaaaaaataataatttggaagtagtgtatataatattaattgaagggtataattgaaatgat 577108  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||||| | ||||||||||||||||| | |||||||||||    
T  577107 aaagttattattgca-ttgaaaactgaaagtgatagttattttaaaa 577062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 32193803 - 32193703
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| |||||||| ||||||||||| ||||||||| ||||  |||| ||||||||| ||| | ||||| |||||||||||||||||||    
T  32193803 taatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaaaattattattgcattag-aaactaaaagtgacatttattttaa 32193705  T
Q  155 aa 156  Q
    ||    
T  32193704 aa 32193703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 12459326 - 12459466
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    ||||| |||||||||||||| | | |||||||||||||        |||||||| ||||||||||||||| ||||||||||| |||| |||| ||||  |    
T  12459326 attatcctaatcaactattggtctgtttttcattaaagaaaaaac-aatactttggaagtaatgtatatagtattaattgaagggtataattgaaaagaa 12459424  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||| |||||||||||| | |||| |||||||||||| |||||    
T  12459425 aaagatattattgtattag-aaaccgaaagtgacattcatttt 12459466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 12588606 - 12588519
Alignment:
Q  75 tatatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    |||||||||||||||||| |||| |||  |||| |||||||||||||| ||| | ||||||||||| ||||| |||||||||||||||||    
T  12588606 tatatattattaattgaagggtataatagaaaa-aaaagttattattgcatt-gcaaactgaaagtaacattcattttaaaatatttttt 12588519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 13011397 - 13011495
Alignment:
Q  57 aatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa---gttattattgtatttgaaaactgaaagtgacatttatttta 153  Q
    ||||||||  ||||| |||||||| ||||||||||| |||| ||||||||| ||||    ||||||||||| |||||||||||| |||||||||||||||    
T  13011397 aatactttgaaagtagtgtatatagtattaattgaacggtaaaattaaaaaaaaaatatattattattgta-ttgaaaactgaacgtgacatttatttta 13011495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 18737095 - 18737242
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnn--taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaat 108  Q
    ||||| ||||| |||||||| |||||||||||||||||         || ||||||| ||||| |||||||| |||||||| || |||| |||| ||||     
T  18737095 attatcctaattaactattgttttatttttcattaaagaaaaaataatagtactttaaaagtagtgtatataatattaattaaagggtataattgaaaag 18737194  T
Q  109 aaa-agttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||| ||||||||||| ||| |||| |||||||||||||| |||||||||    
T  18737195 aaagagttattattgcattggaaa-ctgaaagtgacattcattttaaaa 18737242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 10520717 - 10520791
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaag-ttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||| ||||||||| |||| ||||  ||||||||||||| ||||| |||||||||||||||||||||||    
T  10520717 tattaattgaagggtacaattgaaaagaaaaaattattattgtatt-gaaaattgaaagtgacatttattttaaaa 10520791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 31443452 - 31443594
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt--aaaaa 107  Q
    ||||| |||||||||||||||||| ||||| |||||||       ||||||||| ||||| |||||  ||| |||||||||||||||||||||  |||||    
T  31443452 attatcctaatcaactattgatttgttttttattaaagaaaaaa-taatactttggaagttatgtaacatagtattaattgaaaggtacaattgaaaaaa 31443550  T
Q  108 taaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
     |||||||||||||| | ||| ||||||||| | ||||| |||||    
T  31443551 aaaaagttattattgca-ttggaaactgaaaataacattcatttt 31443594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 19675124 - 19674973
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||||||| |||||||||||||        || |||||||||||| || |  ||| ||||||||||| ||||||||| ||||      
T  19675124 attatcctaatcaactattgatttgtttttcattaaagaaaaa---aaaactttagaagtagtgcaacatagtattaattgaatggtacaattgaaaaga 19675028  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    |||||||||||||| | ||| ||||||||| ||||||| ||||| || ||||||||    
T  19675027 aaaagttattattgca-ttggaaactgaaaatgacattcattttgaattatttttt 19674973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 234180 - 234039
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| ||||      
T  234180 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 234082  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||| | ||| ||||| ||||||||||| |||||    
T  234081 aaaagttattattgca-ttggaaactaaaagtgacattcatttt 234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 13503896 - 13504008
Alignment:
Q  56 taatactttagaagtaatgtatatat--tattaattgaaaggtacaattaaaa---ataaaagttattattgtatttgaaaactgaaagtgacatttatt 150  Q
    |||||||||  ||||| |||||||||  ||||||||||| ||||||||| |||   | |||||||||||||| ||| |||| |||||||||||||| |||    
T  13503896 taatactttgaaagtagtgtatatatagtattaattgaagggtacaattgaaataaaaaaaagttattattgcattggaaa-ctgaaagtgacattcatt 13503994  T
Q  151 ttaaaatatttttt 164  Q
    || ||| |||||||    
T  13503995 ttgaaacatttttt 13504008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 24163765 - 24163884
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaag-ttattattgtatttgaaaactgaaagtgacatttatttta 153  Q
    ||||||||| |||||| ||||  ||| |||||||||||| |||||||| |||| ||||  ||||||||| ||| |||| |||||||||||||| ||||||    
T  24163765 taatactttggaagtagtgtaacatagtattaattgaaatgtacaattgaaaagaaaaaattattattgcattggaaa-ctgaaagtgacattcatttta 24163863  T
Q  154 aaatattttttggggctaaaa 174  Q
    ||| | |||||  ||||||||    
T  24163864 aaacaatttttttggctaaaa 24163884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 12322939 - 12323032
Alignment:
Q  57 aatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||| |||||| |||||||| ||||||||||| ||| |||||  ||||||||  |||||||| | ||| ||||||||||||||||| |||||    
T  12322939 aatactttggaagtagtgtatatagtattaattgaagggtgcaatt-gaaataaaaaatattattgca-ttggaaactgaaagtgacattcatttt 12323032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 12063561 - 12063657
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattt 151  Q
    |||||||||||||||| ||||  ||| ||| ||||||| ||||||||| ||||| |||| ||||||||| ||| |||| |||||||||||||| ||||    
T  12063561 taatactttagaagtagtgtaacatagtatcaattgaagggtacaattgaaaaaaaaaaattattattgcattggaaa-ctgaaagtgacattcattt 12063657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 158
Target Start/End: Original strand, 24555941 - 24556082
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaag-tt 115  Q
    ||||||||||||||||| ||||||||||||         ||||||||  || |||||||  ||| |||||||||||  |||||||| |||| ||||  ||    
T  24555941 taatcaactattgatttgtttttcattaaaaaaaaaaaaaatactttgaaaataatgtaacatagtattaattgaagagtacaattgaaaagaaaaaatt 24556040  T
Q  116 attattgtatttgaaaactgaaagtgacatttattttaaaata 158  Q
    ||||||  ||| ||||||||||| |||||||||||||||||||    
T  24556041 attattacatt-gaaaactgaaaatgacatttattttaaaata 24556082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 17552254 - 17552392
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    ||||| ||||||||| |||| ||| |||||||||||||       ||||| ||| |||||| |||||||| |||||||| |||  ||||||| |||| ||    
T  17552254 attatcctaatcaacaattggtttgtttttcattaaagaaaaaaataatattttggaagtagtgtatatagtattaattaaaaattacaattgaaaa-aa 17552352  T
Q  111 aagttattattgtatttgaaaactgaaagtgacatttattt 151  Q
    ||  |||||||| | ||| ||||||||| ||||||| ||||    
T  17552353 aaaatattattgca-ttggaaactgaaaatgacattcattt 17552392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 20226228 - 20226265
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  20226228 attatactaatcaactattgatttgtttttcattaaag 20226265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 22120212 - 22120249
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  22120212 attatactaatcaactattgatttgtttttcattaaag 22120249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 31233707 - 31233786
Alignment:
Q  86 aattgaaaggtacaattaaaaataaaag-ttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttg 165  Q
    ||||||| ||||||||| |||| ||||  ||||||||| | | ||||||||||||||||||| ||||||||| | ||||||    
T  31233707 aattgaagggtacaattgaaaagaaaatattattattgcaat-gaaaactgaaagtgacattcattttaaaacaatttttg 31233786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 17921103 - 17920957
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaatt-aaaaat 108  Q
    |||||||||||||||||||| ||| |||||||||||||       ||||||||| |||||| ||| | ||| |||||||||||  ||||||||  |||      
T  17921103 attattctaatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtaacataatattaattgaagagtacaattgtaaaga 17921004  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||||    
T  17921003 aaaagttattattgca-ttgaaaactgaaagtgacattcattttaaaa 17920957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 6374514 - 6374419
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||| ||||  |||||||||||||| | ||||||||||||||||||||| |||||    
T  6374514 taatactttggaagtaatgtatataatattaattg-aaggtacaattgaaaagaaaaagttattattgca-ttgaaaactgaaagtgacattcatttt 6374419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 9812318 - 9812174
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaat-a 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       |  ||||||  ||||| |||||||| ||||| ||||||||||||||| ||||| |    
T  9812318 attatcctaatcaactattggtttgtttttcattaaagaaaaaattg-tactttgaaagtagtgtatataatattacttgaaaggtacaattgaaaataa 9812220  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||||| ||| | ||||||||||||||||| |||||||||    
T  9812219 aaagttattattgcattag-aaactgaaagtgacattcattttaaaa 9812174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 40228720 - 40228579
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||||||| |||||||||||  ||| |||||||||||| |||||||| |||| |    
T  40228720 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttggaagtaatgtaacataatattaattgaaatgtacaattgaaaaga 40228622  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||| |||||||||| ||| ||||||||||||||||||| |||||    
T  40228621 aaaagttattattgcatt-gaaaactgaaagtgacattcatttt 40228579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 39463404 - 39463264
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    ||||| |||||||||| ||| ||| |||||||||||||       ||||||||| |||||| |||||||| ||||||||||| ||||||||| ||||  |    
T  39463404 attatcctaatcaactgttggtttgtttttcattaaagaaaaaa-taatactttggaagtagtgtatatagtattaattgaagggtacaattgaaaagaa 39463306  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||||| | ||| ||||||||||||||||| |||||    
T  39463305 aaagttattattgca-ttggaaactgaaagtgacattcatttt 39463264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 43084705 - 43084787
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||||||||||||||||||||| |||| |||| |||||||||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  43084705 tattaattgaaaggtacaattgaaaagaaaaagttattattgcatt-gaaaactgaaagtgacattcattttaaaataattttt 43084787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 31233953 - 31234081
Alignment:
Q  17 ctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaagg-tacaattaaaaataaaagtt 115  Q
    |||||||||||||| |||||||||||||||||       ||||| ||||||||||  ||||||| |||||||||||||| ||||||| |||| | |||||    
T  31233953 ctaatcaactattggtttatttttcattaaaggaaaaa-taataatttagaagtaccgtatataatattaattgaaaggatacaattgaaaaaagaagtt 31234051  T
Q  116 attattgtatttgaaaactgaaagtgacatt 146  Q
    ||||||| | || |||||| |||||||||||    
T  31234052 attattgca-ttaaaaactaaaagtgacatt 31234081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 39698673 - 39698836
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||| ||| |||||||||||  ||| ||||||||||| ||||||||| |||| |    
T  39698673 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatattttggaagtaatgtaacatagtattaattgaagggtacaattgaaaaga 39698771  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaa 174  Q
    ||| |||||||||| ||| |||| |||||||||||||| ||||| ||| | |||||  ||||||||    
T  39698772 aaaagttattattgcattggaaa-ctgaaagtgacattcattttgaaacaatttttttggctaaaa 39698836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 515022 - 514867
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatata---ttattaattgaaaggtacaattaaaaa 107  Q
    ||||| |||||||||||||| ||| |||||||||| ||       ||||||||  |||||| ||||||||   |||||||||||| | ||||||| ||||    
T  515022 attatcctaatcaactattggtttgtttttcattatagaaaata-taatacttcggaagtagtgtatatagtattattaattgaaggatacaattgaaaa 514924  T
Q  108 taaaag-ttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
     ||||  ||||||||| ||| ||||| ||||||||||||| |||||||||||||||||    
T  514923 gaaaaaattattattgcatt-gaaaattgaaagtgacattcattttaaaatatttttt 514867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 15750337 - 15750431
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtata---tattattaattgaaaggtacaatt 102  Q
    ||||| |||||||||||||| |||||||||||||||||       ||||||||| |||||| ||||||   |||||||||||||| |||||||||    
T  15750337 attatcctaatcaactattggtttatttttcattaaagaaaaaaataatactttggaagtagtgtatatagtattattaattgaagggtacaatt 15750431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 31693699 - 31693773
Alignment:
Q  82 tattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||||||||||||| ||||  |||||||||||||| | ||||||||||||||||| ||| |||||||||    
T  31693699 tattaattgaaaggtacaattgaaaagaaaaagttattattgca-ttgaaaactgaaagtgatattcattttaaaa 31693773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 5295413 - 5295554
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    ||||| |||||||||||||| ||| ||||| ||||| |       ||||| ||| |||||| |||||||| ||||||||||| ||||||||| ||||  |    
T  5295413 attatcctaatcaactattgctttgttttttattaatgaaaaaaataatattttggaagtagtgtatataatattaattgaagggtacaattgaaaagaa 5295512  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||| ||||||||| ||| | ||||| ||||||||||| |||||    
T  5295513 aaaattattattgcattag-aaacttaaagtgacattcatttt 5295554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 12339803 - 12339704
Alignment:
Q  66 gaagtaatgtatatattattaattgaaaggtacaatt--aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaatattttt 163  Q
    |||||| ||| |||| ||||||||| |  ||||||||  ||||| |||| ||||||||||||| ||||||| ||| ||||||| ||||||||||||||||    
T  12339803 gaagtagtgtgtatactattaattggagtgtacaattggaaaaagaaaaattattattgtatt-gaaaactaaaaatgacattcattttaaaatattttt 12339705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 4760566 - 4760728
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       |||||||||  ||||| ||||  ||| ||||||||||| ||||||||| |||| |    
T  4760566 attatcctaatcaactattggtttgtttttcattaaagaaaaa--taatactttgaaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 4760663  T
Q  110 aaag-ttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaa 174  Q
    |||  ||||| ||| ||| ||||| ||||||||||||| ||||||||| | |||||  ||||||||    
T  4760664 aaaaattattgttgcattggaaaa-tgaaagtgacattcattttaaaacaatttttttggctaaaa 4760728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 37559611 - 37559685
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||| | ||||||||| |||| |||| |||||||||||||| |||| |||||||||||||| |||||||||    
T  37559611 tattaattggagggtacaattgaaaagaaaaagttattattgtattggaaa-ctgaaagtgacattgattttaaaa 37559685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 13367956 - 13368067
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    ||||| |||||||| || || |||||||||||||||||       ||||||||| |||||| |||||||| ||||||||||| ||| ||||| |||| ||    
T  13367956 attatcctaatcaattactggtttatttttcattaaagaaaaaa-taatactttggaagtagtgtatataatattaattgaagggtgcaattgaaaagaa 13368054  T
Q  111 aa-gttattattg 122  Q
    || ||||||||||    
T  13368055 aatgttattattg 13368067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 9880508 - 9880545
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  9880508 attatcctaatcaactattgatttatttttcattaaag 9880545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 43448862 - 43448721
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtata-tattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||  ||| |||||||||||||       |||||||||  ||||||||||   || ||||||||||| ||||||||| |||||     
T  43448862 attatcctaatcaactattagtttgtttttcattaaagaaaaaa-taatactttgaaagtaatgtaacgtagtattaattgaagggtacaattgaaaaaa 43448764  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||| | ||| ||||||||||||| ||| |||||    
T  43448763 aaaagttattattgca-ttggaaactgaaagtgatattcatttt 43448721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 156
Target Start/End: Original strand, 2375910 - 2375993
Alignment:
Q  73 tgtatatattattaattgaaaggtacaattaaaaata-aaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||||||||||||||| |||||| ||||||| | |||||| |||||||| || |||||||||| ||| | | |||||||||    
T  2375910 tgtatatattattaattgaagggtacagttaaaaagataaagttgttattgta-ttaaaaactgaaaatgataatcattttaaaa 2375993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 29312198 - 29312353
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnn--taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaat 108  Q
    ||||| |||||||||||||| ||| |||||||||||||         || |||||  |||||| |||||||| |||||||||||  |||||||| ||||     
T  29312198 attatactaatcaactattggtttgtttttcattaaagaaaaaataatactacttctgaagtagtgtatatagtattaattgaagagtacaattgaaaac 29312297  T
Q  109 aaa-agttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    |||  |||||||||| | ||| ||||||||| ||||||| ||||||||  |||||||    
T  29312298 aaacggttattattgca-ttggaaactgaaaatgacattcattttaaacaatttttt 29312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 39765912 - 39766007
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| |||||| |||  | | ||||||||| | |||||| | ||||  |||||||||||||| ||| ||||||||||||||||||| |||||    
T  39765912 taatactttggaagtagtgtgcagagtattaattggagggtacagtgaaaagaaaaagttattattgcatt-gaaaactgaaagtgacattcatttt 39766007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 45358902 - 45359034
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    |||||| ||||||||||||  ||| |||||||||||||       ||||||||| |||||| |||||||| ||||||||||||  ||||||| ||||  |    
T  45358902 attattttaatcaactattagtttgtttttcattaaagaaaaaa-taatactttggaagtagtgtatataatattaattgaaaaatacaattgaaaagaa 45359000  T
Q  110 aaagttattattgtatttgaaaactgaaagtgaca 144  Q
    ||| ||||||||| | ||||||| ||||| |||||    
T  45359001 aaaattattattgca-ttgaaaattgaaaatgaca 45359034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 31899255 - 31899386
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||||||| |||||||||||||       ||||||||| |||||| ||| | ||| |||||||||||  |||||||| ||||      
T  31899255 attatcctaatcaactattgatttgtttttcattaaag-aaaagataatactttggaagtagtgtaacataatattaattgaagagtacaattgaaaaga 31899353  T
Q  109 aaaagttattattgtatttgaaaactgaaagtga 142  Q
    |||| ||||||||| | ||| |||||||||||||    
T  31899354 aaaaattattattgca-ttggaaactgaaagtga 31899386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 40362482 - 40362436
Alignment:
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  40362482 aaaagttattattgcatt-gaaaactgaaagtgacattcattttaaaa 40362436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 44713609 - 44713535
Alignment:
Q  82 tattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||| |||| |||| ||||| |||||||||||||| ||| ||||| ||||||||| ||| |||||||||    
T  44713609 tattaattgaagggtataattgaaaaaaaaaagttattattgcattggaaaa-tgaaagtgatattcattttaaaa 44713535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 19574489 - 19574392
Alignment:
Q  56 taatactttagaagtaatgta-tatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattt 151  Q
    ||||| ||| |||||| |||| |||| ||||||||||| ||||||||| ||||  |||||||||||||  |||   ||||||| ||||||||||||||    
T  19574489 taatattttggaagtagtgtaatatagtattaattgaagggtacaattgaaaagaaaaagttattattacattgcgaaactgagagtgacatttattt 19574392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 19438317 - 19438242
Alignment:
Q  76 atatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattt 151  Q
    ||||| ||||||||||| ||||||||| ||||  |||||||||||||  | ||| ||||||| ||||||||||||||    
T  19438317 atatagtattaattgaagggtacaattgaaaagaaaaagttattattaca-ttggaaactgagagtgacatttattt 19438242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 29411786 - 29411697
Alignment:
Q  67 aagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||| |||||||||| | ||||||||| ||||||||||| |||||||||    
T  29411786 aagtaatgtatataatattaattgaagggtacaattaaaaagaaaaggttattattgca-ttgaaaactaaaagtgacattcattttaaaa 29411697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 18719440 - 18719584
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       |||||||||  || || |||||||| ||||||||||| ||||||||| ||||  |    
T  18719440 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttgaaaatagtgtatatagtattaattgaagggtacaattgaaaagaa 18719538  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||||| | ||||||||||||||||||||| |||| ||||    
T  18719539 aaagttattattgca-ttgaaaactgaaagtgacattcatttcaaaa 18719584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 38926745 - 38926607
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataa-aagtt 115  Q
    ||||||||||||| ||| |||||||||||||       ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| |||| || |||||    
T  38926745 taatcaactattggtttgtttttcattaaagaaaaaa-taatactttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaaaagaagtt 38926647  T
Q  116 attattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||| ||| ||||||||||||||||||| |||||||||    
T  38926646 attattgcatt-gaaaactgaaagtgacattcattttaaaa 38926607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 8540184 - 8540039
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaa-ta 109  Q
    ||||| |||||||||||||  ||| |||||||||||||       ||||| |||||||||| |||| ||| ||||||||||| ||||||||||||||  |    
T  8540184 attatcctaatcaactattagtttgtttttcattaaagaaaaaaataatattttagaagtagtgtaaataatattaattgaagggtacaattaaaaagaa 8540085  T
Q  110 aaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||||| |  || ||||||||| || |||| |||||||||    
T  8540084 aaagttattattgca-ctggaaactgaaaatgtcattcattttaaaa 8540039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 4469591 - 4469502
Alignment:
Q  67 aagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||| ||||||||| |||||||| || ||||||||| |||| |||| |||||||||||||| ||||||||||||||| ||| |||||||||    
T  4469591 aagtgatgtatataatattaatttaagggtacaattgaaaagaaaaagttattattgtatt-gaaaactgaaagtgaaattcattttaaaa 4469502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 29808959 - 29808813
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaata 109  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||||||| |||||| ||||  ||| |||||| |||| ||||| ||| |||| |    
T  29808959 attatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtaacataatattaagtgaagggtacgattgaaaaga 29808860  T
Q  110 aaa-gttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||| ||||| |||| ||| ||||||||||||||||||| |||||||||    
T  29808859 aaaagttatgattgcatt-gaaaactgaaagtgacattcattttaaaa 29808813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 37038777 - 37038936
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa 110  Q
    ||||| |||||||||||||| ||| |||||||||||||       |||||||||  ||||| |||||||| ||||||||||| |||| |||| |||| ||    
T  37038777 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttgaaagtagtgtatataatattaattgaagggtataattgaaaagaa 37038875  T
Q  111 aagttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaa 174  Q
    ||  |  ||||| ||| ||||||||||||||||||| ||||||||| | ||||| ||| |||||    
T  37038876 aaagt--tattgcatt-gaaaactgaaagtgacattcattttaaaacaattttttggggtaaaa 37038936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 11188545 - 11188652
Alignment:
Q  57 aatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataa-aagttattattgtatttgaaaactgaaagtgacatttattttaaa 155  Q
    |||||||| |||||| ||||||||  |||||||||| | ||||||| |||| || |||||||| ||| ||| ||||||||||||||||||| ||||| ||    
T  11188545 aatactttggaagtagtgtatataggattaattgaatgatacaattgaaaaaaataagttattgttgcatt-gaaaactgaaagtgacattcattttgaa 11188643  T
Q  156 atatttttt 164  Q
    ||| |||||    
T  11188644 ataattttt 11188652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 35799303 - 35799208
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||  ||||| |||  ||| ||||||||| | ||||||||| |||| |||||||||||||| | ||| |||||||||||||||||||||||    
T  35799303 taatactttgaaagtagtgtgcataatattaattggagggtacaattgaaaaaaaaagttattattgca-ttggaaactgaaagtgacatttatttt 35799208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 12566034 - 12566128
Alignment:
Q  58 atactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||| |||| | |||||||| ||||||||||| ||||||||| ||||| |||| ||||||||| | ||| ||||||||||||||||| |||||    
T  12566034 atactttggaagcagtgtatataatattaattgaatggtacaattgaaaaaaaaaaattattattgca-ttggaaactgaaagtgacattcatttt 12566128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 16463110 - 16463180
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||| ||||||||| |||| |||| |||||||||| ||| |||||||||||||||||||||||||    
T  16463110 tattaattgaagggtacaattgaaaagaaaaagttattattgcatt-gaaaactgaaagtgacatttatttt 16463180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 18579266 - 18579172
Alignment:
Q  58 atactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||| |||||| |||||||| ||||||||||| ||| ||||| ||||  |||| ||||||||| | ||||||||||||||||||||| |||||    
T  18579266 atactttggaagtagtgtatatagtattaattgaagggtgcaattgaaaagaaaaaattattattgca-ttgaaaactgaaagtgacattcatttt 18579172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 5717613 - 5717506
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaagtt-attattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| |||||| ||| || | ||||||||| | |||||||||||||| |||| || ||||||| ||| |||| |||||||||||||| |||||||    
T  5717613 taatactttggaagtagtgtgtagagtattaattgga-ggtacaattaaaaagaaaaatttattattgcattggaaa-ctgaaagtgacattcattttaa 5717516  T
Q  155 aatatttttt 164  Q
    || |||||||    
T  5717515 aacatttttt 5717506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 12342239 - 12342098
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgt-atatattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||||||| |||||||||||||       ||||| ||| |||||| ||| | ||| ||||||||||| ||||||||| ||||      
T  12342239 attatcctaatcaactattgatttgtttttcattaaag-aaaaaataatattttggaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 12342141  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||| | ||| |||| |||||||||||| |||||    
T  12342140 aaaagttattattgca-ttggaaaccgaaagtgacattcatttt 12342098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 14286013 - 14285921
Alignment:
Q  82 tattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaa 174  Q
    ||||||||| | ||||||||| ||||| |||||||||||||||| ||| ||||||||| ||||||| ||||| ||||| |||||  ||||||||    
T  14286013 tattaattggagggtacaattgaaaaaaaaaagttattattgta-ttggaaactgaaaatgacattcattttgaaataatttttttggctaaaa 14285921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 28072620 - 28072568
Alignment:
Q  103 aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  28072620 aaaaaaaaaagttattattgtatt-gaaaactgaaagtgacattcattttaaaa 28072568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 45301866 - 45301766
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    |||||||||| ||||| |||| | | ||||||||||  ||||||||| |||| |||| |||||||||| ||| |||| |||||||||||||| |||||||    
T  45301866 taatactttaaaagtagtgtacacagtattaattgatgggtacaattgaaaagaaaaagttattattgcattggaaa-ctgaaagtgacattcattttaa 45301768  T
Q  155 aa 156  Q
    ||    
T  45301767 aa 45301766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 12393999 - 12394069
Alignment:
Q  82 tattaattgaaaggtacaattaaaaat-aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||||| ||||||||||||||| |||||||||||||| ||| | ||||||||||| ||||| |||||    
T  12393999 tattaattgaagggtacaattaaaaataaaaagttattattgcattag-aaactgaaagtaacattcatttt 12394069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 6220411 - 6220556
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||| ||| ||||||||||||        ||||| ||| |||||| ||||  ||| |||||||||||||||||| || ||||      
T  6220411 attatcctaatcaactattggtttgtttttcattaaa-aagaaaataataatttggaagtagtgtaacataatattaattgaaaggtacagttgaaaaga 6220509  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    |||||||||||||| | ||| ||||| ||||||||||| |||||||||    
T  6220510 aaaagttattattgca-ttggaaactaaaagtgacattcattttaaaa 6220556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 13562068 - 13561999
Alignment:
Q  83 attaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||| ||||||||| |||| |||| |||||||||| ||| |||| ||||||||||||||||||||    
T  13562068 attaattgaagggtacaattgaaaagaaaaagttattattgcattagaaa-ctgaaagtgacatttatttt 13561999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 36685803 - 36685892
Alignment:
Q  67 aagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||| ||| |||| ||||||||||| ||||||||| ||||  |||| ||||||||||||||| ||| ||||||| ||||| |||||||||    
T  36685803 aagtagtgtttatagtattaattgaagggtacaattgaaaagaaaaaattattattgtatttg-aaattgaaagtaacattcattttaaaa 36685892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 441238 - 441379
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| ||||||||| |||| ||| |||||||||||||       ||||||||| |||||  ||||  ||| ||||||||||| ||||||||| ||||      
T  441238 attatcctaatcaaccattggtttgtttttcattaaagaaaaaa-taatactttggaagtggtgtaacatagtattaattgaagggtacaattgaaaaga 441336  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||| | |||||||| |||||||||||| |||||    
T  441337 aaaagttattattgca-ttgaaaacagaaagtgacattcatttt 441379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 7644721 - 7644649
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||||| ||||||||| |||| |||| ||||||||| |||| ||| ||||||||||||||| |||||||    
T  7644721 tattaattgaagggtacaattgaaaagaaaaagttattattatatt-gaatactgaaagtgacattcattttaa 7644649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 11132696 - 11132575
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaat-- 108  Q
    |||||| ||||||||||||  ||| |||||||||||||       ||||| |||  |||||||||||||| |||||||| || | ||||||| |||||      
T  11132696 attattataatcaactatttgtttgtttttcattaaagaaaaaa-taatattttgaaagtaatgtatatagtattaattaaaggatacaattgaaaataa 11132598  T
Q  109 aaaagttattattgtatttgaaa 131  Q
    |||||||||||||| ||||||||    
T  11132597 aaaagttattattgaatttgaaa 11132575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 27964425 - 27964517
Alignment:
Q  59 tactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattt 151  Q
    |||||| |||||| ||| |||| ||||||||||| ||||||||| ||||  |||||||||||||| | ||| ||||| ||||||||||| ||||    
T  27964425 tactttggaagtagtgtgtatagtattaattgaagggtacaattgaaaagaaaaagttattattgca-ttggaaactaaaagtgacattcattt 27964517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 19469664 - 19469579
Alignment:
Q  18 taatcaactattgatttatttttcattaaagnnnnnnn-taatactttagaagtaatgtatatattattaattgaaaggtacaatt 102  Q
    ||||||| ||||||||| |||||||||||||        ||||||||| ||| ||||||||||| ||||||||||| |||||||||    
T  19469664 taatcaattattgatttgtttttcattaaagaaaaaaaataatactttggaactaatgtatataatattaattgaatggtacaatt 19469579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 34035869 - 34035917
Alignment:
Q  126 ttgaaaactgaaagtgacatttattttaaaatattttttggggctaaaa 174  Q
    ||||||||||||||||||||| ||||||||||| |||||  ||||||||    
T  34035869 ttgaaaactgaaagtgacattcattttaaaataatttttttggctaaaa 34035917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 152
Target Start/End: Complemental strand, 36178052 - 36177981
Alignment:
Q  81 ttattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||| ||||||||| ||||| |||||||||||||| | ||| |||| |||||||||||| |||||    
T  36178052 ttattaattgaagggtacaattgaaaaaaaaaagttattattgca-ttggaaacggaaagtgacattcatttt 36177981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 4051755 - 4051852
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt--aaaaataaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||  ||||| |||| ||| ||||||||| |||||||||||  ||| | |||| ||||||||| | ||| ||||||||||||||||| |||||    
T  4051755 taatactttgaaagtagtgtacatagtattaattggaaggtacaattgaaaagaaaaaaattattattgca-ttggaaactgaaagtgacattcatttt 4051852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 4658245 - 4658341
Alignment:
Q  17 ctaatcaactattgatttatttttcattaaagnnnnnnnt-aatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa 112  Q
    |||||||||||||| ||| |||||||||||||       | ||||||||  ||||| |||||||| ||||||||||| ||||||||| |||| ||||    
T  4658245 ctaatcaactattggtttgtttttcattaaagaaaaaaattaatactttgaaagtagtgtatatagtattaattgaagggtacaattgaaaagaaaa 4658341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 19164458 - 19164391
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaa-taaaagttattattg 122  Q
    |||||||||  ||||| |||||||| ||||||||||| | ||||||||||||  ||||||||||||||    
T  19164458 taatactttgaaagtagtgtatataatattaattgaaggatacaattaaaaagaaaaagttattattg 19164391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 35046593 - 35046519
Alignment:
Q  82 tattaattgaaaggtacaattaaaaa-taaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||| |||| ||||||||| ||||||||||||||| | ||| ||| ||||||||||||| || ||||||    
T  35046593 tattaattgaagggtataattaaaaattaaaagttattattgca-ttggaaattgaaagtgacattcatcttaaaa 35046519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 42004993 - 42004884
Alignment:
Q  56 taatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaat-aaaagttattattgtatttgaaaactgaaagtgacatttatttta 153  Q
    ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| ||||| |||| ||||||||| | ||| ||| | ||| ||||||| ||||||    
T  42004993 taatactttggaagtagtgtaacataatattaattgaagggtacaattgaaaataaaaaattattattgca-ttggaaattaaaaatgacattcatttta 42004895  T
Q  154 aaatatttttt 164  Q
    ||||| |||||    
T  42004894 aaataattttt 42004884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 42753887 - 42753750
Alignment:
Q  17 ctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaattaaaaataaaa--g 113  Q
    |||||||||||||||||| |||||| |||||        || |||||| |||||| ||||  |||  ||||||||||   |||||||||||||||||  |    
T  42753887 ctaatcaactattgatttgtttttctttaaaaaaaataatagtactttggaagtagtgtaacatagcattaattgaagaatacaattaaaaataaaaaag 42753788  T
Q  114 ttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||| | ||| |||||||||||||||||||| ||||    
T  42753787 ttattatcgcatt-gaaaactgaaagtgacatttttttt 42753750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 8774198 - 8774161
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  8774198 attatcctaatcaactattggtttatttttcattaaag 8774161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 8789437 - 8789474
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  8789437 attatcctaatcaactattggtttatttttcattaaag 8789474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 19636654 - 19636617
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  19636654 attatcctaatcaactattggtttatttttcattaaag 19636617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 19835247 - 19835210
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  19835247 attatcctaatcaactattggtttatttttcattaaag 19835210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 27986088 - 27986037
Alignment:
Q  103 aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  27986088 aaaaaaaaaagtt-ttattgtatt-gaaaactgaaagtgacattcattttaaaa 27986037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 33482281 - 33482381
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaa 154  Q
    ||||||||| ||| |||||||||||||||||||||||  ||||| || ||||  ||||  |||||||  | ||||||| | ||||||||||| |||||||    
T  33482281 taatactttcgaaataatgtatatattattaattgaagagtacagttgaaaagaaaaaaatattattaca-ttgaaaaataaaagtgacattcattttaa 33482379  T
Q  155 aa 156  Q
    ||    
T  33482380 aa 33482381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 34546155 - 34546192
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaag 48  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  34546155 attatcctaatcaactattgatttgtttttcattaaag 34546192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 3511 - 3652
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaat 108  Q
    ||||| |||||||||||||| ||| |||||||||||||       |||||||||||||||| ||||  ||| ||||||||||| ||||||||| ||||      
T  3511 attatcctaatcaactattggtttgtttttcattaaagaaaaaa-taatactttagaagtagtgtaacatagtattaattgaagggtacaattgaaaaga 3609  T
Q  109 aaaagttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||    
T  3610 aaaagttattattgta-ttggaaactgaaagtgacattcatttt 3652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 4241 - 4133
Alignment:
Q  57 aatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactg-aaagtgacatttattttaa 154  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||||| ||||  |||| ||||||||| | ||||||| || ||| ||||||| |||||||    
T  4241 aatactttagaagtagtgtatataatattaattgaagggtacaattgaaaagaaaaaattattattgca-ttgaaaattgaaaaatgacattcattttaa 4143  T
Q  155 aatatttttt 164  Q
    ||||| ||||    
T  4142 aatatatttt 4133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 24753 - 24888
Alignment:
Q  17 ctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtat-atattattaattgaaaggtacaatt-aaaaataaaagt 114  Q
    |||||||||||||| ||| |||||||||||||       ||||||||| |||||| ||||  ||| ||||||||||| ||||||||| ||||  ||||||    
T  24753 ctaatcaactattggtttgtttttcattaaagaaaaga-taatactttggaagtattgtaacatagtattaattgaagggtacaattgaaaagaaaaagt 24851  T
Q  115 tattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    |||||||| | ||| ||||||||||||||||| |||||    
T  24852 tattattgca-ttggaaactgaaagtgacattcatttt 24888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 4704 - 4558
Alignment:
Q  17 ctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaatt-aaaaataaaagtt 115  Q
    |||||||||||||||||| ||||| |||||||       ||||| ||| |||||| |||||||| |||| |||||||||||||||| ||||  |||| ||    
T  4704 ctaatcaactattgatttgttttttattaaagtaaata-taatattttggaagtagtgtatataatattgattgaaaggtacaattgaaaagaaaaaatt 4606  T
Q  116 attattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||||||| | || |||| | ||||||||||| ||||| ||||| |||||    
T  4605 attattgca-ttaaaaattaaaagtgacattcattttgaaataattttt 4558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 10006 - 10107
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaag--ttattattgtatttgaaaactgaaagtgacatttatttta 153  Q
    ||||| ||| |||||| |||||||| || |||||||| ||||||||| |||| ||||   ||||||| ||||| ||||| ||||||||||||| ||||||    
T  10006 taatatttttgaagtattgtatatagtactaattgaagggtacaattgaaaagaaaaaaattattatagtatt-gaaaattgaaagtgacattcatttta 10104  T
Q  154 aaa 156  Q
    |||    
T  10105 aaa 10107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 9719 - 9793
Alignment:
Q  82 tattaattgaaaggtacaatt-aaaaataaaagttattattgtatttgaaaactgaaagtgacatttattttaaaa 156  Q
    ||||||||||| ||||||||| ||||  |||||||||||||| | ||| ||||||||| ||||||| |||||||||    
T  9719 tattaattgaagggtacaattgaaaagaaaaagttattattgca-ttggaaactgaaaatgacattcattttaaaa 9793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 21159 - 21241
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaag-ttattattgtatttgaaaactgaaagtgacatttattttaaaatatttttt 164  Q
    ||||||||||| ||||||||| |||| ||||  ||||||||| |||||||| |||||||||||| | ||||||||||| |||||    
T  21159 tattaattgaagggtacaattgaaaagaaaaaattattattgcatttgaaa-ctgaaagtgacagtcattttaaaataattttt 21241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 3862 - 3958
Alignment:
Q  56 taatactttagaagtaatgtatatattattaattgaaaggtacaattaaaaataaaa-gttattattgtatttgaaaactgaaagtgacatttatttt 152  Q
    ||||||||| |||||| |||  | | ||||||||| | ||||||||| |||| |||| |||||||||| ||| ||||||||||||||||||| |||||    
T  3862 taatactttggaagtagtgtgcagagtattaattggagggtacaattgaaaagaaaaagttattattgcatt-gaaaactgaaagtgacattcatttt 3958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 591 - 667
Alignment:
Q  82 tattaattgaaaggtacaattaaaaataaaag-ttattattgtatttgaaaactgaaagtgacatttattttaaaata 158  Q
    ||||||||||| |||||||||  ||| ||||  ||||||||| ||| |||| |||||||||||||| |||||||||||    
T  591 tattaattgaagggtacaattgtaaagaaaaaattattattgcattggaaa-ctgaaagtgacattcattttaaaata 667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 9690 - 9600
Alignment:
Q  11 attattctaatcaactattgatttatttttcattaaagnnnnnnntaatactttagaagtaatgtatatattattaattgaaaggtacaat 101  Q
    ||||| |||||||||||||| ||| |||||||||||||       ||||| |||  ||||| | |||||| ||||||||||| ||||||||    
T  9690 attatcctaatcaactattggtttgtttttcattaaagaaaaaaataataatttgaaagtagtatatatagtattaattgaagggtacaat 9600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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