View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19660_high_4 (Length: 263)
Name: NF19660_high_4
Description: NF19660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19660_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 51921951 - 51921719
Alignment:
| Q |
13 |
aatattgtagtatgatgtggaagagttacgcgtaatgatacaagtttggattttgtatttttctaagtgtgtggcccttatattgcaaaacttttagggc |
112 |
Q |
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| T |
51921951 |
aatattttagtacgatgtggaagagttacgggtaatgatacaagtttggattttgtatttttctaagtgtgtggcccttatattgcaaaacttttagggc |
51921852 |
T |
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| Q |
113 |
gagggtgtttggagggttgcgattgatatgtgatcgtggaaccattggagcggatctgcagctccatggaatttattgagcattattcatagattattga |
212 |
Q |
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| T |
51921851 |
gagggtgtttggagggttgcgattgatatgtgatcgtggaaccattggagcggatctgcagctccatggaatttattgagcattattcatagattattga |
51921752 |
T |
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| Q |
213 |
agttggtttgagaggttcaaattcatcattttt |
245 |
Q |
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|||| |||||||||||||||||||||||||||| |
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| T |
51921751 |
agttcgtttgagaggttcaaattcatcattttt |
51921719 |
T |
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