View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19658_low_73 (Length: 295)
Name: NF19658_low_73
Description: NF19658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19658_low_73 |
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Alignment Details
Target: chr4 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 17 - 287
Target Start/End: Original strand, 22362797 - 22363067
Alignment:
| Q |
17 |
tccaccaatatagaaaggctacataaaattgaagaatgttagaaaaacatggtaacaagttaacataaagtggataatatgtaagtgaaacatgtgaaat |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
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| T |
22362797 |
tccaccaatatagaaaggctacataaaattgaagaatgttagaaaaacatggtaacaagataacataaagtggataatatgtgagtgaaacatgtgaaat |
22362896 |
T |
|
| Q |
117 |
tatagatgcatatatgtacctgaaaagtatcacctaaacttgtagaggggtcaaaactgcatatgacatgaagtctctgaccttcacctatattcactaa |
216 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22362897 |
tatagaagcatatatgtacctgaaaagtatcacctaaacttgtagaggggtcaaaactgcatatgacatgaagtctctgaccttcacctatattcactaa |
22362996 |
T |
|
| Q |
217 |
ataaaatacagtacctgctggaattacatacaaatcccccgtctttattctcctttcctctagttcatctc |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
22362997 |
ataaaatacagtacctgctggaattacatacaaatcccctgtctttattctcctttcctctagttcatctc |
22363067 |
T |
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