View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19658_low_111 (Length: 214)
Name: NF19658_low_111
Description: NF19658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19658_low_111 |
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Alignment Details
Target: chr3 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 78 - 196
Target Start/End: Original strand, 45458628 - 45458746
Alignment:
| Q |
78 |
gtcaagtaactaatggttgacctgacacgccttgagagggaagaagtgtggatttcgatgtttgaacaccgacccttgcatgttattgttcttgcaacta |
177 |
Q |
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| T |
45458628 |
gtcaagtagctaatggttgacctgacacgccttgagaggggagaagtgtggatttcgatgtttgaacaccgacccttgcatgtcattgttcttgcaacta |
45458727 |
T |
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| Q |
178 |
acaattgaattgtaattac |
196 |
Q |
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|||||||| ||| |||||| |
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| T |
45458728 |
acaattgagttgaaattac |
45458746 |
T |
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