View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19666_high_13 (Length: 242)

Name: NF19666_high_13
Description: NF19666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19666_high_13
NF19666_high_13
[»] chr8 (58 HSPs)
chr8 (3-229)||(15624266-15624491)
chr8 (3-229)||(15648054-15648279)
chr8 (3-228)||(15605886-15606110)
chr8 (3-228)||(15614239-15614463)
chr8 (1-229)||(15637225-15637452)
chr8 (1-229)||(15614055-15614282)
chr8 (1-229)||(15605703-15605929)
chr8 (1-223)||(15637048-15637269)
chr8 (4-229)||(15637592-15637817)
chr8 (3-229)||(15637408-15637634)
chr8 (6-229)||(15613737-15613949)
chr8 (1-225)||(15636875-15637086)
chr8 (6-229)||(15605384-15605596)
chr8 (3-229)||(15624094-15624308)
chr8 (3-229)||(15647882-15648096)
chr8 (105-229)||(15624449-15624573)
chr8 (2-156)||(10894517-10894670)
chr8 (2-96)||(15605652-15605746)
chr8 (109-229)||(15648237-15648357)
chr8 (3-96)||(15614004-15614098)
chr8 (2-160)||(16250381-16250537)
chr8 (2-86)||(15605343-15605427)
chr8 (13-139)||(20540820-20540945)
chr8 (2-86)||(15613696-15613780)
chr8 (2-86)||(15636830-15636914)
chr8 (2-86)||(15923839-15923923)
chr8 (28-96)||(38050224-38050292)
chr8 (133-229)||(15613910-15614008)
chr8 (2-153)||(10895839-10895988)
chr8 (107-229)||(15923880-15923991)
chr8 (139-229)||(15605557-15605649)
chr8 (110-160)||(4930230-4930280)
chr8 (106-160)||(15613461-15613515)
chr8 (12-62)||(15647865-15647915)
chr8 (106-159)||(287360-287413)
chr8 (104-159)||(10895900-10895955)
chr8 (12-55)||(15624084-15624127)
chr8 (106-160)||(15605109-15605162)
chr8 (163-229)||(15606068-15606134)
chr8 (163-229)||(15614421-15614487)
chr8 (163-229)||(15637776-15637842)
chr8 (2-84)||(23689219-23689301)
chr8 (29-156)||(25113391-25113517)
chr8 (2-153)||(287297-287446)
chr8 (32-84)||(23136464-23136516)
chr8 (2-61)||(8362285-8362344)
chr8 (106-160)||(15923603-15923658)
chr8 (106-153)||(17895020-17895067)
chr8 (29-84)||(35136703-35136758)
chr8 (104-150)||(12167179-12167225)
chr8 (104-150)||(12411607-12411653)
chr8 (29-61)||(25063972-25064004)
chr8 (28-84)||(45251064-45251120)
chr8 (104-150)||(16291991-16292037)
chr8 (2-84)||(18666771-18666853)
chr8 (180-229)||(10894511-10894560)
chr8 (163-220)||(15648382-15648439)
chr8 (107-159)||(23161087-23161139)
[»] chr3 (11 HSPs)
chr3 (28-152)||(30160475-30160598)
chr3 (2-160)||(5750593-5750752)
chr3 (2-160)||(5787552-5787711)
chr3 (32-152)||(20795346-20795465)
chr3 (32-96)||(37197829-37197893)
chr3 (2-61)||(2766111-2766170)
chr3 (106-153)||(6445164-6445211)
chr3 (32-84)||(20919268-20919320)
chr3 (32-84)||(20928230-20928282)
chr3 (4-84)||(50246662-50246742)
chr3 (106-153)||(37187514-37187561)
[»] chr6 (18 HSPs)
chr6 (28-152)||(21992607-21992730)
chr6 (21-160)||(33452312-33452450)
chr6 (21-160)||(13705487-13705623)
chr6 (2-96)||(15654058-15654152)
chr6 (2-96)||(15664011-15664105)
chr6 (32-96)||(4856970-4857034)
chr6 (31-159)||(30890047-30890176)
chr6 (163-223)||(15654035-15654095)
chr6 (28-84)||(27434710-27434766)
chr6 (106-153)||(4749520-4749567)
chr6 (28-159)||(7823696-7823827)
chr6 (105-160)||(15654194-15654249)
chr6 (105-160)||(15664143-15664198)
chr6 (170-223)||(15663995-15664048)
chr6 (32-96)||(11550248-11550312)
chr6 (4-44)||(33010452-33010492)
chr6 (110-159)||(27434751-27434800)
chr6 (32-60)||(1608073-1608101)
[»] chr5 (6 HSPs)
chr5 (12-160)||(501080-501228)
chr5 (2-160)||(36647930-36648087)
chr5 (2-84)||(27588593-27588675)
chr5 (32-84)||(9663083-9663135)
chr5 (104-150)||(19205901-19205947)
chr5 (104-150)||(29857766-29857812)
[»] scaffold0114 (1 HSPs)
scaffold0114 (2-160)||(34283-34440)
[»] scaffold0490 (1 HSPs)
scaffold0490 (32-152)||(9160-9279)
[»] chr1 (11 HSPs)
chr1 (32-149)||(19095360-19095476)
chr1 (2-84)||(8314046-8314128)
chr1 (2-84)||(22544225-22544307)
chr1 (9-61)||(45914946-45914998)
chr1 (2-151)||(3417283-3417429)
chr1 (2-84)||(15535296-15535378)
chr1 (31-96)||(8106933-8106998)
chr1 (31-96)||(8111579-8111644)
chr1 (106-153)||(8314018-8314065)
chr1 (104-159)||(11440855-11440910)
chr1 (2-63)||(46514343-46514404)
[»] chr4 (10 HSPs)
chr4 (28-160)||(37069675-37069804)
chr4 (27-149)||(17461926-17462046)
chr4 (110-160)||(13923280-13923330)
chr4 (2-153)||(24074-24223)
chr4 (106-159)||(24107-24160)
chr4 (28-84)||(18066791-18066847)
chr4 (107-153)||(14288144-14288190)
chr4 (110-159)||(18066757-18066806)
chr4 (106-150)||(13914737-13914781)
chr4 (32-84)||(35647971-35648023)
[»] chr2 (10 HSPs)
chr2 (2-96)||(11127744-11127838)
chr2 (163-228)||(11127721-11127786)
chr2 (28-84)||(20103506-20103562)
chr2 (106-159)||(45049532-45049585)
chr2 (104-150)||(5243259-5243305)
chr2 (28-86)||(21119852-21119910)
chr2 (104-153)||(45049569-45049618)
chr2 (2-61)||(24972284-24972343)
chr2 (110-159)||(16311634-16311683)
chr2 (32-84)||(41747366-41747418)
[»] chr7 (3 HSPs)
chr7 (2-61)||(7946571-7946630)
chr7 (28-84)||(29493982-29494038)
chr7 (104-160)||(30878820-30878876)
[»] scaffold0022 (1 HSPs)
scaffold0022 (106-159)||(101135-101188)
[»] scaffold0003 (2 HSPs)
scaffold0003 (28-84)||(52597-52653)
scaffold0003 (110-159)||(52563-52612)
[»] scaffold0155 (1 HSPs)
scaffold0155 (3-78)||(26639-26714)
[»] scaffold0018 (1 HSPs)
scaffold0018 (104-159)||(67272-67327)
[»] scaffold0289 (1 HSPs)
scaffold0289 (2-84)||(22182-22264)
[»] scaffold0059 (2 HSPs)
scaffold0059 (32-84)||(67250-67302)
scaffold0059 (32-84)||(75355-75407)


Alignment Details
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 15624491 - 15624266
Alignment:
Q  3 tacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnn 102  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||          
T  15624491 tacacgtgacatcttcatatttctcatctcatttaatgttttcttatcatccaatcaaaaaagattttgacacatttattttatatcaaccaatagaaaa 15624392  T
Q  103 ntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttc 202  Q
      |||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15624391 a-ggatcatgactcatttgtttttcatcagccaatcaaaatggatcatgactcatttaaaatttaccttccttcaaattaaaattacacgtggcatcttc 15624293  T
Q  203 atatttttcctctcatttaatgttttc 229  Q
    |||||| ||||||||||||||||||||    
T  15624292 atatttgtcctctcatttaatgttttc 15624266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 15648279 - 15648054
Alignment:
Q  3 tacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnn 102  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||          
T  15648279 tacacctgacatcttcatatttctcatctcatttaatgttttcttatcatccaatcaaaaaagattttgacacatttattttatatcaaccaatagaaaa 15648180  T
Q  103 ntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttc 202  Q
      |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15648179 a-ggatcatgactcatttgtttttcatgagccaatcaaaatggatcatgactcatttaaaatttaccttccttcaaattaaaattacacgtggcatcttc 15648081  T
Q  203 atatttttcctctcatttaatgttttc 229  Q
    |||||| ||||||||||||||||||||    
T  15648080 atatttgtcctctcatttaatgttttc 15648054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 3 - 228
Target Start/End: Complemental strand, 15606110 - 15605886
Alignment:
Q  3 tacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnn 102  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||          
T  15606110 tacatgtgatatcttcatatttctcatctcatttaatgttttcttatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaaaa 15606011  T
Q  103 ntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttc 202  Q
     || |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||    
T  15606010 atg-atcatgactcatttgtttttcatgagccaatcataatggatcatgactcatttgaaatttactttccttcaaattaaatgtacacgtgacatcttc 15605912  T
Q  203 atatttttcctctcatttaatgtttt 228  Q
    |||||| || ||||||||||||||||    
T  15605911 atatttctcatctcatttaatgtttt 15605886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 3 - 228
Target Start/End: Complemental strand, 15614463 - 15614239
Alignment:
Q  3 tacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnn 102  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||          
T  15614463 tacatgtgatatcttcatatttctcatctcatttaatgttttcttatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaaaa 15614364  T
Q  103 ntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttc 202  Q
     || |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||    
T  15614363 atg-atcatgactcatttgtttttcatgagccaatcataatggatcatgactcatttgaaatttactttccttcaaattaaatgtacacgtgacatcttc 15614265  T
Q  203 atatttttcctctcatttaatgtttt 228  Q
    |||||| || ||||||||||||||||    
T  15614264 atatttctcatctcatttaatgtttt 15614239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 15637452 - 15637225
Alignment:
Q  1 tgtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnn 100  Q
    |||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||        
T  15637452 tgtacatgtgacatcttaatatttctcatctcatttaatgttttcctatcatccaatgacaatggattttgacacatttattttatatcaaccaataaaa 15637353  T
Q  101 nnntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatct 200  Q
       ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||  |||||||| |||||    
T  15637352 aa-tggatcatgactcatttgtttttcatgagccaatcataatggatcatgactcatttgaaagttaccttccttcaaattaaatgtacacgtgtcatct 15637254  T
Q  201 tcatatttttcctctcatttaatgttttc 229  Q
    |||||||| || |||||||||||||||||    
T  15637253 tcatatttctcatctcatttaatgttttc 15637225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 15614282 - 15614055
Alignment:
Q  1 tgtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnn 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||        
T  15614282 tgtacacgtgacatcttcatatttctcatctcatttaatgtttttttatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaa 15614183  T
Q  101 nnntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatct 200  Q
         ||||||||| ||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||    
T  15614182 aaa--gatcatgacccatttgttttttatgagccaatcataatagatcatgactcatttgaaatttaccttccttcaaattaaaaatacacgtgatatct 15614085  T
Q  201 tcatat-ttttcctctcatttaatgttttc 229  Q
    |||||| ||||| |||||||||||||||||    
T  15614084 tcatattttttcatctcatttaatgttttc 15614055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 15605929 - 15605703
Alignment:
Q  1 tgtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnn 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||        
T  15605929 tgtacacgtgacatcttcatatttctcatctcatttaatgtttttttatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaa 15605830  T
Q  101 nnntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatct 200  Q
         ||||||||| ||||||||||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||    
T  15605829 aaa--gatcatgacccatttgttttttatgagccaattataatagatcatgactcatttgaaatttaccttccttcaaattaaaagtacacgtgatatct 15605732  T
Q  201 tcatatttttcctctcatttaatgttttc 229  Q
    |||||||| || |||||||||||||||||    
T  15605731 tcatatttctcatctcatttaatgttttc 15605703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15637269 - 15637048
Alignment:
Q  1 tgtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnn 100  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||        
T  15637269 tgtacacgtgtcatcttcatatttctcatctcatttaatgttttcttatcattcaatcagaatggattttgacacatttattttatatcaaccaataaaa 15637170  T
Q  101 nnntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatct 200  Q
       | || |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||  |||||||| |||||    
T  15637169 aaat-gaccatgactcatttgtttttcatgagccaatcataatagatcatgactcatttgaaatttatcttccttcaaattaaatgtacacgtgacatct 15637071  T
Q  201 tcatatttttcctctcatttaat 223  Q
    |||||||| || |||||||||||    
T  15637070 tcatatttctcatctcatttaat 15637048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 15637817 - 15637592
Alignment:
Q  4 acacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnn 103  Q
    |||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||           
T  15637817 acacgtgatatcttcatatttctcatctcatttaatgttttcttaacatccaatcagaatgaattttgacacatttattttatatcaaccaataaaaaaa 15637718  T
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatgga-tcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttc 202  Q
     |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||||     
T  15637717 -ggatcatgactcatttgtttttcatgagccaatcataatggagtcatgactcatttgaaatttactttccttcaaattaaatttacatgtgacatctta 15637619  T
Q  203 atatttttcctctcatttaatgttttc 229  Q
    |||||| || |||||||||||||||||    
T  15637618 atatttctcatctcatttaatgttttc 15637592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 15637634 - 15637408
Alignment:
Q  3 tacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnn 102  Q
    |||| |||||||||| |||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||          
T  15637634 tacatgtgacatcttaatatttctcatctcatttaatgttttcctatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaaag 15637535  T
Q  103 ntggatcatgactcatttgtttttaatgagccaatcaaaatgga-tcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatctt 201  Q
      |||||||||||||||||||||| |||| ||||||| |||||| |||||||||||||||||||||| |||||||||||||||  |||| ||| ||||||    
T  15637534 a-ggatcatgactcatttgtttttcatgatccaatcataatggagtcatgactcatttgaaatttactttccttcaaattaaatgtacatgtgacatctt 15637436  T
Q  202 catatttttcctctcatttaatgttttc 229  Q
     |||||| || |||||||||||||||||    
T  15637435 aatatttctcatctcatttaatgttttc 15637408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 15613949 - 15613737
Alignment:
Q  6 acgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntg 105  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||        |    
T  15613949 acgtgacatctacatatttctcatctcatttaatgttttcttatcatccaatcggaatggattttgacacatttattttatatcaaccaataaaaaaaag 15613850  T
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttcata 205  Q
     |||||||||||||||||||| |||||||||||||||||||           ||||||||||| |||||||||||||||| |||| ||| ||||||||||    
T  15613849 catcatgactcatttgtttttcatgagccaatcaaaatgga-----------ttgaaatttactttccttcaaattaaaagtacatgtgccatcttcata 15613761  T
Q  206 tttttcctctcatttaatgttttc 229  Q
    ||| || |||||||||||||||||    
T  15613760 tttctcatctcatttaatgttttc 15613737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 15637086 - 15636875
Alignment:
Q  1 tgtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnn 100  Q
    |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||        
T  15637086 tgtacacgtgacatcttcatatttctcatctcatttaat-ttttattatcatccaatcagaatggattttgacacatttattttatatcaaccaataaaa 15636988  T
Q  101 nnntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatct 200  Q
        |||||||||||||||||||||||||||| |||||||||||||           ||||||||||| |||||||||||||||| |||| ||| |||||    
T  15636987 aaa-ggatcatgactcatttgtttttaatgagtcaatcaaaatgga-----------ttgaaatttactttccttcaaattaaaagtacatgtgccatct 15636900  T
Q  201 tcatatttttcctctcatttaatgt 225  Q
    |||||||| || |||||||||||||    
T  15636899 tcatatttctcatctcatttaatgt 15636875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 15605596 - 15605384
Alignment:
Q  6 acgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntg 105  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||             
T  15605596 acgtgacatctacatatttctcatctcaattaatgttttcttatcatccaatcggaatggattttgacacatttattttatatcaaccaataaaaaaaaa 15605497  T
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttcata 205  Q
     |||||||||||||||||||| |||||||||||||||||||           ||||||||||| |||||||||||||||| |||| ||| ||||||||||    
T  15605496 catcatgactcatttgtttttcatgagccaatcaaaatgga-----------ttgaaatttactttccttcaaattaaaagtacatgtgccatcttcata 15605408  T
Q  206 tttttcctctcatttaatgttttc 229  Q
    ||| || |||||||||||||||||    
T  15605407 tttctcatctcatttaatgttttc 15605384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 15624308 - 15624094
Alignment:
Q  3 tacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnn 102  Q
    |||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||          
T  15624308 tacacgtggcatcttcatatttgtcctctcatttaatgttttcttatcatccaatcaaaatggattttgacacgtttattttatatcaaccaataaaaat 15624209  T
Q  103 ntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttc 202  Q
      ||||||||||||||||||||||||||||||||| ||||||||           ||||||||||| |||| ||||||||||| ||||   | |||||||    
T  15624208 a-ggatcatgactcatttgtttttaatgagccaattaaaatgga-----------ttgaaatttactttccatcaaattaaaactacatcagtcatcttc 15624121  T
Q  203 atatttttcctctcatttaatgttttc 229  Q
    |||||| || |||||||||||||||||    
T  15624120 atatttctcatctcatttaatgttttc 15624094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 15648096 - 15647882
Alignment:
Q  3 tacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnn 102  Q
    |||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||          
T  15648096 tacacgtggcatcttcatatttgtcctctcatttaatgttttcttatcatccaatcaaaatggattttggcacgtttattttatatcaaccaataaaaat 15647997  T
Q  103 ntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttc 202  Q
      ||||||||||||||||||||||||||||||||||||||||||           ||||||||||| |||| ||||||||||| ||||   | |||||||    
T  15647996 a-ggatcatgactcatttgtttttaatgagccaatcaaaatgga-----------ttgaaatttactttccatcaaattaaaactacatcagtcatcttc 15647909  T
Q  203 atatttttcctctcatttaatgttttc 229  Q
    |||||| || |||||||||||||||||    
T  15647908 atatttctcatctcatttaatgttttc 15647882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 15624573 - 15624449
Alignment:
Q  105 ggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttcat 204  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| |||||||||    
T  15624573 ggatcatgactcatttgttttttatgagccaatcataatggatcatgactcatttaaaatttaccttctttcaaattaaatttacacgtgacatcttcat 15624474  T
Q  205 atttttcctctcatttaatgttttc 229  Q
    |||| || |||||||||||||||||    
T  15624473 atttctcatctcatttaatgttttc 15624449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 10894517 - 10894670
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnn 101  Q
    |||||| || ||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||         
T  10894517 gtacacttggcatcttcatatttctcatatcatttaatgttttcttatcatccaatcaaaattgattatgacacatttattttatatcaaccaataaaaa 10894616  T
Q  102 nntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactca 156  Q
      | ||| || |||||||||||||| |||||||||||||||||||||||||||||    
T  10894617 aat-gattataactcatttgtttttcatgagccaatcaaaatggatcatgactca 10894670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 15605746 - 15605652
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaat 96  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15605746 gtacacgtgatatcttcatatttctcatctcatttaatgttttcttatcatccaatcagaatggattttgacacatttattttatatcaaccaat 15605652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 15648357 - 15648237
Alignment:
Q  109 catgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttcatattt 208  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||| || |||||||| |||||| || |||||||||||||    
T  15648357 catgactcatttgttttttatgagccaatcataatggatcatgactcatttaaaatttaccttcttttaaattaaatttacacctgacatcttcatattt 15648258  T
Q  209 ttcctctcatttaatgttttc 229  Q
     || |||||||||||||||||    
T  15648257 ctcatctcatttaatgttttc 15648237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 15614098 - 15614004
Alignment:
Q  3 tacacgtgacatcttcatatttctt-atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaat 96  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15614098 tacacgtgatatcttcatattttttcatctcatttaatgttttcttatcatccaatcagaatggattttgacacatttattttatatcaaccaat 15614004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 16250381 - 16250537
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnn 101  Q
    |||||| || |||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||         
T  16250381 gtacacttggcatcttcacattccctatctcatttaatgttttcttatcatccaatcaaaatagattatgacacatttgttttatatcaaccaatcaaaa 16250480  T
Q  102 nntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
       ||| ||||||||| || ||||| ||||||||||||||||||||||||||| |||||    
T  16250481 aa-ggagcatgactca-ttatttttcatgagccaatcaaaatggatcatgacttatttg 16250537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 15605427 - 15605343
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttat 86  Q
    ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15605427 gtacatgtgccatcttcatatttctcatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttat 15605343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 20540945 - 20540820
Alignment:
Q  13 atcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatg 112  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||        | |||||     
T  20540945 atcttcatatttcttatctcatttaacgtttttttatcctccaatcaaaatggattatgacacatttattttatatcaaccaataaaaaaa-gaatcata 20540847  T
Q  113 actcatttgtttttaatgagccaatca 139  Q
    |||||||||||||| ||||||||||||    
T  20540846 actcatttgtttttcatgagccaatca 20540820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 15613780 - 15613696
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttat 86  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  15613780 gtacatgtgccatcttcatatttctcatctcatttaatgttttcttatcatacaatcaaaacggattttgacacatttattttat 15613696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 15636914 - 15636830
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttat 86  Q
    ||||| ||| ||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||||    
T  15636914 gtacatgtgccatcttcatatttctcatctcatttaatgtatttttatcatccaatcaaaacggatttggacacatttattttat 15636830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 15923923 - 15923839
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttat 86  Q
    ||||| ||| ||||||||||||| | |||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  15923923 gtacatgtgccatcttcatatttatcatctcatttaatattttcttatcatccaatcaaaacagattttgacacatttattttat 15923839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 38050292 - 38050224
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaat 96  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  38050292 atctcatttaatattttcttatcatccaatcaaaatggattatgacacatttattttatatcatccaat 38050224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 15614008 - 15613910
Alignment:
Q  133 ccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattac--acgtggcatcttcatatttttcctctcatttaatgttttc 229  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||  |||  ||||| ||||| ||||||| || |||||||||||||||||    
T  15614008 ccaataaaaaaggatcatgactcatttgaaatttaccttccttcaaattaaatgtacatacgtgacatctacatatttctcatctcatttaatgttttc 15613910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 10895839 - 10895988
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnn 101  Q
    |||||| || |||||||| |||||| ||||||||||||||||| |||||| |||||||| ||||||  |||| |||||||||| ||| |  ||||         
T  10895839 gtacacatgccatcttcaaatttctcatctcatttaatgtttttttatcaaccaatcaatatggatcatgactcatttattttttattagtcaat--caa 10895936  T
Q  102 nntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgac 153  Q
      ||||||||||||||||| ||||| || ||||||||||||| |||||||||    
T  10895937 aatggatcatgactcatttatttttcattagccaatcaaaattgatcatgac 10895988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 15923991 - 15923880
Alignment:
Q  107 atcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattacacgtggcatcttcatat 206  Q
    |||||||||||||||||||| ||||||||||||||||||||           |||||||||| |||||||||||||||| |||| ||| |||||||||||    
T  15923991 atcatgactcatttgtttttcatgagccaatcaaaatggat-----------tgaaatttactttccttcaaattaaaagtacatgtgccatcttcatat 15923903  T
Q  207 ttttcctctcatttaatgttttc 229  Q
    || || ||||||||||| |||||    
T  15923902 ttatcatctcatttaatattttc 15923880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 15605649 - 15605557
Alignment:
Q  139 aaaatggatcatgactcatttgaaatttaccttccttcaaattaaaattac--acgtggcatcttcatatttttcctctcatttaatgttttc 229  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  |||  ||||| ||||| ||||||| || ||||| |||||||||||    
T  15605649 aaaaaggatcatgactcatttgaaatttaccttccttcaaattaaatgtacatacgtgacatctacatatttctcatctcaattaatgttttc 15605557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 160
Target Start/End: Original strand, 4930230 - 4930280
Alignment:
Q  110 atgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4930230 atgactcatttgtttttcatgagccaatcaaaatggatcatgactcatttg 4930280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 15613515 - 15613461
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  15613515 gatcatgactcatttttttttcatgagccaatcaaaatggatcatgacttatttg 15613461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 15647915 - 15647865
Alignment:
Q  12 catcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaa 62  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  15647915 catcttcatatttctcatctcatttaatgttttcttatcatccagtcaaaa 15647865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 287360 - 287413
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||||||||    
T  287360 gatcatgactcatttattttttattagccaatcaaaatggatcatgactcattt 287413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 10895900 - 10895955
Alignment:
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    ||||||||||||||||| ||||| || || ||||||||||||||||||||||||||    
T  10895900 tggatcatgactcatttattttttattagtcaatcaaaatggatcatgactcattt 10895955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 15624127 - 15624084
Alignment:
Q  12 catcttcatatttcttatctcatttaatgttttcttatcatcca 55  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  15624127 catcttcatatttctcatctcatttaatgttttcttatcatcca 15624084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 15605162 - 15605109
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  15605162 gatcatgactcattttttttta-tgagccaatcaaaatggatcatgacttatttg 15605109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 15606134 - 15606068
Alignment:
Q  163 atttaccttccttcaaattaaaattacacgtggcatcttcatatttttcctctcatttaatgttttc 229  Q
    ||||| ||||||||||||||||| |||| |||  |||||||||||| || |||||||||||||||||    
T  15606134 atttaacttccttcaaattaaaaatacatgtgatatcttcatatttctcatctcatttaatgttttc 15606068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 15614487 - 15614421
Alignment:
Q  163 atttaccttccttcaaattaaaattacacgtggcatcttcatatttttcctctcatttaatgttttc 229  Q
    ||||| ||||||||||||||||| |||| |||  |||||||||||| || |||||||||||||||||    
T  15614487 atttaacttccttcaaattaaaaatacatgtgatatcttcatatttctcatctcatttaatgttttc 15614421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 15637842 - 15637776
Alignment:
Q  163 atttaccttccttcaaattaaaattacacgtggcatcttcatatttttcctctcatttaatgttttc 229  Q
    ||||| |||||||||||||||||  |||||||  |||||||||||| || |||||||||||||||||    
T  15637842 atttaacttccttcaaattaaaagaacacgtgatatcttcatatttctcatctcatttaatgttttc 15637776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 23689301 - 23689219
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||| |||||||||||| |||  | ||||||||||||| |||||||||||||||||||| || ||| |||| |||| |||||    
T  23689301 gtacatgtgacatcttcacattcttcatctcatttaatgctttcttatcatccaatcaaattgaattatgactcattcatttt 23689219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 25113517 - 25113391
Alignment:
Q  29 tctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatgactcatttgtttttaa 128  Q
    |||||||||||||||| |||||||||||| ||||| |||| |||| || |||| | || | |||||||       | ||||||||||||||| ||||| |    
T  25113517 tctcatttaatgtttttttatcatccaattaaaatagattatgactcacttatat-attttaaccaatcaaaaaatagatcatgactcatttatttttca 25113419  T
Q  129 tgagccaatcaaaatggatcatgactca 156  Q
    | |||||||||||||| ||||| |||||    
T  25113418 ttagccaatcaaaatgaatcataactca 25113391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 287297 - 287446
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnn 101  Q
    |||||| || ||| |||| ||||||  |||||||||||  ||| | |||| ||||||||||| |||  |||| |||||||||| ||| | |||||         
T  287297 gtacacatggcattttcaaatttctcttctcatttaatactttttcatcaaccaatcaaaatagatcatgactcatttattttttattagccaatcaaaa 287396  T
Q  102 nntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgac 153  Q
      ||||||||||||||||| ||||| || ||||||||||||| |||||||||    
T  287397 --tggatcatgactcatttattttttattagccaatcaaaattgatcatgac 287446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 23136464 - 23136516
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    |||||||||||||||||||||||||||||| || ||| |||| ||||||||||    
T  23136464 catttaatgttttcttatcatccaatcaaattgaattatgactcatttatttt 23136516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 8362285 - 8362344
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaa 61  Q
    ||||| ||| |||||||| |||  | ||||||||||||||||||||||||||||||||||    
T  8362285 gtacatgtggcatcttcacattcttcatctcatttaatgttttcttatcatccaatcaaa 8362344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 15923658 - 15923603
Alignment:
Q  106 gatcatgactcatttgttttta-atgagccaatcaaaatggatcatgactcatttg 160  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||| |||||    
T  15923658 gatcatgactcattttttttttcatgagccaatcaaaatggatcatgacttatttg 15923603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 17895067 - 17895020
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgac 153  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  17895067 gatcatgactcatttattttttatgagccaatcaaaattgatcatgac 17895020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 35136703 - 35136758
Alignment:
Q  29 tctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||||||||||||||||||||||||||||||| || ||| |||| ||||| ||||    
T  35136703 tctcatttaatgttttcttatcatccaatcaaattgaattatgactcatttgtttt 35136758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 12167225 - 12167179
Alignment:
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatggatcat 150  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  12167225 tggatcatgactcatttatttttcatgagccaatcaaaattgatcat 12167179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 12411653 - 12411607
Alignment:
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatggatcat 150  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  12411653 tggatcatgactcatttatttttcatgagccaatcaaaattgatcat 12411607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 25063972 - 25064004
Alignment:
Q  29 tctcatttaatgttttcttatcatccaatcaaa 61  Q
    |||||||||||||||||||||||||||||||||    
T  25063972 tctcatttaatgttttcttatcatccaatcaaa 25064004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 45251120 - 45251064
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||||||||||| |||||||||||||||||||| || ||| |||| |||| |||||    
T  45251120 atctcatttaatgctttcttatcatccaatcaaattgaattatgactcattcatttt 45251064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 16291991 - 16292037
Alignment:
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatggatcat 150  Q
    ||||||||||||||||| ||||| ||||| |||||||||| ||||||    
T  16291991 tggatcatgactcatttatttttcatgagtcaatcaaaattgatcat 16292037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 18666771 - 18666853
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||| ||| |||||||| |||  | ||||||||||||| ||| |||||||||||||||| || ||| |||| |||| |||||    
T  18666771 gtacatgtggcatcttcacattcttcatctcatttaatgcttttttatcatccaatcaaattgaattatgactcattcatttt 18666853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 10894511 - 10894560
Alignment:
Q  180 ttaaaattacacgtggcatcttcatatttttcctctcatttaatgttttc 229  Q
    |||||| ||||| |||||||||||||||| || | |||||||||||||||    
T  10894511 ttaaaagtacacttggcatcttcatatttctcatatcatttaatgttttc 10894560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 15648439 - 15648382
Alignment:
Q  163 atttaccttccttcaaattaaaattacacgtggcatcttcatatttttcctctcattt 220  Q
    ||||| ||||||||||||||||| || || ||| |||||||||||| || ||||||||    
T  15648439 atttaacttccttcaaattaaaagtagacctggtatcttcatatttctcatctcattt 15648382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 23161139 - 23161087
Alignment:
Q  107 atcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    |||||||||||||| ||||| || || ||||||||||| |||||||| |||||    
T  23161139 atcatgactcatttcttttttattagtcaatcaaaatgaatcatgacacattt 23161087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 152
Target Start/End: Original strand, 30160475 - 30160598
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatgactcatttgttttta 127  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||     
T  30160475 atctcatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaaga-ggatcatgactcatttgtttttc 30160573  T
Q  128 atgagccaatcaaaatggatcatga 152  Q
    |||||||||||||||||||||||||    
T  30160574 atgagccaatcaaaatggatcatga 30160598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 5750752 - 5750593
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnn 101  Q
    ||||| |||||||||||| ||| |  ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |         
T  5750752 gtacatgtgacatcttcacattccccatctcatctaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccagtaaaaa 5750653  T
Q  102 nntggatcatgactcatttg-tttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
       |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  5750652 aaaggatgatgactcatttgctttttcatgagccaatcaaaatggatcatgactcatttg 5750593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 5787711 - 5787552
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnn 101  Q
    ||||| |||||||||||| ||| |  ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |         
T  5787711 gtacatgtgacatcttcacattccccatctcatctaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccagtaaaaa 5787612  T
Q  102 nntggatcatgactcatttg-tttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
       |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  5787611 aaaggatgatgactcatttgctttttcatgagccaatcaaaatggatcatgactcatttg 5787552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 152
Target Start/End: Complemental strand, 20795465 - 20795346
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatgactcatttgtttttaatga 131  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||| ||||    
T  20795465 catttaatgttttcatatcatccaatcaaaatggattatgacacatttattttatatcaaccaataaaaaga-ggatcatgactcatttgtttttcatga 20795367  T
Q  132 gccaatcaaaatggatcatga 152  Q
    ||||||||||||| |||||||    
T  20795366 gccaatcaaaatgaatcatga 20795346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 37197829 - 37197893
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaat 96  Q
    |||||||||||||||||||||||||||||| || ||| |||| |||||||||| ||| |||||||    
T  37197829 catttaatgttttcttatcatccaatcaaattgaattatgactcatttattttttattaaccaat 37197893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 2766170 - 2766111
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaa 61  Q
    ||||| ||||||||||||||||  | |||||||||||||||||||||||||| |||||||    
T  2766170 gtacatgtgacatcttcatattcttcatctcatttaatgttttcttatcatctaatcaaa 2766111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 6445211 - 6445164
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgac 153  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  6445211 gatcatgactcatttattttttatgagccaatcaaaattgatcatgac 6445164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 20919268 - 20919320
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||||||||||||||| |||||||||||| || ||| |||| ||||||||||    
T  20919268 catttaatgttttcttaccatccaatcaaattgaattatgactcatttatttt 20919320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 20928230 - 20928282
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||||||||||||||| |||||||||||| || ||| |||| ||||||||||    
T  20928230 catttaatgttttcttaccatccaatcaaattgaattatgactcatttatttt 20928282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 50246742 - 50246662
Alignment:
Q  4 acacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||||| |||||||| |||  | ||||||||||||| ||||||||| |||||||||| || ||| |||| |||| |||||    
T  50246742 acacgtggcatcttcacattcttcatctcatttaatgctttcttatcgtccaatcaaattgaattatgactcattcatttt 50246662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 37187514 - 37187561
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgac 153  Q
    ||||| ||||||||| ||||| |||||||||||||||| |||||||||    
T  37187514 gatcacgactcatttattttttatgagccaatcaaaattgatcatgac 37187561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 21992730 - 21992607
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatgactcatttgttttta 127  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||     
T  21992730 atctcatttaatgttttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaatcaaaaga-ggatcatgactcatttgtttttc 21992632  T
Q  128 atgagccaatcaaaatggatcatga 152  Q
     ||||||||||||||||||||||||    
T  21992631 ttgagccaatcaaaatggatcatga 21992607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 33452450 - 33452312
Alignment:
Q  21 atttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatgactcattt 120  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||        |||| ||||| |||||    
T  33452450 atttctcatctcatttaatgttttcttatcatccaatcaaaatgaattatgaaacatttattttatatcaaccaataaaaaaa-ggattatgacacattt 33452352  T
Q  121 gtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  33452351 gtttttcatgagccaatcaaaatggatcatgactcatttg 33452312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 160
Target Start/End: Complemental strand, 13705623 - 13705487
Alignment:
Q  21 atttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatgactcattt 120  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |  |||| |||||||||||||||||||||||        |||| ||||| |||||    
T  13705623 atttctcatctcatttaatgttttcttatcatccaatcaaaatgaa--ttgaaacatttattttatatcaaccaataaaaaaa-ggattatgacacattt 13705527  T
Q  121 gtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  13705526 gtttttcatgagccaatcaaaatggatcatgactcatttg 13705487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 15654058 - 15654152
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaat 96  Q
    |||||| |||||||||||||||| | ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15654058 gtacacatgacatcttcatatttatcatctcatttaatactttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaat 15654152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 15664011 - 15664105
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaat 96  Q
    |||||| |||||||||||||||| | ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15664011 gtacacatgacatcttcatatttatcatctcatttaatactttcttatcatccaatcaaaatggattatgacacatttattttatatcaaccaat 15664105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 4857034 - 4856970
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaat 96  Q
    |||||||||||||||||||||||||||||| || ||| |||| |||||||||| ||| |||||||    
T  4857034 catttaatgttttcttatcatccaatcaaattgaattatgactcatttattttttattaaccaat 4856970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 159
Target Start/End: Complemental strand, 30890176 - 30890047
Alignment:
Q  31 tcatttaatgttttctt-atcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatgactcatttgtttttaat 129  Q
    |||||||||||||| || |||||||||||||||| |||  |||| ||| ||||||  | ||||||||       | ||||||||||||||| ||||  ||    
T  30890176 tcatttaatgttttttttatcatccaatcaaaatagatcatgactcatatatttttcaacaaccaataaaaaaattgatcatgactcatttattttacat 30890077  T
Q  130 gagccaatcaaaatggatcatgactcattt 159  Q
    || ||||||||||| |||||||||||||||    
T  30890076 gatccaatcaaaattgatcatgactcattt 30890047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 15654035 - 15654095
Alignment:
Q  163 atttaccttccttcaaattaaaattacacgtggcatcttcatatttttcctctcatttaat 223  Q
    |||| |||||||||||||||||| ||||| || ||||||||||||| || |||||||||||    
T  15654035 attttccttccttcaaattaaaagtacacatgacatcttcatatttatcatctcatttaat 15654095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 27434710 - 27434766
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    |||||||||||||||||||||||||||||| ||| || ||| |||| ||||||||||    
T  27434710 atctcatttaatgttttcttatcatccaattaaattgaattatgactcatttatttt 27434766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 4749520 - 4749567
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgac 153  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  4749520 gatcatgactcatttattttttatgagccaatcaaaattgatcatgac 4749567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 159
Target Start/End: Original strand, 7823696 - 7823827
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttta-tatcaaccaatnnnnnnntggatcatgactcatttgttttt 126  Q
    ||||||||||||||||||| |||| |||||||   | |||| |||| ||||| ||||  |||||||||||       |||||||||||||||||| ||||    
T  7823696 atctcatttaatgttttct-atcaaccaatcattgtagattgtgactcatttttttttctatcaaccaatcatagaatggatcatgactcatttgctttt 7823794  T
Q  127 aatgagccaatcaaaatggatcatgactcattt 159  Q
     | || ||||||| ||| |||||||||||||||    
T  7823795 taagacccaatcagaattgatcatgactcattt 7823827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 15654194 - 15654249
Alignment:
Q  105 ggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
    |||||||||||||||||||||| |||  |||||||||||| | |||||||||||||    
T  15654194 ggatcatgactcatttgtttttcatgttccaatcaaaatgaaacatgactcatttg 15654249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 15664143 - 15664198
Alignment:
Q  105 ggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
    |||||||||||||||||||||| |||  |||||||||||| | |||||||||||||    
T  15664143 ggatcatgactcatttgtttttcatgttccaatcaaaatgaaacatgactcatttg 15664198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 15663995 - 15664048
Alignment:
Q  170 ttccttcaaattaaaattacacgtggcatcttcatatttttcctctcatttaat 223  Q
    |||||||||||||||| ||||| || ||||||||||||| || |||||||||||    
T  15663995 ttccttcaaattaaaagtacacatgacatcttcatatttatcatctcatttaat 15664048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 11550248 - 11550312
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaat 96  Q
    |||||||||||||||||||||||||| ||| |  ||| |||| |||||||||| ||| |||||||    
T  11550248 catttaatgttttcttatcatccaattaaattaaattatgactcatttattttttattaaccaat 11550312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 33010452 - 33010492
Alignment:
Q  4 acacgtgacatcttcatatttcttatctcatttaatgtttt 44  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  33010452 acacgtgacatcttcatattgctcatctcatttaatgtttt 33010492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 27434751 - 27434800
Alignment:
Q  110 atgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    ||||||||||| ||||| || |||||||||| ||||| ||||||||||||    
T  27434751 atgactcatttattttttattagccaatcaagatggaccatgactcattt 27434800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 1608101 - 1608073
Alignment:
Q  32 catttaatgttttcttatcatccaatcaa 60  Q
    |||||||||||||||||||||||||||||    
T  1608101 catttaatgttttcttatcatccaatcaa 1608073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 5e-40; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 501080 - 501228
Alignment:
Q  12 catcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcat 111  Q
    ||||||||||||||| || |||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||||| | ||        |||||||    
T  501080 catcttcatatttctcatatcatttaatactttcttatcatccaatcaaaattgattatgacacatttattttatatcaatcgataaaaaaaaggatcat 501179  T
Q  112 gactcatttgtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  501180 gactcatttgtttttcatgagccaatcaaaatagatcatgactcatttg 501228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 36647930 - 36648087
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnn 101  Q
    |||||||||| ||||||| ||||  |||||||||||||||||||||||| || ||||||||| |||| || ||| ||||||||||||||||||||         
T  36647930 gtacacgtgatatcttcacattttctatctcatttaatgttttcttatcttctaatcaaaatagattatgtcacgtttattttatatcaaccaataaaag 36648029  T
Q  102 nntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
       ||| || | ||||||||||||  |||| ||||||||||||||||||||||||||||    
T  36648030 aa-ggaccacggctcatttgttttacatgaaccaatcaaaatggatcatgactcatttg 36648087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 27588593 - 27588675
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||| ||| |||||||| |||  | |||||||||||| ||||||||||||||||||||| || ||| |||| ||||||||||    
T  27588593 gtacatgtggcatcttcacattcttcatctcatttaatattttcttatcatccaatcaaattgaattatgactcatttatttt 27588675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 9663135 - 9663083
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    |||||||||||||||||||||||||||||| || ||| |||| ||||||||||    
T  9663135 catttaatgttttcttatcatccaatcaaattgaattatgactcatttatttt 9663083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 19205947 - 19205901
Alignment:
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatggatcat 150  Q
    ||||||||||||||| | ||||| |||||||||||||||| ||||||    
T  19205947 tggatcatgactcatctatttttcatgagccaatcaaaattgatcat 19205901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 29857766 - 29857812
Alignment:
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatggatcat 150  Q
    ||||||||||||||||| ||||| ||||| |||||||||| ||||||    
T  29857766 tggatcatgactcatttatttttcatgagtcaatcaaaattgatcat 29857812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 34440 - 34283
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnn 101  Q
    |||||| || ||||||||||||||| || |||||||||| |||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||         
T  34440 gtacacttggcatcttcatatttctcatatcatttaatgctttcatatcatctaatcaaaattgattatgacacatttattttatatcaaccaataaaaa 34341  T
Q  102 nntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
       |||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||    
T  34340 aa-ggattatgacacatttgtttttcatgagccaatcaaaatggattatgactcatttg 34283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 9160 - 9279
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatgactcatttgtttttaatga 131  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||        |||||||||||||||| ||||| ||||    
T  9160 catttaatgttttcttatcatccaatcaaaatggattataacacatttattttatatcaaccaataaaaaga-ggatcatgactcatttatttttcatga 9258  T
Q  132 gccaatcaaaatggatcatga 152  Q
    |||||||||||||||||||||    
T  9259 gccaatcaaaatggatcatga 9279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 19095360 - 19095476
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatgactcatttgtttttaatga 131  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||| ||||    
T  19095360 catttaatgttttcttatcattcaataaaaatggattatgacacatttattttatatcaaccaataaaaaga-ggatcatgactcatttgtttttcatga 19095458  T
Q  132 gccaatcaaaatggatca 149  Q
    ||||||||||||||||||    
T  19095459 gccaatcaaaatggatca 19095476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 8314128 - 8314046
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    |||||| ||||||||||| ||||||| |||||||||||||||| |||||| ||||||||||| |||  |||| ||||||||||    
T  8314128 gtacacatgacatcttcaaatttcttttctcatttaatgtttttttatcaaccaatcaaaatagatcatgactcatttatttt 8314046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 22544307 - 22544225
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||| |||||||||||| |||  | ||||||||||||| |||||||||||||||||||| || ||| |||| |||| |||||    
T  22544307 gtacatgtgacatcttcacattcttcatctcatttaatgctttcttatcatccaatcaaattgaattatgactcattcatttt 22544225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 45914946 - 45914998
Alignment:
Q  9 tgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaa 61  Q
    ||||||||||| |||  | ||||||||||||||||||||||||||||||||||    
T  45914946 tgacatcttcacattcttcatctcatttaatgttttcttatcatccaatcaaa 45914998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 3417283 - 3417429
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnn 101  Q
    |||||| |||||||||||||||||  |||||||||||||  || |||||| ||||||||||||  | ||||| |||  ||||| ||| |  ||||         
T  3417283 gtacacatgacatcttcatatttcc-atctcatttaatgcatttttatcaaccaatcaaaatgtttattgactcatccattttctattagtcaatcaaaa 3417381  T
Q  102 nntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatg 151  Q
      ||||||||||||||||| ||||| || ||||||||||||| |||||||    
T  3417382 --tggatcatgactcatttatttttcatcagccaatcaaaattgatcatg 3417429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 15535378 - 15535296
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||| ||| |||||||| |||  | || ||||||||||||||||||||||||||||||| || ||| |||| |||| |||||    
T  15535378 gtacatgtggcatcttcacattcttcatttcatttaatgttttcttatcatccaatcaaattgaattatgactcattcatttt 15535296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 8106998 - 8106933
Alignment:
Q  31 tcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaat 96  Q
    |||||||||||||  |||||||||||||||||| |||| |||| ||| ||||||| | ||||||||    
T  8106998 tcatttaatgtttctttatcatccaatcaaaattgattatgactcatctattttacaacaaccaat 8106933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 8111644 - 8111579
Alignment:
Q  31 tcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaat 96  Q
    |||||||||||||  |||||||||||||||||| |||| |||| ||| ||||||| | ||||||||    
T  8111644 tcatttaatgtttctttatcatccaatcaaaattgattatgactcatctattttacaacaaccaat 8111579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 8314065 - 8314018
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgac 153  Q
    ||||||||||||||| ||||| || ||||||||||||| |||||||||    
T  8314065 gatcatgactcatttattttttattagccaatcaaaattgatcatgac 8314018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 11440855 - 11440910
Alignment:
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    |||||| | |||||||| ||||| || || ||||||||||||||||||||||||||    
T  11440855 tggatcttaactcatttattttttattagtcaatcaaaatggatcatgactcattt 11440910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 46514343 - 46514404
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaat 63  Q
    |||||| || |||||||  |||||| ||||||||||||||||| | |||| |||||||||||    
T  46514343 gtacacatggcatcttctaatttctcatctcatttaatgttttttcatcaaccaatcaaaat 46514404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 37069804 - 37069675
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatgactcatttgttttta 127  Q
    ||||||||||||||||||||||||||||||||||||| |  |||| |||||||||||||||||||||||        |||| ||||| |||||||||||     
T  37069804 atctcatttaatgttttcttatcatccaatcaaaatgaa--ttgaaacatttattttatatcaaccaataaaaaaa-ggattatgacacatttgtttttc 37069708  T
Q  128 atgagccaatcaaaatggatcatgactcatttg 160  Q
     ||||||||||||||||||||||||||||||||    
T  37069707 gtgagccaatcaaaatggatcatgactcatttg 37069675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 17462046 - 17461926
Alignment:
Q  27 tatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnnnntggatcatgactcatttgttttt 126  Q
    ||||||||||| |||||| |||||| |||||||||||||||| ||| |||||||||||||||||||||||         ||| ||||||||||||| |||    
T  17462046 tatctcatttagtgtttttttatcaaccaatcaaaatggattatgatacatttattttatatcaaccaataaaagaa--gattatgactcatttgtgttt 17461949  T
Q  127 aatgagccaatcaaaatggatca 149  Q
     |||| |||||||||||||||||    
T  17461948 tatgaaccaatcaaaatggatca 17461926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 160
Target Start/End: Complemental strand, 13923330 - 13923280
Alignment:
Q  110 atgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13923330 atgactcatttgtttttcatgagccaatcaaaatggatcatgactcatttg 13923280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 24223 - 24074
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaatnnnnn 101  Q
    |||||| || |||||||| ||||||  |||||||||||| ||| | |||| ||||||||||| |||  |||| |||||||||| ||| | |||||         
T  24223 gtacacatggcatcttcaaatttctcttctcatttaatgatttttcatcaaccaatcaaaatagatcatgactcatttattttttattagccaat--caa 24126  T
Q  102 nntggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgac 153  Q
      ||||| ||||||||||| ||||| || ||||||||||||| |||||||||    
T  24125 aatggataatgactcatttatttttcattagccaatcaaaattgatcatgac 24074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 24160 - 24107
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    ||||||||||||||| ||||| || ||||||||||||||||| |||||||||||    
T  24160 gatcatgactcatttattttttattagccaatcaaaatggataatgactcattt 24107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 18066847 - 18066791
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    |||||||||||||||||||||||||||||| ||| || ||| |||| ||||||||||    
T  18066847 atctcatttaatgttttcttatcatccaattaaattgaattatgactcatttatttt 18066791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Complemental strand, 14288190 - 14288144
Alignment:
Q  107 atcatgactcatttgtttttaatgagccaatcaaaatggatcatgac 153  Q
    |||||||||||||| ||||| || ||||||||||||| |||||||||    
T  14288190 atcatgactcatttatttttcattagccaatcaaaattgatcatgac 14288144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 18066806 - 18066757
Alignment:
Q  110 atgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    ||||||||||| ||||| || |||||||||| ||||| ||||||||||||    
T  18066806 atgactcatttattttttattagccaatcaagatggaccatgactcattt 18066757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 13914781 - 13914737
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcat 150  Q
    ||||||||||||||| ||||| || ||||||||||||| ||||||    
T  13914781 gatcatgactcatttattttttattagccaatcaaaattgatcat 13914737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 35647971 - 35648023
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    |||||||| ||||||||||||||||||||| || ||| ||||  |||||||||    
T  35647971 catttaatattttcttatcatccaatcaaattgaattatgacttatttatttt 35648023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 11127744 - 11127838
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttatatcaaccaat 96  Q
    ||||||||| ||||||||||||| | |||||||||||| |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  11127744 gtacacgtggcatcttcatatttttcatctcatttaatattttattatcaaccaatcaaaatggattatgacacatttattttatatcaaccaat 11127838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 11127721 - 11127786
Alignment:
Q  163 atttaccttccttcaaattaaaattacacgtggcatcttcatatttttcctctcatttaatgtttt 228  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  11127721 atttaccttccttcaaattgaaagtacacgtggcatcttcatatttttcatctcatttaatatttt 11127786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 20103506 - 20103562
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    |||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||    
T  20103506 atctcatttaatgttttcttatcatccaatcaaattgaattatgactcatttatttt 20103562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 45049532 - 45049585
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    |||||||||||||||  |||| || |||||||||||||||||||||||||||||    
T  45049532 gatcatgactcatttaatttttattagccaatcaaaatggatcatgactcattt 45049585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 5243305 - 5243259
Alignment:
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatggatcat 150  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  5243305 tggatcatgactcatttatttttcatgagccaatcaaaattgatcat 5243259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 21119852 - 21119910
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttattttat 86  Q
    ||||||||||||| |||||||||||||||||||| || ||| |||| |||| |||||||    
T  21119852 atctcatttaatgctttcttatcatccaatcaaattgaattatgactcattcattttat 21119910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 45049569 - 45049618
Alignment:
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgac 153  Q
    ||||||||||||||||| ||||| || ||||||||||||| |||||||||    
T  45049569 tggatcatgactcatttatttttcattagccaatcaaaattgatcatgac 45049618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 24972343 - 24972284
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaa 61  Q
    ||||| ||| |||||||| |||  | ||||||||||||| ||||||||||||||||||||    
T  24972343 gtacatgtggcatcttcacattcttcatctcatttaatgctttcttatcatccaatcaaa 24972284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 16311683 - 16311634
Alignment:
Q  110 atgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    ||||||||||| ||||| || ||  |||||||||||||||||||||||||    
T  16311683 atgactcatttattttttattagttaatcaaaatggatcatgactcattt 16311634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 41747366 - 41747418
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||||||||||| |||||||||||||||| || ||| ||||  |||||||||    
T  41747366 catttaatgttttattatcatccaatcaaattgaattatgacttatttatttt 41747418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 7946630 - 7946571
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaa 61  Q
    ||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  7946630 gtacatgtgacatcttcatattcttcatctcatttaatgttttcttatcatccaatcaaa 7946571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 29493982 - 29494038
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    |||| |||||||| |||||||||||||||||||| || ||| |||| |||| |||||    
T  29493982 atcttatttaatgctttcttatcatccaatcaaattgaattatgactcattcatttt 29494038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 30878820 - 30878876
Alignment:
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcatttg 160  Q
    |||| ||||||||| |||||||| |||| ||||||||||| |||||| | |||||||    
T  30878820 tggaccatgactcaattgtttttcatgatccaatcaaaatagatcatcattcatttg 30878876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 101135 - 101188
Alignment:
Q  106 gatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||||||||    
T  101135 gatcatgactcatttattttttattagccaatcaaaatggatcatgactcattt 101188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 52653 - 52597
Alignment:
Q  28 atctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    |||||||||||||||||||||||||||||| ||| || ||| |||| ||||||||||    
T  52653 atctcatttaatgttttcttatcatccaattaaattgaattatgactcatttatttt 52597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 52612 - 52563
Alignment:
Q  110 atgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    ||||||||||| ||||| || |||||||||| ||||| ||||||||||||    
T  52612 atgactcatttattttttattagccaatcaagatggaccatgactcattt 52563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 26639 - 26714
Alignment:
Q  3 tacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatt 78  Q
    |||| ||| |||||||| |||  | |||||||||||||||||||||||||||||||||| || ||| |||| ||||    
T  26639 tacatgtggcatcttcacattcttcatctcatttaatgttttcttatcatccaatcaaattgaattatgactcatt 26714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 67327 - 67272
Alignment:
Q  104 tggatcatgactcatttgtttttaatgagccaatcaaaatggatcatgactcattt 159  Q
    ||||||||||||||||| ||||| || ||| |||||||||||||||| ||||||||    
T  67327 tggatcatgactcatttattttttattagcaaatcaaaatggatcataactcattt 67272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 22264 - 22182
Alignment:
Q  2 gtacacgtgacatcttcatatttcttatctcatttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    |||||| ||||||||||  |||||| ||||||||||||| ||| | |||| |||||||||||  ||  |||| ||||||||||    
T  22264 gtacacatgacatcttctaatttctcatctcatttaatgctttttcatcaaccaatcaaaatatatcatgactcatttatttt 22182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 67302 - 67250
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||||||||||||||| ||| |||||||| || ||| |||| ||||||||||    
T  67302 catttaatgttttcttaccattcaatcaaattgaattatgactcatttatttt 67250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 75407 - 75355
Alignment:
Q  32 catttaatgttttcttatcatccaatcaaaatggattttgacacatttatttt 84  Q
    ||||||||||||||||| ||| |||||||| || ||| |||| ||||||||||    
T  75407 catttaatgttttcttaccattcaatcaaattgaattatgactcatttatttt 75355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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