View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19660_low_3 (Length: 266)
Name: NF19660_low_3
Description: NF19660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19660_low_3 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 52807797 - 52807560
Alignment:
| Q |
13 |
taggaggtatgaagtagaggatgttgcagggtgtgaaaagttgaaaggggttgtgcctcaacaaaatggacattggggtgcacaaatatatgcaaatcac |
112 |
Q |
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| T |
52807797 |
taggaggtatgaagtagaggatgttgcagggtgtgaaaagttgaaaggggttgtgcctcaacaaaatggacattggggtgcacaaatatatgcaaatcac |
52807698 |
T |
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| Q |
113 |
caaagaatatggttagggacattcaaatctgaaagagatgctgccatggcttacgacagcgccaccattaagctcagaagcagagaaagccatagaaact |
212 |
Q |
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| T |
52807697 |
caaagaatatggttagggacattcaaatctgaaagagatgctgccatggcttacgacagcgccaccattaagctcagaagcagagaaagccatagaaact |
52807598 |
T |
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| Q |
213 |
ttgcatggaataaccaaacagttgaagaacctatgttt |
250 |
Q |
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||||||||||||||||||||||| |||||||||||||| |
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| T |
52807597 |
ttgcatggaataaccaaacagttcaagaacctatgttt |
52807560 |
T |
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