View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19665_low_5 (Length: 286)
Name: NF19665_low_5
Description: NF19665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19665_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 32736069 - 32736314
Alignment:
| Q |
17 |
ggtagtaataatataatgtaactaaaaaagaaggacaagatattggtgaaatgatgaaatcatagatctgaattgtcaatgcaattttgttgtatgattc |
116 |
Q |
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| T |
32736069 |
ggtagtaataatataatgtaactaaaaaagaaggacaagatattggtgaaatgatgaaatcatagatctgaattgtcaatgcaattttgttgtatgattc |
32736168 |
T |
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| Q |
117 |
ttatgatcttcaagacaaagaagaagtgaagaacttgtgcaactttggtgatgggaaatggatgttgtatctattcatttttatgatcatgggaaggaga |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32736169 |
ttatgatcttcaagacaaagaagaagtgaagaacttgtgaaattttggtgatgggaaatggatgttgtatctattcatttttatgatcatgggaaggaga |
32736268 |
T |
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| Q |
217 |
gggagcacatgtgtatttggaaaaggacataagttgtggaatggag |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32736269 |
gggagcacatgtgtatttggaaaaggacataagttgtggaatggag |
32736314 |
T |
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