View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19658_low_20 (Length: 522)

Name: NF19658_low_20
Description: NF19658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19658_low_20
NF19658_low_20
[»] chr6 (20 HSPs)
chr6 (261-505)||(11019770-11020018)
chr6 (338-497)||(11051010-11051168)
chr6 (12-63)||(19284365-19284416)
chr6 (15-58)||(25119105-25119148)
chr6 (12-58)||(21384988-21385034)
chr6 (14-62)||(10698572-10698620)
chr6 (14-58)||(21384788-21384832)
chr6 (15-58)||(10588955-10588998)
chr6 (15-62)||(19281278-19281325)
chr6 (15-58)||(22857487-22857530)
chr6 (15-62)||(25066204-25066251)
chr6 (14-56)||(6900934-6900976)
chr6 (14-56)||(15493305-15493347)
chr6 (14-56)||(34869956-34869998)
chr6 (15-56)||(7765406-7765447)
chr6 (25-62)||(14237773-14237810)
chr6 (14-55)||(15034992-15035033)
chr6 (14-63)||(22857678-22857727)
chr6 (14-58)||(878391-878435)
chr6 (14-58)||(25119471-25119515)
[»] chr4 (49 HSPs)
chr4 (14-64)||(37059704-37059754)
chr4 (14-58)||(2124546-2124590)
chr4 (14-58)||(12722939-12722983)
chr4 (14-58)||(30779342-30779386)
chr4 (14-62)||(53865244-53865292)
chr4 (15-62)||(2124339-2124386)
chr4 (14-61)||(33819687-33819734)
chr4 (12-58)||(1492671-1492717)
chr4 (12-62)||(36309616-36309666)
chr4 (26-59)||(4169441-4169474)
chr4 (14-58)||(8165761-8165805)
chr4 (14-58)||(17109718-17109762)
chr4 (14-58)||(17109919-17109963)
chr4 (14-58)||(21995669-21995713)
chr4 (14-58)||(22180205-22180249)
chr4 (14-62)||(25715638-25715686)
chr4 (14-58)||(36924240-36924284)
chr4 (14-58)||(45256896-45256940)
chr4 (15-58)||(6841820-6841863)
chr4 (12-55)||(8157288-8157331)
chr4 (15-58)||(10473650-10473693)
chr4 (15-58)||(26577260-26577303)
chr4 (15-58)||(31763110-31763153)
chr4 (15-58)||(53526454-53526497)
chr4 (26-60)||(8157108-8157142)
chr4 (14-56)||(11786105-11786147)
chr4 (14-56)||(11798272-11798314)
chr4 (14-56)||(13635618-13635660)
chr4 (14-56)||(15051029-15051071)
chr4 (14-56)||(30358838-30358880)
chr4 (14-56)||(30597830-30597872)
chr4 (14-56)||(49425950-49425992)
chr4 (14-56)||(50644671-50644713)
chr4 (11-53)||(51076901-51076943)
chr4 (14-56)||(54895584-54895626)
chr4 (25-58)||(12722736-12722769)
chr4 (14-63)||(21098133-21098182)
chr4 (25-58)||(33883293-33883326)
chr4 (27-56)||(47219293-47219322)
chr4 (14-55)||(49492406-49492447)
chr4 (14-63)||(54895398-54895447)
chr4 (14-54)||(638995-639035)
chr4 (15-63)||(9813147-9813195)
chr4 (14-58)||(25715728-25715772)
chr4 (27-59)||(31762927-31762959)
chr4 (14-54)||(36309419-36309459)
chr4 (14-58)||(43374446-43374490)
chr4 (14-58)||(47567895-47567939)
chr4 (14-58)||(51836326-51836370)
[»] chr3 (35 HSPs)
chr3 (14-68)||(19384370-19384424)
chr3 (14-62)||(12974007-12974055)
chr3 (14-58)||(19012563-19012607)
chr3 (24-58)||(16653496-16653530)
chr3 (24-58)||(19012391-19012425)
chr3 (14-64)||(36185719-36185769)
chr3 (25-62)||(49053220-49053257)
chr3 (14-58)||(8036799-8036843)
chr3 (14-58)||(8719138-8719182)
chr3 (14-58)||(9071025-9071069)
chr3 (15-55)||(27446215-27446255)
chr3 (14-58)||(36185906-36185950)
chr3 (14-58)||(50416479-50416523)
chr3 (14-58)||(50416565-50416609)
chr3 (13-56)||(10986482-10986525)
chr3 (13-56)||(34562400-34562443)
chr3 (13-56)||(41191410-41191453)
chr3 (14-56)||(3475300-3475342)
chr3 (14-56)||(6097577-6097619)
chr3 (25-55)||(7045328-7045358)
chr3 (14-56)||(9106398-9106440)
chr3 (14-56)||(9595873-9595915)
chr3 (24-58)||(12974201-12974235)
chr3 (14-56)||(19284802-19284844)
chr3 (14-56)||(30947804-30947846)
chr3 (14-56)||(54379293-54379335)
chr3 (25-58)||(27068531-27068564)
chr3 (14-55)||(47924367-47924408)
chr3 (25-58)||(49450493-49450526)
chr3 (14-55)||(50755193-50755234)
chr3 (25-58)||(51361522-51361555)
chr3 (14-54)||(2941821-2941861)
chr3 (14-58)||(8036990-8037034)
chr3 (14-58)||(16276668-16276712)
chr3 (14-62)||(47225849-47225897)
[»] chr7 (30 HSPs)
chr7 (14-63)||(38837730-38837779)
chr7 (15-58)||(34227878-34227921)
chr7 (13-58)||(11732041-11732086)
chr7 (25-58)||(26945513-26945546)
chr7 (14-63)||(26945715-26945764)
chr7 (14-63)||(34227670-34227719)
chr7 (14-58)||(5728881-5728925)
chr7 (14-58)||(15973859-15973903)
chr7 (14-58)||(31365270-31365314)
chr7 (14-58)||(44426597-44426641)
chr7 (14-62)||(44426800-44426848)
chr7 (14-62)||(45478515-45478563)
chr7 (15-63)||(46004537-46004585)
chr7 (14-58)||(46572573-46572617)
chr7 (13-56)||(16933136-16933179)
chr7 (13-56)||(16938519-16938562)
chr7 (13-56)||(31660199-31660242)
chr7 (14-57)||(48692051-48692094)
chr7 (14-56)||(30884115-30884157)
chr7 (13-63)||(32685838-32685888)
chr7 (14-56)||(33798734-33798776)
chr7 (14-56)||(35737079-35737121)
chr7 (14-56)||(41911005-41911047)
chr7 (14-56)||(46358651-46358693)
chr7 (14-56)||(47340278-47340320)
chr7 (29-62)||(6620813-6620846)
chr7 (15-56)||(48830601-48830642)
chr7 (14-58)||(5728624-5728668)
chr7 (15-63)||(41065971-41066019)
chr7 (14-58)||(43742248-43742292)
[»] chr1 (33 HSPs)
chr1 (14-67)||(42134134-42134187)
chr1 (14-58)||(32595103-32595147)
chr1 (15-58)||(12070612-12070655)
chr1 (14-60)||(9628600-9628646)
chr1 (12-62)||(32595282-32595332)
chr1 (14-58)||(12796422-12796466)
chr1 (25-61)||(17811295-17811331)
chr1 (14-62)||(17893067-17893115)
chr1 (15-63)||(17893275-17893323)
chr1 (14-62)||(18928956-18929004)
chr1 (14-58)||(23174401-23174445)
chr1 (26-62)||(29945429-29945465)
chr1 (14-58)||(33156991-33157035)
chr1 (14-62)||(45849103-45849151)
chr1 (14-54)||(45849310-45849350)
chr1 (15-58)||(1395353-1395396)
chr1 (15-58)||(10974632-10974675)
chr1 (15-58)||(14229171-14229214)
chr1 (14-56)||(16976086-16976128)
chr1 (14-64)||(18057810-18057860)
chr1 (14-56)||(23817441-23817483)
chr1 (25-63)||(24368624-24368662)
chr1 (14-56)||(24636057-24636099)
chr1 (12-58)||(32143768-32143814)
chr1 (12-58)||(42133943-42133989)
chr1 (14-56)||(43452673-43452715)
chr1 (14-56)||(48762224-48762266)
chr1 (14-56)||(49936830-49936872)
chr1 (25-58)||(9041063-9041096)
chr1 (25-58)||(31763985-31764018)
chr1 (14-58)||(14229362-14229406)
chr1 (14-58)||(23920970-23921014)
chr1 (26-58)||(49992517-49992549)
[»] chr5 (25 HSPs)
chr5 (14-58)||(22695541-22695585)
chr5 (14-62)||(35662234-35662282)
chr5 (12-58)||(36864066-36864112)
chr5 (25-58)||(5411768-5411801)
chr5 (15-63)||(15559043-15559091)
chr5 (14-58)||(39861781-39861825)
chr5 (15-58)||(3340589-3340632)
chr5 (14-57)||(11660983-11661026)
chr5 (14-56)||(3883928-3883970)
chr5 (14-56)||(14394599-14394641)
chr5 (14-56)||(14940249-14940291)
chr5 (14-56)||(26637730-26637772)
chr5 (14-56)||(37456811-37456853)
chr5 (14-56)||(39166152-39166194)
chr5 (25-58)||(11660792-11660825)
chr5 (15-56)||(23155526-23155567)
chr5 (14-55)||(23155844-23155885)
chr5 (25-58)||(25545584-25545617)
chr5 (25-58)||(35662066-35662099)
chr5 (26-63)||(36864281-36864318)
chr5 (14-58)||(13363795-13363839)
chr5 (14-58)||(20134198-20134242)
chr5 (26-58)||(20134412-20134444)
chr5 (14-58)||(20696328-20696372)
chr5 (26-62)||(22830801-22830837)
[»] chr2 (27 HSPs)
chr2 (14-58)||(34726797-34726841)
chr2 (13-56)||(15016459-15016502)
chr2 (11-58)||(20661395-20661442)
chr2 (12-58)||(20194026-20194072)
chr2 (14-63)||(42364694-42364743)
chr2 (15-63)||(12449245-12449293)
chr2 (14-62)||(16111706-16111754)
chr2 (15-63)||(24183599-24183647)
chr2 (14-58)||(31783792-31783836)
chr2 (14-58)||(44915492-44915536)
chr2 (12-63)||(23182224-23182275)
chr2 (12-63)||(23593481-23593532)
chr2 (15-62)||(37867357-37867404)
chr2 (14-56)||(7487147-7487189)
chr2 (14-56)||(34726605-34726647)
chr2 (14-56)||(39355166-39355208)
chr2 (15-56)||(1292072-1292113)
chr2 (26-55)||(14551347-14551376)
chr2 (25-58)||(31783997-31784030)
chr2 (15-56)||(41345088-41345129)
chr2 (26-58)||(12449053-12449085)
chr2 (14-58)||(18297167-18297211)
chr2 (15-55)||(19246664-19246704)
chr2 (14-58)||(22596303-22596347)
chr2 (14-58)||(22596505-22596549)
chr2 (14-62)||(30777290-30777338)
chr2 (14-58)||(31711509-31711553)
[»] chr8 (21 HSPs)
chr8 (14-57)||(23567644-23567687)
chr8 (14-58)||(4835517-4835561)
chr8 (14-58)||(17792893-17792937)
chr8 (13-61)||(18757328-18757376)
chr8 (14-58)||(35448611-35448655)
chr8 (15-58)||(34343453-34343496)
chr8 (13-56)||(35301630-35301673)
chr8 (14-57)||(39657708-39657751)
chr8 (14-56)||(23397444-23397486)
chr8 (14-56)||(34633214-34633256)
chr8 (25-63)||(39023011-39023049)
chr8 (15-56)||(1149916-1149957)
chr8 (14-55)||(1672932-1672973)
chr8 (25-58)||(15809852-15809885)
chr8 (26-63)||(17656612-17656649)
chr8 (14-55)||(27506708-27506749)
chr8 (14-54)||(1209787-1209827)
chr8 (14-58)||(15259854-15259898)
chr8 (14-58)||(15808884-15808928)
chr8 (26-58)||(23567485-23567517)
chr8 (25-57)||(24473256-24473288)
[»] scaffold0102 (3 HSPs)
scaffold0102 (12-58)||(33615-33661)
scaffold0102 (24-58)||(33827-33861)
scaffold0102 (26-58)||(15914-15946)
[»] scaffold0516 (1 HSPs)
scaffold0516 (14-58)||(1249-1293)
[»] scaffold0249 (2 HSPs)
scaffold0249 (14-58)||(23543-23587)
scaffold0249 (14-64)||(23736-23786)
[»] scaffold0129 (1 HSPs)
scaffold0129 (15-58)||(20122-20165)
[»] scaffold0074 (2 HSPs)
scaffold0074 (25-56)||(44783-44814)
scaffold0074 (14-56)||(24405-24447)
[»] scaffold0571 (1 HSPs)
scaffold0571 (14-56)||(546-588)
[»] scaffold0338 (1 HSPs)
scaffold0338 (14-55)||(6514-6555)
[»] scaffold0194 (1 HSPs)
scaffold0194 (14-58)||(28676-28720)
[»] scaffold0009 (1 HSPs)
scaffold0009 (14-54)||(51908-51948)


Alignment Details
Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 261 - 505
Target Start/End: Original strand, 11019770 - 11020018
Alignment:
Q  261 atttaccgaccaaaatttcggttgctaaagaagaagattataaaa----caatannnnnnnagacaagtagcatttataaaacaactagcatttgtaaaa 356  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |    |||||       |||||||||||||||||||||||||||||||||||||||    
T  11019770 atttatcgaccaaaatttcggttgctaaagaagaagattataatagtatcaatatttttttagacaagtagcatttataaaacaactagcatttgtaaaa 11019869  T
Q  357 caaataggatctttcataatgaaaccaaaatatgagatatcttctaagggcttatcgaaacaatctaccaccaatccagttcaatttattttctttaact 456  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11019870 caaataggatctttcataatgaaaccaaaatatgagatatcttctaagggcttatcgaaactatctaccaccaatccagttcaatttattttctttaact 11019969  T
Q  457 ttattttgcattttcctagttgcttacgccaaggaaagagataatagat 505  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11019970 ttattttgcattttcctagttgcttacgccaagggaagagataatagat 11020018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 338 - 497
Target Start/End: Original strand, 11051010 - 11051168
Alignment:
Q  338 acaactagcatttgtaaaacaaataggatctttcataatgaaaccaaaatatgagatatcttctaagggcttatcgaaacaatctaccaccaatccagtt 437  Q
    |||||||  |||| |||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11051010 acaactaatatttataaaacaaataggatcatttataataaaaccaaaatatgagatatcttctaagggcttatcgaaactatctaccaccaatccagtt 11051109  T
Q  438 caatttattttctttaactttattttgcattttcctagttgcttacgccaaggaaagaga 497  Q
    ||||||||||||||||||||||||||| |||||   ||||||||||||| ||||||||||    
T  11051110 caatttattttctttaactttattttgtatttttagagttgcttacgcc-aggaaagaga 11051168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 19284416 - 19284365
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||||| ||||    
T  19284416 tagatttatgcagggtgcataaggatttccttatgcaccataaccgcaccct 19284365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 25119148 - 25119105
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||    
T  25119148 atttatgcagggtgcataagaatttccttatgcaccataaccgc 25119105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 21384988 - 21385034
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||||    
T  21384988 tagatttatgcagggtgcataaggatttccttatgcaccataaccgc 21385034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 10698620 - 10698572
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| |||||| ||| |||||||||||||||||||||||||||    
T  10698620 gatttatgcagggtgcacaaggatttccttatgcaccataaccgcgccc 10698572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 21384832 - 21384788
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| | ||||||||||||||||||||||||||||||||    
T  21384832 gatttatgcaggatgcataagaatttccttatgcaccataaccgc 21384788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 10588955 - 10588998
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||    
T  10588955 atttatgcagggtgcataaggatttccttatgcaccataaccgc 10588998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 19281325 - 19281278
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    ||||| ||| |||||| ||| |||||||||||||||||||||||||||    
T  19281325 atttatgcagggtgcacaaggatttccttatgcaccataaccgcgccc 19281278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 22857530 - 22857487
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||    
T  22857530 atttatgcagggtgcataaggatttccttatgcaccataaccgc 22857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 25066251 - 25066204
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    ||||| ||| |||||||||||||||||||||  |||||||||||||||    
T  25066251 atttatgcagggtgcataagaatttccttatataccataaccgcgccc 25066204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 6900934 - 6900976
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  6900934 gatttatgcacggtgcataaggatttccttatgcaccataacc 6900976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 15493305 - 15493347
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  15493305 gatttatgcacggtgcataaggatttccttatgcaccataacc 15493347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 34869998 - 34869956
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  34869998 gatttatgcacggtgcataaggatttccttatgcaccataacc 34869956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 7765406 - 7765447
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||| ||| |||||||||| |||||||||||||||||||||    
T  7765406 atttatgcacggtgcataaggatttccttatgcaccataacc 7765447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 14237810 - 14237773
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  14237810 ggtgcataaggatttccttatgcaccataacctcgccc 14237773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 15034992 - 15035033
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataac 55  Q
    |||||| ||| |||||||||| ||||||||||||||||||||    
T  15034992 gatttatgcacggtgcataaggatttccttatgcaccataac 15035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 22857678 - 22857727
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||||| ||| |||||||||| |||| |||||||||||||||||| ||||    
T  22857678 gatttatgcagggtgcataaggattttcttatgcaccataaccgcaccct 22857727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 878391 - 878435
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| ||| |||||| |||||||||||||||||||||||    
T  878391 gatttatgcacggtacataaggatttccttatgcaccataaccgc 878435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 25119471 - 25119515
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| | |||||||| |||||||||||||||||||||||    
T  25119471 gatttatgcaggctgcataaggatttccttatgcaccataaccgc 25119515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 37059754 - 37059704
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgcccta 64  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  37059754 gatttatgcaaggtgcataaggatttccttatgcaccataaccgcgcccta 37059704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 2124546 - 2124590
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||    
T  2124546 gatttatgcagggtgcataagaatttccttatgcaccataaccgc 2124590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 12722939 - 12722983
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||    
T  12722939 gatttatgcagggtgcataagaatttccttatgcaccataaccgc 12722983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 30779386 - 30779342
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  30779386 gatttatgcaaggtgcataaggatttccttatgcaccataaccgc 30779342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 53865244 - 53865292
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  53865244 gatttatgcagggtgcataaggatttccttatgcaccataaccgcgccc 53865292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 2124386 - 2124339
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  2124386 atttatgcagggtgcataaggatttccttatgcaccataaccgcgccc 2124339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 33819734 - 33819687
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgcc 61  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||||||    
T  33819734 gatttatgcagggtgcataaggatttccttatgcaccataaccgcgcc 33819687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 1492717 - 1492671
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||||    
T  1492717 tagatttatgcagggtgcataaggatttccttatgcaccataaccgc 1492671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 36309616 - 36309666
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||||| ||| |||||||||| |||| ||||||||||||||||||||||    
T  36309616 tagatttatgcagggtgcataaggattttcttatgcaccataaccgcgccc 36309666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 4169441 - 4169474
Alignment:
Q  26 gtgcataagaatttccttatgcaccataaccgcg 59  Q
    ||||||||||||||||||||||||||||||||||    
T  4169441 gtgcataagaatttccttatgcaccataaccgcg 4169474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 8165805 - 8165761
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  8165805 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 8165761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 17109762 - 17109718
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||    
T  17109762 gatttatgcaaggtacataaggatttccttatgcaccataaccgc 17109718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 17109919 - 17109963
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  17109919 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 17109963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 21995713 - 21995669
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  21995713 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 21995669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 22180249 - 22180205
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  22180249 gatttatgcacggtgcataaggatttccttatgcaccataaccgc 22180205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 25715686 - 25715638
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| |||||||||| ||||||||||||||||||||| |||||    
T  25715686 gatttatgcagggtgcataaggatttccttatgcaccataaccacgccc 25715638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 36924284 - 36924240
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  36924284 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 36924240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 45256896 - 45256940
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  45256896 gatttatgcacggtgcataaggatttccttatgcaccataaccgc 45256940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 6841863 - 6841820
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||    
T  6841863 atttatgcagggtgcataaggatttccttatgcaccataaccgc 6841820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 8157288 - 8157331
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataac 55  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||    
T  8157288 tagatttatgcagggtgcataaggatttccttatgcaccataac 8157331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 10473650 - 10473693
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||    
T  10473650 atttatgcacggtgcataaggatttccttatgcaccataaccgc 10473693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 26577303 - 26577260
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||    
T  26577303 atttatgcacggtgcataaggatttccttatgcaccataaccgc 26577260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 31763110 - 31763153
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||    
T  31763110 atttatgcagggtgcataaggatttccttatgcaccataaccgc 31763153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 53526454 - 53526497
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||||    
T  53526454 atttatgcagggtacataagaatttccttatgcaccataaccgc 53526497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 8157142 - 8157108
Alignment:
Q  26 gtgcataagaatttccttatgcaccataaccgcgc 60  Q
    ||||||| |||||||||||||||||||||||||||    
T  8157142 gtgcataggaatttccttatgcaccataaccgcgc 8157108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 11786105 - 11786147
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  11786105 gatttatgcacggtgcataaggatttccttatgcaccataacc 11786147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 11798272 - 11798314
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  11798272 gatttatgcacggtgcataaggatttccttatgcaccataacc 11798314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 13635660 - 13635618
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  13635660 gatttatgcacggtgcataaggatttccttatgcaccataacc 13635618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 15051071 - 15051029
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  15051071 gatttatgcacggtgcataaggatttccttatgcaccataacc 15051029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 30358838 - 30358880
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  30358838 gatttatgcacggtgcataaggatttccttatgcaccataacc 30358880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 30597830 - 30597872
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  30597830 gatttatgcacggtgcataaggatttccttatgcaccataacc 30597872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 49425992 - 49425950
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  49425992 gatttatgcacggtgcataaggatttccttatgcaccataacc 49425950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 50644671 - 50644713
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  50644671 gatttatgcacggtgcataaggatttccttatgcaccataacc 50644713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 51076943 - 51076901
Alignment:
Q  11 atagatttacgcaaggtgcataagaatttccttatgcaccata 53  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||    
T  51076943 atagatttatgcagggtgcataaggatttccttatgcaccata 51076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 54895584 - 54895626
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  54895584 gatttatgcagggtgcataaggatttccttatgcaccataacc 54895626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 12722769 - 12722736
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  12722769 ggtgcataaggatttccttatgcaccataaccgc 12722736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 21098133 - 21098182
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||||| ||| |||||||||| |||||||||| |||||||||||| ||||    
T  21098133 gatttatgcatggtgcataaggatttccttatacaccataaccgctccct 21098182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 33883326 - 33883293
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  33883326 ggtgcataaggatttccttatgcaccataaccgc 33883293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 56
Target Start/End: Original strand, 47219293 - 47219322
Alignment:
Q  27 tgcataagaatttccttatgcaccataacc 56  Q
    ||||||||||||||||||||||||||||||    
T  47219293 tgcataagaatttccttatgcaccataacc 47219322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 49492447 - 49492406
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataac 55  Q
    |||||| ||| |||||||||| ||||||||||||||||||||    
T  49492447 gatttatgcacggtgcataaggatttccttatgcaccataac 49492406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 54895447 - 54895398
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||||| ||| |||||||||| |||| |||||||||||||||||| ||||    
T  54895447 gatttatgcagggtgcataaggattttcttatgcaccataaccgcaccct 54895398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 638995 - 639035
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataa 54  Q
    |||||| ||| |||||||||| |||||||||||||||||||    
T  638995 gatttatgcacggtgcataaggatttccttatgcaccataa 639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 9813147 - 9813195
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    ||||| ||| |||||||||  ||||||||||||||||||||||| ||||    
T  9813147 atttatgcagggtgcataaagatttccttatgcaccataaccgcaccct 9813195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 25715728 - 25715772
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||| ||||||||||||||||||    
T  25715728 gatttatgcagggtgcataaggattttcttatgcaccataaccgc 25715772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 31762959 - 31762927
Alignment:
Q  27 tgcataagaatttccttatgcaccataaccgcg 59  Q
    |||||||| ||||||||||||||||||||||||    
T  31762959 tgcataaggatttccttatgcaccataaccgcg 31762927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 36309459 - 36309419
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataa 54  Q
    |||||| ||| |||||||||| |||||||||||||||||||    
T  36309459 gatttatgcagggtgcataaggatttccttatgcaccataa 36309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 43374490 - 43374446
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| ||| |||||| |||||||||||||||||||||||    
T  43374490 gatttatgcagggtacataaggatttccttatgcaccataaccgc 43374446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 47567939 - 47567895
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| |||||||||||||| |||| ||||| ||||||||||||    
T  47567939 gatttatgcaaggtgcataaggattttcttattcaccataaccgc 47567895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 51836370 - 51836326
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| | ||||||| ||||||||||||||||||||||||    
T  51836370 gatttatgcacgatgcataaaaatttccttatgcaccataaccgc 51836326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 19384424 - 19384370
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccctaacga 68  Q
    |||||| ||| |||||||||||||||||||||||||||||||||| ||| |||||    
T  19384424 gatttatgcacggtgcataagaatttccttatgcaccataaccgctccccaacga 19384370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 12974055 - 12974007
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  12974055 gatttaggcagggtgcataaggatttccttatgcaccataaccgcgccc 12974007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 19012563 - 19012607
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||    
T  19012563 gatttatgcagggtgcataagaatttccttatgcaccataaccgc 19012607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 16653530 - 16653496
Alignment:
Q  24 aggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||||||||||||||||||||||||||||    
T  16653530 aggtgcataagaatttccttatgcaccataaccgc 16653496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 19012425 - 19012391
Alignment:
Q  24 aggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||||||||||||||||||||||||||||    
T  19012425 aggtgcataagaatttccttatgcaccataaccgc 19012391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 36185769 - 36185719
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgcccta 64  Q
    |||||| ||| | |||||||| |||||||||||||||||||||||||||||    
T  36185769 gatttatgcaggatgcataaggatttccttatgcaccataaccgcgcccta 36185719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 49053257 - 49053220
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  49053257 ggtgcataagaatttccttatgcaccataactgcgccc 49053220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 8036843 - 8036799
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  8036843 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 8036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 8719138 - 8719182
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  8719138 gatttatgcacggtgcataaggatttccttatgcaccataaccgc 8719182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 9071025 - 9071069
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  9071025 gatttatgcacggtgcataaggatttccttatgcaccataaccgc 9071069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 27446215 - 27446255
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataac 55  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  27446215 atttatgcaaggtgcataaggatttccttatgcaccataac 27446255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 36185906 - 36185950
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  36185906 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 36185950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 50416523 - 50416479
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  50416523 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 50416479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 50416565 - 50416609
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  50416565 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 50416609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 10986482 - 10986525
Alignment:
Q  13 agatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||    
T  10986482 agatttatgcacggtgcataaggatttccttatgcaccataacc 10986525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 34562443 - 34562400
Alignment:
Q  13 agatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||    
T  34562443 agatttatgcacggtgcataaggatttccttatgcaccataacc 34562400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 41191453 - 41191410
Alignment:
Q  13 agatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||||| ||| ||||||||||||||||| ||||||||||||||    
T  41191453 agatttatgcacggtgcataagaatttccctatgcaccataacc 41191410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 3475342 - 3475300
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  3475342 gatttatgcacggtgcataaggatttccttatgcaccataacc 3475300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 6097619 - 6097577
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  6097619 gatttatgcacggtgcataaggatttccttatgcaccataacc 6097577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 7045328 - 7045358
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataac 55  Q
    |||||||||||||||||||||||||||||||    
T  7045328 ggtgcataagaatttccttatgcaccataac 7045358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 9106398 - 9106440
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  9106398 gatttatgcacggtgcataaggatttccttatgcaccataacc 9106440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 9595915 - 9595873
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  9595915 gatttatgcacggtgcataaggatttccttatgcaccataacc 9595873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 12974201 - 12974235
Alignment:
Q  24 aggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||||||||| |||||||||||||||||||||||    
T  12974201 aggtgcataaggatttccttatgcaccataaccgc 12974235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 19284802 - 19284844
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  19284802 gatttatgcacggtgcataaggatttccttatgcaccataacc 19284844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 30947846 - 30947804
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  30947846 gatttatgcacggtgcataaggatttccttatgcaccataacc 30947804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 54379293 - 54379335
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  54379293 gatttatgcacggtgcataaggatttccttatgcaccataacc 54379335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 27068564 - 27068531
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  27068564 ggtgcataaggatttccttatgcaccataaccgc 27068531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 47924367 - 47924408
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataac 55  Q
    |||||| ||| |||||||||| ||||||||||||||||||||    
T  47924367 gatttatgcagggtgcataaggatttccttatgcaccataac 47924408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 49450526 - 49450493
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||||||| ||||||||||||||||||||||||    
T  49450526 ggtgcataataatttccttatgcaccataaccgc 49450493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 50755193 - 50755234
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataac 55  Q
    |||||| ||| |||||||||| ||||||||||||||||||||    
T  50755193 gatttatgcacggtgcataaggatttccttatgcaccataac 50755234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 51361555 - 51361522
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  51361555 ggtgcataaggatttccttatgcaccataaccgc 51361522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 2941861 - 2941821
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataa 54  Q
    |||||| ||| |||||||||| |||||||||||||||||||    
T  2941861 gatttatgcacggtgcataaggatttccttatgcaccataa 2941821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 8036990 - 8037034
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| ||||||| |||||||||||||||    
T  8036990 gatttatgcagggtgcataaggatttcctcatgcaccataaccgc 8037034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 16276712 - 16276668
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| ||||| |||||||||||||||||    
T  16276712 gatttatgcacggtgcataaggatttctttatgcaccataaccgc 16276668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 47225849 - 47225897
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| ||| |||||| |||||||||||||||||||| ||||||    
T  47225849 gatttatgcagggtacataaggatttccttatgcaccataactgcgccc 47225897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 38837730 - 38837779
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  38837730 gatttatgcaaggtgcataaggatttccttatgcaccataaccgcaccct 38837779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 34227878 - 34227921
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||    
T  34227878 atttatgcagggtgcataagaatttccttatgcaccataaccgc 34227921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 11732086 - 11732041
Alignment:
Q  13 agatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||    
T  11732086 agatttatgcacggtgcataaggatttccttatgcaccataaccgc 11732041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 26945546 - 26945513
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||||||||||||||||||||||||||||||||    
T  26945546 ggtgcataagaatttccttatgcaccataaccgc 26945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 26945715 - 26945764
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||| ||||    
T  26945715 gatttatgcagggtgcataaggatttccttatgcaccataaccgcaccct 26945764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 34227719 - 34227670
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||||| ||| | |||||||| ||||||||||||||||||||||||||||    
T  34227719 gatttatgcaggttgcataaggatttccttatgcaccataaccgcgccct 34227670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 5728881 - 5728925
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||||    
T  5728881 gatttatgcagggtgcataagaattttcttatgcaccataaccgc 5728925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 15973903 - 15973859
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  15973903 gatttatgcatggtgcataaggatttccttatgcaccataaccgc 15973859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 31365314 - 31365270
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||||| |||||||| |||||||||||||||||||||||    
T  31365314 gatttatgcaagatgcataaggatttccttatgcaccataaccgc 31365270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 44426641 - 44426597
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  44426641 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 44426597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 44426800 - 44426848
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| |||||||||  |||||||||||||||||||||||||||    
T  44426800 gatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 44426848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 45478515 - 45478563
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||||||    
T  45478515 gatttatgcaagatgcataaggattttcttatgcaccataaccgcgccc 45478563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 46004537 - 46004585
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||| ||||    
T  46004537 atttatgcagggtgcataaggatttccttatgcaccataaccgcaccct 46004585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 46572617 - 46572573
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  46572617 gatttatgcatggtgcataaggatttccttatgcaccataaccgc 46572573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16933179 - 16933136
Alignment:
Q  13 agatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||    
T  16933179 agatttatgcacggtgcataaggatttccttatgcaccataacc 16933136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16938562 - 16938519
Alignment:
Q  13 agatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||    
T  16938562 agatttatgcacggtgcataaggatttccttatgcaccataacc 16938519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 31660199 - 31660242
Alignment:
Q  13 agatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||    
T  31660199 agatttatgcacggtgcataaggatttccttatgcaccataacc 31660242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 48692051 - 48692094
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccg 57  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||    
T  48692051 gatttatgcacggtgcataaggatttccttatgcaccataaccg 48692094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 30884157 - 30884115
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  30884157 gatttatgcacggtgcataaggatttccttatgcaccataacc 30884115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 32685888 - 32685838
Alignment:
Q  13 agatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    ||||||| ||| |||| ||||| ||||||||||||||||||||||| ||||    
T  32685888 agatttatgcacggtgtataaggatttccttatgcaccataaccgctccct 32685838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 33798734 - 33798776
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||||| | |||||||||| |||||||||||||||||||||    
T  33798734 gatttacgtacggtgcataaggatttccttatgcaccataacc 33798776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 35737079 - 35737121
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  35737079 gatttatgcacggtgcataaggatttccttatgcaccataacc 35737121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 41911047 - 41911005
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  41911047 gatttatgcacggtgcataaggatttccttatgcaccataacc 41911005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 46358651 - 46358693
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  46358651 gatttatgcacggtgcataaggatttccttatgcaccataacc 46358693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 47340278 - 47340320
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  47340278 gatttatgcacggtgcataaggatttccttatgcaccataacc 47340320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 6620813 - 6620846
Alignment:
Q  29 cataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| |||||||||||||||||||||||||||    
T  6620813 cataaggatttccttatgcaccataaccgcgccc 6620846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 48830601 - 48830642
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||| ||| |||||||||| |||||||||||||||||||||    
T  48830601 atttatgcacggtgcataaggatttccttatgcaccataacc 48830642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 5728668 - 5728624
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| |||||||||||||| ||||||| |||||| ||||||||    
T  5728668 gatttatgcaaggtgcataaggatttcctcatgcactataaccgc 5728624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 41065971 - 41066019
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    ||||| ||| ||| |||||| ||||||||||||||||||||||| ||||    
T  41065971 atttatgcagggtacataaggatttccttatgcaccataaccgcaccct 41066019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 43742292 - 43742248
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| | |||||||| |||||||||||||||||||||||    
T  43742292 gatttatgcaggatgcataaggatttccttatgcaccataaccgc 43742248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 42134134 - 42134187
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccctaacg 67  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  42134134 gatttatgcagggtgcataaggatttccttatgcaccataaccgcgccccaacg 42134187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 32595147 - 32595103
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||    
T  32595147 gatttatgcagggtgcataagaatttccttatgcaccataaccgc 32595103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 12070612 - 12070655
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||    
T  12070612 atttatgcagggtgcataagaatttccttatgcaccataaccgc 12070655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 9628600 - 9628646
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgc 60  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||||    
T  9628600 gatttatgcagggtgcataaggatttccttatgcaccataaccgcgc 9628646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 32595282 - 32595332
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||| |||||    
T  32595282 tagatttaagcagggtgcataaggatttccttatgcaccataaccacgccc 32595332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 12796466 - 12796422
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| |||||||||| ||| |||||||||||||||||||||||    
T  12796466 gatttatgcaaggtgcagaaggatttccttatgcaccataaccgc 12796422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 17811295 - 17811331
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgcgcc 61  Q
    |||||||||| ||||||||||||||||||||||||||    
T  17811295 ggtgcataaggatttccttatgcaccataaccgcgcc 17811331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 17893115 - 17893067
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| |||||||||| ||||||||||||||||||||| |||||    
T  17893115 gatttatgcagggtgcataaggatttccttatgcaccataaccacgccc 17893067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 17893275 - 17893323
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||| ||||    
T  17893275 atttatgcagggtgcataaggatttccttatgcaccataaccgcaccct 17893323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 18928956 - 18929004
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| |||||||||  |||||||||||||||||||||||||||    
T  18928956 gatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 18929004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 23174445 - 23174401
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||||    
T  23174445 gatttatgcacggtgcataagaattttcttatgcaccataaccgc 23174401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 29945429 - 29945465
Alignment:
Q  26 gtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    ||||||||| |||||||||||||||||||||||||||    
T  29945429 gtgcataaggatttccttatgcaccataaccgcgccc 29945465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 33157035 - 33156991
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  33157035 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 33156991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 45849151 - 45849103
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| |||||||||| ||||||||||||||||||| |||||||    
T  45849151 gatttatgcagggtgcataaggatttccttatgcaccataatcgcgccc 45849103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 45849310 - 45849350
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataa 54  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  45849310 gatttatgcagggtgcataagaatttccttatgcaccataa 45849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 1395353 - 1395396
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||    
T  1395353 atttatgcatggtgcataaggatttccttatgcaccataaccgc 1395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 10974675 - 10974632
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||    
T  10974675 atttatgcagggtgcataaggatttccttatgcaccataaccgc 10974632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 14229214 - 14229171
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||    
T  14229214 atttatgcagggtgcataaggatttccttatgcaccataaccgc 14229171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 16976086 - 16976128
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  16976086 gatttatgcacggtgcataaggatttccttatgcaccataacc 16976128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 18057810 - 18057860
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgcccta 64  Q
    |||||| ||| |||||||||| |||||||||| |||||||||||| |||||    
T  18057810 gatttatgcacggtgcataaggatttccttatacaccataaccgctcccta 18057860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 23817441 - 23817483
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  23817441 gatttatgcacggtgcataaggatttccttatgcaccataacc 23817483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 24368624 - 24368662
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  24368624 ggtgcataaggattttcttatgcaccataaccgcgccct 24368662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 24636057 - 24636099
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  24636057 gatttatgcacggtgcataaggatttccttatgcaccataacc 24636099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 32143768 - 32143814
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||| |||  ||||||||| |||||||||||||||||||||||    
T  32143768 tagatttatgcagagtgcataaggatttccttatgcaccataaccgc 32143814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 42133989 - 42133943
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||| ||| | |||||||| |||||||||||||||||||||||    
T  42133989 tagatttatgcaggatgcataaggatttccttatgcaccataaccgc 42133943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 43452673 - 43452715
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  43452673 gatttatgcacggtgcataaggatttccttatgcaccataacc 43452715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 48762266 - 48762224
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  48762266 gatttatgcacggtgcataaggatttccttatgcaccataacc 48762224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 49936872 - 49936830
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  49936872 gatttatgcacggtgcataaggatttccttatgcaccataacc 49936830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 9041063 - 9041096
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  9041063 ggtgcataaggatttccttatgcaccataaccgc 9041096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 31763985 - 31764018
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  31763985 ggtgcataaggatttccttatgcaccataaccgc 31764018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 14229362 - 14229406
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||  |||||||||||||||||||||||    
T  14229362 gatttatgcagggtgcataaagatttccttatgcaccataaccgc 14229406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 23921014 - 23920970
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| | |||||||| |||||||||||||||||||||||    
T  23921014 gatttatgcacgatgcataaggatttccttatgcaccataaccgc 23920970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 49992549 - 49992517
Alignment:
Q  26 gtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||||||| |||||||||||||||||||||||    
T  49992549 gtgcataaggatttccttatgcaccataaccgc 49992517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 22695541 - 22695585
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  22695541 gatttatgcaaggtgcataaggatttccttatgcaccataaccgc 22695585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 35662234 - 35662282
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  35662234 gatttatgcagggtgcataagtatttccttatgcaccataaccgcgccc 35662282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 36864112 - 36864066
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||| |||  |||||||||||||||||||||||||||||||||    
T  36864112 tagatttatgcagtgtgcataagaatttccttatgcaccataaccgc 36864066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 5411768 - 5411801
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||||||||||||||||||||||||||||||||    
T  5411768 ggtgcataagaatttccttatgcaccataaccgc 5411801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 15559091 - 15559043
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||| ||||    
T  15559091 atttatgcatggtgcataaggatttccttatgcaccataaccgcaccct 15559043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 39861781 - 39861825
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  39861781 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 39861825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 3340632 - 3340589
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||    
T  3340632 atttatgcagggtgcataaggatttccttatgcaccataaccgc 3340589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 11660983 - 11661026
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccg 57  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||    
T  11660983 gatttatgcagggtgcataaggatttccttatgcaccataaccg 11661026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 3883970 - 3883928
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  3883970 gatttatgcacggtgcataaggatttccttatgcaccataacc 3883928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 14394599 - 14394641
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  14394599 gatttatgcacggtgcataaggatttccttatgcaccataacc 14394641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 14940291 - 14940249
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  14940291 gatttatgcacggtgcataaggatttccttatgcaccataacc 14940249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 26637772 - 26637730
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  26637772 gatttatgcacggtgcataaggatttccttatgcaccataacc 26637730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 37456811 - 37456853
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  37456811 gatttatgcatggtgcataaggatttccttatgcaccataacc 37456853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 39166194 - 39166152
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||||||||||||||||||| |||||    
T  39166194 gatttatgcagggtgcataagaatttccttatgcaccgtaacc 39166152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 11660825 - 11660792
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  11660825 ggtgcataaggatttccttatgcaccataaccgc 11660792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 23155567 - 23155526
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||| ||| |||||||||| |||||||||||||||||||||    
T  23155567 atttatgcagggtgcataaggatttccttatgcaccataacc 23155526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 23155844 - 23155885
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataac 55  Q
    |||||| |||||||||||||| ||||| ||||||||||||||    
T  23155844 gatttatgcaaggtgcataaggatttcattatgcaccataac 23155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 25545584 - 25545617
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  25545584 ggtgcataaggatttccttatgcaccataaccgc 25545617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 35662099 - 35662066
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  35662099 ggtgcataaggatttccttatgcaccataaccgc 35662066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 36864281 - 36864318
Alignment:
Q  26 gtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  36864281 gtgcataaggatttccttatacaccataaccgcgccct 36864318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 13363795 - 13363839
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||| ||||||||||||||    
T  13363795 gatttatgcacggtgcataaggatttccttgtgcaccataaccgc 13363839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 20134242 - 20134198
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| | |||||||| |||||||||||||||||||||||    
T  20134242 gatttatgcaggctgcataaggatttccttatgcaccataaccgc 20134198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 20134412 - 20134444
Alignment:
Q  26 gtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||||||| |||||||||||||||||||||||    
T  20134412 gtgcataaggatttccttatgcaccataaccgc 20134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 20696328 - 20696372
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||| ||||| |||||||||||||||||||||||    
T  20696328 gatttatgcagggtgaataaggatttccttatgcaccataaccgc 20696372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 22830801 - 22830837
Alignment:
Q  26 gtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  22830801 gtgcataaggatttccttatgcaccataactgcgccc 22830837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 34726797 - 34726841
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||    
T  34726797 gatttatgcagggtgcataagaatttccttatgcaccataaccgc 34726841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 15016502 - 15016459
Alignment:
Q  13 agatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  15016502 agatttatgcacggtgcataagaatttccttatgcaccataacc 15016459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 20661442 - 20661395
Alignment:
Q  11 atagatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  20661442 atagatttatgcagggtgcataaggatttccttatgcaccataaccgc 20661395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 20194026 - 20194072
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||| | | ||||||||||||||||||||||||||||||||||    
T  20194026 tagatttatgtagggtgcataagaatttccttatgcaccataaccgc 20194072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 42364694 - 42364743
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||||| ||| |||||||||| |||||||| |||||||||||||||||||    
T  42364694 gatttatgcagggtgcataaggatttccttttgcaccataaccgcgccct 42364743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 12449245 - 12449293
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    ||||| |||||||||||||  ||||||||||||||||||||||| ||||    
T  12449245 atttatgcaaggtgcataaagatttccttatgcaccataaccgcaccct 12449293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 16111706 - 16111754
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| |||||||||  |||||||||||||||||||||||||||    
T  16111706 gatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 16111754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 24183599 - 24183647
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||| ||||    
T  24183599 atttatgcagggtgcataaggatttccttatgcaccataaccgcaccct 24183647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 31783836 - 31783792
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  31783836 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 31783792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 44915492 - 44915536
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  44915492 gatttatgcagggtgcataagcatttccttatgcaccataaccgc 44915536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 23182224 - 23182275
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||||| | ||| ||||||||||||||||||||| |||||||||||| ||||    
T  23182224 tagattaatgcagggtgcataagaatttccttattcaccataaccgcaccct 23182275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 23593481 - 23593532
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||||| | ||| ||||||||||||||||||||| |||||||||||| ||||    
T  23593481 tagattaatgcagggtgcataagaatttccttattcaccataaccgcaccct 23593532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 37867357 - 37867404
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    ||||| ||| |||||||||| ||||||||||||||| |||||||||||    
T  37867357 atttatgcagggtgcataaggatttccttatgcaccgtaaccgcgccc 37867404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 7487189 - 7487147
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  7487189 gatttatgcacggtgcataaggatttccttatgcaccataacc 7487147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 34726647 - 34726605
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  34726647 gatttatgcagggtgcataaggatttccttatgcaccataacc 34726605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 39355166 - 39355208
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  39355166 gatttatgcacggtgcataaggatttccttatgcaccataacc 39355208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 1292113 - 1292072
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||| ||| |||||||||| |||||||||||||||||||||    
T  1292113 atttatgcacggtgcataaggatttccttatgcaccataacc 1292072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 55
Target Start/End: Original strand, 14551347 - 14551376
Alignment:
Q  26 gtgcataagaatttccttatgcaccataac 55  Q
    ||||||||||||||||||||||||||||||    
T  14551347 gtgcataagaatttccttatgcaccataac 14551376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 31783997 - 31784030
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  31783997 ggtgcataaggatttccttatgcaccataaccgc 31784030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 41345129 - 41345088
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||| ||| |||||||||| |||||||||||||||||||||    
T  41345129 atttatgcacggtgcataaggatttccttatgcaccataacc 41345088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 12449085 - 12449053
Alignment:
Q  26 gtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||||||| |||||||||||||||||||||||    
T  12449085 gtgcataaggatttccttatgcaccataaccgc 12449053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 18297211 - 18297167
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||| ||||||||||||||||    
T  18297211 gatttatgcacggtgcataaggatttccctatgcaccataaccgc 18297167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 19246704 - 19246664
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataac 55  Q
    ||||| ||| |||||||||| ||||||||||||||||||||    
T  19246704 atttatgcagggtgcataaggatttccttatgcaccataac 19246664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 22596347 - 22596303
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||| ||||||||||||    
T  22596347 gatttatgcagggtgcataaggatttccttatacaccataaccgc 22596303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 22596505 - 22596549
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| ||| |||||| |||||||||||||||||||||||    
T  22596505 gatttatgcagggtacataaggatttccttatgcaccataaccgc 22596549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 30777338 - 30777290
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgccc 62  Q
    |||||| ||| |||||||||| ||||  |||||||||||||||||||||    
T  30777338 gatttatgcagggtgcataaggatttttttatgcaccataaccgcgccc 30777290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 31711553 - 31711509
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| ||| |||||| |||||||||||||||||||||||    
T  31711553 gatttatgcagggtacataaggatttccttatgcaccataaccgc 31711509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000005; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 23567644 - 23567687
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccg 57  Q
    |||||| ||| |||||||||||||||||||||||||||||||||    
T  23567644 gatttatgcagggtgcataagaatttccttatgcaccataaccg 23567687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 4835561 - 4835517
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  4835561 gatttatgcacggtgcataaggatttccttatgcaccataaccgc 4835517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 17792893 - 17792937
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  17792893 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 17792937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 18757328 - 18757376
Alignment:
Q  13 agatttacgcaaggtgcataagaatttccttatgcaccataaccgcgcc 61  Q
    ||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  18757328 agatttatgcagggtgcataaggatttctttatgcaccataaccgcgcc 18757376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 35448611 - 35448655
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  35448611 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 35448655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 34343453 - 34343496
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||||    
T  34343453 atttatgcagggtgcataataatttccttatgcaccataaccgc 34343496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 35301673 - 35301630
Alignment:
Q  13 agatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||    
T  35301673 agatttatgcacggtgcataaggatttccttatgcaccataacc 35301630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 39657751 - 39657708
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccg 57  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||    
T  39657751 gatttatgcacggtgcataaggatttccttatgcaccataaccg 39657708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 23397444 - 23397486
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  23397444 gatttatgcatggtgcataaggatttccttatgcaccataacc 23397486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 34633256 - 34633214
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  34633256 gatttatgcacggtgcataaggatttccttatgcaccataacc 34633214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 39023011 - 39023049
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  39023011 ggtgtataagaatttccttatgcaccataaccgctccct 39023049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 1149957 - 1149916
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    ||||| ||| |||||||||| |||||||||||||||||||||    
T  1149957 atttatgcacggtgcataaggatttccttatgcaccataacc 1149916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 1672932 - 1672973
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataac 55  Q
    |||||| ||| |||||||||| ||||||||||||||||||||    
T  1672932 gatttatgcagggtgcataaggatttccttatgcaccataac 1672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 15809852 - 15809885
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  15809852 ggtgcataaggatttccttatgcaccataaccgc 15809885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 17656649 - 17656612
Alignment:
Q  26 gtgcataagaatttccttatgcaccataaccgcgccct 63  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  17656649 gtgcataaggatttccttatgcaccataaccgcaccct 17656612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 27506749 - 27506708
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataac 55  Q
    |||||| ||| |||||||||| ||||||||||||||||||||    
T  27506749 gatttatgcagggtgcataaggatttccttatgcaccataac 27506708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 1209787 - 1209827
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataa 54  Q
    |||||| ||| |||||||||| |||||||||||||||||||    
T  1209787 gatttatgcacggtgcataaggatttccttatgcaccataa 1209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 15259898 - 15259854
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||| ||||||||||    
T  15259898 gatttatgcacggtgcataaggatttccttatgccccataaccgc 15259854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 15808928 - 15808884
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||| ||||||||||||||||||    
T  15808928 gatttatgcagggtgcataaggattttcttatgcaccataaccgc 15808884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 23567517 - 23567485
Alignment:
Q  26 gtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||||||| |||||||||||||||||||||||    
T  23567517 gtgcataaggatttccttatgcaccataaccgc 23567485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 24473256 - 24473288
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataaccg 57  Q
    |||||||||| ||||||||||||||||||||||    
T  24473256 ggtgcataaggatttccttatgcaccataaccg 24473288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 33661 - 33615
Alignment:
Q  12 tagatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||||    
T  33661 tagatttatgcagggtgcataaggatttccttatgcaccataaccgc 33615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 33827 - 33861
Alignment:
Q  24 aggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||||||||||||||||||||||||||||||||    
T  33827 aggtgcataagaatttccttatgcaccataaccgc 33861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 15914 - 15946
Alignment:
Q  26 gtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||||||||||||||||||| |||||||||||    
T  15914 gtgcataagaatttccttatgtaccataaccgc 15946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 1249 - 1293
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  1249 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 1293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 23587 - 23543
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||    
T  23587 gatttatgcagggtgcataaggatttccttatgcaccataaccgc 23543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 23736 - 23786
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgcgcccta 64  Q
    |||||| ||| |||||||||| ||||||||||||||||||| ||| |||||    
T  23736 gatttatgcagggtgcataaggatttccttatgcaccataatcgcacccta 23786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 20122 - 20165
Alignment:
Q  15 atttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||    
T  20122 atttatgcagggtgcataaggatttccttatgcaccataaccgc 20165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 44814 - 44783
Alignment:
Q  25 ggtgcataagaatttccttatgcaccataacc 56  Q
    ||||||||||||||||||||||||||||||||    
T  44814 ggtgcataagaatttccttatgcaccataacc 44783  T

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Target: scaffold0074; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 24405 - 24447
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  24405 gatttatgcacggtgcataaggatttccttatgcaccataacc 24447  T

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Target: scaffold0571 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 588 - 546
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataacc 56  Q
    |||||| ||| |||||||||| |||||||||||||||||||||    
T  588 gatttatgcacggtgcataaggatttccttatgcaccataacc 546  T

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Target: scaffold0338 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 6514 - 6555
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataac 55  Q
    |||||| ||| |||||||||| ||||||||||||||||||||    
T  6514 gatttatgcatggtgcataaggatttccttatgcaccataac 6555  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 28676 - 28720
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataaccgc 58  Q
    |||||| ||| |||||| ||| |||||||||||||||||||||||    
T  28676 gatttaagcacggtgcaaaaggatttccttatgcaccataaccgc 28720  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 51948 - 51908
Alignment:
Q  14 gatttacgcaaggtgcataagaatttccttatgcaccataa 54  Q
    |||||| ||| |||||||||| |||||||||||||||||||    
T  51948 gatttatgcagggtgcataaggatttccttatgcaccataa 51908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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