View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19658_high_83 (Length: 265)
Name: NF19658_high_83
Description: NF19658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19658_high_83 |
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Alignment Details
Target: chr1 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 51320609 - 51320365
Alignment:
| Q |
11 |
aagaaacactattcattaggtacaaataacttaacgggccatcatttagattcattgctctctctct--------------gataccaccagagtttaat |
96 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
51320609 |
aagaaacactattcattaggtacaaataacttaacgggccatcatttagattcattgctctctctctctctctctctctctgataccaccagagtttaat |
51320510 |
T |
|
| Q |
97 |
tatgtcaaatcccaattcaattactattccctcatcagctcctgaggacggtacgtttgtttaacaacatcccaacctatgtatgtatgtatttctatat |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | |
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| T |
51320509 |
tatgtcaaatcccaattcaattactattccctcatcagctcctgaggacggtacgtttgtttaacaacatcccaacctatgtat----gta----tatct |
51320418 |
T |
|
| Q |
197 |
atatatttcacaggaaccttgatgtctatttttgtagtgcgacctcatcatct |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51320417 |
atatatttcacaggaaccttgatgtctatttttgtagtgcgacctcatcatct |
51320365 |
T |
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