View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19658_high_66 (Length: 306)
Name: NF19658_high_66
Description: NF19658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19658_high_66 |
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Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 27 - 294
Target Start/End: Original strand, 10322500 - 10322755
Alignment:
| Q |
27 |
attaaagctagcttctttttcttcttgctttctcttttattgagctgataccatttaggagcatgttttattataaagaaatgttattagttctcataaa |
126 |
Q |
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| T |
10322500 |
attaaagctagcttctttttcttcttgctttctcttttattgagctgataccatttaggagcatgttttattataaagaaatgttagtagttctcataa- |
10322598 |
T |
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| Q |
127 |
cggaagcttttacggttatgttattttttgagtaaaaaattgaccacatatctatctatgccctttannnnnnnactaaagacattcattcttttactgt |
226 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| |
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| T |
10322599 |
-----------acggttatgttattttttgagtaaaaaattgaccacatatctatctatgccttttttttttttactaaagacatccattcttttactgt |
10322687 |
T |
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| Q |
227 |
caaaaatgggtagaaaaagaataatgcaccgactttttgttttgacaaaaattacaccgaccaagaat |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10322688 |
caaaaatgggtagaaaaagaataatgcaccgactttttgttttgacaaaaattacaccgaccaagaat |
10322755 |
T |
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