View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19662_high_9 (Length: 224)
Name: NF19662_high_9
Description: NF19662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19662_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 23965266 - 23965466
Alignment:
| Q |
16 |
catgaggatccgttgaatgaagattcatcggagcttctgcagagtgaggatgaggatatgttaagtgatgattcacatgaggatgaaacggatgaggacg |
115 |
Q |
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| T |
23965266 |
catgaggatccgttgaatgaagattcatcggagcttcagcagagtgaggatgaggatatgttaagtgaagattcacatgaggatgaagcggatgaggacg |
23965365 |
T |
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| Q |
116 |
aggatgatgatcaatatgaggatcagttgagtgaagcttcaaatgaggtttcatctgagagtgagtggaatcaggatttgtctgaggatcataatgatga |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23965366 |
aggatgatgatcaatatgaggatcagttgagtgaagcttcaaatgaggtttcatctgagagtgagtggaatcaggatttgtctgaggatcataatgatga |
23965465 |
T |
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| Q |
216 |
t |
216 |
Q |
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| T |
23965466 |
t |
23965466 |
T |
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