View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19664_high_16 (Length: 273)
Name: NF19664_high_16
Description: NF19664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19664_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 19 - 263
Target Start/End: Complemental strand, 2834364 - 2834120
Alignment:
| Q |
19 |
gataaaccaatgtaagtacccttgaaggatgatatttcttcagagtgaaacaaagcatataatcaataattcatctcatatttcatgaagtctcaaataa |
118 |
Q |
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| T |
2834364 |
gataaaccaatgtaagtacccttgaaggatgatatttcttcagagtgaaacaaagcatataatcaataattcatctcatatttcatgaagtctcaaataa |
2834265 |
T |
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| Q |
119 |
tttaatcagaaacagaaactttccagttgacattctttgtaagacgagcatttaactattgttcttaagaaaaatttggtacaaccatgttaagccgaga |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
2834264 |
tttaatcagaaacagaaactttccagttgacattctttgtaagacgagcatttaactattgttcttaagaaaaatttggtacaaccatgttaagctgaga |
2834165 |
T |
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| Q |
219 |
cgctagttacttaccgggaacaatttgtaatagtaatctcctatg |
263 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
2834164 |
cgctagttacttaccgggaacaaattgtaatagtaatctcctatg |
2834120 |
T |
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