View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1966_low_11 (Length: 387)

Name: NF1966_low_11
Description: NF1966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1966_low_11
NF1966_low_11
[»] chr4 (62 HSPs)
chr4 (63-194)||(52673605-52673736)
chr4 (63-192)||(22720513-22720642)
chr4 (58-165)||(41622128-41622235)
chr4 (63-190)||(52673604-52673731)
chr4 (58-190)||(22720512-22720644)
chr4 (58-192)||(22768146-22768280)
chr4 (63-191)||(49083047-49083170)
chr4 (51-167)||(41622092-41622208)
chr4 (85-192)||(22768148-22768255)
chr4 (62-154)||(15794769-15794862)
chr4 (123-195)||(52299079-52299150)
chr4 (137-192)||(2198052-2198107)
chr4 (63-191)||(49083049-49083172)
chr4 (134-192)||(22923663-22923721)
chr4 (134-192)||(22928316-22928374)
chr4 (134-192)||(22984595-22984653)
chr4 (134-192)||(22998183-22998241)
chr4 (63-192)||(44626166-44626293)
chr4 (65-164)||(15794796-15794896)
chr4 (137-192)||(35884356-35884411)
chr4 (137-192)||(35884410-35884465)
chr4 (132-183)||(52535968-52536019)
chr4 (58-192)||(3511711-3511845)
chr4 (58-196)||(5418515-5418653)
chr4 (45-191)||(44626151-44626295)
chr4 (58-115)||(2198050-2198107)
chr4 (67-176)||(4641486-4641595)
chr4 (58-115)||(6464881-6464938)
chr4 (76-189)||(6464886-6464999)
chr4 (58-119)||(22923661-22923722)
chr4 (58-119)||(22928314-22928375)
chr4 (58-119)||(22984593-22984654)
chr4 (58-119)||(22998181-22998242)
chr4 (125-185)||(6131441-6131501)
chr4 (87-163)||(21861082-21861157)
chr4 (87-163)||(21916945-21917020)
chr4 (159-195)||(46518523-46518559)
chr4 (97-168)||(15725515-15725586)
chr4 (135-186)||(24100773-24100824)
chr4 (135-186)||(24100887-24100938)
chr4 (146-201)||(28815873-28815928)
chr4 (51-141)||(17655320-17655410)
chr4 (67-201)||(54864079-54864213)
chr4 (138-179)||(2198118-2198159)
chr4 (146-191)||(2401045-2401090)
chr4 (82-167)||(2411873-2411958)
chr4 (126-167)||(21221191-21221232)
chr4 (110-187)||(23003971-23004048)
chr4 (126-167)||(31854412-31854453)
chr4 (135-192)||(35877322-35877379)
chr4 (131-167)||(2385228-2385264)
chr4 (58-130)||(5281201-5281273)
chr4 (131-167)||(5970312-5970348)
chr4 (59-115)||(6131433-6131489)
chr4 (131-167)||(20688495-20688531)
chr4 (135-183)||(23673435-23673483)
chr4 (131-167)||(32517803-32517839)
chr4 (51-115)||(35884347-35884411)
chr4 (58-118)||(39396823-39396883)
chr4 (133-185)||(39396832-39396884)
chr4 (134-182)||(44626475-44626523)
chr4 (69-117)||(50121454-50121502)
[»] chr1 (55 HSPs)
chr1 (63-190)||(8352142-8352269)
chr1 (67-191)||(8352140-8352264)
chr1 (65-201)||(43731128-43731264)
chr1 (57-185)||(14773724-14773852)
chr1 (67-189)||(14773730-14773852)
chr1 (50-181)||(26468288-26468419)
chr1 (63-182)||(31635752-31635871)
chr1 (112-183)||(30800192-30800263)
chr1 (67-185)||(43731130-43731248)
chr1 (69-168)||(8900822-8900921)
chr1 (106-185)||(50105671-50105750)
chr1 (136-192)||(5368854-5368910)
chr1 (88-168)||(25395946-25396025)
chr1 (134-194)||(26468296-26468356)
chr1 (58-142)||(42761455-42761539)
chr1 (55-197)||(31998188-31998330)
chr1 (98-183)||(14231088-14231173)
chr1 (58-95)||(39940587-39940624)
chr1 (127-194)||(1409051-1409119)
chr1 (135-183)||(1609977-1610025)
chr1 (146-202)||(6340660-6340716)
chr1 (70-194)||(31635747-31635871)
chr1 (134-182)||(37247586-37247634)
chr1 (65-149)||(50105669-50105753)
chr1 (77-116)||(30800289-30800328)
chr1 (124-183)||(49944850-49944909)
chr1 (87-165)||(897042-897120)
chr1 (82-172)||(1599057-1599147)
chr1 (58-192)||(3384227-3384361)
chr1 (87-165)||(10367842-10367920)
chr1 (136-202)||(30800289-30800355)
chr1 (58-192)||(31008261-31008395)
chr1 (134-168)||(35489225-35489259)
chr1 (63-133)||(39617315-39617385)
chr1 (87-165)||(51612942-51613020)
chr1 (82-167)||(2352339-2352424)
chr1 (120-189)||(3549843-3549912)
chr1 (82-167)||(14281620-14281705)
chr1 (63-116)||(30800186-30800239)
chr1 (82-167)||(33325363-33325448)
chr1 (161-194)||(36164064-36164097)
chr1 (85-186)||(46508154-46508255)
chr1 (134-183)||(49166686-49166735)
chr1 (127-183)||(8174166-8174222)
chr1 (58-182)||(8257957-8258081)
chr1 (58-130)||(13877051-13877123)
chr1 (152-192)||(14418153-14418193)
chr1 (51-203)||(18569693-18569845)
chr1 (131-167)||(23398159-23398195)
chr1 (135-183)||(24419612-24419660)
chr1 (85-121)||(25395947-25395983)
chr1 (131-167)||(26545076-26545112)
chr1 (57-93)||(39931145-39931181)
chr1 (152-192)||(42761457-42761497)
chr1 (63-191)||(48083509-48083637)
[»] chr8 (41 HSPs)
chr8 (51-205)||(6197817-6197971)
chr8 (58-192)||(6197828-6197962)
chr8 (58-192)||(43140548-43140683)
chr8 (58-167)||(11322591-11322699)
chr8 (77-190)||(13325116-13325225)
chr8 (67-175)||(13325116-13325220)
chr8 (61-192)||(27938996-27939127)
chr8 (63-189)||(27938998-27939124)
chr8 (115-179)||(158444-158508)
chr8 (99-185)||(28205809-28205895)
chr8 (51-192)||(43140550-43140692)
chr8 (55-194)||(36916582-36916721)
chr8 (65-167)||(1213965-1214067)
chr8 (51-185)||(11322558-11322690)
chr8 (62-189)||(2296481-2296608)
chr8 (87-157)||(325243-325313)
chr8 (58-192)||(24287789-24287923)
chr8 (129-190)||(27976799-27976860)
chr8 (129-190)||(28034068-28034129)
chr8 (85-185)||(1213965-1214065)
chr8 (65-197)||(2805812-2805944)
chr8 (85-165)||(20694448-20694528)
chr8 (131-183)||(43295080-43295132)
chr8 (64-191)||(5888341-5888468)
chr8 (55-130)||(37716073-37716148)
chr8 (87-189)||(42662713-42662816)
chr8 (110-192)||(43932107-43932189)
chr8 (134-185)||(44577193-44577244)
chr8 (63-197)||(34326244-34326378)
chr8 (147-181)||(37356622-37356656)
chr8 (125-167)||(41915667-41915709)
chr8 (137-182)||(429847-429892)
chr8 (67-196)||(13831879-13832008)
chr8 (85-154)||(38764395-38764464)
chr8 (82-167)||(43135074-43135159)
chr8 (131-167)||(2339369-2339405)
chr8 (131-167)||(11293220-11293256)
chr8 (131-183)||(20694432-20694484)
chr8 (63-155)||(27976767-27976859)
chr8 (63-155)||(28034036-28034128)
chr8 (131-167)||(40465271-40465307)
[»] chr6 (30 HSPs)
chr6 (50-192)||(7632764-7632906)
chr6 (67-192)||(26388202-26388327)
chr6 (62-196)||(14589543-14589677)
chr6 (51-185)||(14623196-14623330)
chr6 (76-185)||(29938627-29938735)
chr6 (62-194)||(14623203-14623335)
chr6 (67-185)||(14589554-14589672)
chr6 (64-190)||(33123017-33123143)
chr6 (67-185)||(33123022-33123140)
chr6 (58-186)||(26388201-26388329)
chr6 (70-185)||(3989524-3989639)
chr6 (63-167)||(29938623-29938726)
chr6 (64-182)||(3989524-3989642)
chr6 (58-185)||(7632781-7632908)
chr6 (82-164)||(6045717-6045799)
chr6 (134-183)||(24252959-24253008)
chr6 (146-195)||(32124214-32124263)
chr6 (82-170)||(6047826-6047914)
chr6 (130-182)||(14093095-14093147)
chr6 (58-198)||(26527192-26527332)
chr6 (136-183)||(5069953-5070000)
chr6 (131-170)||(6801581-6801620)
chr6 (139-192)||(2913341-2913394)
chr6 (127-192)||(2913408-2913473)
chr6 (70-135)||(14093095-14093160)
chr6 (82-167)||(24949664-24949749)
chr6 (131-167)||(885635-885671)
chr6 (131-167)||(7405523-7405559)
chr6 (131-167)||(17225276-17225312)
chr6 (131-167)||(31971063-31971099)
[»] chr7 (40 HSPs)
chr7 (51-191)||(4132381-4132522)
chr7 (68-185)||(41115562-41115679)
chr7 (65-191)||(38646175-38646302)
chr7 (67-192)||(4132390-4132516)
chr7 (137-198)||(26982762-26982823)
chr7 (65-190)||(41115556-41115681)
chr7 (58-196)||(23797348-23797486)
chr7 (137-190)||(43250420-43250473)
chr7 (56-192)||(9555260-9555396)
chr7 (132-192)||(21857073-21857133)
chr7 (50-118)||(21857164-21857232)
chr7 (63-202)||(38646160-38646300)
chr7 (63-115)||(43250420-43250472)
chr7 (58-118)||(21857071-21857131)
chr7 (63-115)||(26982771-26982823)
chr7 (147-191)||(43250374-43250418)
chr7 (56-133)||(30138851-30138928)
chr7 (63-192)||(43103076-43103205)
chr7 (63-104)||(43250376-43250417)
chr7 (132-192)||(21857162-21857222)
chr7 (63-115)||(45578018-45578070)
chr7 (107-190)||(2363076-2363158)
chr7 (50-189)||(8169104-8169242)
chr7 (63-190)||(37491280-37491407)
chr7 (58-196)||(2943212-2943350)
chr7 (127-185)||(8169167-8169225)
chr7 (87-165)||(15996147-15996225)
chr7 (134-192)||(21587839-21587897)
chr7 (146-192)||(34840618-34840664)
chr7 (137-198)||(24932385-24932446)
chr7 (137-190)||(45578017-45578070)
chr7 (63-143)||(2363078-2363157)
chr7 (131-167)||(7107709-7107745)
chr7 (131-183)||(12426547-12426599)
chr7 (131-167)||(12763308-12763344)
chr7 (132-168)||(17801458-17801494)
chr7 (131-167)||(20397894-20397930)
chr7 (110-190)||(21387630-21387710)
chr7 (131-167)||(29770401-29770437)
chr7 (60-192)||(38940224-38940355)
[»] chr5 (41 HSPs)
chr5 (67-190)||(21032538-21032661)
chr5 (58-192)||(42364222-42364356)
chr5 (87-192)||(5240230-5240335)
chr5 (58-194)||(29486500-29486636)
chr5 (51-192)||(26221028-26221169)
chr5 (58-182)||(26221026-26221150)
chr5 (56-185)||(7604199-7604329)
chr5 (58-192)||(42364224-42364358)
chr5 (60-185)||(29486502-29486627)
chr5 (63-186)||(21032539-21032662)
chr5 (67-142)||(6834041-6834120)
chr5 (60-185)||(3100416-3100541)
chr5 (58-165)||(5240228-5240335)
chr5 (58-192)||(7604190-7604325)
chr5 (50-192)||(1098622-1098763)
chr5 (56-183)||(28499795-28499921)
chr5 (65-184)||(892560-892679)
chr5 (77-182)||(12959965-12960072)
chr5 (55-142)||(31706013-31706100)
chr5 (63-185)||(892562-892684)
chr5 (137-190)||(6834036-6834089)
chr5 (58-185)||(1098639-1098765)
chr5 (87-198)||(2673845-2673956)
chr5 (50-121)||(14509896-14509967)
chr5 (135-198)||(20502089-20502152)
chr5 (131-170)||(21090406-21090445)
chr5 (87-165)||(13103432-13103509)
chr5 (136-202)||(28351024-28351090)
chr5 (87-169)||(28499813-28499895)
chr5 (58-197)||(35969127-35969267)
chr5 (82-167)||(1643374-1643459)
chr5 (82-167)||(37699813-37699898)
chr5 (135-183)||(7065664-7065712)
chr5 (131-167)||(7749997-7750033)
chr5 (131-167)||(7945916-7945952)
chr5 (131-167)||(9601626-9601662)
chr5 (134-170)||(14338897-14338933)
chr5 (85-169)||(22398072-22398156)
chr5 (148-192)||(30132850-30132894)
chr5 (58-142)||(38370441-38370525)
chr5 (131-167)||(41989643-41989679)
[»] chr3 (38 HSPs)
chr3 (51-194)||(50334923-50335065)
chr3 (67-198)||(50334932-50335062)
chr3 (63-167)||(35239682-35239786)
chr3 (84-185)||(29497371-29497472)
chr3 (85-194)||(35239682-35239791)
chr3 (58-167)||(29497362-29497471)
chr3 (87-189)||(48748536-48748640)
chr3 (58-190)||(53711863-53711994)
chr3 (58-196)||(12744903-12745041)
chr3 (63-189)||(53711868-53711993)
chr3 (58-159)||(32186891-32186992)
chr3 (67-119)||(17275365-17275417)
chr3 (107-154)||(26389443-26389490)
chr3 (50-192)||(27302087-27302229)
chr3 (82-167)||(8243715-8243800)
chr3 (58-119)||(42912375-42912432)
chr3 (93-192)||(32186893-32186992)
chr3 (82-167)||(6086934-6087019)
chr3 (82-167)||(9440161-9440246)
chr3 (82-167)||(10049698-10049783)
chr3 (127-192)||(39964299-39964364)
chr3 (126-175)||(42225587-42225636)
chr3 (152-185)||(42912352-42912385)
chr3 (131-167)||(335408-335444)
chr3 (131-167)||(379152-379188)
chr3 (131-167)||(9190107-9190143)
chr3 (131-167)||(9465104-9465140)
chr3 (131-167)||(23825228-23825264)
chr3 (98-194)||(24596893-24596989)
chr3 (131-167)||(26123069-26123105)
chr3 (131-167)||(26999100-26999136)
chr3 (131-167)||(29019814-29019850)
chr3 (146-194)||(29241570-29241618)
chr3 (60-100)||(32759062-32759102)
chr3 (58-114)||(36344518-36344574)
chr3 (83-167)||(40214933-40215017)
chr3 (87-167)||(48593175-48593255)
chr3 (131-167)||(49123023-49123059)
[»] chr2 (40 HSPs)
chr2 (58-157)||(8996792-8996891)
chr2 (58-185)||(8717509-8717638)
chr2 (98-192)||(8996795-8996889)
chr2 (67-192)||(13953776-13953902)
chr2 (67-192)||(14094983-14095109)
chr2 (65-196)||(43100749-43100874)
chr2 (58-165)||(8717540-8717647)
chr2 (55-192)||(42530491-42530628)
chr2 (82-167)||(45065613-45065698)
chr2 (51-119)||(10495721-10495789)
chr2 (87-162)||(25903722-25903797)
chr2 (106-165)||(39792145-39792204)
chr2 (134-192)||(10495722-10495780)
chr2 (58-196)||(15119777-15119915)
chr2 (58-191)||(1961311-1961444)
chr2 (128-185)||(8996734-8996791)
chr2 (55-189)||(2050089-2050223)
chr2 (82-167)||(6761495-6761580)
chr2 (63-192)||(23377949-23378078)
chr2 (62-190)||(4860245-4860372)
chr2 (58-118)||(8996725-8996785)
chr2 (87-155)||(39792136-39792204)
chr2 (124-183)||(20555275-20555334)
chr2 (124-190)||(20218614-20218680)
chr2 (82-167)||(16241300-16241385)
chr2 (82-167)||(20427031-20427116)
chr2 (58-167)||(20504245-20504354)
chr2 (58-191)||(41805276-41805409)
chr2 (51-92)||(45472405-45472446)
chr2 (131-167)||(1944567-1944603)
chr2 (131-167)||(2100096-2100132)
chr2 (131-167)||(7765827-7765863)
chr2 (70-205)||(7833277-7833412)
chr2 (131-167)||(11711357-11711393)
chr2 (131-167)||(20360523-20360559)
chr2 (135-183)||(29168579-29168627)
chr2 (131-167)||(32750375-32750411)
chr2 (87-119)||(33956363-33956395)
chr2 (135-183)||(36881550-36881598)
chr2 (131-167)||(43657958-43657994)
[»] scaffold0194 (1 HSPs)
scaffold0194 (126-165)||(20149-20188)
[»] scaffold0155 (1 HSPs)
scaffold0155 (152-195)||(33971-34014)
[»] scaffold0006 (1 HSPs)
scaffold0006 (58-184)||(36438-36565)
[»] scaffold2107 (1 HSPs)
scaffold2107 (131-167)||(522-558)
[»] scaffold0592 (1 HSPs)
scaffold0592 (131-167)||(458-494)
[»] scaffold0123 (1 HSPs)
scaffold0123 (131-167)||(29323-29359)
[»] scaffold0003 (1 HSPs)
scaffold0003 (99-183)||(320714-320798)


Alignment Details
Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 63 - 194
Target Start/End: Original strand, 52673605 - 52673736
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||||||||||  | |||||||| ||||||||||||||||||    
T  52673605 tcactattataagcaaaactttactttttagatatattgaataattaatgtatctagtttttattatagtatggatacattaattattcaatgtatctaa 52673704  T
Q  163 aaagttaagttttgcttataataatgaccgaa 194  Q
    ||||| || |||||||||||||| ||||||||    
T  52673705 aaagtgaaattttgcttataatagtgaccgaa 52673736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 63 - 192
Target Start/End: Original strand, 22720513 - 22720642
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    ||||||||||||  |||| |  |||||||||||| ||||||| ||||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||    
T  22720513 tcactattataaacaaaattccactttttagatacattgaataattaatgtatctagtctttattatagactgcatacattaattattcaatgtatctaa 22720612  T
Q  163 aaagttaagttttgcttataataatgaccg 192  Q
    |||||  |||||||||||||||| ||||||    
T  22720613 aaagtggagttttgcttataatagtgaccg 22720642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 58 - 165
Target Start/End: Complemental strand, 41622235 - 41622128
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||||||||  |||||| ||||| || |||||||||||| ||||||||||||||||||||| ||||||||||||||||  |||| | |||||||||||||    
T  41622235 tccgatcacagttataaataaaagttcactttttagatacattgaatgattaatgtatctagtctttattatagactacgtacactaattattcaatgta 41622136  T
Q  158 tctaaaaa 165  Q
    ||||||||    
T  41622135 tctaaaaa 41622128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 52673731 - 52673604
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    ||||||||||||| |||| || |||||||||||| ||||||| ||||||||||| |  || || || | |||||||||||| |||||||||| |||||||    
T  52673731 tcactattataagcaaaatttcactttttagatacattgaataattaatgtatccatactataataaaaactagatacattaattattcaatatatctaa 52673632  T
Q  163 aaagttaagttttgcttataataatgac 190  Q
    ||||| ||||||||||||||||| ||||    
T  52673631 aaagtaaagttttgcttataatagtgac 52673604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 22720644 - 22720512
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||||||||||| ||||||  |||||||||||| ||||||| ||||||||||  | ||| || || |||||||||||||| |||||||||||||    
T  22720644 tccggtcactattataagcaaaactccactttttagatacattgaataattaatgtatgcagtctataataaagactagatacattaattattcaatgta 22720545  T
Q  158 tctaaaaagttaagttttgcttataataatgac 190  Q
    ||||||||||  | ||||| |||||||| ||||    
T  22720544 tctaaaaagtggaattttgtttataatagtgac 22720512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 22768146 - 22768280
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||||||||||| ||||||  |  ||||||||| ||||||| ||||||||||||| |||||||||||||||  || |||| |||||||||||||    
T  22768146 tccggtcactattataagcaaaactccatattttagatacattgaataattaatgtatctagtctttattatagactgcattcattaattattcaatgta 22768245  T
Q  158 tctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||||||  ||| ||| ||||| || ||||||    
T  22768246 tctaaaaagtgtagtgttgtttatagtagtgaccg 22768280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 49083170 - 49083047
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    ||||||||||||| |||| || || ||||||||| ||| ||| ||||||||| ||||||||||||    |||||||||||| ||||||||||| ||||||    
T  49083170 tcactattataagcaaaatttcacattttagatacattaaataattaatgtaactaatctttatt----actagatacattaattattcaatgcatctaa 49083075  T
Q  163 aaagttaagttttgcttataataatgacc 191  Q
    ||| | ||||||||||||||||| |||||    
T  49083074 aaa-tgaagttttgcttataatagtgacc 49083047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 41622092 - 41622208
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattatt 150  Q
    |||| |||||||| |||||||||||||||| | || |||||||||| ||||||| |||| ||||  || ||| || || |||||||||||||| || |||    
T  41622092 tactccatccgattactattataagtaaaaatctattttttagatacattgaataattagtgtacgtagtctataataaagactagatacattaatcatt 41622191  T
Q  151 caatgtatctaaaaagt 167  Q
    |||||||||||||||||    
T  41622192 caatgtatctaaaaagt 41622208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 22768255 - 22768148
Alignment:
Q  85 actttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataat 184  Q
    |||||||||||| ||||||| ||||||| ||  | ||| || || |||||||||||||| ||||||||||||||||||||  |  |||||||||||||||    
T  22768255 actttttagatacattgaataattaatgaatgcagtctataataaagactagatacattaattattcaatgtatctaaaatatggagttttgcttataat 22768156  T
Q  185 aatgaccg 192  Q
    | ||||||    
T  22768155 agtgaccg 22768148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 15794769 - 15794862
Alignment:
Q  62 atcactattataagtaaaactttact-ttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaat 154  Q
    ||||||||||||||||||| || | | ||||||||| ||||||| ||||||||||||  |||||||||||||||| ||||||| ||| ||||||    
T  15794769 atcactattataagtaaaatttcattgttttagatacattgaataattaatgtatctggtctttattatagactaaatacattaattcttcaat 15794862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 52299150 - 52299079
Alignment:
Q  123 ttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccgaag 195  Q
    |||||||| |||| ||||||| |||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  52299150 ttattatacactaaatacattaattattcaatgtat-taaaaagtaaaattttgcttataataatgacggaag 52299079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 2198107 - 2198052
Alignment:
Q  137 atacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||| ||||||    
T  2198107 atacattaattattcaatgtatctaaaaagtggagttttgcttataatagtgaccg 2198052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 49083049 - 49083172
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    ||||||||||||| ||||||| | |||||||||  ||||||| ||||||||||||| |    | || ||| ||| |||||| |||||| |||||||||||    
T  49083049 tcactattataagcaaaacttca-tttttagatgcattgaataattaatgtatctagt----aataaagattagttacattaattatttaatgtatctaa 49083143  T
Q  163 aaagttaagttttgcttataataatgacc 191  Q
    || || || |||||||||||||| |||||    
T  49083144 aatgtgaaattttgcttataatagtgacc 49083172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 22923721 - 22923663
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||| ||||||||||||||||||||| |  |||||||||||||||| ||||||    
T  22923721 tagatacattaattattcaatgtatctaaaaattggagttttgcttataatagtgaccg 22923663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 22928374 - 22928316
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||| ||||||||||||||||||||| |  |||||||||||||||| ||||||    
T  22928374 tagatacattaattattcaatgtatctaaaaattggagttttgcttataatagtgaccg 22928316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 22984653 - 22984595
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||| ||||||||||||||||||||| |  |||||||||||||||| ||||||    
T  22984653 tagatacattaattattcaatgtatctaaaaattggagttttgcttataatagtgaccg 22984595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 22998241 - 22998183
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||| ||||||||||||||||||||| |  |||||||||||||||| ||||||    
T  22998241 tagatacattaattattcaatgtatctaaaaattggagttttgcttataatagtgaccg 22998183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 44626293 - 44626166
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    ||||||||||||||||||||| |||||| | ||||| ||||| |||||| | | |  | | || |||||||||||||||||  ||||||||||||||| |    
T  44626293 tcactattataagtaaaacttcacttttcaaatatactgaataattaattttt-tggt-tataatatagactagatacattagttattcaatgtatctga 44626196  T
Q  163 aaagttaagttttgcttataataatgaccg 192  Q
    ||| | || ||||| |||||||| ||||||    
T  44626195 aaaataaaattttgattataatagtgaccg 44626166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 65 - 164
Target Start/End: Complemental strand, 15794896 - 15794796
Alignment:
Q  65 actattataagtaaaactttactttttaga-tatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaa 163  Q
    ||||||||||  |||| |||| ||||| || |||||||||  |||||||||| || ||| || || |||| ||||||||| |||||||||||||||||||    
T  15794896 actattataaacaaaattttatttttttgaatatattgaagaattaatgtatttagtctataataaagaccagatacattaattattcaatgtatctaaa 15794797  T
Q  164 a 164  Q
    |    
T  15794796 a 15794796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 35884411 - 35884356
Alignment:
Q  137 atacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||||||||||||||||||||||||||| ||  |||| |||||||| ||||||    
T  35884411 atacattgattattcaatgtatctaaaaagtcaaagtttgtttataatagtgaccg 35884356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 35884410 - 35884465
Alignment:
Q  137 atacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||||||||||||||||||||||||||| ||  |||| |||||||| ||||||    
T  35884410 atacattgattattcaatgtatctaaaaagtcaaagtttgtttataatagtgaccg 35884465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 52536019 - 52535968
Alignment:
Q  132 actagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    |||||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  52536019 actagatacatacattattcaatgtatctaaaaagttaactttttcttataa 52535968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 3511711 - 3511845
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    ||||||||||| |||||| |||||||||| ||||||||  ||| ||| | | |||||| | ||||||||||||||| | || |||   ||| | |||  |    
T  3511711 tccgatcactaatataagcaaaactttacattttagattcattcaattaatgatgtatatgatctttattatagaccacattcatcatttaatgaataaa 3511810  T
Q  158 tctaaaaagttaagttttgcttataataatgaccg 192  Q
    | ||||| |  ||||||||||||||||||||||||    
T  3511811 tttaaaatgcaaagttttgcttataataatgaccg 3511845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 5418653 - 5418515
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    ||||||||||| |||||| |||| ||||||||||||||| ||||||| | | |||||| |  |||||||||||    | ||||||   | ||| ||||||    
T  5418653 tccgatcactaatataagcaaaaatttactttttagatacattgaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgta 5418554  T
Q  158 tctaaaaagttaagttttgcttataataatgaccgaagg 196  Q
    |||||||| || | ||||||| ||| || ||||||||||    
T  5418553 tctaaaaaattgatttttgctcatattagtgaccgaagg 5418515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 191
Target Start/End: Original strand, 44626151 - 44626295
Alignment:
Q  45 aaatggtacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattg 144  Q
    |||||||||| | |||| ||||||||||||  |||| |||| |||| ||||| ||||||| | ||||||||||| ||| ||||||| || | | | |||     
T  44626151 aaatggtactccctccggtcactattataatcaaaattttatttttcagatacattgaataactaatgtatctagtctatattata-acca-aaaaatta 44626248  T
Q  145 attattcaatgtatctaaaaagttaagttttgcttataataatgacc 191  Q
    |||||||| | ||| | |||||| ||||||| ||||||||| |||||    
T  44626249 attattcagtatatttgaaaagtgaagttttacttataatagtgacc 44626295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 2198050 - 2198107
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtat 115  Q
    |||| ||||||||||||| ||||||  |||||||||||| ||||||| ||||||||||    
T  2198050 tccggtcactattataagcaaaactccactttttagatacattgaataattaatgtat 2198107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 4641486 - 4641595
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||| |||| |||||| |||| || ||| ||||  ||||| |||||| |||||||||||||||| ||||||  |   || ||||||||||||||     
T  4641486 tattataagcaaaattttactctttacatgtatagaatagttaatctatctagtctttattatagactaaatacataaaccttttaatgtatctaaaaaa 4641585  T
Q  167 ttaagttttg 176  Q
    | ||||||||    
T  4641586 tgaagttttg 4641595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 6464881 - 6464938
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtat 115  Q
    |||||||| ||| |||||||||||||||||||| | ||| ||||||| ||||||||||    
T  6464881 tccgatcattatgataagtaaaactttacttttaaaatacattgaataattaatgtat 6464938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 6464999 - 6464886
Alignment:
Q  76 taaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagtttt 175  Q
    |||||||| |||||| | |||  |||||| ||||||||||||| |  ||||||||   |  ||||||| |||||||||||||| | |||||| |||||||    
T  6464999 taaaacttcacttttaaaataccttgaataattaatgtatctagttattattataacatgtatacattaattattcaatgtattttaaaagtaaagtttt 6464900  T
Q  176 gcttataataatga 189  Q
     ||||| |||||||    
T  6464899 acttatcataatga 6464886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 22923661 - 22923722
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaa 119  Q
    |||| ||||||||||||| ||||||  | |||||||||| ||||||| ||||||||||||||    
T  22923661 tccggtcactattataagcaaaactccaatttttagatacattgaataattaatgtatctaa 22923722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 22928314 - 22928375
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaa 119  Q
    |||| ||||||||||||| ||||||  | |||||||||| ||||||| ||||||||||||||    
T  22928314 tccggtcactattataagcaaaactccaatttttagatacattgaataattaatgtatctaa 22928375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 22984593 - 22984654
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaa 119  Q
    |||| ||||||||||||| ||||||  | |||||||||| ||||||| ||||||||||||||    
T  22984593 tccggtcactattataagcaaaactccaatttttagatacattgaataattaatgtatctaa 22984654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 22998181 - 22998242
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaa 119  Q
    |||| ||||||||||||| ||||||  | |||||||||| ||||||| ||||||||||||||    
T  22998181 tccggtcactattataagcaaaactccaatttttagatacattgaataattaatgtatctaa 22998242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 6131501 - 6131441
Alignment:
Q  125 attatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataata 185  Q
    ||||||||||| |||| || |||||| ||||||| |||||||| |||||||| ||||||||    
T  6131501 attatagactaaatacgttaattatttaatgtatttaaaaagtaaagttttgattataata 6131441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 21861082 - 21861157
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaa 163  Q
    |||||||||| ||||||| |||||||||||| | ||||  ||||||| ||||||||| |||||| |||| |||||||    
T  21861082 tttttagatacattgaataattaatgtatctga-cttttatatagaccagatacattaattatttaatgaatctaaa 21861157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 21916945 - 21917020
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaa 163  Q
    |||||||||| ||||||| |||||||||||| | ||||  ||||||| ||||||||| |||||| |||| |||||||    
T  21916945 tttttagatacattgaataattaatgtatctga-cttttatatagaccagatacattaattatttaatgaatctaaa 21917020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 46518523 - 46518559
Alignment:
Q  159 ctaaaaagttaagttttgcttataataatgaccgaag 195  Q
    |||||||||||| ||||||||||||||||||||||||    
T  46518523 ctaaaaagttaatttttgcttataataatgaccgaag 46518559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 15725515 - 15725586
Alignment:
Q  97 tattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagtt 168  Q
    |||||||| | ||||||||| |||| | ||||||||||||||||||   ||||||||| || ||||||||||    
T  15725515 tattgaataactaatgtatccaatcataattatagactagatacatgagttattcaatatacctaaaaagtt 15725586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 24100824 - 24100773
Alignment:
Q  135 agatacattgattattcaatgtatctaaaaagttaagttttgcttataataa 186  Q
    ||||||||| ||||||||||| |||||||||||||| | || ||||||||||    
T  24100824 agatacattaattattcaatgaatctaaaaagttaattatttcttataataa 24100773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 24100887 - 24100938
Alignment:
Q  135 agatacattgattattcaatgtatctaaaaagttaagttttgcttataataa 186  Q
    ||||||||| ||||||||||| |||||||||||||| | || ||||||||||    
T  24100887 agatacattaattattcaatgaatctaaaaagttaattatttcttataataa 24100938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 28815873 - 28815928
Alignment:
Q  146 ttattcaatgtatctaaaaagttaagttttgcttataataatgaccgaaggaaata 201  Q
    ||||| |||| | ||||||||| || |||||||||||||| |||||||||||||||    
T  28815873 ttattaaatgaacctaaaaagtcaacttttgcttataatagtgaccgaaggaaata 28815928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 141
Target Start/End: Complemental strand, 17655410 - 17655320
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagataca 141  Q
    |||| |||||||| |||||||||| | |||  | ||||||||| | |||||||| |  |||||||||  ||| ||||||||||||||||||    
T  17655410 tactccatccgattactattataaattaaaaatgactttttaggtttattgaataaccaatgtatctggtctatattatagactagataca 17655320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 201
Target Start/End: Original strand, 54864079 - 54864213
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||| |||| || ||||||||| |  || |||| |||||||||||| ||  | | ||||||||||||||||   |||| ||||| | | ||||||    
T  54864079 tattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttatacaatgaaccaaaaaag 54864178  T
Q  167 ttaagttttgcttataataatgaccgaaggaaata 201  Q
    |||| | || |||||||||| ||||| ||| ||||    
T  54864179 ttaattgtttcttataataaggaccggagggaata 54864213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 2198118 - 2198159
Alignment:
Q  138 tacattgattattcaatgtatctaaaaagttaagttttgctt 179  Q
    |||||| |||||||||||||| |||||||| |||||||||||    
T  2198118 tacattaattattcaatgtatttaaaaagtgaagttttgctt 2198159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 2401090 - 2401045
Alignment:
Q  146 ttattcaatgtatctaaaaagttaagttttgcttataataatgacc 191  Q
    ||||| |||| || ||||||||||| ||||||||||||||||||||    
T  2401090 ttattgaatgaatttaaaaagttaacttttgcttataataatgacc 2401045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 2411958 - 2411873
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||| ||| ||| |||||| || | |  ||| | ||||||||||||  |||||||||||||| ||||||||    
T  2411958 tttactttttagatacattaaataatttatgtatttagtttagattcttgactagatacatacattattcaatgtatttaaaaagt 2411873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 21221191 - 21221232
Alignment:
Q  126 ttatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    |||| ||||||||||||  |||||||||||||||||||||||    
T  21221191 ttattgactagatacatatattattcaatgtatctaaaaagt 21221232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 23004048 - 23003971
Alignment:
Q  110 atgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataat 187  Q
    |||||| | ||||||||||||||||| |||||||  ||| | || | |||||||| ||||| ||||||||||| ||||    
T  23004048 atgtatatgatctttattatagactacatacattatttaatgaacgaatctaaaatgttaatttttgcttatagtaat 23003971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 31854453 - 31854412
Alignment:
Q  126 ttatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    |||| ||||||||||||  |||||||||||||||||||||||    
T  31854453 ttattgactagatacatacattattcaatgtatctaaaaagt 31854412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 35877379 - 35877322
Alignment:
Q  135 agatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||||| ||||||| ||| ||||||||||| || |||| |||||||||| |||||    
T  35877379 agatacattaattattctatgaatctaaaaagtcaactttttcttataataaggaccg 35877322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 2385264 - 2385228
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  2385264 gactagatacatacattattcaatgtatctaaaaagt 2385228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 5281273 - 5281201
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattata 130  Q
    |||| |||||| ||||||||||| || |||||||||||| ||| ||| | | |||||| | ||||||||||||    
T  5281273 tccggtcactaatataagtaaaaattcactttttagatacattcaattaatgatgtatgtgatctttattata 5281201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 5970348 - 5970312
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  5970348 gactagatacatacattattcaatgtatctaaaaagt 5970312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 6131433 - 6131489
Alignment:
Q  59 ccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtat 115  Q
    ||||||||||||||||  |||||||||||||||| ||| ||| ||| ||||| ||||    
T  6131433 ccgatcactattataatcaaaactttactttttaaatacattaaataattaacgtat 6131489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 20688495 - 20688531
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  20688495 gactagatacatacattattcaatgtatctaaaaagt 20688531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 23673435 - 23673483
Alignment:
Q  135 agatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    ||||||||| |||||||||| || |||||||||||  ||||||||||||    
T  23673435 agatacattaattattcaatatacctaaaaagttattttttgcttataa 23673483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 32517839 - 32517803
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  32517839 gactagatacatatattattcaatgtatctaaaaagt 32517803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 35884347 - 35884411
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtat 115  Q
    ||||||||||| ||||||||||||  |||  || |||||||||||| ||||||| || |||||||    
T  35884347 tacttcatccggtcactattataaacaaactttgactttttagatacattgaataatcaatgtat 35884411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 39396823 - 39396883
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatcta 118  Q
    |||||||||||||||||  ||||||| |||||||| ||| || | || |||||||||||||    
T  39396823 tccgatcactattataaacaaaacttcactttttaaatacatgggataattaatgtatcta 39396883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 39396884 - 39396832
Alignment:
Q  133 ctagatacattgattattcaatgtatctaaaaagttaagttttgcttataata 185  Q
    ||||||||||| ||||| | |||||| |||||||| |||||||| ||||||||    
T  39396884 ctagatacattaattatcccatgtatttaaaaagtgaagttttgtttataata 39396832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 44626475 - 44626523
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttata 182  Q
    ||||||||||||||||||||| ||| |||||||| |  |||||||||||    
T  44626475 tagatacattgattattcaatatatttaaaaagtcattttttgcttata 44626523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 50121454 - 50121502
Alignment:
Q  69 ttataagtaaaactttactttttagatatattgaatgattaatgtatct 117  Q
    ||||||| |||| || ||||||||||| |||||||||||| ||||||||    
T  50121454 ttataagaaaaatttgactttttagatttattgaatgattgatgtatct 50121502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 8e-40; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 8352142 - 8352269
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    ||||||||||||| ||||||| | |||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||| |||||||||| |||||||    
T  8352142 tcactattataagcaaaacttcattttttagatacattgaatgattaatgtatctaatatttattatagaataaatacattaattattcaatatatctaa 8352241  T
Q  163 aaagttaagttttgcttataataatgac 190  Q
    ||||  ||||||||||||||||||||||    
T  8352242 aaagggaagttttgcttataataatgac 8352269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 8352264 - 8352140
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||| |||||||  ||||||||||||||||||| |||||||||| || ||| || || | | |||||||||| || ||||||||||||||||||     
T  8352264 tattataagcaaaacttccctttttagatatattgaataattaatgtatttattctataataaatattagatacattaatcattcaatgtatctaaaaaa 8352165  T
Q  167 ttaagttttgcttataataatgacc 191  Q
    | ||||||||||||||||| |||||    
T  8352164 tgaagttttgcttataatagtgacc 8352140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 201
Target Start/End: Original strand, 43731128 - 43731264
Alignment:
Q  65 actattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaa 164  Q
    ||||||||||| |||| ||||| | | ||||| ||| ||| ||||||||||||| | ||||||| | | |||||||||| | ||||||||||||||||||    
T  43731128 actattataagcaaaaatttacatgtaagatacattcaataattaatgtatctagtttttattaaaaaatagatacattaactattcaatgtatctaaaa 43731227  T
Q  165 agttaagttttgcttataataatgaccgaaggaaata 201  Q
    | | || |||||||||||||||| ||||||| |||||    
T  43731228 aatgaaattttgcttataataataaccgaagaaaata 43731264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 185
Target Start/End: Original strand, 14773724 - 14773852
Alignment:
Q  57 atccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgt 156  Q
    ||||||||| |||||||   |||| |||| |||||  ||||||||||| |||| |||||| | ||| || || |||||||||||||| ||||| |||| |    
T  14773724 atccgatcattattatagacaaaattttattttttgaatatattgaataattattgtatccagtctataatacagactagatacattaattatacaatat 14773823  T
Q  157 atctaaaaagttaagttttgcttataata 185  Q
    |||||||||||||| ||||||||||||||    
T  14773824 atctaaaaagttaaattttgcttataata 14773852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 189
Target Start/End: Complemental strand, 14773852 - 14773730
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||| |||| || ||||||||||||||||| || ||||||||||||| ||| ||||||||||| |||||| | |||||||||| |||  |||||     
T  14773852 tattataagcaaaatttaactttttagatatattgtataattaatgtatctagtctgtattatagactggatacaataattattcaatatattcaaaaaa 14773753  T
Q  167 ttaagttttgcttataataatga 189  Q
    | || |||||  |||||||||||    
T  14773752 taaaattttgtctataataatga 14773730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 181
Target Start/End: Original strand, 26468288 - 26468419
Alignment:
Q  50 gtacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattat 149  Q
    ||||| ||| || ||||||||||||  |||| || |||||||| ||| ||||||| ||||||||||||||| |||||||||||| | ||| ||  |||||    
T  26468288 gtactccattcggtcactattataaacaaaatttcactttttaaatacattgaataattaatgtatctaatttttattatagaccatatatatcaattat 26468387  T
Q  150 tcaatgtatctaaaaagttaagttttgcttat 181  Q
    |||||||||  ||||||| || |||| |||||    
T  26468388 tcaatgtataaaaaaagtgaaattttacttat 26468419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 31635752 - 31635871
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    |||| |||| ||||||||||| |||||||| ||| ||||||| || |||||||    |  ||||||||||||||||| |||  |||||||||||||||||    
T  31635752 tcaccattacaagtaaaacttcactttttatatacattgaataataaatgtattcggtgcttattatagactagatatattagttattcaatgtatctaa 31635851  T
Q  163 aaagttaagttttgcttata 182  Q
    ||||| || |||||||||||    
T  31635852 aaagtgaaattttgcttata 31635871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 30800263 - 30800192
Alignment:
Q  112 gtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| || ||||| ||||||    
T  30800263 gtatctaatctttattatagactggatacattaatcattcaatgtatctagaaagtaaaattttgtttataa 30800192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 43731248 - 43731130
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||| |||| || | |||||||||| |||||||  |||||||||||| | |||| || | |||||||||||| |||||| ||||||||| | | |    
T  43731248 tattataagcaaaatttcattttttagatacattgaatagttaatgtatctattttttaataaaaactagatacattaattattgaatgtatcttacatg 43731149  T
Q  167 ttaagttttgcttataata 185  Q
    | || ||||||||||||||    
T  43731148 taaatttttgcttataata 43731130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 168
Target Start/End: Complemental strand, 8900921 - 8900822
Alignment:
Q  69 ttataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagtt 168  Q
    ||||||||||||  ||||||||||| |||||||||| |||||||||||   ||    ||||||  |||||||||| ||||||||||||| ||||||||||    
T  8900921 ttataagtaaaaaattactttttaggtatattgaataattaatgtatccggtcacatttataggttagatacattaattattcaatgtacctaaaaagtt 8900822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 50105750 - 50105671
Alignment:
Q  106 attaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataata 185  Q
    ||||||||||||| | | |||||||||  ||||||||||||||||||||| ||||||||| |||| |||| ||| |||||    
T  50105750 attaatgtatctagtttatattatagatcagatacattgattattcaatgaatctaaaaaattaatttttacttttaata 50105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 5368854 - 5368910
Alignment:
Q  136 gatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||||||  |||||||    
T  5368854 gatacattaattattcaatgcatctaaaaagttaatttttgcttataaatatgaccg 5368910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 25396025 - 25395946
Alignment:
Q  88 ttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagtt 168  Q
    |||||| |||||||| | |||||||||||| | ||| | ||| || |||||||||| ||||||||||||||||||||||||    
T  25396025 ttttaggtatattgagtcattaatgtatctgaccttaaatat-gattagatacattaattattcaatgtatctaaaaagtt 25395946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 26468356 - 26468296
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccgaa 194  Q
    |||||||||| |||||||||||||| |||||||| || ||||| |||||||| ||||||||    
T  26468356 tagatacattaattattcaatgtatttaaaaagtgaaattttgtttataatagtgaccgaa 26468296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 42761455 - 42761539
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacat 142  Q
    |||| ||| ||||||||| |||||||||| ||||||||  ||| ||| | | |||||||| ||||||||||||||||| ||||||    
T  42761455 tccggtcattattataagcaaaactttacattttagattcattcaattaatgatgtatctgatctttattatagactatatacat 42761539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 31998330 - 31998188
Alignment:
Q  55 tcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaat 154  Q
    ||||||||||||||||||||| |||||||| | ||||||||  ||| | | | | |||||| | ||||||||||||||  | ||||||   ||| | |||    
T  31998330 tcatccgatcactattataagcaaaactttgcattttagattcattcatttaatgatgtatatgatctttattatagatcacatacatcatttaataaat 31998231  T
Q  155 gtatctaaaaagttaagttttgcttataataatgaccgaagga 197  Q
    | || |||||    ||||||||||||||||| |||||||||||    
T  31998230 gaatataaaatacaaagttttgcttataatagtgaccgaagga 31998188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 183
Target Start/End: Original strand, 14231088 - 14231173
Alignment:
Q  98 attgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    |||||||||||||||||| |||||   ||||||||| |||||||||  |||||||||| | |||||| |||  ||||| |||||||    
T  14231088 attgaatgattaatgtatttaatcacaattatagaccagatacattagttattcaatgaacctaaaatgttgtgttttccttataa 14231173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 39940624 - 39940587
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagat 95  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  39940624 tccgatcactattataagtaaaaatttactttttagat 39940587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 194
Target Start/End: Complemental strand, 1409119 - 1409051
Alignment:
Q  127 tatagactagatacattgattattcaa-tgtatctaaaaagttaagttttgcttataataatgaccgaa 194  Q
    |||||||||||||||||  ||||| || || ||||||||||| || |||||||||||||| ||||||||    
T  1409119 tatagactagatacattatttatttaaatgaatctaaaaagtgaacttttgcttataatagtgaccgaa 1409051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 1610025 - 1609977
Alignment:
Q  135 agatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    ||||||||| ||||||||||||||||||||||||   ||||||||||||    
T  1610025 agatacattaattattcaatgtatctaaaaagttgttttttgcttataa 1609977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 6340660 - 6340716
Alignment:
Q  146 ttattcaatgtatctaaaaagttaagttttgcttataataatgaccgaaggaaatac 202  Q
    ||||| |||| | |||||||||||| ||||||||||||||||||| | |||||||||    
T  6340660 ttattgaatgaacctaaaaagttaatttttgcttataataatgacaggaggaaatac 6340716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 31635871 - 31635747
Alignment:
Q  70 tataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagtta 169  Q
    |||||| |||| || |||||||||||| ||||||| | |||| |||||| ||| || ||   ||   ||||||| |||||||||||||| |||||||| |    
T  31635871 tataagcaaaatttcactttttagatacattgaataactaatatatctagtctataataagcaccgaatacatttattattcaatgtatataaaaagtga 31635772  T
Q  170 agttttgcttataataatgaccgaa 194  Q
    |||||| ||| ||||  ||||||||    
T  31635771 agttttacttgtaatggtgaccgaa 31635747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 37247634 - 37247586
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttata 182  Q
    |||||||||| ||||||||||||||||||||| |||  |||||||||||    
T  37247634 tagatacattaattattcaatgtatctaaaaatttattttttgcttata 37247586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 50105669 - 50105753
Alignment:
Q  65 actattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattat 149  Q
    ||||||| |||||||| || | |||||||||  ||||||| || ||||||||| |||| || |||| |||||||||||| |||||    
T  50105669 actattaaaagtaaaaattaattttttagattcattgaataatcaatgtatctgatctataatataaactagatacattaattat 50105753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 30800328 - 30800289
Alignment:
Q  77 aaaactttactttttagatatattgaatgattaatgtatc 116  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  30800328 aaaactctactttttagatatattgaataattaatgtatc 30800289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 49944909 - 49944850
Alignment:
Q  124 tattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    |||| ||||| ||||||||  ||||||||||| |||||||||||||| |||| |||||||    
T  49944909 tattctagacaagatacatcaattattcaatgaatctaaaaagttaaatttttcttataa 49944850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 897042 - 897120
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaa 165  Q
    |||||||||| ||| ||| |||||||||| || |||| ||| || |   |||||||| |||||||||||||||||||||    
T  897042 tttttagatacatttaataattaatgtatttagtcttcattgtaaatgggatacattaattattcaatgtatctaaaaa 897120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 1599057 - 1599147
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagt 172  Q
    |||| |||||||||  ||| |||||||||||||||| || | |||||||||||| |||||||  ||||| ||   ||||||||||| ||||    
T  1599057 tttattttttagattcattaaatgattaatgtatctgatatatattatagactaaatacattagttatttaaaaaatctaaaaagtgaagt 1599147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 3384361 - 3384227
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| |||||| ||||| ||||| || |||||||||||| ||| |||   | |||||| | ||||||||||||    | ||||||   | ||| ||||||    
T  3384361 tccggtcactaatataaataaaaattcactttttagatacattcaattgatgatgtatgtgatctttattatatgtcacatacatcattaattgaatgta 3384262  T
Q  158 tctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||| || ||||||||||| |||||||||    
T  3384261 tctaaaaagtgaatttttgcttatattaatgaccg 3384227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 10367920 - 10367842
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaa 165  Q
    |||| |||||||||| || ||| |||||||||||||  ||| ||||||  ||||||  |||||||||| ||||||||||    
T  10367920 ttttcagatatattgtataatttatgtatctaatctaaattttagactgaatacataaattattcaatatatctaaaaa 10367842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 30800289 - 30800355
Alignment:
Q  136 gatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccgaaggaaatac 202  Q
    |||||||| |||||||||| ||||||||||||  ||||||| |||||| |||||   ||||||||||    
T  30800289 gatacattaattattcaatatatctaaaaagtagagttttgtttataacaatgatacaaggaaatac 30800355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 31008261 - 31008395
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| |||||| |||||| |||| | ||||||||||||| ||| ||| | | |||||| |  |||||||||||   || ||||||   | ||| ||||||    
T  31008261 tccggtcactaatataagcaaaaatctactttttagatacatttaattaatgatgtatgtggtctttattatatgttacatacatcattaattgaatgta 31008360  T
Q  158 tctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||||||  | ||||||||||| |||||||||    
T  31008361 tctaaaaagtggatttttgcttatattaatgaccg 31008395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 35489259 - 35489225
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagtt 168  Q
    |||||||||| ||||||||||||||||||||||||    
T  35489259 tagatacattaattattcaatgtatctaaaaagtt 35489225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 39617315 - 39617385
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagac 133  Q
    ||||||||||||||||||   |||||||||||| |||||||||| | |||||| | ||| ||| |||||||    
T  39617315 tcactattataagtaaaaaactactttttagatttattgaatgagtgatgtatgtgatcattaatatagac 39617385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 51612942 - 51613020
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaa 165  Q
    |||||||||| ||| ||| |||||||||||   ||||| || || | |||||| ||| |||||||||||||||||||||    
T  51612942 tttttagatacattcaataattaatgtatccggtctttgttgtaaattagatatattaattattcaatgtatctaaaaa 51613020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 2352339 - 2352424
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||||||| ||| ||| |||||| |  | |   || | ||||||||||||  |||||||||||||||||||||||    
T  2352339 tttactttttagatatattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 2352424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 3549843 - 3549912
Alignment:
Q  120 tctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatga 189  Q
    |||||||||||||| | |||||||  ||| | |||| || ||||| ||||| ||||||||||||||||||    
T  3549843 tctttattatagaccacatacattatttaatgaatgaatttaaaatgttaatttttgcttataataatga 3549912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 14281620 - 14281705
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||||||| ||| |||||| |  | |   || | ||||||||||||  |||||||||||||||||||||||    
T  14281620 tttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 14281705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 30800186 - 30800239
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatc 116  Q
    ||||| ||||||  |||| |||||||| |||||| |||||||||||||||||||    
T  30800186 tcactcttataaacaaaattttactttctagatacattgaatgattaatgtatc 30800239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 33325363 - 33325448
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    |||| |||||||||| ||| ||| ||| ||||||||  | |  ||| | ||||||||||||  |||||||||||||||||||||||    
T  33325363 tttattttttagatacattaaataatttatgtatctggtttagatttttgactagatacatacattattcaatgtatctaaaaagt 33325448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 36164064 - 36164097
Alignment:
Q  161 aaaaagttaagttttgcttataataatgaccgaa 194  Q
    |||||||||| |||||||||||||||||||||||    
T  36164064 aaaaagttaatttttgcttataataatgaccgaa 36164097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 46508255 - 46508154
Alignment:
Q  85 actttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataat 184  Q
    ||||||||| |  ||||||| ||| ||| ||||  |||||||||| ||| ||||||||   |||||||||| |||| |||||||   |||||||||||||    
T  46508255 actttttaggttaattgaataattgatgcatcttgtctttattattgaccagatacataagttattcaatgaatctgaaaagtttttttttgcttataat 46508156  T
Q  185 aa 186  Q
    ||    
T  46508155 aa 46508154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 49166686 - 49166735
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    |||||||||| ||||||||||||| ||||||||||   ||||||||||||    
T  49166686 tagatacattaattattcaatgtaactaaaaagttgttttttgcttataa 49166735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 8174166 - 8174222
Alignment:
Q  127 tatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    ||||||| ||||||||| || |||||||| || |||||||||  |||||||||||||    
T  8174166 tatagaccagatacattaatcattcaatgaatataaaaagttgtgttttgcttataa 8174222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 8258081 - 8257957
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| |||||| |||||| |||| || |||||||||||| ||| ||| | | |||||| |  |||||||||||    | |||||||  | ||| ||||||    
T  8258081 tccggtcactaatataagcaaaaattcactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacattattaattgaatgta 8257982  T
Q  158 tctaaaaagttaagttttgcttata 182  Q
    |||||||||| || |||||||||||    
T  8257981 tctaaaaagtgaatttttgcttata 8257957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 13877123 - 13877051
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattata 130  Q
    |||| ||||| |||||||||||| ||||| |||||||| |||| |||   |||||||| | ||||||||||||    
T  13877123 tccggtcactcttataagtaaaattttacattttagatttattcaatctataatgtatatgatctttattata 13877051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 14418153 - 14418193
Alignment:
Q  152 aatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||||||||| || ||||||||||| |||||||||    
T  14418153 aatgtatctaaaaagtgaatttttgcttatattaatgaccg 14418193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 203
Target Start/End: Complemental strand, 18569845 - 18569693
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattatt 150  Q
    |||||| |||||||| |||||||| |||||  |||||||||||||  |||||| || | ||||||   | | ||| |||||| || ||||||   |||||    
T  18569845 tacttcctccgatcattattataattaaaaaattactttttagattcattgaacgactgatgtatgagaccattaatatagattatatacatcatttatt 18569746  T
Q  151 caatgtatctaaaaagttaagttttgcttataataatgaccgaaggaaatact 203  Q
    ||||| || |||||| | |  |||||||| |||||||| ||| ||||| ||||    
T  18569745 caatgaatttaaaaaataattttttgcttgtaataatggccggaggaagtact 18569693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 23398159 - 23398195
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  23398159 gactagatacatacattattcaatgtatctaaaaagt 23398195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 24419612 - 24419660
Alignment:
Q  135 agatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    ||||||||| ||||||||||||| ||||||||||   ||||||||||||    
T  24419612 agatacattaattattcaatgtacctaaaaagttgttttttgcttataa 24419660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 25395947 - 25395983
Alignment:
Q  85 actttttagatatattgaatgattaatgtatctaatc 121  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  25395947 actttttagatacattgaataattaatgtatctaatc 25395983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 26545076 - 26545112
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  26545076 gactagatacatacattattcaatgtatctaaaaagt 26545112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 39931181 - 39931145
Alignment:
Q  57 atccgatcactattataagtaaaactttactttttag 93  Q
    |||||||||||||||||||||||| | ||||||||||    
T  39931181 atccgatcactattataagtaaaattctactttttag 39931145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 42761497 - 42761457
Alignment:
Q  152 aatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||| |||||||| || ||||||||||||||||||||||||    
T  42761497 aatgaatctaaaatgtaaagttttgcttataataatgaccg 42761457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 48083637 - 48083509
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    |||||| |||||| |||||||||  ||||||||  ||| ||| | ||| |||| | ||||||||||||||| | ||||||   ||| | |||| | ||||    
T  48083637 tcactaatataagcaaaactttatattttagattcattcaattaataacgtatatgatctttattatagaccacatacatcatttaatgaatgaacctaa 48083538  T
Q  163 aaagttaagttttgcttataataatgacc 191  Q
    ||  |||| |||||||||||||| |||||    
T  48083537 aatattaatttttgcttataatagtgacc 48083509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 8e-37; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 51 - 205
Target Start/End: Complemental strand, 6197971 - 6197817
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattatt 150  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||| ||| ||| |||||||||| |||||| |  || |||||||||||||| | ||||    
T  6197971 tactccatccggtcactattataagcaaaactttactttttagatacattaaataattaatgtatttaatctatgataaagactagatacattaactatt 6197872  T
Q  151 caatgtatctaaaaagttaagttttgcttataataatgaccgaaggaaatacttg 205  Q
     ||||||||||||||||  ||||||||||||||||||||||| ||| | ||||||    
T  6197871 taatgtatctaaaaagtggagttttgcttataataatgaccggagggagtacttg 6197817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 6197828 - 6197962
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||| ||||||||| ||||||  |||||||||||| ||| |||  |||||||||||| ||||||| ||||| || ||||||| |||||| ||||||    
T  6197828 tccggtcattattataagcaaaactccactttttagatacattaaatagttaatgtatctagtctttatcatagattaaatacattaattatttaatgta 6197927  T
Q  158 tctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||| ||||||||||||||||| ||||||    
T  6197928 tctaaaaagtaaagttttgcttataatagtgaccg 6197962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 43140548 - 43140683
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatc--tttattatagactagatacattgattattcaatg 155  Q
    |||| ||||||||||||  ||||| |||||| ||||||| ||||||| ||||||||||||||||  ||||||||  | |||||||||| ||||||||| |    
T  43140548 tccggtcactattataaacaaaacattacttattagatacattgaataattaatgtatctaatctttttattattaattagatacattaattattcaa-g 43140646  T
Q  156 tatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||| | |||||||| |||||||||||||||    
T  43140647 tatctaaaaaatgaagttttgtttataataatgaccg 43140683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 167
Target Start/End: Complemental strand, 11322699 - 11322591
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||||||||||||||||| ||||||  | |||||||||||||||||| |||||| |||| |||||||||||||||   |||||||| ||||||||||| |    
T  11322699 tccgatcactattataagcaaaactcaa-tttttagatatattgaataattaatatatccaatctttattatagatcggatacattaattattcaatgca 11322601  T
Q  158 tctaaaaagt 167  Q
    ||||||||||    
T  11322600 tctaaaaagt 11322591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 13325116 - 13325225
Alignment:
Q  77 aaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttg 176  Q
    ||||||| | |||||||||| ||||||| ||||||||||||| |  |||| |||  ||| |||||||||||||||||| || ||||||||| |||||||     
T  13325116 aaaacttcaatttttagatacattgaataattaatgtatctagt--ttataata--ctaaatacattgattattcaatatacctaaaaagtgaagttttc 13325211  T
Q  177 cttataataatgac 190  Q
    ||||||||||||||    
T  13325212 cttataataatgac 13325225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 13325220 - 13325116
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||| ||||||| ||||||||| |||||||||| || ||||||| || |    |||||| |||||||||||| |||||||||||||||||||||     
T  13325220 tattataaggaaaacttcactttttaggtatattgaataatcaatgtatttagt----attataaactagatacattaattattcaatgtatctaaaaat 13325125  T
Q  167 ttaagtttt 175  Q
    | |||||||    
T  13325124 tgaagtttt 13325116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 192
Target Start/End: Original strand, 27938996 - 27939127
Alignment:
Q  61 gatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatct 160  Q
    ||||| ||| ||||||||||||  ||||| ||  |  ||||||| || |||||||||| ||||||||||||||| | |||||| ||||||||||||||||    
T  27938996 gatcattatcataagtaaaactccactttataagtgcattgaataatcaatgtatctagtctttattatagactgggtacattcattattcaatgtatct 27939095  T
Q  161 aaaaagttaagttttgcttataataatgaccg 192  Q
    ||||| | || |||| || |||||| ||||||    
T  27939096 aaaaaataaaattttactcataatagtgaccg 27939127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 189
Target Start/End: Complemental strand, 27939124 - 27938998
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    |||||||||| ||||||| |||| |||||||||| ||||||| || |||||| | | ||| || || |||||||||||||||||||||||||| |  ||     
T  27939124 tcactattatgagtaaaattttattttttagatacattgaataatgaatgtacccagtctataataaagactagatacattgattattcaatgcacttat 27939025  T
Q  163 aaagttaagttttgcttataataatga 189  Q
    |||||  |||||| ||||| |||||||    
T  27939024 aaagtggagttttacttatgataatga 27938998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 158508 - 158444
Alignment:
Q  115 tctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgctt 179  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| || ||||||||    
T  158508 tctaatctttattttagactacatacattaattattcaatgtatctaaaaagtgaaattttgctt 158444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 28205895 - 28205809
Alignment:
Q  99 ttgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataata 185  Q
    |||||| ||||||||||||| ||||| |||| |||  |||||||| |||||||||||||||| |||| |||| ||||| ||||||||    
T  28205895 ttgaataattaatgtatctagtctttgttatggacatgatacattaattattcaatgtatctgaaaaattaaattttgtttataata 28205809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 43140692 - 43140550
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattata--gactagatacattgatta 148  Q
    |||||| |||| ||| ||||||||  ||||||| | ||||||||||  |||||| |||||||||||||||   || || |  || |||||||||| ||||    
T  43140692 tacttcgtccggtcattattataaacaaaacttcattttttagatac-ttgaataattaatgtatctaattaataataaaaagattagatacattaatta 43140594  T
Q  149 ttcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||||||| |||| | |||||| |||||||| ||||||    
T  43140593 ttcaatgtatctaataagtaatgttttgtttataatagtgaccg 43140550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 194
Target Start/End: Original strand, 36916582 - 36916721
Alignment:
Q  55 tcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaat 154  Q
    ||||||| |||||||||||||||||| ||| | |||||||| |||| ||| | | || ||| || |||||||||||||| | |||||||  ||| | |||    
T  36916582 tcatccggtcactattataagtaaaattttgcattttagatttattcaattaatgatatatttagtctttattatagaccacatacattatttaataaat 36916681  T
Q  155 gtatctaaaaagttaagttttgcttataataatgaccgaa 194  Q
      ||||||||  | || |||||||||||||| ||||||||    
T  36916682 aaatctaaaatataaaattttgcttataatagtgaccgaa 36916721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 65 - 167
Target Start/End: Complemental strand, 1214067 - 1213965
Alignment:
Q  65 actattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaa 164  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||||| |  |||| || || |||  || || ||| |||||| ||||||| |||||    
T  1214067 actattataaataaaactctactttttagatatattgaataattaatgtacccgatctataataaagatcaggtaaattaattattgaatgtatttaaaa 1213968  T
Q  165 agt 167  Q
    |||    
T  1213967 agt 1213965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 185
Target Start/End: Original strand, 11322558 - 11322690
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattatt 150  Q
    |||| |||| ||||||| ||||||| |||| |  |||||||||||  ||||||| |||||||||||  |||| || || ||| | |||| ||| ||||||    
T  11322558 tactccatctgatcactgttataagaaaaagtc-actttttagatgcattgaataattaatgtatccgatctataataaagattggatatattaattatt 11322656  T
Q  151 caatgtatctaaaaagttaagttttgcttataata 185  Q
    |||| |||||||||| || ||||||||||||||||    
T  11322657 caatatatctaaaaa-ttgagttttgcttataata 11322690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 189
Target Start/End: Complemental strand, 2296608 - 2296481
Alignment:
Q  62 atcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatcta 161  Q
    ||||||||||||||||||| ||| | ||||||||  ||| ||| | |||||||  |  |||||||||||||| | ||||||   ||| | |||| |||||    
T  2296608 atcactattataagtaaaattttgcattttagattcattcaattaataatgtacatggtctttattatagaccatatacatcatttaatgaatgaatcta 2296509  T
Q  162 aaaagttaagttttgcttataataatga 189  Q
    ||| || || ||||||||||||||||||    
T  2296508 aaatgtaaaattttgcttataataatga 2296481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 325243 - 325313
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||||||||| ||| ||| ||||||||||||| |||| ||| || || ||||||||| |||||||||||||    
T  325243 tttttagatacatttaataattaatgtatctagtcttcattgtaaacgagatacattaattattcaatgta 325313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 24287923 - 24287789
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||| |||||||||||||||||| | |||||||| |||| | | | | |||||| |  |||||||||||||| | ||||||   ||| | |||| |    
T  24287923 tccggtcattattataagtaaaactttgcattttagatttattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaatgaa 24287824  T
Q  158 tctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||| |  ||||||||||||||||| ||||||    
T  24287823 tctaaaatgcaaagttttgcttataatagtgaccg 24287789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 27976799 - 27976860
Alignment:
Q  129 tagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgac 190  Q
    ||||| ||||||||| ||||||||||| |||||||||| | | |||||||||||||| ||||    
T  27976799 tagaccagatacattaattattcaatgaatctaaaaagatcatttttgcttataatagtgac 27976860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 28034068 - 28034129
Alignment:
Q  129 tagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgac 190  Q
    ||||| ||||||||| ||||||||||| |||||||||| | | |||||||||||||| ||||    
T  28034068 tagaccagatacattaattattcaatgaatctaaaaagatcatttttgcttataatagtgac 28034129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 185
Target Start/End: Original strand, 1213965 - 1214065
Alignment:
Q  85 actttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataat 184  Q
    |||||||| ||| ||| ||| |||||| || || ||||||||||||||   | |||||| |||||||||| ||||||||||||  ||||||  |||||||    
T  1213965 actttttaaatacattcaataattaatttacctgatctttattatagatcgggtacattaattattcaatatatctaaaaagtagagttttatttataat 1214064  T
Q  185 a 185  Q
    |    
T  1214065 a 1214065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 197
Target Start/End: Complemental strand, 2805944 - 2805812
Alignment:
Q  65 actattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaa 164  Q
    |||||||||| ||||| ||||| ||||| ||  ||| ||| | |||||||| | ||||||||||||||| | ||| ||   ||| | |||| ||| ||||    
T  2805944 actattataaataaaattttacattttaaattcattcaattaataatgtatatgatctttattatagaccacatatatcatttaataaatgaatccaaaa 2805845  T
Q  165 agttaagttttgcttataataatgaccgaagga 197  Q
     || || ||||||||||||||||||| ||||||    
T  2805844 tgtaaaattttgcttataataatgactgaagga 2805812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 20694448 - 20694528
Alignment:
Q  85 actttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaa 165  Q
    |||||||||||| ||||||| |||||| |||| | ||    ||||||  |||||||||||| |||||||||||||||||||    
T  20694448 actttttagatacattgaataattaatttatcaagtcacatttataggttagatacattgactattcaatgtatctaaaaa 20694528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 43295132 - 43295080
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    ||||||||||||  |||||||||||||||||||||||||| |||  |||||||    
T  43295132 gactagatacatacattattcaatgtatctaaaaagttaactttctcttataa 43295080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 5888468 - 5888341
Alignment:
Q  64 cactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaa 163  Q
    |||||||||||| |||| | |||||| |||||  ||| ||| | | |||||| |  |||||||||||||| | ||||||   ||| | |||| |||||||    
T  5888468 cactattataagcaaaaatctactttgtagattcattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatgaatctaaa 5888369  T
Q  164 aagttaagttttgcttataataatgacc 191  Q
    | ||||| |||||||||||||| |||||    
T  5888368 acgttaatttttgcttataatagtgacc 5888341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 37716073 - 37716148
Alignment:
Q  55 tcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattata 130  Q
    ||||||||||| || ||||||||||| || |||||||||||||||| ||| | | || ||| || |||||||||||    
T  37716073 tcatccgatcattaatataagtaaaatttcactttttagatatatttaattaatgatatatgtagtctttattata 37716148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 42662713 - 42662816
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatct-aaaaagttaagttttgcttataata 185  Q
    |||||| || |||||||| |||||||||||| |||    ||||||||  ||||||||||||||| |||| | || ||||| |||| |||||||||||||     
T  42662713 tttttaaatttattgaataattaatgtatctgatcaaatttatagacctgatacattgattatttaatgaacctaaaaaaattaatttttgcttataatt 42662812  T
Q  186 atga 189  Q
    ||||    
T  42662813 atga 42662816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 43932107 - 43932189
Alignment:
Q  110 atgtatctaatctttatt-atagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||||||||| |||| ||| || ||||||||| ||||||||||| ||||||||||| || | || |||||||||| |||||    
T  43932107 atgtatctaatctatatttata-acaagatacattaattattcaatgaatctaaaaagtcaattgtttcttataataaggaccg 43932189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 44577193 - 44577244
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttataata 185  Q
    |||||||||| |||||||||||||| |||||| | || ||||||||||||||    
T  44577193 tagatacattaattattcaatgtatttaaaaattaaaattttgcttataata 44577244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 197
Target Start/End: Complemental strand, 34326378 - 34326244
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    |||||||||||||||||| ||| | ||||| ||  ||| ||| | | |||||| || ||||||||||| || | ||||||   | ||| |||| ||||||    
T  34326378 tcactattataagtaaaattttgcattttacattcattcaattaatgatgtatatagtctttattataaacaacatacatcattaattgaatgaatctaa 34326279  T
Q  163 aaagttaagttttgcttataataatgaccgaagga 197  Q
    || |  ||||||||||||| |||||||||| ||||    
T  34326278 aatgcaaagttttgcttatgataatgaccggagga 34326244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 37356622 - 37356656
Alignment:
Q  147 tattcaatgtatctaaaaagttaagttttgcttat 181  Q
    |||||||||||| ||||||||||||||||||||||    
T  37356622 tattcaatgtatttaaaaagttaagttttgcttat 37356656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 41915667 - 41915709
Alignment:
Q  125 attatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||| ||||||||||||  |||||||||||||||||||||||    
T  41915667 attattgactagatacatacattattcaatgtatctaaaaagt 41915709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 429847 - 429892
Alignment:
Q  137 atacattgattattcaatgtatctaaaaagttaagttttgcttata 182  Q
    |||||||||||||||||||||||||||||  ||  |||||||||||    
T  429847 atacattgattattcaatgtatctaaaaaagtattttttgcttata 429892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 13832008 - 13831879
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||| |||| || ||||||||| |  || |||| |||||||||||| ||  | | ||||||||| ||||||   |||| ||||| | | ||||||    
T  13832008 tattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactatatacatcacttatacaatgaaccaaaaaag 13831909  T
Q  167 ttaagttttgcttataataatgaccgaagg 196  Q
    |||| | || |||||||||| |||||||||    
T  13831908 ttaattgtttcttataataaggaccgaagg 13831879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 38764464 - 38764395
Alignment:
Q  85 actttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaat 154  Q
    ||||| ||||| |||||||| |||| | ||| ||  || |||||||||||||||||||| ||||||||||    
T  38764464 actttatagatttattgaataattagtatatttagcctatattatagactagatacattaattattcaat 38764395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 43135074 - 43135159
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||||||| ||| |||||| |  | |   || | ||||||||||||  |||||||||||||||||||||||    
T  43135074 tttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 43135159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 2339369 - 2339405
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  2339369 gactagatacatacattattcaatgtatctaaaaagt 2339405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 11293256 - 11293220
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  11293256 gactagatacatacattattcaatgtatctaaaaagt 11293220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 20694484 - 20694432
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    |||| |||| ||| |||||||||||||||||||||||| | ||||| ||||||    
T  20694484 gacttgataaattaattattcaatgtatctaaaaagttgatttttgtttataa 20694432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 27976859 - 27976767
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatg 155  Q
    ||||||||||||| |||| |   ||||||||||  ||||||| ||||||||||||  |||  ||||||||| |||| |||| |||||| ||||    
T  27976859 tcactattataagcaaaaatgatctttttagattcattgaataattaatgtatctggtctacattatagaccagatgcattaattatttaatg 27976767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 155
Target Start/End: Complemental strand, 28034128 - 28034036
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatg 155  Q
    ||||||||||||| |||| |   ||||||||||  ||||||| ||||||||||||  |||  ||||||||| |||| |||| |||||| ||||    
T  28034128 tcactattataagcaaaaatgatctttttagattcattgaataattaatgtatctggtctacattatagaccagatgcattaattatttaatg 28034036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 40465307 - 40465271
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  40465307 gactagatacatacattattcaatgtatctaaaaagt 40465271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 7632764 - 7632906
Alignment:
Q  50 gtacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattat 149  Q
    ||||| |||||||||||||||||||  ||||||| ||||| ||  || ||| ||| || |||||||||| ||||||||||||||  |||||||| |||||    
T  7632764 gtactccatccgatcactattataaacaaaacttcactttctaactacattcaataatcaatgtatctagtctttattatagaccggatacattaattat 7632863  T
Q  150 tcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||| ||||||||||||||||||||||| |||||||||||||||    
T  7632864 tcagtgtatctaaaaagttaagttttgtttataataatgaccg 7632906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 26388202 - 26388327
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||  |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| |||||||||| ||| |||||||    
T  26388202 tattataaacaaaactctactttttagatatattgaataattaatgtatctaatctttattatagactgaatacattaattattcaatatatataaaaag 26388301  T
Q  167 ttaagttttgcttataataatgaccg 192  Q
    |  |||||| ||||||||| ||||||    
T  26388302 tggagtttttcttataatagtgaccg 26388327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 14589677 - 14589543
Alignment:
Q  62 atcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatcta 161  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| || ||| | ||   ||| || || |||||||||||||  ||||||||||||||||     
T  14589677 atcactattataaataaaactttactttttagatacattgaataatcaatctgtccggtctataataaagactagatacatgaattattcaatgtatctg 14589578  T
Q  162 aaaagttaagttttgcttataataatgaccgaagg 196  Q
    |||||| |||||||| |||||||||||||||||||    
T  14589577 aaaagtgaagttttgtttataataatgaccgaagg 14589543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 51 - 185
Target Start/End: Original strand, 14623196 - 14623330
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattatt 150  Q
    |||||||| || ||| ||||||||| ||||||| |||||| ||||| ||||||| ||| |||||||||||||||||||||||||  | | ||| ||| ||    
T  14623196 tacttcattcggtcattattataagcaaaacttcacttttcagatacattgaataattcatgtatctaatctttattatagactgaacagattaattttt 14623295  T
Q  151 caatgtatctaaaaagttaagttttgcttataata 185  Q
    ||||||||||||||||| |||||||  ||||||||    
T  14623296 caatgtatctaaaaagtgaagttttatttataata 14623330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 76 - 185
Target Start/End: Complemental strand, 29938735 - 29938627
Alignment:
Q  76 taaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagtttt 175  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||| |||||||| || |||||||||||| |||||| |||||||||||||||| || ||||    
T  29938735 taaaactctactttttagatacattgaataattaatgtatctagtctttattgtatactagatacattaattatt-aatgtatctaaaaagtgaaatttt 29938637  T
Q  176 gcttataata 185  Q
     |||||||||    
T  29938636 acttataata 29938627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 14623335 - 14623203
Alignment:
Q  62 atcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatcta 161  Q
    ||||||||||||| |||||||| |||||||||||| ||||||  |||||| | |  | ||| || || ||| |||||||||  ||||||||||||||||     
T  14623335 atcactattataaataaaacttcactttttagatacattgaaaaattaatctgttcagtctataataaagattagatacatgaattattcaatgtatctg 14623236  T
Q  162 aaaagttaagttttgcttataataatgaccgaa 194  Q
    |||||| ||||||||||||||||||||||||||    
T  14623235 aaaagtgaagttttgcttataataatgaccgaa 14623203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 14589554 - 14589672
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||  ||||||| |||||| ||||| ||||||| ||| ||||||||| ||||||||||||||  || | ||||||||||||||||||||||||||    
T  14589554 tattataaacaaaacttcacttttcagatacattgaataattcatgtatctagtctttattatagaccggacagattgattattcaatgtatctaaaaag 14589653  T
Q  167 ttaagttttgcttataata 185  Q
    | |||||||  ||||||||    
T  14589654 taaagttttatttataata 14589672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 33123143 - 33123017
Alignment:
Q  64 cactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaa 163  Q
    |||||||||||| |||| ||||||||||||||| | | ||| ||||| ||||| | ||| ||  | |||||||||||||| |||||||||||||| ||||    
T  33123143 cactattataagcaaaagtttactttttagatacacttaataattaacgtatcaagtctataaaaaagactagatacattaattattcaatgtatttaaa 33123044  T
Q  164 aagttaagttttgcttataataatgac 190  Q
    |||| |||||||| |||||||||||||    
T  33123043 aagtgaagttttgtttataataatgac 33123017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 33123022 - 33123140
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||  ||||||| |||||||| ||| ||||||| ||||||||||||| ||||| ||||||||| ||||| || |||||| | |||||||||||||    
T  33123022 tattataaacaaaacttcactttttaaatacattgaataattaatgtatctagtcttttttatagacttgatacgttaattattaagtgtatctaaaaag 33123121  T
Q  167 ttaagttttgcttataata 185  Q
    | || ||||||||||||||    
T  33123122 taaacttttgcttataata 33123140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 26388329 - 26388201
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||||||||||| ||||||  |||||||| ||||||||||| ||||||||||  | ||| || || ||| |||||||||| |||||||||| ||    
T  26388329 tccggtcactattataagaaaaactccactttttatatatattgaataattaatgtattcagtctataataaagattagatacattaattattcaatata 26388230  T
Q  158 tctaaaaagttaagttttgcttataataa 186  Q
    ||||||||||  ||||||| |||||||||    
T  26388229 tctaaaaagtagagttttgtttataataa 26388201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 3989524 - 3989639
Alignment:
Q  70 tataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagtta 169  Q
    |||||| ||||||| |||||||| ||| ||  ||| || ||||| |||| |||||||||||||||||||||||  |||||||||||||||| || |||||    
T  3989524 tataagcaaaacttcactttttaaatacataaaataatcaatgtttctagtctttattatagactagatacatcaattattcaatgtatcttaatagtta 3989623  T
Q  170 agttttgcttataata 185  Q
    ||||||| ||||||||    
T  3989624 agttttgattataata 3989639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 29938623 - 29938726
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    |||||||||||||||||| || |||||||||||| ||| ||| ||||||||||||| | |  | || |||||||||||||| ||||||||||||||||||    
T  29938623 tcactattataagtaaaatttcactttttagatacatt-aataattaatgtatctagtatacaataaagactagatacattaattattcaatgtatctaa 29938721  T
Q  163 aaagt 167  Q
    |||||    
T  29938722 aaagt 29938726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 3989642 - 3989524
Alignment:
Q  64 cactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaa 163  Q
    |||||||||||  ||||||| ||| || ||||| ||||||| ||| ||||||||| ||| || || |||||||| ||||||||||||  |||||| ||||    
T  3989642 cactattataatcaaaacttaactattaagatacattgaataattgatgtatctagtctataataaagactagaaacattgattattttatgtatttaaa 3989543  T
Q  164 aagttaagttttgcttata 182  Q
    |||| ||||||||||||||    
T  3989542 aagtgaagttttgcttata 3989524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 7632908 - 7632781
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||| ||||||||  ||||||| |||||||||||| | ||||| |||||||||||   ||| || || ||||||||||||||||||||| ||||||    
T  7632908 tccggtcattattataaacaaaacttaactttttagatacactgaataattaatgtatccggtctataataaagactagatacattgattattgaatgta 7632809  T
Q  158 tctaaaaagttaagttttgcttataata 185  Q
      || ||||| |||||||| ||||||||    
T  7632808 gttagaaagtgaagttttgtttataata 7632781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 6045799 - 6045717
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaa 164  Q
    ||||||||||||||| ||| ||| ||| |||||| | || |  ||| | |||||||||||| |||||||||||||||||||||    
T  6045799 tttactttttagatagattaaataatttatgtatttgatttagattcttgactagatacatagattattcaatgtatctaaaa 6045717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 24252959 - 24253008
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    |||||||||| ||||||||||||| |||||||||||  ||||||||||||    
T  24252959 tagatacattaattattcaatgtacctaaaaagttattttttgcttataa 24253008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 32124214 - 32124263
Alignment:
Q  146 ttattcaatgtatctaaaaagttaagttttgcttataataatgaccgaag 195  Q
    ||||| |||| ||||||||||| || ||||||||||||||||||||||||    
T  32124214 ttattgaatgaatctaaaaagtcaatttttgcttataataatgaccgaag 32124263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 6047914 - 6047826
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaa 170  Q
    ||||||||||||||| ||| ||| ||| |||||| | || |   || | ||||||||||||  ||||||||||||||||||||||||||    
T  6047914 tttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaagttaa 6047826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 14093147 - 14093095
Alignment:
Q  130 agactagatacattgattattcaatgtatctaaaaagttaagttttgcttata 182  Q
    |||||||||||||| |||||| ||||||| ||||||||| |||||| ||||||    
T  14093147 agactagatacattaattatttaatgtatttaaaaagttgagtttttcttata 14093095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 198
Target Start/End: Original strand, 26527192 - 26527332
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||||||||||||||||| |||| |  || ||||||||| ||| |   | |||||||| || ||||||||||| || | ||||||   ||| | |||| |    
T  26527192 tccgatcactattataagcaaaaatcaacattttagatacattcataaaataatgtatgtagtctttattataaaccacatacatcatttaatgaatgaa 26527291  T
Q  158 tctaaaaagttaagttttgcttataataatgaccgaaggaa 198  Q
    ||||||| ||||| |||||||||||||| ||| || |||||    
T  26527292 tctaaaatgttaatttttgcttataatagtgaacggaggaa 26527332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 5070000 - 5069953
Alignment:
Q  136 gatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    |||||||| ||||||||||||||||||||||||   ||||||||||||    
T  5070000 gatacattaattattcaatgtatctaaaaagttgttttttgcttataa 5069953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 6801620 - 6801581
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagttaa 170  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  6801620 gactagatacatacattattcaatgtatctaaaaagttaa 6801581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 2913394 - 2913341
Alignment:
Q  139 acattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||| ||||||||||| ||||||||||| || | ||||||||||||| |||||    
T  2913394 acattaattattcaatgaatctaaaaagtcaaatgttgcttataataaggaccg 2913341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 2913408 - 2913473
Alignment:
Q  127 tatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||||||||||  |||| ||||| | ||||||||| || | ||||||||||||| |||||    
T  2913408 tatagactagatacattacttatacaatgaacctaaaaagtcaattgttgcttataataaggaccg 2913473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 14093095 - 14093160
Alignment:
Q  70 tataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagacta 135  Q
    |||||| ||||||  |||||||| ||| ||| ||| ||||||||||||| ||||||||||| ||||    
T  14093095 tataagaaaaactcaactttttaaatacattaaataattaatgtatctagtctttattatatacta 14093160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 24949749 - 24949664
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||| ||| ||| |||||| |  | | | || | ||||||||||||  |||||||||||||||||||||||    
T  24949749 tttactttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatctaaaaagt 24949664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 885671 - 885635
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  885671 gactagatacatacattattcaatgtatctaaaaagt 885635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 7405523 - 7405559
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  7405523 gactagatacatacattattcaatgtatctaaaaagt 7405559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 17225312 - 17225276
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  17225312 gactagatacatacattattcaatgtatctaaaaagt 17225276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 31971099 - 31971063
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  31971099 gactagatacatacattattcaatgtatctaaaaagt 31971063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 7e-34; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 4132381 - 4132522
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttacttttt-agatatattgaatgattaatgtatctaatctttattatagactagatacattgattat 149  Q
    |||| |||||| ||| ||||||||| |||| || ||||||| ||||| ||||||| |||||||||| || | |||||||||||||| ||||||| | |||    
T  4132381 tactccatccggtcaatattataagcaaaatttcacttttttagatacattgaataattaatgtatatagtatttattatagactaaatacattaaatat 4132480  T
Q  150 tcaatgtatctaaaaagttaagttttgcttataataatgacc 191  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  4132481 tcaatgtatctaaaaagttaagttttgtttataataatgacc 4132522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 41115562 - 41115679
Alignment:
Q  68 attataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| |||||| |||||| ||||||  ||||||||||||||||||||||||||| |||||||||| |||||  ||||||| |||||| |    
T  41115562 attataagtaaaactgtactttgtagatacattgaacaattaatgtatctaatctttattatagagtagatacattaattatgtaatgtatataaaaaat 41115661  T
Q  168 taagttttgcttataata 185  Q
    |||||||| |||||||||    
T  41115662 taagttttacttataata 41115679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 38646175 - 38646302
Alignment:
Q  65 actattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacatt-gattattcaatgtatctaaa 163  Q
    ||||||||||||||||||  |||||||||||| ||||||| |||||| ||| |||| ||| ||||||||   |||||||  |||||||||| ||||||||    
T  38646175 actattataagtaaaactcaactttttagatacattgaataattaatatatttaatttttgttatagaccgaatacattaaattattcaatatatctaaa 38646274  T
Q  164 aagttaagttttgcttataataatgacc 191  Q
     ||| ||||||||||||||||| |||||    
T  38646275 tagtgaagttttgcttataatagtgacc 38646302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 4132516 - 4132390
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatcta-aaaa 165  Q
    ||||||||  ||||||| |||||||||||| |||||||  ||||||||| || ||| || || | |||| ||||||| ||||||||||||||||| ||||    
T  4132516 tattataaacaaaacttaactttttagatacattgaatatttaatgtatttagtctataataaatactatatacattaattattcaatgtatctaaaaaa 4132417  T
Q  166 gttaagttttgcttataataatgaccg 192  Q
    || || |||||||||||||| ||||||    
T  4132416 gtgaaattttgcttataatattgaccg 4132390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 26982823 - 26982762
Alignment:
Q  137 atacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccgaaggaa 198  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  26982823 atacattaattattcaatgtatctaaaaagtgaagttttgcttataatagtgaccgaaggaa 26982762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 190
Target Start/End: Complemental strand, 41115681 - 41115556
Alignment:
Q  65 actattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaa 164  Q
    ||||||||||||||||||| | |||||| ||| |||  || ||||||||||||| ||| || || ||| |||||||||| ||| ||||||||||||| ||    
T  41115681 actattataagtaaaacttaattttttatatacattacataattaatgtatctactctataataaagattagatacattaattgttcaatgtatctacaa 41115582  T
Q  165 agttaagttttgcttataataatgac 190  Q
    |||  |||||| |||||||| |||||    
T  41115581 agtacagttttacttataatgatgac 41115556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 23797486 - 23797348
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| |||||||||||||||||| ||| | ||||||||  ||| ||| | | ||||||||  |||||||||||||||| ||||||   ||| | |||| |    
T  23797486 tccggtcactattataagtaaaattttgcattttagattcattcaattaatgatgtatctggtctttattatagactacatacatcatttaatgaatgaa 23797387  T
Q  158 tctaaaaagttaagttttgcttataataatgaccgaagg 196  Q
    ||||||| |  || |||||||||||||| ||||||||||    
T  23797386 tctaaaatgcaaaattttgcttataatagtgaccgaagg 23797348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 43250420 - 43250473
Alignment:
Q  137 atacattgattattcaatgtatctaaaaagttaagttttgcttataataatgac 190  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  43250420 atacattaattattcaatgtatctaaaaagtaaagttttgcttataatagtgac 43250473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 192
Target Start/End: Original strand, 9555260 - 9555396
Alignment:
Q  56 catccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatg 155  Q
    |||||| ||||||| |||||||||| ||||| ||||| || |||| ||| | | |||||| || ||||||| ||| || | ||||||   ||| | ||||    
T  9555260 catccggtcactatcataagtaaaattttacattttaaatttattcaattaatgatgtatatagtctttatcataaaccacatacatcatttaatgaatg 9555359  T
Q  156 tatctaaaaagttaagttttgcttataataatgaccg 192  Q
     |||||||| || ||||||||||||||||||||||||    
T  9555360 aatctaaaatgtaaagttttgcttataataatgaccg 9555396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 21857133 - 21857073
Alignment:
Q  132 actagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||||| |||||||||||| |||||||||| || |||||||||||||| ||||||    
T  21857133 actagatacattaattattcaatgtgtctaaaaagtaaacttttgcttataatagtgaccg 21857073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 21857232 - 21857164
Alignment:
Q  50 gtacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatcta 118  Q
    |||||||||||| ||||||||||||| |||| || | |||||||| ||||||||| |||||||||||||    
T  21857232 gtacttcatccggtcactattataagcaaaaattcattttttagacatattgaataattaatgtatcta 21857164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 38646300 - 38646160
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgatt-aatgtatctaatctttattatagactagatacattgattattcaatgtatcta 161  Q
    ||||||||||||| ||||||| ||| |||||||||||||||| ||| |||||||    ||| ||  | | | || ||| ||| |||||||||||||||||    
T  38646300 tcactattataagcaaaacttcactatttagatatattgaataatttaatgtattcggtctataacaaaaattaaatatattaattattcaatgtatcta 38646201  T
Q  162 aaaagttaagttttgcttataataatgaccgaaggaaatac 202  Q
    ||||||| |||||| ||||||||| | |||| ||| |||||    
T  38646200 aaaagttgagttttacttataatagtaaccggagggaatac 38646160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 43250472 - 43250420
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtat 115  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  43250472 tcactattataagcaaaactttactttttagatacattgaataattaatgtat 43250420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 21857071 - 21857131
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatcta 118  Q
    |||| ||||||||||||| |||| ||||||||||||| | ||||||| |||||||||||||    
T  21857071 tccggtcactattataagcaaaagtttactttttagacacattgaataattaatgtatcta 21857131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 26982771 - 26982823
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtat 115  Q
    ||||||||||||| ||||||| |||||||||||| ||||||| ||||||||||    
T  26982771 tcactattataagcaaaacttcactttttagatacattgaataattaatgtat 26982823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 43250418 - 43250374
Alignment:
Q  147 tattcaatgtatctaaaaagttaagttttgcttataataatgacc 191  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||    
T  43250418 tattcaatgtatctaaaaagtaaagttttgcttataatagtgacc 43250374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 30138928 - 30138851
Alignment:
Q  56 catccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagac 133  Q
    |||||||||||| |||||||||||| ||||| ||||||||  ||| ||| | | |||||| || ||||||||||||||    
T  30138928 catccgatcactgttataagtaaaaatttacattttagattcattcaattaatgatgtatatagtctttattatagac 30138851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 43103205 - 43103076
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    |||||||||||||||||| ||||  |||||||| |||| ||| | | |||||| |||| |||| ||||| ||  ||||||   ||| | |||| || |||    
T  43103205 tcactattataagtaaaattttatattttagatttatttaattaatgatgtatataatttttaatatagtctgcatacatcatttaataaatgaatttaa 43103106  T
Q  163 aaagttaagttttgcttataataatgaccg 192  Q
    || ||||| |||||||||||||| ||||||    
T  43103105 aatgttaatttttgcttataatagtgaccg 43103076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 43250376 - 43250417
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaat 104  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  43250376 tcactattataagcaaaactttactttttagatacattgaat 43250417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 21857162 - 21857222
Alignment:
Q  132 actagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||||| |||||||||| | |||||||| | || |||||||||||||| ||||||    
T  21857162 actagatacattaattattcaatatgtctaaaaaatgaatttttgcttataatagtgaccg 21857222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 45578018 - 45578070
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtat 115  Q
    |||||||||||||||||| || |||||||||||| ||||||  ||||||||||    
T  45578018 tcactattataagtaaaatttcactttttagatacattgaacaattaatgtat 45578070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 2363076 - 2363158
Alignment:
Q  107 ttaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgac 190  Q
    |||||||||||||||| ||||||| |  ||||||||| |||||||||| ||| || ||||| |||||||| ||| |||| ||||    
T  2363076 ttaatgtatctaatctatattata-atcagatacattaattattcaatctatttagaaagtaaagttttgtttacaatagtgac 2363158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 8169242 - 8169104
Alignment:
Q  50 gtacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattat 149  Q
    |||||||||||| | ||||||||||| |||| || |||||||||||  ||| ||| | | |||||| || ||| || ||||||| | ||||||   ||||    
T  8169242 gtacttcatccggttactattataagcaaaagttaactttttagattcattcaataaatgatgtatgtagtctata-tatagaccacatacatcatttat 8169144  T
Q  150 tcaatgtatctaaaaagttaagttttgcttataataatga 189  Q
    | |||| | ||||||||  || ||||||||||||||||||    
T  8169143 tgaatgaacctaaaaagccaacttttgcttataataatga 8169104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 37491280 - 37491407
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    ||||||||||||| |||| |||||||||||||| |||| ||| | | |||||| || ||| ||| |  ||| | ||||||   ||||| |||| ||||||    
T  37491280 tcactattataagcaaaaatttactttttagatttattaaataaatgatgtatgtagtctatataagtgaccatatacatcatttattaaatgaatctaa 37491379  T
Q  163 aaagttaagttttgcttataataatgac 190  Q
    ||||| || ||||| |||||||| ||||    
T  37491380 aaagtaaacttttgattataatagtgac 37491407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 2943350 - 2943212
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||||||||||| ||||  |||  ||||| ||  ||| ||| | |||||||| || |||||||| ||||| | ||||||   ||| | |||| |    
T  2943350 tccggtcactattataagcaaaaaattatattttacattcattcaattaataatgtatgtactctttattgtagaccacatacatcatttaatgaatgaa 2943251  T
Q  158 tctaaaaagttaagttttgcttataataatgaccgaagg 196  Q
    ||||||| ||| | |||||||||||||| ||||||||||    
T  2943250 tctaaaatgttgatttttgcttataatagtgaccgaagg 2943212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 8169167 - 8169225
Alignment:
Q  127 tatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataata 185  Q
    ||||||||| ||||||   ||||| |||| |||||||||||||| ||||||||||||||    
T  8169167 tatagactacatacatcatttattgaatgaatctaaaaagttaacttttgcttataata 8169225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 15996225 - 15996147
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaa 165  Q
    |||||||||| ||||||| ||||||||||| ||||    ||||||   ||||||||| ||||||||||||| |||||||    
T  15996225 tttttagatacattgaataattaatgtatccaatcacgtttataggtcagatacattaattattcaatgtacctaaaaa 15996147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 21587897 - 21587839
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||| |||||| |||| ||||  ||||| ||||||||||||||||| ||||||    
T  21587897 tagatacattaattatttaatgcatcttgaaagtgaagttttgcttataatagtgaccg 21587839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 34840664 - 34840618
Alignment:
Q  146 ttattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||| |||| ||||||||||| || |||||||||||||||||||||    
T  34840664 ttattgaatgaatctaaaaagtgaacttttgcttataataatgaccg 34840618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 24932446 - 24932385
Alignment:
Q  137 atacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccgaaggaa 198  Q
    ||||||| ||||||| ||| | ||||||||| || |||| |||||||||| |||||||||||    
T  24932446 atacattaattattctatgaacctaaaaagtcaattttttcttataataaggaccgaaggaa 24932385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 45578070 - 45578017
Alignment:
Q  137 atacattgattattcaatgtatctaaaaagttaagttttgcttataataatgac 190  Q
    ||||||| ||| ||||||||||||||||||| || |||| ||||||||| ||||    
T  45578070 atacattaattgttcaatgtatctaaaaagtgaaattttacttataatagtgac 45578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 2363157 - 2363078
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacatt 143  Q
    |||||||| |||  ||||||||||||| || ||| ||||||| |||||||||||| || | || |||||| ||||||||||    
T  2363157 tcactattgtaaacaaaactttactttctaaatagattgaataattaatgtatctgat-tataatatagattagatacatt 2363078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 7107709 - 7107745
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  7107709 gactagatacataaattattcaatgtatctaaaaagt 7107745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 12426599 - 12426547
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    ||||||||||||  ||||||||||||||||||||| |||| |||  |||||||    
T  12426599 gactagatacatacattattcaatgtatctaaaaaattaactttctcttataa 12426547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 12763308 - 12763344
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  12763308 gactagatacatacattattcaatgtatctaaaaagt 12763344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 17801458 - 17801494
Alignment:
Q  132 actagatacattgattattcaatgtatctaaaaagtt 168  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  17801458 actagatacattaattattcaatgaatctaaaaagtt 17801494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 20397894 - 20397930
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  20397894 gactagatacatacattattcaatgtatctaaaaagt 20397930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 21387630 - 21387710
Alignment:
Q  110 atgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgac 190  Q
    |||||| || ||||||||||| || | ||||||   ||||| |||| ||||||||||| || |||||||||||||| ||||    
T  21387630 atgtatgtagtctttattatataccacatacatcatttattaaatgaatctaaaaagtaaaattttgcttataatattgac 21387710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 29770401 - 29770437
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  29770401 gactagatacatgcattattcaatgtatctaaaaagt 29770437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 38940355 - 38940224
Alignment:
Q  60 cgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatc 159  Q
    |||| |||||||||| ||||| || |||||||| ||  ||| ||| | | |||||| || ||| ||| |||||| | || ||||  ||||| |||| |||    
T  38940355 cgattactattataattaaaaattcactttttaaattcatttaataaatgatgtatgtagtctatat-atagaccacattcattatttattgaatgaatc 38940257  T
Q  160 taaaaagttaagttttgcttataataatgaccg 192  Q
    ||||| || || |||||||||||||||||||||    
T  38940256 taaaatgtcaatttttgcttataataatgaccg 38940224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 190
Target Start/End: Complemental strand, 21032661 - 21032538
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||  |||| | ||||||||||||||||||||| ||||||||||||| |||||||||||||||  ||||||| |||||||||||||| |||||||    
T  21032661 tattataaacaaaattctactttttagatatattgaataattaatgtatctagtctttattatagactgaatacattaattattcaatgtatataaaaag 21032562  T
Q  167 ttaagttttgcttataataatgac 190  Q
    |  |||||||||||||||| ||||    
T  21032561 tggagttttgcttataatagtgac 21032538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 42364222 - 42364356
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||| ||||||  |||| ||||||||||| ||| ||||||| |||||||||| || ||||||||||| |||||||||  | |||||||||||||    
T  42364222 tccggtcactgttataaacaaaaatttactttttaaatacattgaataattaatgtatgtagtctttattataaactagataccctaattattcaatgta 42364321  T
Q  158 tctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||| ||||||||||||||||| ||||||    
T  42364322 tctaaaaagtgaagttttgcttataatagtgaccg 42364356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 5240335 - 5240230
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataa 186  Q
    |||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| | || ||||||||||||||     
T  5240335 tttttagatacattgaataattaatgtatctaaactttattatatactagatacattaattattcaatgtatctaaaaaatcaaattttgcttataatag 5240236  T
Q  187 tgaccg 192  Q
    ||||||    
T  5240235 tgaccg 5240230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 29486636 - 29486500
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||||||||||||||||| ||||  | |||||||||||| ||||||| |||||| ||| || ||||||| ||| |||||||||||| |||||||||||||    
T  29486636 tccgatcactattataagcaaaatctgactttttagatacattgaataattaatatatttagtctttatcataaactagatacattaattattcaatgta 29486537  T
Q  158 tctaaaaagttaagttttgcttataataatgaccgaa 194  Q
    ||||||| || || |||||||||||||| ||| ||||    
T  29486536 tctaaaatgtgaaattttgcttataatagtgatcgaa 29486500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 26221169 - 26221028
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattatt 150  Q
    |||||| ||||  ||||| |||||||||||||| |||||||||||| | ||||| |||||| |||   |||| || || | |||||||||||| ||||||    
T  26221169 tacttcttccgggcactaatataagtaaaacttcactttttagatacactgaataattaatatataccatctataataaaaactagatacattaattatt 26221070  T
Q  151 caatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||||||||||||| |||||||| |||||||| ||||||    
T  26221069 caatgtatctaaaaagtaaagttttgtttataatattgaccg 26221028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 26221026 - 26221150
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||| ||||||||  |||||||||||||||||||| ||||||| ||||||||||||| | |||||||||||    ||| ||| |||||||| ||||    
T  26221026 tccggtcaatattataaacaaaactttactttttagatacattgaataattaatgtatctagtttttattatagatggtatatattaattattcagtgta 26221125  T
Q  158 tctaaaaagttaagttttgcttata 182  Q
    |||||||||| ||||||| ||||||    
T  26221126 tctaaaaagtgaagttttacttata 26221150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 7604329 - 7604199
Alignment:
Q  56 catccgatcactattataagtaaaactttactttttagatatattgaatga-ttaatgtatctaatctttattatagactagatacattgattattcaat 154  Q
    |||||| ||| |||||||||||||| || |||||||||||||| ||||| | |||||| || || ||||||||||||||| ||| ||||  ||||||| |    
T  7604329 catccggtcattattataagtaaaatttgactttttagatatactgaataaattaatggatttagtctttattatagacttgatgcattacttattcagt 7604230  T
Q  155 gtatctaaaaagttaagttttgcttataata 185  Q
     |||||||||||| || ||||||||||||||    
T  7604229 atatctaaaaagtgaaattttgcttataata 7604199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 192
Target Start/End: Complemental strand, 42364358 - 42364224
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||||||||||| ||||||| |||||||||||| ||||||| ||||  ||||||| | | || || |||||| ||||||| |||||||||||||    
T  42364358 tccggtcactattataagcaaaacttcactttttagatacattgaataattagggtatctagtttataataaagactacatacattaattattcaatgta 42364259  T
Q  158 tctaaaaagttaagttttgcttataataatgaccg 192  Q
    | |||||||| || ||||| |||||| | ||||||    
T  42364258 tttaaaaagtaaatttttgtttataacagtgaccg 42364224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 29486502 - 29486627
Alignment:
Q  60 cgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatc 159  Q
    |||||||||||||||| |||| || || ||||||||| ||||||| ||||||||||||| | | |  || |||||| ||| ||| |||||||||||||||    
T  29486502 cgatcactattataagcaaaatttcacattttagatacattgaataattaatgtatctagtttatgataaagactaaatatattaattattcaatgtatc 29486601  T
Q  160 taaaaagttaagttttgcttataata 185  Q
    |||||||| |  ||||||||||||||    
T  29486602 taaaaagtcagattttgcttataata 29486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 21032539 - 21032662
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    ||||||||||||| ||||||  |||||||| ||| ||||||| ||||||||||  | ||| || || |||||||||||||| |||||||||| |||||||    
T  21032539 tcactattataagcaaaactccactttttatatacattgaataattaatgtattcagtctataataaagactagatacattaattattcaatatatctaa 21032638  T
Q  163 aaagttaagttttgcttataataa 186  Q
    |||||  | ||||| |||||||||    
T  21032639 aaagtagaattttgtttataataa 21032662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 6834041 - 6834120
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatct----ttattatagactagatacat 142  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||    ||||||||||||||||||||    
T  6834041 tattataagtaaaattttactttttagatatattgaataattaatgtatttaatctttaattattatagactagatacat 6834120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 185
Target Start/End: Complemental strand, 3100541 - 3100416
Alignment:
Q  60 cgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatc 159  Q
    ||||||||||||||||| ||| ||||| ||||||||  ||| ||| | | |||||| | ||||||||||||||||| ||||||   ||||| |||| |||    
T  3100541 cgatcactattataagtgaaaatttacattttagattcattcaattaatgatgtatatgatctttattatagactacatacatcatttattgaatgaatc 3100442  T
Q  160 taaaaagttaagttttgcttataata 185  Q
    ||||| ||||| ||||||||||||||    
T  3100441 taaaatgttaatttttgcttataata 3100416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 165
Target Start/End: Original strand, 5240228 - 5240335
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||||||||||| |||| || | |||||||||| ||||||| ||||||||||||| | | || || ||  |||||||||| |||||||||||||    
T  5240228 tccggtcactattataagcaaaatttgattttttagatacattgaataattaatgtatctagtatataataaagtttagatacattaattattcaatgta 5240327  T
Q  158 tctaaaaa 165  Q
    ||||||||    
T  5240328 tctaaaaa 5240335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 7604190 - 7604325
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattga-ttattcaatgt 156  Q
    |||||||||||||||||| |||| || |||||||||||||| ||||| | ||||| ||| | ||| || || |||||| || |||| | ||||||| | |    
T  7604190 tccgatcactattataagcaaaatttcactttttagatatactgaataagtaatgcatcaagtctataataaagactaaatccattaatttattcagtat 7604289  T
Q  157 atctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||||||| || |||| ||||||||||||||||    
T  7604290 atctaaaaagtcaaattttacttataataatgaccg 7604325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 1098622 - 1098763
Alignment:
Q  50 gtacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattat 149  Q
    ||||||| ||| ||||||||||||||||||| || |||||||||||  ||| ||| | | |||||| |  ||| || ||||||||| |||||||  ||||    
T  1098622 gtacttcctccaatcactattataagtaaaagttgactttttagattcattcaataaatgatgtatgtggtctata-tatagactacatacattatttat 1098720  T
Q  150 tcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    | |||| ||||||||| | || |||||||||||||| ||||||    
T  1098721 taaatgaatctaaaaaataaacttttgcttataatagtgaccg 1098763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 183
Target Start/End: Complemental strand, 28499921 - 28499795
Alignment:
Q  56 catccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatct-ttattatagactagatacattgattattcaat 154  Q
    |||||||||||  ||||||| |||| |  |||||||||||||||||||| |||||||||| |||||| | ||||| |||  ||||||||  |||||||||    
T  28499921 catccgatcacatttataagaaaaaata-actttttagatatattgaataattaatgtatttaatctataattat-gaccggatacattagttattcaat 28499824  T
Q  155 gtatctaaaaagttaagttttgcttataa 183  Q
    | ||||||||| |||  ||||||||||||    
T  28499823 gaatctaaaaaattattttttgcttataa 28499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 184
Target Start/End: Original strand, 892560 - 892679
Alignment:
Q  65 actattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaa 164  Q
    ||||||||||| |||| || |||||||||||  ||||||| |||||||||| |  ||| || |||| |||||||||||   |||||||||| || | |||    
T  892560 actattataagcaaaaattcactttttagattcattgaataattaatgtatttgttctatactatatactagatacatccgttattcaatgaattttaaa 892659  T
Q  165 agttaagttttgcttataat 184  Q
    ||| || |||||||||||||    
T  892660 agtaaatttttgcttataat 892679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 12959965 - 12960072
Alignment:
Q  77 aaaactttactttttagatatattgaatga--ttaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttt 174  Q
    ||||||| || ||||| ||||||||||| |  |||||||||||| ||||||||||||| |||||||| | | |||||  ||||||||| ||||  |||||    
T  12959965 aaaacttcacattttaaatatattgaataaaattaatgtatctagtctttattatagaatagatacagtaactattcgttgtatctaagaagtggagttt 12960064  T
Q  175 tgcttata 182  Q
    || |||||    
T  12960065 tgtttata 12960072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 31706100 - 31706013
Alignment:
Q  55 tcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacat 142  Q
    ||||||||||| |||||||||||||| ||||| ||||| ||  ||| ||| | |||||||| |||| |||||||||||| | ||||||    
T  31706100 tcatccgatcattattataagtaaaaatttacattttaaattcatttaattaataatgtatataatttttattatagaccacatacat 31706013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 185
Target Start/End: Complemental strand, 892684 - 892562
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    |||| |||||||| |||| ||||||||| | ||  ||||||| |   ||||||||| | | || ||||||  | ||||||| ||||||||||| ||||||    
T  892684 tcacaattataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaaatacattaattattcaatgaatctaa 892585  T
Q  163 aaagttaagttttgcttataata 185  Q
    ||||| || ||||||||||||||    
T  892584 aaagtgaatttttgcttataata 892562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 6834089 - 6834036
Alignment:
Q  137 atacattgattattcaatgtatctaaaaagttaagttttgcttataataatgac 190  Q
    ||||||| |||||||||| |||||||||||| || |||| ||||||||||||||    
T  6834089 atacattaattattcaatatatctaaaaagtaaaattttacttataataatgac 6834036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 1098765 - 1098639
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||||||||||| |||| |||| |||||||||  ||| ||| | |||||||| || ||| || ||||||| | ||||||   ||||| |||| |    
T  1098765 tccggtcactattataagcaaaagtttattttttagattcatttaataaataatgtatgtagtctata-tatagaccacatacatcatttattgaatgaa 1098667  T
Q  158 tctaaaaagttaagttttgcttataata 185  Q
    |||||||||| || |||| |||||||||    
T  1098666 tctaaaaagtcaacttttacttataata 1098639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 2673956 - 2673845
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataa 186  Q
    ||||||||| |||| ||| | | ||| || || ||| |||||||||| | ||||||   ||||| |||||| ||||||||| ||  |||||||||||||     
T  2673956 tttttagatttattcaataaatgatgcatgtagtctatattatagaccacatacatcatttattgaatgtacctaaaaagtcaaaatttgcttataatag 2673857  T
Q  187 tgaccgaaggaa 198  Q
    ||||||||||||    
T  2673856 tgaccgaaggaa 2673845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 14509967 - 14509896
Alignment:
Q  50 gtacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatc 121  Q
    |||||||||||| ||||  |||||| |||||  | | |||||||||||||||||| ||||||||||| ||||    
T  14509967 gtacttcatccggtcacatttataaataaaaaataattttttagatatattgaataattaatgtatccaatc 14509896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 20502152 - 20502089
Alignment:
Q  135 agatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccgaaggaa 198  Q
    ||||||||| ||||||| ||| ||||||||||| || |||| |||||||||| ||||| |||||    
T  20502152 agatacattaattattctatgaatctaaaaagtcaactttttcttataataaggaccggaggaa 20502089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 21090445 - 21090406
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagttaa 170  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  21090445 gactagatacatacattattcaatgtatctaaaaagttaa 21090406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 13103509 - 13103432
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaa 165  Q
    |||||| ||||||| ||| |||||||||||||||||| ||| || | |||||||| | |||||||| ||||| ||||||    
T  13103509 tttttaaatatatttaataattaatgtatctaatcttcattgtaaattagataca-taattattcattgtatttaaaaa 13103432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 28351024 - 28351090
Alignment:
Q  136 gatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccgaaggaaatac 202  Q
    ||||||||  |||||||||| ||||||||||||   ||||||||||||  ||||||| |||||||||    
T  28351024 gatacattagttattcaatgaatctaaaaagttgttttttgcttataaatatgaccggaggaaatac 28351090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 28499813 - 28499895
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagtta 169  Q
    |||||||||  ||||||| | |||||||||   || | |||||||| || ||||||| |||||||||| ||||||||||||||    
T  28499813 tttttagattcattgaataactaatgtatccggtcataattatagattaaatacattaattattcaatatatctaaaaagtta 28499895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 197
Target Start/End: Complemental strand, 35969267 - 35969127
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgatta--ttcaatg 155  Q
    ||||||||||| ||||||||||| || |||||||||||| ||| ||| | |  ||||| || |||||||||||  | | ||||| | ||||  || ||||    
T  35969267 tccgatcactaatataagtaaaaattcactttttagatacattcaattaatggtgtatgtagtctttattatatgccacataca-tcattaatttgaatg 35969169  T
Q  156 tatctaaaaagttaagttttgcttataataatgaccgaagga 197  Q
    ||||||||||||  | ||||||||||| || |||||| ||||    
T  35969168 tatctaaaaagtggatttttgcttatattagtgaccggagga 35969127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 1643374 - 1643459
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||||||  ||| |||||| | || |  ||| | ||||||||||||  |||||| ||||||||||||||||    
T  1643374 tttactttttagatacattgaaaaatttatgtatttgatttagattcttgactagatacatacattattgaatgtatctaaaaagt 1643459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 37699898 - 37699813
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||||||| ||| |||||| |  | |   || | ||||||||||||  |||||||||||||||||||||||    
T  37699898 tttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 37699813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 7065664 - 7065712
Alignment:
Q  135 agatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    ||||||||| ||||||||||| || ||||||||| | ||||||||||||    
T  7065664 agatacattaattattcaatgaatttaaaaagttgatttttgcttataa 7065712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 7749997 - 7750033
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  7749997 gactagatacatacattattcaatgtatctaaaaagt 7750033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 7945916 - 7945952
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  7945916 gactagatacatacattattcaatgtatctaaaaagt 7945952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 9601662 - 9601626
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  9601662 gactagatacatacattattcaatgtatctaaaaagt 9601626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 14338897 - 14338933
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaa 170  Q
    |||||||||  ||||||||||||||||||||||||||    
T  14338897 tagatacataaattattcaatgtatctaaaaagttaa 14338933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 22398156 - 22398072
Alignment:
Q  85 actttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagtta 169  Q
    |||||||||||  ||||||| |||||||||| |  || |  |||||||||| ||||| | ||||||||||  |||||||||||||    
T  22398156 actttttagattcattgaataattaatgtatttggtcatatttatagactatatacaataattattcaataaatctaaaaagtta 22398072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 30132894 - 30132850
Alignment:
Q  148 attcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||| ||||||||||||||||| |||| |||||||||| |||||    
T  30132894 attcattgtatctaaaaagttaattttttcttataataaggaccg 30132850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 38370525 - 38370441
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacat 142  Q
    |||| |||||||| |||||||||||||   ||||| || |||| ||| | | |||||| | ||||||||||||||||| ||||||    
T  38370525 tccggtcactattgtaagtaaaactttgtattttatatttatttaattaatgatgtatatgatctttattatagactacatacat 38370441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 41989643 - 41989679
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  41989643 gactagatacatacattattcaatgtatctaaaaagt 41989679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 7e-28; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 50335065 - 50334923
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattatt 150  Q
    |||||| |||| ||||||||||||| |||| |||| |||||||||||||||||| ||||||||||  || || || || ||| |||||||||| ||||||    
T  50335065 tacttcctccggtcactattataagcaaaa-tttattttttagatatattgaataattaatgtatacaacctataataaagattagatacattaattatt 50334967  T
Q  151 caatgtatctaaaaagttaagttttgcttataataatgaccgaa 194  Q
    |||||||||||||| || |||||||| |||||||| | ||||||    
T  50334966 caatgtatctaaaatgtgaagttttgtttataatattaaccgaa 50334923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 50334932 - 50335062
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaag 166  Q
    ||||||||  ||||||| || ||||||||| ||||||| ||||||||||||||||||||||||||  |  ||||||| |||||||||| ||||||||||     
T  50334932 tattataaacaaaacttcacattttagatacattgaataattaatgtatctaatctttattataggttgtatacattaattattcaatatatctaaaaa- 50335030  T
Q  167 ttaagttttgcttataataatgaccgaaggaa 198  Q
     ||| |||||||||||||| |||||| |||||    
T  50335031 ataaattttgcttataatagtgaccggaggaa 50335062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 35239786 - 35239682
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    ||||||||||||  |||| || || ||||||||| |||||||  |||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||    
T  35239786 tcactattataaccaaaatttgacattttagatacattgaatagttaatgtatctagtctttattatagacttaatacattaattattcaatgtatctaa 35239687  T
Q  163 aaagt 167  Q
    |||||    
T  35239686 aaagt 35239682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 29497472 - 29497371
Alignment:
Q  84 tactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    ||||||||||||| ||||||  |||||| |||||| |||||||| ||||||  ||||||| |||| |||||||||||||||||| || ||||||||||||    
T  29497472 tactttttagatacattgaacaattaatatatctagtctttattgtagactgaatacattaattagtcaatgtatctaaaaagtaaaattttgcttataa 29497373  T
Q  184 ta 185  Q
    ||    
T  29497372 ta 29497371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 35239682 - 35239791
Alignment:
Q  85 actttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataat 184  Q
    |||||||||||| ||||||| ||||||||||  | ||| || || |||||||||||||| | |||||||||||||||||| || || ||||| |||||||    
T  35239682 actttttagatacattgaataattaatgtattaagtctataataaagactagatacattaactattcaatgtatctaaaatgtcaaattttggttataat 35239781  T
Q  185 aatgaccgaa 194  Q
    | ||||||||    
T  35239782 agtgaccgaa 35239791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 167
Target Start/End: Original strand, 29497362 - 29497471
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||||| ||||||||||| |||| ||||||||||||||| ||||| | ||||||||||  | |||  | || |||||||||| ||| ||| |||||||||    
T  29497362 tccgattactattataagcaaaattttactttttagatacattgactaattaatgtattcagtctacaataaagactagatatattaattgttcaatgta 29497461  T
Q  158 tctaaaaagt 167  Q
    ||||||||||    
T  29497462 tctaaaaagt 29497471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 48748536 - 48748640
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa--aaagttaagttttgcttataat 184  Q
    |||||||||||||| ||| |||||| ||| |||| ||||||||| |||||||||||| |||||||||| ||| |||  ||| | |||||||| |||||||    
T  48748536 tttttagatatattaaataattaatatatttaatatttattataaactagatacattaattattcaatatatttaaataaaataaagttttgattataat 48748635  T
Q  185 aatga 189  Q
    |||||    
T  48748636 aatga 48748640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 53711863 - 53711994
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||||||| |||||||||||||| || |||||||| |||  || ||| |||||||||| | ||||||  |||||||||||||| || |||||||||| ||    
T  53711863 tccgatcattattataagtaaaatttcactttttaaatactttaaataattaatgtatttgatctttcatatagactagatacgttaattattcaatata 53711962  T
Q  158 tctaaaaagttaagttttgcttataataatgac 190  Q
    | |||||| |||| |||| ||||| ||| ||||    
T  53711963 tataaaaa-ttaaattttacttatgatagtgac 53711994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 12744903 - 12745041
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||||||||||| ||||  |||| ||||||||  ||| ||| | | |||||| |  |||||||||||||| | ||||||   ||| | ||||||    
T  12744903 tccggtcactattataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgta 12745002  T
Q  158 tctaaaaagttaagttttgcttataataatgaccgaagg 196  Q
    ||||||| ||||| |||||||||||||| ||||||||||    
T  12745003 tctaaaatgttaatttttgcttataatagtgaccgaagg 12745041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 189
Target Start/End: Complemental strand, 53711993 - 53711868
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    ||||||| |||||||||| |||| |||||| ||||||||||| ||||| ||||||| ||| ||| | |||  | ||||||| |||||| || |||| |||    
T  53711993 tcactatcataagtaaaa-tttaatttttatatatattgaataattaacgtatctagtctatatgaaagatcaaatacattaattatttaaagtatttaa 53711895  T
Q  163 aaagttaagttttgcttataataatga 189  Q
    ||||| || |||| |||||||||||||    
T  53711894 aaagtgaaattttacttataataatga 53711868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 32186891 - 32186992
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||| ||||||  |||| || |||||||| ||| || |||| |||||||||| || ||||||||||| |||||||||||| ||||| |||||||    
T  32186891 tccggtcactgttataaacaaaatttcactttttaaatacatggaataattaatgtatatagtctttattataaactagatacattaattatccaatgta 32186990  T
Q  158 tc 159  Q
    ||    
T  32186991 tc 32186992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 17275365 - 17275417
Alignment:
Q  67 tattataagtaaaactttactttttagatatattgaatgattaatgtatctaa 119  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  17275365 tattataagtaaaattttacattttagatatattgaatgactaatgtatctaa 17275417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 26389443 - 26389490
Alignment:
Q  107 ttaatgtatctaatctttattatagactagatacattgattattcaat 154  Q
    |||||||||||| | |||||||||||||||||||||| ||||||||||    
T  26389443 ttaatgtatctagtatttattatagactagatacattaattattcaat 26389490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 27302229 - 27302087
Alignment:
Q  50 gtacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattat 149  Q
    ||||||| |||| ||  ||||||||| |||| || ||||||||| |  || |||| |||||||||||||||  | | ||||||||||||||||   ||||    
T  27302229 gtacttcctccggtctttattataagaaaaagttgactttttaggttcatagaataattaatgtatctaattgtaaatatagactagatacatcacttat 27302130  T
Q  150 tcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
     ||||| | | |||||||||| | || |||||||||| |||||    
T  27302129 acaatgaaccaaaaaagttaattctttcttataataaagaccg 27302087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 8243800 - 8243715
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||||||| ||| |||||| |  | |  ||| | ||||||||||||  |||||||||||||||||||||||    
T  8243800 tttactttttagatacattgaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaagt 8243715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 42912432 - 42912375
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaa 119  Q
    |||||||||||||||||| ||||||| ||||||    |||||||||| ||||||||||||||    
T  42912432 tccgatcactattataagcaaaacttcactttt----tatattgaataattaatgtatctaa 42912375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 32186992 - 32186893
Alignment:
Q  93 gatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||| |||| || ||||||||||||| | | || || |||||| ||||||| ||||||| |||||| |||||||| || ||||| |||||| | ||||||    
T  32186992 gatacattggataattaatgtatctagtttataataaagactatatacattaattattccatgtatttaaaaagtgaaattttgtttataacagtgaccg 32186893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 6087019 - 6086934
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||||||| ||| |||||| |  | |   || | ||||||||||||  |||||||||||||||||||||||    
T  6087019 tttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 6086934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 9440246 - 9440161
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||||||| ||| |||||| |  | |   || | ||||||||||||  |||||||||||||||||||||||    
T  9440246 tttactttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatacattattcaatgtatctaaaaagt 9440161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 10049698 - 10049783
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||||||| ||| |||||| |  | |   || | ||||||||||||  |||||||||||||||||||||||    
T  10049698 tttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 10049783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 39964364 - 39964299
Alignment:
Q  127 tatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||||| ||||||   |||||||||| |||||||||||    |||||||||||||||||||||    
T  39964364 tatagactacatacataatttattcaatgaatctaaaaagtagttttttgcttataataatgaccg 39964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 42225636 - 42225587
Alignment:
Q  126 ttatagactagatacattgattattcaatgtatctaaaaagttaagtttt 175  Q
    |||| ||||||||||||  ||||||||||||||||||||| |||| ||||    
T  42225636 ttattgactagatacatacattattcaatgtatctaaaaaattaattttt 42225587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 42912385 - 42912352
Alignment:
Q  152 aatgtatctaaaaagttaagttttgcttataata 185  Q
    |||||||||||||||| |||||||||||||||||    
T  42912385 aatgtatctaaaaagtgaagttttgcttataata 42912352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 335444 - 335408
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  335444 gactagatacatacattattcaatgtatctaaaaagt 335408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 379152 - 379188
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  379152 gactagatacataaattattcaatgtatctaaaaagt 379188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 9190107 - 9190143
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  9190107 gactagatacatacattattcaatgtatctaaaaagt 9190143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 9465140 - 9465104
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  9465140 gactagatacatacattattcaatgtatctaaaaagt 9465104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 23825228 - 23825264
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  23825228 gactagatacatacattattcaatgtatctaaaaagt 23825264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 24596989 - 24596893
Alignment:
Q  98 attgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccgaa 194  Q
    ||||||| | |||||||| ||||||  |||||| |  | |||||| | ||||| |||| |||||||| || || |||| ||||||||||||||||||    
T  24596989 attgaataaataatgtatataatctacattataaatcacatacatcgtttattgaatgaatctaaaatgtaaatttttacttataataatgaccgaa 24596893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 26123069 - 26123105
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  26123069 gactagatacatacattattcaatgtatctaaaaagt 26123105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 26999100 - 26999136
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  26999100 gactagatacatacattattcaatgtatctaaaaagt 26999136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 29019814 - 29019850
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  29019814 gactagatacatatattattcaatgtatctaaaaagt 29019850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 29241570 - 29241618
Alignment:
Q  146 ttattcaatgtatctaaaaagttaagttttgcttataataatgaccgaa 194  Q
    ||||| |||| |||||||||||| | ||| |||||||||||||||||||    
T  29241570 ttattgaatgaatctaaaaagttgattttggcttataataatgaccgaa 29241618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 32759102 - 32759062
Alignment:
Q  60 cgatcactattataagtaaaactttactttttagatatatt 100  Q
    ||||||||| ||||| ||||| |||||||||||||||||||    
T  32759102 cgatcactaatataaataaaaatttactttttagatatatt 32759062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 36344574 - 36344518
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgta 114  Q
    |||||||| ||||||||  |||| | ||||||||||||| ||||||| |||||||||    
T  36344574 tccgatcaatattataaacaaaattatactttttagatacattgaataattaatgta 36344518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 40215017 - 40214933
Alignment:
Q  83 ttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    |||||||||||||| ||| ||| ||| |||||| | || |  ||| | ||||||||||||  ||||| |||||||||||||||||    
T  40215017 ttactttttagatacattaaataatttatgtatttgatttagattcttgactagatacatacattatccaatgtatctaaaaagt 40214933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 48593255 - 48593175
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    |||||||||  ||||||| ||| |||||| |  ||| |||| |||||  |||||||  |||||||||||||||||||||||    
T  48593255 tttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatgtatctaaaaagt 48593175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 49123023 - 49123059
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  49123023 gactagatacatacattattcaatgtatctaaaaagt 49123059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 8996891 - 8996792
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||||||||||| |||||| |||||| |||||| ||||||| || ||||||| || |||||||||||||||||||||||| |||||||||||||    
T  8996891 tccggtcactattataagcaaaactctactttctagatacattgaataatcaatgtatatagtctttattatagactagatacattaattattcaatgta 8996792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 185
Target Start/End: Original strand, 8717509 - 8717638
Alignment:
Q  58 tccgatcactattataagtaaaactttacttttt--agatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatg 155  Q
    ||||||||||||||||||||||| || | |||||  ||||| ||| ||| |||||||||| || ||||||||||| ||||||||||||  ||||||||||    
T  8717509 tccgatcactattataagtaaaatttaattttttttagatacattaaataattaatgtatttagtctttattatatactagatacattatttattcaatg 8717608  T
Q  156 tatctaaaaagttaagttttgcttataata 185  Q
    ||| |||||| |||| |||  |||||||||    
T  8717609 tatttaaaaaattaaatttaacttataata 8717638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 8996795 - 8996889
Alignment:
Q  98 attgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    ||||||| ||||||||||||| ||| || || |||||| ||||||||||||||||||||||||| |||||  |||||||||||||||| ||||||    
T  8996795 attgaataattaatgtatctagtctataataaagactatatacattgattattcaatgtatctagaaagtagagttttgcttataatagtgaccg 8996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 13953776 - 13953902
Alignment:
Q  67 tattataagtaaaactttactttt-tagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaa 165  Q
    ||||||||| |||| |||| |||| |||||||||| ||| |||| | ||| || ||||||||||| | |||||| |||||||||  |||||||||||||     
T  13953776 tattataagcaaaattttatttttttagatatattaaataattagtctatatagtctttattataaattagatatattgattatctaatgtatctaaaat 13953875  T
Q  166 gttaagttttgcttataataatgaccg 192  Q
    || |||||||| |||||||| ||||||    
T  13953876 gtgaagttttgtttataatagtgaccg 13953902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 14094983 - 14095109
Alignment:
Q  67 tattataagtaaaactttactttt-tagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaa 165  Q
    ||||||||| |||| |||| |||| |||||||||| ||| |||| | ||| || ||||||||||| | |||||| |||||||||  |||||||||||||     
T  14094983 tattataagcaaaattttatttttttagatatattaaataattagtctatatagtctttattataaattagatatattgattatctaatgtatctaaaat 14095082  T
Q  166 gttaagttttgcttataataatgaccg 192  Q
    || |||||||| |||||||| ||||||    
T  14095083 gtgaagttttgtttataatagtgaccg 14095109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 196
Target Start/End: Complemental strand, 43100874 - 43100749
Alignment:
Q  65 actattataagtaaaacttt-actttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaa 163  Q
    ||||||||||| |||| ||| |||||||| ||| |||||||||| ||| |||||| ||||||||||||      || ||| |||||||||||||||||||    
T  43100874 actattataagcaaaaatttcactttttaaatacattgaatgat-aatatatctagtctttattatag------tatattaattattcaatgtatctaaa 43100782  T
Q  164 aagttaagttttgcttataataatgaccgaagg 196  Q
    || | || |||||||||||||| ||||||||||    
T  43100781 aaatgaatttttgcttataatagtgaccgaagg 43100749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 58 - 165
Target Start/End: Complemental strand, 8717647 - 8717540
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    ||||||||||||||||||| ||| || | |||||| ||| ||||||| | ||||||||||| | | || || |||||| ||||||| |||||| ||||||    
T  8717647 tccgatcactattataagttaaatttaattttttaaatacattgaataaataatgtatctagtatataataaagactaaatacattaattatttaatgta 8717548  T
Q  158 tctaaaaa 165  Q
    ||||||||    
T  8717547 tctaaaaa 8717540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 55 - 192
Target Start/End: Original strand, 42530491 - 42530628
Alignment:
Q  55 tcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaat 154  Q
    ||||||| |||||||||||||||||| ||||| ||||||||  ||| ||| | || |||||    |||||||||||||| | |||||| | ||| | |||    
T  42530491 tcatccggtcactattataagtaaaaatttacattttagattcatttaattaatattgtatacggtctttattatagacaatatacatcgtttaatgaat 42530590  T
Q  155 gtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    | || ||||| ||||| |||||||||||||| ||||||    
T  42530591 gaatgtaaaatgttaatttttgcttataatagtgaccg 42530628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 45065698 - 45065613
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||| ||| ||| |||||| |||| |  ||| ||||||||||||||  |||||||||||||||||||||||    
T  45065698 tttactttttagatacattaaataatttatgtatttaatttagattctagactagatacatacattattcaatgtatctaaaaagt 45065613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 10495789 - 10495721
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaa 119  Q
    ||||||||||| ||||||||||||| |||| || |||||||||||| |||||||  |||||||||||||    
T  10495789 tacttcatccggtcactattataagcaaaatttcactttttagatacattgaatatttaatgtatctaa 10495721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 25903797 - 25903722
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    |||||||||| ||| ||| ||||||||||||| |||| ||| || || ||||||||| ||||||||||||||||||    
T  25903797 tttttagatacatttaataattaatgtatctactcttcattgtaaacgagatacattaattattcaatgtatctaa 25903722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 39792145 - 39792204
Alignment:
Q  106 attaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaa 165  Q
    ||||||||||||| | ||||||||||| |||||||||| |||||||| ||||||||||||    
T  39792145 attaatgtatctagtttttattatagattagatacattaattattcattgtatctaaaaa 39792204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 10495722 - 10495780
Alignment:
Q  134 tagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgaccg 192  Q
    |||||||||| | ||||||||||||||||||||| || |||||||||||||| ||||||    
T  10495722 tagatacattaaatattcaatgtatctaaaaagtgaaattttgcttataatagtgaccg 10495780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 15119915 - 15119777
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||||||||||| |||| | ||| |||||||| |||| | | | | |||||| |  |||||||||||||| | ||||||   ||| | |||| |    
T  15119915 tccggtcactattataagcaaaaatctacattttagatttattcatttaatgatgtatattgtctttattatagaccacatacatcatttaatgaatgaa 15119816  T
Q  158 tctaaaaagttaagttttgcttataataatgaccgaagg 196  Q
    ||||||| ||||| |||||||||||||| ||||||||||    
T  15119815 tctaaaatgttaatttttgcttataatagtgaccgaagg 15119777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 1961311 - 1961444
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||||||||||||||||| |||| ||||| |||||||| | || ||| | | |||||| |  |||||||||||||| | ||||||   ||| | |||| |    
T  1961311 tccgatcactattataagcaaaaatttacattttagatttgtttaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaa 1961410  T
Q  158 tctaaaaagttaagttttgcttataataatgacc 191  Q
    ||||||| ||| | |||||||||||||| |||||    
T  1961411 tctaaaatgttgatttttgcttataatagtgacc 1961444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 8996791 - 8996734
Alignment:
Q  128 atagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataata 185  Q
    |||||||||||||||| |||||||||||||||||||||   || ||||||||||||||    
T  8996791 atagactagatacattaattattcaatgtatctaaaaaccgaaattttgcttataata 8996734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 189
Target Start/End: Original strand, 2050089 - 2050223
Alignment:
Q  55 tcatccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaat 154  Q
    ||||||||||||||||||||| ||||||||   |||||||| |||| | | | | |||||| | |||||||||||| || | ||||||   ||| | |||    
T  2050089 tcatccgatcactattataagcaaaactttttattttagatttatttatttaatgatgtatatgatctttattataaaccacatacatcatttaataaat 2050188  T
Q  155 gtatctaaaaagttaagttttgcttataataatga 189  Q
    | ||||||||    |||||||||||||||||||||    
T  2050189 gaatctaaaataaaaagttttgcttataataatga 2050223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 6761495 - 6761580
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||||||| ||| |||||| |  | | | || | ||||||||||||  |||||||||||||||||||||||    
T  6761495 tttactttttagatacattgaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgtatctaaaaagt 6761580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 192
Target Start/End: Original strand, 23377949 - 23378078
Alignment:
Q  63 tcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaa 162  Q
    |||||||||| ||||||||||| | ||||||||  ||| ||| | | |||||| | ||||||||| ||||  | ||||||   ||| | |||| ||||||    
T  23377949 tcactattattagtaaaactttgcattttagattcattcaattaatgatgtatatgatctttattgtagatcacatacatcatttaataaatgaatctaa 23378048  T
Q  163 aaagttaagttttgcttataataatgaccg 192  Q
    ||  |||| |||||||||||||||||||||    
T  23378049 aatattaatttttgcttataataatgaccg 23378078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 190
Target Start/End: Complemental strand, 4860372 - 4860245
Alignment:
Q  62 atcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatcta 161  Q
    ||||||| |||||| |||| | || ||||||||| |||| ||||| ||||||||||  | | ||| |||||| ||||||||   |||||||||| ||||     
T  4860372 atcactaatataagcaaaaatctattttttagatttattaaatgactaatgtatctggtttatat-atagaccagatacatcagttattcaatgaatctg 4860274  T
Q  162 aaaagttaagttttgcttataataatgac 190  Q
    ||||  ||| |||||||||||||| ||||    
T  4860273 aaaatgtaaattttgcttataatagtgac 4860245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 8996725 - 8996785
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatcta 118  Q
    |||||||||||||||||| |||| ||   |||||||||| ||||||| |||||||||||||    
T  8996725 tccgatcactattataagcaaaatttcggtttttagatacattgaataattaatgtatcta 8996785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 39792204 - 39792136
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatg 155  Q
    |||||||||| | ||||| ||||||||||||||||| || || | |||||||||||| |||||| ||||    
T  39792204 tttttagatacaatgaataattaatgtatctaatctataataaaaactagatacattaattatttaatg 39792136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 20555334 - 20555275
Alignment:
Q  124 tattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    |||| ||||| ||||||||  ||||||||||||||||||||| |||| |||| |||||||    
T  20555334 tattctagacaagatacatcaattattcaatgtatctaaaaaattaattttttcttataa 20555275  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 20218614 - 20218680
Alignment:
Q  124 tattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataataatgac 190  Q
    ||||||||||| |||||||  ||||||||||| ||||||||||| |  | |||||||||||| ||||    
T  20218614 tattatagactggatacatcaattattcaatgaatctaaaaagtgatttcttgcttataatagtgac 20218680  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 16241385 - 16241300
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||||||| ||| |||||| |  | |   || | ||||||||||||  |||||||||||||||||||||||    
T  16241385 tttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagt 16241300  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 20427031 - 20427116
Alignment:
Q  82 tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||||| ||| ||| ||| |||||| | || |   || | ||||||||||||  |||||||||||||||||||||||    
T  20427031 tttactttttagatagattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaagt 20427116  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 167
Target Start/End: Original strand, 20504245 - 20504354
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| |||||| |||||  |||| | ||||||||||||||||| ||| | | |||||| ||||||||||||||   || ||||||   | ||| ||||||    
T  20504245 tccggtcactaatataaacaaaaatctactttttagatatattcaattaatgatgtatataatctttattatatgttatatacatcattaattgaatgta 20504344  T
Q  158 tctaaaaagt 167  Q
    ||||||||||    
T  20504345 tctaaaaagt 20504354  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 41805276 - 41805409
Alignment:
Q  58 tccgatcactattataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgta 157  Q
    |||| ||||||||||||| |||| ||| | ||||| ||  ||| ||| | | |||||| || |||||||||||||| | ||||||   ||| | | || |    
T  41805276 tccggtcactattataagcaaaattttgcattttaaattcattcaattaatgatgtatatagtctttattatagaccatatacatcatttaatgagtgaa 41805375  T
Q  158 tctaaaaagttaagttttgcttataataatgacc 191  Q
    ||||||| |  |||||||||||||||||||||||    
T  41805376 tctaaaatgcaaagttttgcttataataatgacc 41805409  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 45472405 - 45472446
Alignment:
Q  51 tacttcatccgatcactattataagtaaaactttacttttta 92  Q
    |||| ||| ||||||||||||||||||||| |||||||||||    
T  45472405 tactccattcgatcactattataagtaaaaatttacttttta 45472446  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 1944603 - 1944567
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  1944603 gactagatacatacattattcaatgtatctaaaaagt 1944567  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 2100096 - 2100132
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  2100096 gactagatacatacattattcaatgtatctaaaaagt 2100132  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 7765863 - 7765827
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  7765863 gactagatacatacattattcaatgtatctaaaaagt 7765827  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 205
Target Start/End: Complemental strand, 7833412 - 7833277
Alignment:
Q  70 tataagtaaaactttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagtta 169  Q
    |||||| || |||| | ||||||||| |||| |||  ||||||||||| |||| |||| || |  ||||||||  ||||||||||| ||||||||| ||     
T  7833412 tataagaaacacttaattttttagatttattaaatagttaatgtatctgatctatattttaaatcagatacatcaattattcaatgaatctaaaaaattg 7833313  T
Q  170 agttttgcttata-ataatgaccgaaggaaatacttg 205  Q
    | | || |||||| |||| ||||||||||| ||||||    
T  7833312 attgtttcttatatataa-gaccgaaggaagtacttg 7833277  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 11711393 - 11711357
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  11711393 gactagatacatacattattcaatgtatctaaaaagt 11711357  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 20360523 - 20360559
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  20360523 gactagatacatacattattcaatgtatctaaaaagt 20360559  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 29168579 - 29168627
Alignment:
Q  135 agatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    ||||||||| |||||| ||||||| ||||||||||  ||||||||||||    
T  29168579 agatacattaattatttaatgtatttaaaaagttattttttgcttataa 29168627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 32750411 - 32750375
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  32750411 gactagatacatacattattcaatgtatctaaaaagt 32750375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 119
Target Start/End: Complemental strand, 33956395 - 33956363
Alignment:
Q  87 tttttagatatattgaatgattaatgtatctaa 119  Q
    |||||||||||||||||| ||||||||||||||    
T  33956395 tttttagatatattgaataattaatgtatctaa 33956363  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 36881598 - 36881550
Alignment:
Q  135 agatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    ||||||||| |||| |||||||||||||||||| || |||| |||||||    
T  36881598 agatacattaattactcaatgtatctaaaaagtcaaatttttcttataa 36881550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 43657994 - 43657958
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  43657994 gactagatacatacattattcaatgtatctaaaaagt 43657958  T

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Target: scaffold0194 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 165
Target Start/End: Original strand, 20149 - 20188
Alignment:
Q  126 ttatagactagatacattgattattcaatgtatctaaaaa 165  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  20149 ttatagactagatacattgattattcaatgaatctgaaaa 20188  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 33971 - 34014
Alignment:
Q  152 aatgtatctaaaaagttaagttttgcttataataatgaccgaag 195  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||    
T  33971 aatgtatctaaaaagtgaagttttgcttgtaataatgacagaag 34014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 184
Target Start/End: Complemental strand, 36565 - 36438
Alignment:
Q  58 tccgatcactattataagtaaaac--tttactttttagatatattgaatgattaatgtatctaatctttattatagactagatacattgattattcaatg 155  Q
    |||||||||||||||||||||||   | || ||||||| | |||||||| || ||||||| |||||| |||||||||| |  |||||  || || |||||    
T  36565 tccgatcactattataagtaaaaaaatgta-tttttaggtttattgaataatgaatgtatttaatctatattatagacaaagtacataaatcatccaatg 36467  T
Q  156 tatctaaaaagttaagttttgcttataat 184  Q
     | |||||||||  | |||||||||||||    
T  36466 aacctaaaaagtggatttttgcttataat 36438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 522 - 558
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  522 gactagatacatacattattcaatgtatctaaaaagt 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 458 - 494
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  458 gactagatacatacattattcaatgtatctaaaaagt 494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 29323 - 29359
Alignment:
Q  131 gactagatacattgattattcaatgtatctaaaaagt 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  29323 gactagatacatacattattcaatgtatctaaaaagt 29359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 320714 - 320798
Alignment:
Q  99 ttgaatgattaatgtatctaatctttattatagactagatacattgattattcaatgtatctaaaaagttaagttttgcttataa 183  Q
    |||||| | |||||||||||||| |  ||||| || ||||| |||  ||||| |||| ||||||||||||  |||||||||||||    
T  320714 ttgaataactaatgtatctaatcctatttataaaccagatatattagttatttaatgaatctaaaaagttgtgttttgcttataa 320798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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