View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19658_high_81 (Length: 271)
Name: NF19658_high_81
Description: NF19658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19658_high_81 |
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Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 7802722 - 7802964
Alignment:
| Q |
11 |
attattctcatgttgtattgttgtatccaactccccatgtgaggctttcttgtttaatacacacaaccataagaatgacaaaagcttcttccgtagaatc |
110 |
Q |
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| T |
7802722 |
attattctcatgttgtattgttgtatccaactccccatgtgaggctttcttgtttaatacacacaaccataagaatgacaaaagcttcttccgtagaatc |
7802821 |
T |
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| Q |
111 |
cggcattggaacatgacttatgacttatgtatgtactagaactagaaagagctttttcttttaatctttttgactcaaactataactagaaagagcatca |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7802822 |
cggcattggaacatgacttatgacttatgtatgtactagaactagaaagagctttttcttttaatctttttgactcaaactataactagaaagagcatca |
7802921 |
T |
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| Q |
211 |
accactaatttccccttcattattcttcatgtgctagctattt |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7802922 |
accactaatttccccttcattattcttcatgtgctagctattt |
7802964 |
T |
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