View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19670_low_14 (Length: 250)

Name: NF19670_low_14
Description: NF19670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19670_low_14
NF19670_low_14
[»] chr6 (33 HSPs)
chr6 (133-234)||(8039142-8039243)
chr6 (131-222)||(9726007-9726106)
chr6 (131-198)||(25927349-25927417)
chr6 (131-198)||(15466355-15466422)
chr6 (17-76)||(8039302-8039361)
chr6 (131-198)||(21907417-21907485)
chr6 (137-194)||(27737739-27737797)
chr6 (130-198)||(11176934-11177003)
chr6 (138-198)||(17729144-17729205)
chr6 (138-198)||(21672481-21672542)
chr6 (131-198)||(8241262-8241330)
chr6 (131-177)||(22567825-22567871)
chr6 (138-234)||(23143714-23143818)
chr6 (131-234)||(7542963-7543074)
chr6 (138-198)||(12183377-12183438)
chr6 (141-197)||(14079491-14079548)
chr6 (131-195)||(19244570-19244635)
chr6 (138-198)||(21679897-21679958)
chr6 (136-196)||(21932100-21932161)
chr6 (157-198)||(34478536-34478577)
chr6 (131-198)||(20005925-20005993)
chr6 (147-223)||(25781796-25781875)
chr6 (131-189)||(20722232-20722290)
chr6 (157-222)||(23645782-23645855)
chr6 (141-194)||(5624635-5624689)
chr6 (157-198)||(17299877-17299919)
chr6 (147-234)||(9516786-9516881)
chr6 (131-180)||(9899024-9899073)
chr6 (137-233)||(17883789-17883892)
chr6 (138-198)||(18075434-18075495)
chr6 (139-198)||(20145106-20145166)
chr6 (139-198)||(22187673-22187733)
chr6 (131-198)||(28933706-28933774)
[»] chr5 (29 HSPs)
chr5 (131-234)||(18208252-18208362)
chr5 (131-198)||(24267001-24267068)
chr5 (131-198)||(24343632-24343699)
chr5 (130-198)||(26121370-26121438)
chr5 (131-198)||(28253265-28253333)
chr5 (131-198)||(15544035-15544103)
chr5 (130-189)||(26110517-26110576)
chr5 (135-181)||(15469925-15469971)
chr5 (131-234)||(17431868-17431979)
chr5 (148-234)||(34487640-34487733)
chr5 (131-181)||(18937733-18937783)
chr5 (136-198)||(36175124-36175186)
chr5 (131-222)||(22755506-22755605)
chr5 (131-198)||(19283901-19283969)
chr5 (131-199)||(20534098-20534166)
chr5 (131-194)||(24167634-24167698)
chr5 (140-234)||(25550507-25550609)
chr5 (131-189)||(19086234-19086293)
chr5 (142-189)||(32417411-32417458)
chr5 (145-198)||(19004272-19004326)
chr5 (131-181)||(20744875-20744925)
chr5 (131-181)||(24662214-24662264)
chr5 (131-194)||(15375932-15375997)
chr5 (131-179)||(17769461-17769510)
chr5 (158-198)||(34128648-34128689)
chr5 (131-187)||(9520999-9521055)
chr5 (131-198)||(17171599-17171667)
chr5 (141-181)||(20419951-20419991)
chr5 (131-198)||(24852218-24852286)
[»] chr7 (51 HSPs)
chr7 (138-234)||(2563810-2563913)
chr7 (131-198)||(7318258-7318326)
chr7 (131-197)||(5047434-5047501)
chr7 (131-198)||(9574392-9574460)
chr7 (139-198)||(10587070-10587130)
chr7 (131-198)||(7397181-7397248)
chr7 (139-224)||(5108559-5108651)
chr7 (133-194)||(9864376-9864438)
chr7 (131-223)||(23099966-23100066)
chr7 (129-198)||(31492913-31492983)
chr7 (130-198)||(5797495-5797564)
chr7 (131-187)||(14196030-14196086)
chr7 (139-198)||(15869588-15869648)
chr7 (131-198)||(16306679-16306747)
chr7 (142-198)||(23093306-23093362)
chr7 (142-198)||(26134794-26134850)
chr7 (130-198)||(9890166-9890236)
chr7 (131-181)||(19153283-19153333)
chr7 (131-181)||(20752682-20752732)
chr7 (138-198)||(2350793-2350854)
chr7 (131-198)||(3734581-3734649)
chr7 (137-181)||(4986546-4986590)
chr7 (137-181)||(4990644-4990688)
chr7 (138-198)||(6042453-6042513)
chr7 (142-198)||(15303667-15303723)
chr7 (131-234)||(17203009-17203119)
chr7 (133-234)||(4579085-4579193)
chr7 (131-178)||(5530006-5530053)
chr7 (145-234)||(8054492-8054589)
chr7 (136-187)||(9130896-9130947)
chr7 (131-174)||(12329667-12329710)
chr7 (131-181)||(1584530-1584579)
chr7 (131-181)||(1587666-1587716)
chr7 (145-198)||(8054104-8054158)
chr7 (131-177)||(9500429-9500475)
chr7 (138-234)||(9731630-9731734)
chr7 (131-181)||(14755194-14755244)
chr7 (131-222)||(18449226-18449326)
chr7 (131-181)||(18495358-18495408)
chr7 (131-223)||(18662426-18662526)
chr7 (131-234)||(1872770-1872881)
chr7 (131-176)||(1882354-1882399)
chr7 (157-198)||(2953584-2953625)
chr7 (142-198)||(10937598-10937655)
chr7 (131-180)||(16365690-16365739)
chr7 (130-198)||(21230296-21230365)
chr7 (155-198)||(8313441-8313485)
chr7 (131-194)||(8979056-8979120)
chr7 (146-194)||(9866591-9866639)
chr7 (131-198)||(11221210-11221278)
chr7 (131-198)||(17153200-17153268)
[»] chr4 (35 HSPs)
chr4 (131-234)||(19882625-19882736)
chr4 (131-234)||(25121229-25121339)
chr4 (131-198)||(9052659-9052726)
chr4 (130-234)||(13692672-13692784)
chr4 (131-198)||(14648880-14648948)
chr4 (131-181)||(9737573-9737623)
chr4 (146-234)||(13908854-13908950)
chr4 (131-234)||(21323878-21323989)
chr4 (131-198)||(17671987-17672055)
chr4 (131-192)||(15050135-15050197)
chr4 (131-192)||(15104227-15104289)
chr4 (131-181)||(20829802-20829852)
chr4 (132-234)||(11490518-11490628)
chr4 (131-198)||(15047113-15047181)
chr4 (131-198)||(15107243-15107311)
chr4 (131-198)||(17951342-17951410)
chr4 (131-198)||(17955194-17955262)
chr4 (142-194)||(19900576-19900628)
chr4 (131-194)||(3774810-3774873)
chr4 (134-222)||(20314988-20315084)
chr4 (133-189)||(12318420-12318477)
chr4 (131-234)||(13128877-13128988)
chr4 (147-234)||(19492703-19492798)
chr4 (131-198)||(5679190-5679258)
chr4 (129-181)||(19092278-19092330)
chr4 (142-198)||(22218647-22218703)
chr4 (131-189)||(10106995-10107054)
chr4 (130-181)||(22357599-22357650)
chr4 (138-234)||(13992879-13992983)
chr4 (148-198)||(19374859-19374909)
chr4 (146-198)||(17709757-17709810)
chr4 (131-194)||(7582282-7582346)
chr4 (131-198)||(11700615-11700683)
chr4 (139-198)||(12578312-12578372)
chr4 (143-198)||(22176008-22176064)
[»] chr2 (21 HSPs)
chr2 (131-234)||(45621884-45621995)
chr2 (131-195)||(12557758-12557823)
chr2 (131-234)||(17743479-17743590)
chr2 (138-234)||(29719234-29719338)
chr2 (142-198)||(8447096-8447152)
chr2 (140-234)||(17349352-17349452)
chr2 (133-198)||(23011809-23011874)
chr2 (130-194)||(32085447-32085512)
chr2 (131-187)||(5792814-5792870)
chr2 (131-198)||(27909165-27909233)
chr2 (131-198)||(45553115-45553183)
chr2 (133-234)||(20174638-20174747)
chr2 (138-198)||(25888266-25888327)
chr2 (138-181)||(15339230-15339273)
chr2 (129-189)||(8503125-8503187)
chr2 (131-188)||(17889922-17889979)
chr2 (138-198)||(26603396-26603457)
chr2 (133-178)||(27418344-27418389)
chr2 (146-198)||(29883224-29883276)
chr2 (131-198)||(30411663-30411731)
chr2 (131-198)||(32440043-32440111)
[»] chr1 (25 HSPs)
chr1 (130-198)||(26540879-26540948)
chr1 (131-198)||(3591699-3591767)
chr1 (129-234)||(12208584-12208697)
chr1 (131-223)||(21847619-21847718)
chr1 (131-187)||(16359856-16359912)
chr1 (131-198)||(27117764-27117832)
chr1 (145-234)||(15543969-15544066)
chr1 (131-224)||(29242504-29242605)
chr1 (131-222)||(32383024-32383112)
chr1 (131-181)||(23038075-23038125)
chr1 (133-198)||(24306351-24306417)
chr1 (131-180)||(17837502-17837551)
chr1 (138-198)||(21449081-21449142)
chr1 (131-198)||(9787925-9787993)
chr1 (138-181)||(17359154-17359197)
chr1 (131-193)||(34480954-34481017)
chr1 (131-181)||(15813218-15813268)
chr1 (131-223)||(17610270-17610370)
chr1 (130-198)||(18736286-18736355)
chr1 (130-194)||(24281261-24281326)
chr1 (131-198)||(16787772-16787840)
chr1 (131-194)||(22664191-22664255)
chr1 (131-194)||(17121530-17121593)
chr1 (129-198)||(12012846-12012916)
chr1 (139-234)||(13345339-13345442)
[»] chr3 (29 HSPs)
chr3 (131-198)||(31286061-31286128)
chr3 (131-222)||(12805905-12806004)
chr3 (133-198)||(18736718-18736783)
chr3 (138-234)||(21301910-21302014)
chr3 (140-198)||(21825915-21825973)
chr3 (131-234)||(20429695-20429806)
chr3 (138-198)||(41508359-41508420)
chr3 (131-194)||(6289888-6289952)
chr3 (131-198)||(10917903-10917971)
chr3 (131-196)||(7147973-7148038)
chr3 (157-198)||(20339810-20339851)
chr3 (130-224)||(28728927-28729030)
chr3 (131-220)||(8143600-8143695)
chr3 (141-196)||(10744897-10744953)
chr3 (131-194)||(11518011-11518075)
chr3 (131-198)||(12411136-12411204)
chr3 (157-198)||(821560-821602)
chr3 (135-181)||(3116482-3116528)
chr3 (131-181)||(5508321-5508371)
chr3 (131-173)||(22245335-22245377)
chr3 (142-198)||(12759383-12759440)
chr3 (138-194)||(16245779-16245836)
chr3 (131-234)||(21325325-21325436)
chr3 (131-198)||(25756659-25756728)
chr3 (157-198)||(27542961-27543002)
chr3 (131-198)||(8319025-8319092)
chr3 (142-186)||(12752203-12752247)
chr3 (139-198)||(18458470-18458530)
chr3 (147-198)||(22349410-22349462)
[»] chr8 (23 HSPs)
chr8 (131-234)||(5850926-5851037)
chr8 (139-222)||(29382376-29382467)
chr8 (131-198)||(14528134-14528202)
chr8 (131-181)||(30235362-30235412)
chr8 (131-237)||(17101893-17102007)
chr8 (131-198)||(17976604-17976672)
chr8 (140-223)||(24269592-24269682)
chr8 (131-198)||(31288342-31288410)
chr8 (131-198)||(24644823-24644890)
chr8 (130-198)||(30806543-30806612)
chr8 (142-198)||(24119815-24119871)
chr8 (130-194)||(30122205-30122269)
chr8 (131-181)||(19786716-19786766)
chr8 (131-180)||(13697847-13697896)
chr8 (138-198)||(24114328-24114389)
chr8 (157-198)||(44011070-44011111)
chr8 (131-198)||(5052967-5053035)
chr8 (131-198)||(34497100-34497168)
chr8 (134-181)||(6884946-6884993)
chr8 (130-198)||(26008006-26008076)
chr8 (131-181)||(28276821-28276871)
chr8 (157-198)||(30783787-30783829)
chr8 (131-198)||(15238784-15238852)
[»] scaffold0957 (1 HSPs)
scaffold0957 (138-198)||(3145-3205)
[»] scaffold0005 (1 HSPs)
scaffold0005 (131-198)||(168344-168412)
[»] scaffold0043 (1 HSPs)
scaffold0043 (130-194)||(89904-89968)
[»] scaffold0008 (2 HSPs)
scaffold0008 (131-198)||(54845-54913)
scaffold0008 (131-198)||(48236-48304)
[»] scaffold0622 (1 HSPs)
scaffold0622 (133-198)||(715-781)
[»] scaffold0024 (1 HSPs)
scaffold0024 (131-198)||(39569-39637)
[»] scaffold0042 (1 HSPs)
scaffold0042 (148-198)||(29909-29959)
[»] scaffold0394 (1 HSPs)
scaffold0394 (142-191)||(13961-14010)
[»] scaffold0136 (1 HSPs)
scaffold0136 (131-180)||(15530-15579)
[»] scaffold0672 (1 HSPs)
scaffold0672 (131-198)||(1719-1787)
[»] scaffold0128 (1 HSPs)
scaffold0128 (131-181)||(37422-37472)
[»] scaffold0063 (1 HSPs)
scaffold0063 (135-181)||(51112-51158)


Alignment Details
Target: chr6 (Bit Score: 86; Significance: 3e-41; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 8039243 - 8039142
Alignment:
Q  133 atggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtatgattgtcgtttcatccaaacaattcgtgctactt 232  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  8039243 atggtcggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgtaagtggagtatcgtatgattgtcgtttcatccaaacaattcgtgttactt 8039144  T
Q  233 at 234  Q
    ||    
T  8039143 at 8039142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 9726007 - 9726106
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||       |||||||||||| |||||||||||    
T  9726007 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatt 9726106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 25927417 - 25927349
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||||| |||||||||||||||||    
T  25927417 tgatggtcggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtat 25927349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 15466355 - 15466422
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||    
T  15466355 tgatggccggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgtacgtagagtatcgtat 15466422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 8039361 - 8039302
Alignment:
Q  17 agatgcatgatccaaatgtcacaggatttgcagatggcgagaaccgaaggggagcgcgga 76  Q
    ||||||||||||| |||||||| ||||||| |||| ||||||||||||||||||||||||    
T  8039361 agatgcatgatcctaatgtcactggatttgtagatagcgagaaccgaaggggagcgcgga 8039302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 21907417 - 21907485
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||| | ||||||||    
T  21907417 tgatggtcggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 21907485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 27737797 - 27737739
Alignment:
Q  137 tcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    ||||||||||||||||| | ||||||||||||||||||||||||| |||||||| ||||    
T  27737797 tcggattaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatc 27737739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 11176934 - 11177003
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||||||||||| |  ||||||||||| |||| ||||||| |||||||| ||||||||    
T  11176934 atgatggtcggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtat 11177003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 17729144 - 17729205
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||| |||||| | ||||||||||||||||||||||||| |||||||| ||||||||    
T  17729144 cggattaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 17729205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 21672542 - 21672481
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||  | ||||||||||||||||||||||||| |||||||| ||||||||    
T  21672542 cggattaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 21672481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 8241262 - 8241330
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||| |||||||||||||||||| | ||||||||||| |||||| |||||| |||||||| ||||||||    
T  8241262 tgatagtcggattaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtat 8241330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 22567825 - 22567871
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataa 177  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||    
T  22567825 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataa 22567871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 23143714 - 23143818
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgcta 229  Q
    |||||||||||||||| | ||||| |||||||| |||||||||| |||||||| |||| |||       |||||||||||| |||||||||||| || ||    
T  23143714 cggattaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaattcatgtta 23143813  T
Q  230 cttat 234  Q
    |||||    
T  23143814 cttat 23143818  T

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Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 7543074 - 7542963
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||||||||| |||   |||| |||||||||||||||||||| |||||| | ||||||||       || ||| |||||||||||||||||    
T  7543074 tgatggtcggattaggcaaatgtatcaaattgtttaccaagtaataaagtgataagtaaagtatcgtatcaatgtggactgtagtttcatccaaacaatt 7542975  T
Q  223 cgtgctacttat 234  Q
    || | |||||||    
T  7542974 cgcgttacttat 7542963  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 12183438 - 12183377
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||| |||||||| | ||||||||||||||||||||||||| |||||| | ||||||||    
T  12183438 cggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtat 12183377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 14079548 - 14079491
Alignment:
Q  141 attaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgta 197  Q
    ||||||||||||| | |||||||||||||||| |||||||| |||||||| |||||||    
T  14079548 attaggcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatcgta 14079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 19244570 - 19244635
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcg 195  Q
    |||||||| |||||||||||| | | | ||||||||||||||||||||||| |||||||| |||||    
T  19244570 tgatggtcagattaggcaagtttactagatcgtttaccaagtaataaagtgataagtagagtatcg 19244635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 21679958 - 21679897
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||  | ||||||||||| ||||||||||||| |||||||| ||||||||    
T  21679958 cggattaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtat 21679897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 21932161 - 21932100
Alignment:
Q  136 gtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgt 196  Q
    ||||| |||||||||||| | |||| |||||||||||||||||||| |||||||| ||||||    
T  21932161 gtcgggttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgt 21932100  T

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Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 34478536 - 34478577
Alignment:
Q  157 aaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  34478536 aaatcgtttaccaaataataaagtgtaagtagagtatcgtat 34478577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 20005993 - 20005925
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||  | ||||||| | ||||||||||||||||||||||||| |||| ||| ||||||||    
T  20005993 tgatggtcggatacgacaagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtat 20005925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 25781796 - 25781875
Alignment:
Q  147 caagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtatg--attgtcgtttcatccaaacaattc 223  Q
    ||||||| | |||||||||||  ||||||||| || ||| ||||||||||||||  ||||||||||| ||||||||||||    
T  25781796 caagtgtaccaaatcgtttactgagtaataaaatgataaatagaatatcgtatggaattgtcgtttcgtccaaacaattc 25781875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 20722290 - 20722232
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtaga 189  Q
    ||||||||||||| |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  20722290 tgatggtcggatttaggcaaatgtaccaaatcgtttaccaagtaataaagt-taagtaga 20722232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 23645855 - 23645782
Alignment:
Q  157 aaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||||||||||||||| |||||||| ||||||||       |||||||||||| |||||||||||    
T  23645855 aaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaaacaatt 23645782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 5624635 - 5624689
Alignment:
Q  141 attaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    ||||||||| ||| | ||||||||||||||||||||||||| |||||||| ||||    
T  5624635 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatc 5624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 17299919 - 17299877
Alignment:
Q  157 aaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  17299919 aaatcgtttaccaagtaataaagtgataagtagagtatcgtat 17299877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 9516786 - 9516881
Alignment:
Q  147 caagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgctacttat 234  Q
    ||||||| | |||||||||||| |||||||||||| |||||||| ||||||||       |||||||||||| ||||||||| ||| | |||||||    
T  9516786 caagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttat 9516881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 9899073 - 9899024
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagt 180  Q
    |||||||||| |||| ||||||| | |||| |||||||||||||||||||    
T  9899073 tgatggtcgggttagacaagtgtaccaaattgtttaccaagtaataaagt 9899024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 17883892 - 17883789
Alignment:
Q  137 tcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgcta 229  Q
    ||||||||| ||| ||| | ||||||||||||||||||||| |||| ||||||  |||| ||       ||||||| |||| ||||||||||||||| ||    
T  17883892 tcggattagccaaatgtaccaaatcgtttaccaagtaataacgtgtgagtagaggatcgcatcgacagggattgtcctttcgtccaaacaattcgtgtta 17883793  T
Q  230 ctta 233  Q
    ||||    
T  17883792 ctta 17883789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 18075495 - 18075434
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||| |||||| | |||| |||||||||||||||||||| |||| ||| ||||||||    
T  18075495 cggattaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtat 18075434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 20145166 - 20145106
Alignment:
Q  139 ggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||| | |||| ||| |||||||||||||||| |||||||| ||| ||||    
T  20145166 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 20145106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 22187673 - 22187733
Alignment:
Q  139 ggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||| | |||| ||| |||||||||||||||| |||||||| ||| ||||    
T  22187673 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 22187733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 28933774 - 28933706
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||| |||||| | | || ||||| ||| |||||||||| |||||||| ||||||||    
T  28933774 tgatggtcggattaggaaagtgtaccatattgtttagcaaataataaagtgataagtagagtatcgtat 28933706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 18208362 - 18208252
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat-------gattgtcgtttcatccaaacaattc 223  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||||       ||||||| |||| ||||||||||||    
T  18208362 tgatggtcggattaggcaagtgtaccaaatcgtttacaaagtaataaagtgtaagtagagtatcgtatccacatggattgtcctttcgtccaaacaattc 18208263  T
Q  224 gtgctacttat 234  Q
     || |||||||    
T  18208262 atgttacttat 18208252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 24267068 - 24267001
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  24267068 tgatggtcgaattaggcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtat 24267001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 24343699 - 24343632
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  24343699 tgatggtcgaattaggcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtat 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 26121438 - 26121370
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||||| ||| ||||    
T  26121438 atgatggtcggattaggcaagtgtaccaaatcgtttagcaagtaataaaatgtaagtagagtatagtat 26121370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 28253265 - 28253333
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||||||||| | |||| ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  28253265 tgatggtcggatttatgcaaatgtaccaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 28253333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 15544035 - 15544103
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||||| ||| |||||| ||||||||    
T  15544035 tgatggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaactgtcagtagagtatcgtat 15544103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 26110576 - 26110517
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtaga 189  Q
    |||||||||||||||||||||||| |  ||||||||| ||||||||||| ||||||||||    
T  26110576 atgatggtcggattaggcaagtgtaccgaatcgtttatcaagtaataaaatgtaagtaga 26110517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 15469925 - 15469971
Alignment:
Q  135 ggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||    
T  15469925 ggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtg 15469971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 17431868 - 17431979
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagt-gtaagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||  | ||||||| | |||||||||||||||||||||||| | ||||||| ||||||||       |||||||||||||||||||||| |    
T  17431868 tgatggtcggatatgacaagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaact 17431967  T
Q  223 cgtgctacttat 234  Q
    |  |||||||||    
T  17431968 cacgctacttat 17431979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 34487640 - 34487733
Alignment:
Q  148 aagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgctacttat 234  Q
    |||||| | |||| ||||||||||||||||||||||||||||||||| |||       |||||||||||| || |||||||||| | |||||||    
T  34487640 aagtgtaccaaattgtttaccaagtaataaagtgtaagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttat 34487733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 18937733 - 18937783
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||||||||||||| | ||||||||||  |||||||||||||    
T  18937733 tgatggtcggattaggcaagtgtaccaaatcgtttattaagtaataaagtg 18937783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 36175124 - 36175186
Alignment:
Q  136 gtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||||  ||||||| | ||||||||||||||||||||||||||  ||||| ||||||||    
T  36175124 gtcggattaaacaagtgtaccaaatcgtttaccaagtaataaagtgtttgtagagtatcgtat 36175186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 22755506 - 22755605
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||| ||| | |||||||| ||||||||       |||||||||||| |||||||||||    
T  22755506 tgatggtcggattagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaatt 22755605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 19283969 - 19283901
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||| |||||  | |||||||||||||| |||||||||| |||||||| ||| ||||    
T  19283969 tgatggtcggattaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtattgtat 19283901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 20534166 - 20534098
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtatg 199  Q
    ||||||||| ||| | ||||| ||  ||||| ||||||||||||||||||||||||| | |||||||||    
T  20534166 tgatggtcgtatttgccaagtctggcaaatcttttaccaagtaataaagtgtaagtaaagtatcgtatg 20534098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 24167698 - 24167634
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagt-gtaagtagaatatc 194  Q
    ||||| |||||||||| ||||||   |||||||||||||||||||||||| ||||||||| ||||    
T  24167698 tgatgatcggattaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatc 24167634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 234
Target Start/End: Complemental strand, 25550609 - 25550507
Alignment:
Q  140 gattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgctact 231  Q
    ||||||||||||||   ||||||||||||||||||||||||| |||||||| |||| |||       ||||||| |||| |||||||||||| || ||||    
T  25550609 gattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaattcttgttact 25550510  T
Q  232 tat 234  Q
    |||    
T  25550509 tat 25550507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 19086293 - 19086234
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtaga 189  Q
    ||||| |||||||||  |||||| | ||||||||||||||||||||||||| ||||||||    
T  19086293 tgatgatcggattagataagtgtaccaaatcgtttaccaagtaataaagtgataagtaga 19086234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 32417458 - 32417411
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtaga 189  Q
    ||||| |||||| | |||||||||| ||||||||||||||||||||||    
T  32417458 ttaggtaagtgtaccaaatcgtttatcaagtaataaagtgtaagtaga 32417411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 19004326 - 19004272
Alignment:
Q  145 ggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||| | ||||||||||||||||||||||||| ||||| || ||||||||    
T  19004326 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtat 19004272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 20744925 - 20744875
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||  ||||||||| | ||||| |||||||||||||||||||    
T  20744925 tgatggtcggatatggcaagtgtaccaaatcatttaccaagtaataaagtg 20744875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 24662264 - 24662214
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    |||||| ||||||||| |||||| | |||||||||| ||||||||||||||    
T  24662264 tgatggacggattaggtaagtgtaccaaatcgtttatcaagtaataaagtg 24662214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 15375997 - 15375932
Alignment:
Q  131 tgatggtcggatta-ggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    |||||||||||||| ||||||||| | |||||||||||||| ||||||| || |||||||| ||||    
T  15375997 tgatggtcggattatggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatc 15375932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 17769510 - 17769461
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaag 179  Q
    ||||||||||||| | |||||||| | |||||||||||||||||||||||    
T  17769510 tgatggtcggatttatgcaagtgtaccaaatcgtttaccaagtaataaag 17769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 34128648 - 34128689
Alignment:
Q  158 aatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  34128648 aatcgttgaccaagtaataaagtgataagtagaatatcgtat 34128689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 9520999 - 9521055
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagta 187  Q
    ||||||||| ||||||||||||| | |||||||||  |||||||||| | |||||||    
T  9520999 tgatggtcgaattaggcaagtgtaccaaatcgtttgtcaagtaataaggggtaagta 9521055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 17171667 - 17171599
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||| ||||||||||| |||||| | ||||| |||| |||||||||||||| ||||||||  |||||||    
T  17171667 tgattgtcggattaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtat 17171599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 20419951 - 20419991
Alignment:
Q  141 attaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    |||||| |||||| | |||||||||||||||||||||||||    
T  20419951 attaggtaagtgtaccaaatcgtttaccaagtaataaagtg 20419991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 24852286 - 24852218
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||| ||||||||||||| | | |||||| ||||||||||||||| || |||||| | ||||||||    
T  24852286 tgatggttggattaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtat 24852218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 2563810 - 2563913
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgctac 230  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||||       |||||||||||| ||||||||||| ||| |||    
T  2563810 cggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttac 2563909  T
Q  231 ttat 234  Q
    ||||    
T  2563910 ttat 2563913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 7318258 - 7318326
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||| |||||||| ||||||||    
T  7318258 tgatggtcggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtat 7318326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 5047501 - 5047434
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgta 197  Q
    ||||||||||||| |||||||||| | ||||| ||||||||||||||||||||||||||| |||||||    
T  5047501 tgatggtcggatttaggcaagtgtaccaaatcatttaccaagtaataaagtgtaagtagattatcgta 5047434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 9574392 - 9574460
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||| |||||||||||||| | ||||||||||||||| ||||||||| |||||||| ||||||||    
T  9574392 tgatggtcagattaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtat 9574460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 10587130 - 10587070
Alignment:
Q  139 ggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||    
T  10587130 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 10587070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 7397181 - 7397248
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||| |||||||| |||||| | ||| |||||||||||||||||||||||| |||| ||||||||    
T  7397181 tgatggttggattaggaaagtgtaccaaaccgtttaccaagtaataaagtgtaactagagtatcgtat 7397248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 5108559 - 5108651
Alignment:
Q  139 ggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat-------gattgtcgtttcatccaaacaattcg 224  Q
    ||||| ||||||||| | ||||  ||||||||||||||||||||||||||| ||||||||       |||||||||||| |||||||||||||    
T  5108559 ggatttggcaagtgtaccaaattatttaccaagtaataaagtgtaagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcg 5108651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 9864438 - 9864376
Alignment:
Q  133 atggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||| ||||    
T  9864438 atggtcggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatc 9864376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 23100066 - 23099966
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||| ||| ||||||||||||| | |||||||||||||| |||||||||| |||||||| ||||||||       |||||||||||| |||||||||||    
T  23100066 tgatgttcgaattaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 23099967  T
Q  223 c 223  Q
    |    
T  23099966 c 23099966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 31492913 - 31492983
Alignment:
Q  129 catgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||| ||||||||||   ||||||||||||| ||||||||||| |||||||| ||||||||    
T  31492913 catgatggtcggatcaggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtat 31492983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 5797495 - 5797564
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagt-gtaagtagaatatcgtat 198  Q
    ||||||||||||||||||||||||   |||||| |||||||||||||||||  |||||||| ||||||||    
T  5797495 atgatggtcggattaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtat 5797564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 14196086 - 14196030
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagta 187  Q
    |||||||| |||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  14196086 tgatggtcagattaggcaagtgtaccaaatcgtttatcaaataataaagtgtaagta 14196030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 15869588 - 15869648
Alignment:
Q  139 ggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||   ||||||||||||||||||||||||| |||||||| ||||||||    
T  15869588 ggattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 15869648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 16306679 - 16306747
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||| |||||||  |||||| |||| |||||||||||||| |||||||| ||||||||    
T  16306679 tgatggtcggattagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtat 16306747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 23093306 - 23093362
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||| ||| ||||    
T  23093306 ttaggcaagtgtaccaaatcgtttactaagtaataaagtgtaagtagagtattgtat 23093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 26134850 - 26134794
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||| ||||||| | |||||||||||||||||||||| |||||||||| ||||||||    
T  26134850 ttagacaagtgtaccaaatcgtttaccaagtaataaaatgtaagtagagtatcgtat 26134794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 9890166 - 9890236
Alignment:
Q  130 atgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagt-gtaagtagaatatcgtat 198  Q
    |||||||||||||| | |||||||| | |||||||||||| ||||||||||| ||||||||| ||||||||    
T  9890166 atgatggtcggatttaagcaagtgtactaaatcgtttaccgagtaataaagtagtaagtagagtatcgtat 9890236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 19153283 - 19153333
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    |||||||| |||||||||||||| | ||||| |||||||||||||||||||    
T  19153283 tgatggtcagattaggcaagtgtaccaaatcttttaccaagtaataaagtg 19153333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 20752682 - 20752732
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    |||||||| |||||||||||||| | ||||| |||||||||||||||||||    
T  20752682 tgatggtcagattaggcaagtgtaccaaatcttttaccaagtaataaagtg 20752732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 2350854 - 2350793
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||| | ||||| |||||||||||||||| || |||||||| ||||||||    
T  2350854 cggattaggcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtat 2350793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 3734581 - 3734649
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||| ||||||| |||||| | ||||  ||||||||||||||||||| |||||||| ||||||||    
T  3734581 tgatggtcagattaggtaagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtat 3734649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 4986546 - 4986590
Alignment:
Q  137 tcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||    
T  4986546 tcggattagacaagtgtaccaaatcgtttaccaagtaataaagtg 4986590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 4990644 - 4990688
Alignment:
Q  137 tcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||    
T  4990644 tcggattagacaagtgtaccaaatcgtttaccaagtaataaagtg 4990688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 6042453 - 6042513
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||| |||||||   ||||||||||||| |||||||| |||||||||| ||||||||    
T  6042453 cggattagacaagtgtatcaaatcgtttaccatgtaataaaatgtaagtagagtatcgtat 6042513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 15303723 - 15303667
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||| ||||||| | ||||||||||||| ||||||||||||||||| | ||||||||    
T  15303723 ttagacaagtgtaccaaatcgtttaccaggtaataaagtgtaagtaaagtatcgtat 15303667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 17203009 - 17203119
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat-------gattgtcgtttcatccaaacaattc 223  Q
    ||||||||||||||||||| |||   |||| |||||  |||||||||||| |||||||| ||||||||       |||||||||||| |||||||||| |    
T  17203009 tgatggtcggattaggcaaatgtattaaattgtttatgaagtaataaagtataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatcc 17203108  T
Q  224 gtgctacttat 234  Q
    | | |||||||    
T  17203109 gcgttacttat 17203119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 4579085 - 4579193
Alignment:
Q  133 atggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcg 224  Q
    ||||||||| ||||||||||| | ||||||||||| ||||||| ||||| |||||||| ||||||||       ||||||| |||  |||||||||||||    
T  4579085 atggtcggactaggcaagtgttccaaatcgtttactaagtaat-aagtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcg 4579183  T
Q  225 tgctacttat 234  Q
    || |||||||    
T  4579184 tgttacttat 4579193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 5530006 - 5530053
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaa 178  Q
    |||||||||||||||||| |||| | |||| |||||||||||||||||    
T  5530006 tgatggtcggattaggcaggtgtaccaaattgtttaccaagtaataaa 5530053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 8054589 - 8054492
Alignment:
Q  145 ggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgctacttat 234  Q
    ||||||||| | |||||||||||||| |||||||||| |||||||| ||||||||        ||||||||||| |||||||||||| || |||||||    
T  8054589 ggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttat 8054492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 9130896 - 9130947
Alignment:
Q  136 gtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagta 187  Q
    ||||||||||||||||||   |||| ||||| ||||||||||||||||||||    
T  9130896 gtcggattaggcaagtgtatcaaattgtttatcaagtaataaagtgtaagta 9130947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 12329667 - 12329710
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaa 174  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||    
T  12329667 tgatggtcggattaggcaaatgtaccaaatcgtttaccaagtaa 12329710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 1584530 - 1584579
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||||||||||||| |  |||| |||||||||||||||||||    
T  1584530 tgatggtcggattaggcaagtgtac-caatcatttaccaagtaataaagtg 1584579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 1587666 - 1587716
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||||||||| ||| | ||||||||||| ||||| |||||||    
T  1587666 tgatggtcggattaggcaaatgtaccaaatcgtttactaagtagtaaagtg 1587716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 8054158 - 8054104
Alignment:
Q  145 ggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||| | ||||||||||||||||||||||||| ||| |||| ||||||||    
T  8054158 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtat 8054104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 9500429 - 9500475
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataa 177  Q
    ||||| ||| ||||||||||||| ||||||| |||||||||||||||    
T  9500429 tgatgatcgaattaggcaagtgtacaaaatcatttaccaagtaataa 9500475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 9731734 - 9731630
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgt-------atgattgtcgtttcatccaaacaattcgtgcta 229  Q
    |||||||||||||||| | ||||||||||  ||||| ||||||| |||||||| ||||||       | |||||||||||| ||||||||||||| | ||    
T  9731734 cggattaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgtta 9731635  T
Q  230 cttat 234  Q
    |||||    
T  9731634 cttat 9731630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 14755244 - 14755194
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||||| ||||||| | |||||||||| |||||| |||||||    
T  14755244 tgatggtcggattagacaagtgtaccaaatcgtttatcaagtagtaaagtg 14755194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 18449226 - 18449326
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaat 221  Q
    ||||||||||||| ||||||||||   |||| ||||||||||||||||||||  ||||| ||||||||||       ||||||||||||| |||||||||    
T  18449226 tgatggtcggatttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttcagccaaacaat 18449325  T
Q  222 t 222  Q
    |    
T  18449326 t 18449326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 18495358 - 18495408
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||||| ||||||| | |||| |||||| |||||||||||||    
T  18495358 tgatggtcggattagtcaagtgtactaaattgtttactaagtaataaagtg 18495408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 18662426 - 18662526
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||| |||||||| ||||||||   ||||||||||||||| | ||||||| |||||||| ||||||||       |||||||||||| |||||||||||    
T  18662426 tgatgatcggattaagcaagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatt 18662525  T
Q  223 c 223  Q
    |    
T  18662526 c 18662526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 1872770 - 1872881
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||| ||||||||||||||||  |||||||| || |||||||| | || |||||||| ||||||||         |||||||||||| |||||||||    
T  1872770 tgatggttggattaggcaagtgtgacaaatcgttcactaagtaatacaatgataagtagagtatcgtatccacataagttgtcgtttcatacaaacaatt 1872869  T
Q  223 cgtgctacttat 234  Q
    |||| |||||||    
T  1872870 cgtgttacttat 1872881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 1882354 - 1882399
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaata 176  Q
    ||||||| ||||||||||||||||  ||||||||||| ||||||||    
T  1882354 tgatggttggattaggcaagtgtgacaaatcgtttactaagtaata 1882399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 2953584 - 2953625
Alignment:
Q  157 aaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||||| ||| |||||||||||||||||| ||||||||    
T  2953584 aaatcgtttatcaaataataaagtgtaagtagagtatcgtat 2953625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 10937598 - 10937655
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||   ||||||||||||||||||||||||| |||||| | ||||||||    
T  10937598 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtat 10937655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 16365690 - 16365739
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagt 180  Q
    |||| ||||||||||  |||||| | ||||||||||||||||||||||||    
T  16365690 tgatagtcggattagaaaagtgtaccaaatcgtttaccaagtaataaagt 16365739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 21230296 - 21230365
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||| ||||||||||||| |   |||||||||||||| ||||||| || |||||||| ||||||||    
T  21230296 atgatggttggattaggcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatcgtat 21230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 8313485 - 8313441
Alignment:
Q  155 caaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||    
T  8313485 caaaatcatttaccaagtaataaagtgataagtagattatcgtat 8313441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 8979120 - 8979056
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    ||||||||||||  || |||||| | ||||| ||||||||||||||||||| |||||||| ||||    
T  8979120 tgatggtcggatatggaaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatc 8979056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 9866639 - 9866591
Alignment:
Q  146 gcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatc 194  Q
    |||||||| | |||| ||||||||| |||||||||||||||||| ||||    
T  9866639 gcaagtgtaccaaattgtttaccaaataataaagtgtaagtagagtatc 9866591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 11221278 - 11221210
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||| |||||| |||||||| | ||||||||||| |||||||||| || |||||||| ||| ||||    
T  11221278 tgatggttggattaagcaagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtat 11221210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 17153268 - 17153200
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||  ||||||   |||| ||||||||||||| |||||| |||||||| ||||||||    
T  17153268 tgatggtcggattagaaaagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtat 17153200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 19882625 - 19882736
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| | |||||| ||||||||       |||||||||||| |||||||||||    
T  19882625 tgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaatt 19882724  T
Q  223 cgtgctacttat 234  Q
    || | |||||||    
T  19882725 cgcgttacttat 19882736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 25121339 - 25121229
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat-------gattgtcgtttcatccaaacaattc 223  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||||||||||||| | ||||||||       |||||| ||||| ||||||||||||    
T  25121339 tgatggtcggattaggaaagtgttccaaatcgtttaccaagtaataaagtgtaagtatagtatcgtatccacaaggattgtggtttcgtccaaacaattc 25121240  T
Q  224 gtgctacttat 234  Q
    | | |||||||    
T  25121239 gcgttacttat 25121229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 9052659 - 9052726
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||| |||||||||| ||||||||    
T  9052659 tgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaaatgtaagtagagtatcgtat 9052726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 13692784 - 13692672
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaat 221  Q
    ||||||||| |||||||||||||| | ||||||||||||||||||||||||| |||||||| |||| |||       ||||||||||||  |||||||||    
T  13692784 atgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaat 13692685  T
Q  222 tcgtgctacttat 234  Q
    ||||| |||||||    
T  13692684 tcgtgttacttat 13692672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 14648880 - 14648948
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||| |||||||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||    
T  14648880 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 14648948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 9737623 - 9737573
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  9737623 tgatggtcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtg 9737573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 13908854 - 13908950
Alignment:
Q  146 gcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgctacttat 234  Q
    |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||       |||||||||||| ||||||||||||||| |||||||    
T  13908854 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttat 13908950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 21323989 - 21323878
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||| ||| | |||||| ||||||||       |||||||||||| |||||||||||    
T  21323989 tgatggtcggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaatt 21323890  T
Q  223 cgtgctacttat 234  Q
    || | |||||||    
T  21323889 cgcgttacttat 21323878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 17671987 - 17672055
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||||| ||| ||||    
T  17671987 tgatggccggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtat 17672055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 15050197 - 15050135
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaata 192  Q
    ||||||||||||| ||||||||||   ||||| ||||||||||||||||||||||||||||||    
T  15050197 tgatggtcggatttaggcaagtgtatcaaatcatttaccaagtaataaagtgtaagtagaata 15050135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 15104227 - 15104289
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaata 192  Q
    ||||||||||||| ||||||||||   ||||| ||||||||||||||||||||||||||||||    
T  15104227 tgatggtcggatttaggcaagtgtatcaaatcatttaccaagtaataaagtgtaagtagaata 15104289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 20829852 - 20829802
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  20829852 tgatggccggattaggcaagtgtaccaaatcgtttaccaagtaataaagtg 20829802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 11490518 - 11490628
Alignment:
Q  132 gatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattc 223  Q
    ||||||||||||||| |||||| | |||| ||||| |||||||||||||| |||||||| ||||||||       |||||| ||||| ||||||||||||    
T  11490518 gatggtcggattaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattc 11490617  T
Q  224 gtgctacttat 234  Q
    | | |||||||    
T  11490618 gcgttacttat 11490628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 15047113 - 15047181
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||| |||||||| |||||| | ||||||||||||||||||||||||| ||||||||  |||||||    
T  15047113 tgatggttggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtat 15047181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 15107311 - 15107243
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||| |||||||| |||||| | ||||||||||||||||||||||||| ||||||||  |||||||    
T  15107311 tgatggttggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtat 15107243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 17951410 - 17951342
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||| ||||||| | ||||||||||||||||| ||||||| |||||| | ||||||||    
T  17951410 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtat 17951342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 17955262 - 17955194
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||| ||||||| | ||||||||||||||||| ||||||| |||||| | ||||||||    
T  17955262 tgatggtcggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtat 17955194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 19900576 - 19900628
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatc 194  Q
    |||||||||||| | |||| |||||||||||||||||||||||||||| ||||    
T  19900576 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgtaagtagagtatc 19900628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 3774810 - 3774873
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatc 194  Q
    |||||||||||||||||||||||   |||| |||||| ||||||||||||| ||||||| ||||    
T  3774810 tgatggtcggattaggcaagtgtatcaaattgtttactaagtaataaagtgcaagtagagtatc 3774873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 20314988 - 20315084
Alignment:
Q  134 tggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||| | |||||||| | |||||||||||||||||||||| || ||||||||||||| |||       |||||||||||| |||||||||||    
T  20314988 tggtcggatcatgcaagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatt 20315084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 12318420 - 12318477
Alignment:
Q  133 atggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtaga 189  Q
    ||||||||||||||||||||| | ||||| || |||||||||||||||| ||||||||    
T  12318420 atggtcggattaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtaga 12318477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 13128988 - 13128877
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||| ||| ||||||||||||| | |||||||||||||||||||||| || |||||||| ||| ||||       |||||||||||| ||||||||| |    
T  13128988 tgatgttcgaattaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaact 13128889  T
Q  223 cgtgctacttat 234  Q
    || | |||||||    
T  13128888 cgcgttacttat 13128877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 234
Target Start/End: Complemental strand, 19492798 - 19492703
Alignment:
Q  147 caagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgctacttat 234  Q
    ||||||| | ||||||||||||||||||||||| | |||||||| ||||||||        ||||||||||||||||||||||||| | |||||||    
T  19492798 caagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttat 19492703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 5679190 - 5679258
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||  ||||| ||||||| | ||||||||||||||||||||||||| | |||||| ||||||||    
T  5679190 tgatggtccaattagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtat 5679258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 19092278 - 19092330
Alignment:
Q  129 catgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    |||||||||| |||||||||||||| | |||| ||||| ||||||||||||||    
T  19092278 catgatggtcagattaggcaagtgtaccaaattgtttatcaagtaataaagtg 19092330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 22218703 - 22218647
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||| || ||| |||||| ||||| |||||||||||||||||||||| ||||||||    
T  22218703 ttaggtaactgtacaaaattgtttatcaagtaataaagtgtaagtagagtatcgtat 22218647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 10106995 - 10107054
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtaga 189  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||||| || |||||||    
T  10106995 tgatggtcggatttaggcaagtgtagcaaatcgtttaccaagtaataaattgcaagtaga 10107054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 22357650 - 22357599
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||| ||||||| |||||| | ||||| |||||||||||||||||||    
T  22357650 atgatggtcagattaggtaagtgtactaaatcatttaccaagtaataaagtg 22357599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 13992983 - 13992879
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagt-gtaagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgcta 229  Q
    ||||| ||| |||||| | |||| ||||||||||||||||||| ||||||||| ||||||||       |||| ||||||  ||||||||||||||| ||    
T  13992983 cggatgaggtaagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaattcgtgtta 13992884  T
Q  230 cttat 234  Q
    |||||    
T  13992883 cttat 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 19374909 - 19374859
Alignment:
Q  148 aagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||| | |||||||||| ||||||||||| |||||||||| ||||||||    
T  19374909 aagtgtaccaaatcgtttatcaagtaataaaatgtaagtagagtatcgtat 19374859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 17709757 - 17709810
Alignment:
Q  146 gcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||| | ||||||||||||||||||||||||| |||||||| ||| ||||    
T  17709757 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtat 17709810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 7582282 - 7582346
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    ||||||||||||  || |||||| | ||||| ||||||||||||||||||| |||||||| ||||    
T  7582282 tgatggtcggatatggaaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatc 7582346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 11700683 - 11700615
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||| ||||||| ||||||| | |||| ||||||||||||||||| || ||| |||| ||||||||    
T  11700683 tgatggttggattagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtat 11700615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 12578372 - 12578312
Alignment:
Q  139 ggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||| | ||||| |||||||| |||||||||| ||| |||| ||||||||    
T  12578372 ggattaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtat 12578312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 22176064 - 22176008
Alignment:
Q  143 taggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||| | |||||||||| |||||||||||||| |||||||| ||| ||||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtat 22176008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 45621995 - 45621884
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||||||  ||||||| ||||||||       |||||||||||| |||||||||||    
T  45621995 tgatggtcggattaagaaagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaatt 45621896  T
Q  223 cgtgctacttat 234  Q
    |||| |||||||    
T  45621895 cgtgttacttat 45621884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 12557823 - 12557758
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcg 195  Q
    ||||||||||||| |||||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  12557823 tgatggtcggatttaggcaagtgtaccaaatcttttaccaagtaataaagtgtaagtagaatatcg 12557758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 17743590 - 17743479
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||  ||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||       |||| ||||||| |||||||||||    
T  17743590 tgatggtcggatatggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaatt 17743491  T
Q  223 cgtgctacttat 234  Q
    |||| |||||||    
T  17743490 cgtgttacttat 17743479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 29719338 - 29719234
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgcta 229  Q
    |||||||||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||       |||||||||||| | ||||||||||| | ||    
T  29719338 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgtta 29719239  T
Q  230 cttat 234  Q
    |||||    
T  29719238 cttat 29719234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 8447152 - 8447096
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||| ||||||||    
T  8447152 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtataagtagattatcgtat 8447096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 17349352 - 17349452
Alignment:
Q  140 gattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgctactt 232  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||       |||||||||||| |||||||| |||| | |||||    
T  17349352 gattaggcaa-tgtactaaatcgtttaccaagtaataaagtgtaagtagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttactt 17349450  T
Q  233 at 234  Q
    ||    
T  17349451 at 17349452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 23011874 - 23011809
Alignment:
Q  133 atggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||||| ||||||||||| | ||||  ||||||||||||||||||||||||||| ||| ||||    
T  23011874 atggtcggaataggcaagtgtaccaaattttttaccaagtaataaagtgtaagtagattattgtat 23011809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 32085447 - 32085512
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    ||||||||||||||||| |||||| | |||| |||||||||||||||||||| |||||||| ||||    
T  32085447 atgatggtcggattaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatc 32085512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 5792814 - 5792870
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagta 187  Q
    |||||||| |||||||||||||||| ||||||||||  ||||||||| |||||||||    
T  5792814 tgatggtcagattaggcaagtgtgccaaatcgtttattaagtaataacgtgtaagta 5792870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 27909233 - 27909165
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||| |||  ||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||    
T  27909233 tgatggtcagatatggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 27909165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 45553115 - 45553183
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||  |||||||||||||| | |||||||||| |||||||||||||| |||||| ||||||||||    
T  45553115 tgatggttagattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtat 45553183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 20174747 - 20174638
Alignment:
Q  133 atggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcg 224  Q
    |||||| ||||||| |||||| | ||||||||||||||||||||||||| |||||||| |||| | |       |||||||||||| ||||||||||||     
T  20174747 atggtcagattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaattca 20174648  T
Q  225 tgctacttat 234  Q
    || |||||||    
T  20174647 tgttacttat 20174638  T

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Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 25888327 - 25888266
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||| | |||| |||||||||||||||||||| |||||| | ||||||||    
T  25888327 cggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtat 25888266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 15339230 - 15339273
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    |||||||||||||||| | ||||| |||||||||||||||||||    
T  15339230 cggattaggcaagtgtaccaaatcatttaccaagtaataaagtg 15339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 8503187 - 8503125
Alignment:
Q  129 catgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtaga 189  Q
    ||||||||||| ||| |||||||||| | ||||||||||||||||||||| ||| ||||||||    
T  8503187 catgatggtcgtatttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagtaga 8503125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 17889922 - 17889979
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtag 188  Q
    ||||||||||||||  ||||||| | ||||||||||| || ||||| |||||||||||    
T  17889922 tgatggtcggattatacaagtgtaccaaatcgtttactaaataatacagtgtaagtag 17889979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 26603457 - 26603396
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||| | |||| ||||| ||||||| |||||| |||||||| ||||||||    
T  26603457 cggattaggcaagtgtaccaaattgtttatcaagtaaaaaagtgataagtagagtatcgtat 26603396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 27418344 - 27418389
Alignment:
Q  133 atggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaa 178  Q
    ||||||||||||||||| ||| | ||||||||||| ||||||||||    
T  27418344 atggtcggattaggcaaatgtaccaaatcgtttacaaagtaataaa 27418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 29883224 - 29883276
Alignment:
Q  146 gcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||| | |||| ||||||||||||||||| |||||||| ||||| ||||    
T  29883224 gcaagtgtactaaattgtttaccaagtaataaaatgtaagtaaaatattgtat 29883276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 30411663 - 30411731
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||  | ||||||| | ||||| ||||||| ||||||||||| |||||||| ||||||||    
T  30411663 tgatggtcggatatgacaagtgtacgaaatcttttaccatgtaataaagtgataagtagagtatcgtat 30411731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 32440111 - 32440043
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||||||||| | |||||||| | |||| |||||||||| |||||||||||| || | ||||||||    
T  32440111 tgatggtcggattcatgcaagtgtaccaaattgtttaccaagaaataaagtgtaaataaagtatcgtat 32440043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 26540879 - 26540948
Alignment:
Q  130 atgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  26540879 atgatggtcggatttaggcaagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatcgtat 26540948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 3591767 - 3591699
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||| |||| ||||||||    
T  3591767 tgatggtcggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtat 3591699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 234
Target Start/End: Original strand, 12208584 - 12208697
Alignment:
Q  129 catgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaa 220  Q
    |||||||||| |||  ||||||||| | ||||||||||||||||||||||||| ||||||||||||| |||       |||||||||||| |||||||||    
T  12208584 catgatggtcagatatggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaa 12208683  T
Q  221 ttcgtgctacttat 234  Q
    |||| | |||||||    
T  12208684 ttcgcgttacttat 12208697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 21847619 - 21847718
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat-------gattgtcgtttcatccaaacaattc 223  Q
    ||||||||  ||||||||||||| | |||||||||||||||||||||||| |||||||| ||| ||||       |||||||||||| ||||||||||||    
T  21847619 tgatggtcatattaggcaagtgtaccaaatcgtttaccaagtaataaagtctaagtagagtattgtatccacatggattgtcgtttcgtccaaacaattc 21847718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 16359856 - 16359912
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagta 187  Q
    |||||||| |||||||||||||| | |||||||||||||||||||||| ||||||||    
T  16359856 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaaatgtaagta 16359912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 27117832 - 27117764
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||||| |||||||| ||| ||||    
T  27117832 tgatggtcggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtat 27117764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 15544066 - 15543969
Alignment:
Q  145 ggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgctacttat 234  Q
    ||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||        ||||||||||| ||||||||||||||| |||||||    
T  15544066 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttat 15543969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 29242504 - 29242605
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgta-------tgattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||  ||||||||| | |||| ||||| |||||||||||||| |||||||| |||||||       |||||||||||||||||||||||||    
T  29242504 tgatggtcggatatggcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaatt 29242603  T
Q  223 cg 224  Q
    ||    
T  29242604 cg 29242605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 32383112 - 32383024
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtatgattgtcgtttcatccaaacaatt 222  Q
    ||||||||  ||||||||||||| | ||||||||||||||||||||||||| ||| |||| ||||    |||||||||||| |||||||||||    
T  32383112 tgatggtcaaattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatc----gattgtcgtttcgtccaaacaatt 32383024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 23038125 - 23038075
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  23038125 tgatggttggattaggcaagtgtaccaaatcgtttaccaagtaataaagtg 23038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 24306417 - 24306351
Alignment:
Q  133 atggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||| ||||||||| | || |||||||||||||||||||||| |||||||| ||||||||    
T  24306417 atggtcggatttggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtat 24306351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 17837502 - 17837551
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagt 180  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  17837502 tgatggtcggattaggcaagtgtaccaaattgtttaccaagtaataaagt 17837551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 21449081 - 21449142
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||| |||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||    
T  21449081 cggatcaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 21449142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 9787993 - 9787925
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||| ||||||||||||||||| | ||||| |||| |||||||||||||| |||||||| ||||||||    
T  9787993 tgatgatcggattaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtat 9787925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 17359154 - 17359197
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    |||||||||||||||| | |||||||||||||||||||||||||    
T  17359154 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtg 17359197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 34480954 - 34481017
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatat 193  Q
    |||| |||| ||||| ||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  34480954 tgatcgtcgaattagacaaatgtacaaaatcgtttaccaagtaataaagtgataagtagaatat 34481017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 15813268 - 15813218
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||||||||||||| | |||||||||| || |||||||||||    
T  15813268 tgatggtcggattaggcaagtgtaccaaatcgtttatcatgtaataaagtg 15813218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 17610370 - 17610270
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaag-tgtaagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||  | ||||||| | ||||||||||||||||||||||| | |||||||| ||||||||       |||||||||||| |||||||||||    
T  17610370 tgatggtcggatatgacaagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatt 17610271  T
Q  223 c 223  Q
    |    
T  17610270 c 17610270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 18736355 - 18736286
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||  ||||||||| | |||||||||| |||||||||||||| |||||||  ||||||||    
T  18736355 atgatggtcggatatggcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtat 18736286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 24281261 - 24281326
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    |||||||||  ||||||||| ||| | ||||||||||||||||||||||||| |||||||| ||||    
T  24281261 atgatggtccaattaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagattatc 24281326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 16787840 - 16787772
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||||||| |    |||||||||| |||||||||||||| |||||||| ||||||||    
T  16787840 tgatggtcggattaggcaagggaatcaaatcgtttatcaagtaataaagtgataagtagagtatcgtat 16787772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 22664191 - 22664255
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    ||||| ||| ||||||||| ||| | ||||||||||||||||||||||||| |||||||| ||||    
T  22664191 tgatgctcgaattaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatc 22664255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 17121593 - 17121530
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatc 194  Q
    |||||||| |||||| |||||||   |||| ||||| |||||||||||||||||||||| ||||    
T  17121593 tgatggtcagattagacaagtgtatcaaattgtttatcaagtaataaagtgtaagtagagtatc 17121530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 12012916 - 12012846
Alignment:
Q  129 catgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||| |||||||||||||||   |||||||||| |||||| ||||||| |||||||| ||| ||||    
T  12012916 catgatggttggattaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtat 12012846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 13345442 - 13345339
Alignment:
Q  139 ggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgctac 230  Q
    ||||| ||||||||| | |||| |||||||||||||||||||| |||||||| |||| |||       |||||||||||  ||||||||||||| | |||    
T  13345442 ggattgggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttac 13345343  T
Q  231 ttat 234  Q
    ||||    
T  13345342 ttat 13345339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 31286128 - 31286061
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||||||||||| ||||||| | ||||| |||||||||||||||||||||| |||||||||||||    
T  31286128 tgatggtcggattagacaagtgtaccaaatcatttaccaagtaataaagtgtaactagaatatcgtat 31286061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 12806004 - 12805905
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||||||| |||||||| |||| |||       ||||||||||||||||||||||||    
T  12806004 tgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatt 12805905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 18736783 - 18736718
Alignment:
Q  133 atggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||| ||||| ||||||| | |||||||||||||||||||||||| |||||||||||||||||    
T  18736783 atggtcgaattagacaagtgtaccaaatcgtttaccaagtaataaagtataagtagaatatcgtat 18736718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 21301910 - 21302014
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaattcgtgcta 229  Q
    |||||||||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||       ||||||| |||| ||||||||||||| | ||    
T  21301910 cggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagtta 21302009  T
Q  230 cttat 234  Q
    |||||    
T  21302010 cttat 21302014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 21825973 - 21825915
Alignment:
Q  140 gattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||| |||||| | |||||||||||| |||||||||||||||||||| ||||||||    
T  21825973 gattaggtaagtgtaccaaatcgtttaccgagtaataaagtgtaagtagagtatcgtat 21825915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 20429695 - 20429806
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    |||||||||||||||||| |||| | |||| ||||||||||||||||| || |||||||| ||||||||       ||||||| ||||||||| ||||||    
T  20429695 tgatggtcggattaggcatgtgtactaaattgtttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaatt 20429794  T
Q  223 cgtgctacttat 234  Q
    || | |||||||    
T  20429795 cgcgttacttat 20429806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 41508359 - 41508420
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||| | |||||||||| |||||||||||||| || ||||||||||||||    
T  41508359 cggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtat 41508420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 6289888 - 6289952
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    ||||||||||||||||||| |||   ||||||||||||||||||||||||| |||||||| ||||    
T  6289888 tgatggtcggattaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatc 6289952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 10917903 - 10917971
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||  |||||||||||||| | |||||||||||||| |||||||||| |||||||| ||||||||    
T  10917903 tgatggttcgattaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtat 10917971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 7147973 - 7148038
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgt 196  Q
    ||||||||||||||||||| ||| | ||||||||||||||||| ||||   |||||||| ||||||    
T  7147973 tgatggtcggattaggcaaatgtaccaaatcgtttaccaagtactaaaaaataagtagagtatcgt 7148038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 20339851 - 20339810
Alignment:
Q  157 aaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  20339851 aaatcgtttaccaagtaataaaatgtaagtagagtatcgtat 20339810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 28728927 - 28729030
Alignment:
Q  130 atgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaa 220  Q
    |||||||||||||| |||||||||||  ||||  |||| |||||||||||||| |||||||| ||||||||       ||||||||||||| ||||||||    
T  28728927 atgatggtcggatttaggcaagtgtgtcaaataatttatcaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaa 28729026  T
Q  221 ttcg 224  Q
    ||||    
T  28729027 ttcg 28729030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 8143600 - 8143695
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgta------tgattgtcgtttcatccaaacaa 220  Q
    ||||| || ||||||| |||||| | ||||||||||| ||| ||||||||||||||||| ||| |||      ||||| |||||||||||||||||    
T  8143600 tgatgatcagattaggtaagtgtaccaaatcgtttactaagcaataaagtgtaagtagagtattgtatccacgtgattctcgtttcatccaaacaa 8143695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 10744897 - 10744953
Alignment:
Q  141 attaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgt 196  Q
    ||||||||||| | | ||||||||||||||||||||||||| |||||||| ||||||    
T  10744897 attaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgt 10744953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 11518075 - 11518011
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    ||||||||| |||| |||||||| | |||||||| | |||||||||||||| |||||||||||||    
T  11518075 tgatggtcgaattaagcaagtgtaccaaatcgttcatcaagtaataaagtgataagtagaatatc 11518011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 12411136 - 12411204
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||| |||||||||| | |||||  |||||||||||||||||| | |||||| ||||||||    
T  12411136 tgatggtcggataaggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtat 12411204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 821602 - 821560
Alignment:
Q  157 aaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  821602 aaatcgtttaccaagtaataaagtgataagtagagtatcgtat 821560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 3116528 - 3116482
Alignment:
Q  135 ggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||| ||||||||||||| | |||| ||||||||||||||||||||    
T  3116528 ggtcgaattaggcaagtgtaccaaattgtttaccaagtaataaagtg 3116482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 5508321 - 5508371
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||| ||||||||||||| | ||||| ||| |||||||||||||||    
T  5508321 tgatggtcgaattaggcaagtgtaccaaatcatttgccaagtaataaagtg 5508371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 22245335 - 22245377
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagta 173  Q
    |||| |||||||||||||||||| | |||||||||||||||||    
T  22245335 tgatagtcggattaggcaagtgtaccaaatcgtttaccaagta 22245377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 12759383 - 12759440
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||| ||||||| | |||| |||||||||||||||||||| |||||||| ||||||||    
T  12759383 ttagacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtat 12759440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 16245836 - 16245779
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatc 194  Q
    |||||||| ||||||| | || |||||||||||||||||||||| |||||||| ||||    
T  16245836 cggattagacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatc 16245779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 21325325 - 21325436
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||| || |||||||||||||| | |||| ||||||||||||||||| || |||||| | ||||||||        ||||||||||| |||||||||||    
T  21325325 tgatgatctgattaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatt 21325424  T
Q  223 cgtgctacttat 234  Q
     ||| |||||||    
T  21325425 tgtgttacttat 21325436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 25756659 - 25756728
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaag-tgtaagtagaatatcgtat 198  Q
    ||||||||||||| |||||||||| ||||||| |||| ||| ||||||||  ||||||||| ||||||||    
T  25756659 tgatggtcggatttaggcaagtgtacaaaatcatttatcaaataataaagaagtaagtagagtatcgtat 25756728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 27543002 - 27542961
Alignment:
Q  157 aaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||||||||||| |||||||| |||||||| ||||||||    
T  27543002 aaatcgtttaccaagaaataaagtataagtagagtatcgtat 27542961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 8319025 - 8319092
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||| |||||||||||| | | || |||||||||||||||| ||||| |||||||||||| ||||    
T  8319025 tgatggtcagattaggcaagtataccaa-tcgtttaccaagtaatgaagtgataagtagaatatagtat 8319092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 12752203 - 12752247
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagt 186  Q
    |||| ||||||| | ||||||||||||||||||| ||||||||||    
T  12752203 ttagccaagtgtaccaaatcgtttaccaagtaatgaagtgtaagt 12752247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 18458530 - 18458470
Alignment:
Q  139 ggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||| ||||||| | |||| ||||| |||||||||||||| |||||||| ||||||||    
T  18458530 ggattagacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtat 18458470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 198
Target Start/End: Original strand, 22349410 - 22349462
Alignment:
Q  147 caagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||| | |||||||||||||| |||||||||| |||||||| ||||||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtat 22349462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 5850926 - 5851037
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||||||||| |||||||| ||||||||       ||||||||||||| |||||||||     
T  5850926 tgatggtcggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaatc 5851025  T
Q  223 cgtgctacttat 234  Q
    |||| |||||||    
T  5851026 cgtgttacttat 5851037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 222
Target Start/End: Complemental strand, 29382467 - 29382376
Alignment:
Q  139 ggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||       ||||||||||||||||||||||||    
T  29382467 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatt 29382376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 14528134 - 14528202
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| || ||||| ||||||||    
T  14528134 tgatagtcggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtat 14528202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 30235362 - 30235412
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  30235362 tgatggttggattaggcaagtgtacaaaatcgtttaccaagtaataaagtg 30235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 17102007 - 17101893
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat-------gattgtcgtttcatccaaacaatt 222  Q
    ||||||||||||  || ||||||   ||||||||||||||||||||||||| |||||||| ||||||||       |||||||||||||||||||||||     
T  17102007 tgatggtcggatatggaaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaaacaata 17101908  T
Q  223 cgtgctacttatatt 237  Q
     ||| ||||||||||    
T  17101907 tgtgttacttatatt 17101893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 17976604 - 17976672
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||| |||||||||||||||||||| ||||| |||| |||||||||||||| |||||||| ||||||||    
T  17976604 tgattgtcggattaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtat 17976672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 24269592 - 24269682
Alignment:
Q  140 gattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat-------gattgtcgtttcatccaaacaattc 223  Q
    |||||||||||||| | ||||  ||||||||||||||||||||||||||| ||||||||       |||||||||||| ||||||||||||    
T  24269592 gattaggcaagtgtaccaaattatttaccaagtaataaagtgtaagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattc 24269682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 31288342 - 31288410
Alignment:
Q  131 tgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||||||||| ||| |||||| | ||||||||||||||||||||||||||||||| | ||||||||    
T  31288342 tgatggtcggatttaggaaagtgtaccaaatcgtttaccaagtaataaagtgtaagtaaagtatcgtat 31288410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 24644823 - 24644890
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||| ||||| |||||||||| ||||  ||||||||||||||||||||||||||| ||| ||||    
T  24644823 tgatggtcagattatgcaagtgtgccaaattatttaccaagtaataaagtgtaagtagagtattgtat 24644890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Complemental strand, 30806612 - 30806543
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||||||||||||   ||||||||||  ||||||||||||| |||||||| ||||||||    
T  30806612 atgatggtcggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtat 30806543  T

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Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 24119871 - 24119815
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||||| ||| ||||    
T  24119871 ttagacaagtgtgccaaatcgtttaccaagttataaagtgtaagtagagtattgtat 24119815  T

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Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 30122269 - 30122205
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatc 194  Q
    ||||| |||||||||||||||||| | |||||  || ||||||||||||||||||||||| ||||    
T  30122269 atgatagtcggattaggcaagtgtaccaaatcactttccaagtaataaagtgtaagtagagtatc 30122205  T

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Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 19786716 - 19786766
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||||| ||||| | | |||||||||||||||||||||||||    
T  19786716 tgatggtcggattagacaagtataccaaatcgtttaccaagtaataaagtg 19786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 13697847 - 13697896
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagt 180  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||||    
T  13697847 tgatggtcgaattaggcaagtgtaccaaatcgtttaccaattaataaagt 13697896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 24114389 - 24114328
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||| | |||| ||||||||||||||||| || |||||||| ||||||||    
T  24114389 cggattaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtat 24114328  T

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Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 44011111 - 44011070
Alignment:
Q  157 aaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  44011111 aaatcgtttacgaagtaataaagtgtaagtagagtatcgtat 44011070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 5053035 - 5052967
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||| |||||||||||||| | ||||||||||||  ||||||||||| |||||||| ||| ||||    
T  5053035 tgatggtcagattaggcaagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtat 5052967  T

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Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 34497100 - 34497168
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||| |||||||||||| |   ||||||||||||||||||||||||| | |||||| ||||||||    
T  34497100 tgatggtcagattaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagtatcgtat 34497168  T

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Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 6884946 - 6884993
Alignment:
Q  134 tggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    |||||||||||||||||||| | ||||||| |||| ||||||||||||    
T  6884946 tggtcggattaggcaagtgtactaaatcgtgtacccagtaataaagtg 6884993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 26008006 - 26008076
Alignment:
Q  130 atgatggtcggatt-aggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||| ||| |||||||||| | ||||| ||||||||||||||||||| |||||||| ||| ||||    
T  26008006 atgatggtcgaatttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtat 26008076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 28276871 - 28276821
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    |||||||||||||||||||||||   |||||||||||||| ||| ||||||    
T  28276871 tgatggtcggattaggcaagtgtatcaaatcgtttaccaaataaaaaagtg 28276821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 30783829 - 30783787
Alignment:
Q  157 aaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  30783829 aaatcgtttaccaagtaataaagtgataagtagagtatcgtat 30783787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 15238784 - 15238852
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||| |||||||||||||   |||| ||||||||||||| ||| || |||||||| ||||||||    
T  15238784 tgatggtcgaattaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtat 15238852  T

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Target: scaffold0957 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 3145 - 3205
Alignment:
Q  138 cggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||    
T  3145 cggattaggcaagtgtacaaaattgtttaccaagtaataaagtgtatgtagagtatcgtat 3205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 168412 - 168344
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||| |||||||||||||| | ||||||||||||||||||||||||| |||||||| ||||||||    
T  168412 tgatggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 168344  T

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Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 89968 - 89904
Alignment:
Q  130 atgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatc 194  Q
    |||||||||| ||||| |||||||   ||||||||||||||||||||||||||||||||| ||||    
T  89968 atgatggtcgaattagacaagtgtatcaaatcgtttaccaagtaataaagtgtaagtagagtatc 89904  T

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Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 54845 - 54913
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||||||| |||||||| ||| ||||    
T  54845 tgatggtcggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtat 54913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Complemental strand, 48304 - 48236
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    ||||||||||||  ||||| |||   ||||||||||||||||||||||||| |||||||| ||||||||    
T  48304 tgatggtcggatatggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 48236  T

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Target: scaffold0622 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 715 - 781
Alignment:
Q  133 atggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||| |||||||||||||| | ||||||||||||||||||||||||| |||||||| ||| ||||    
T  715 atggtcagattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtat 781  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 39569 - 39637
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||| |||||||||||||||| ||||||  ||||||||||||||||||| ||||||||  |||||||    
T  39569 tgatggccggattaggcaagtgtacaaaattatttaccaagtaataaagtgataagtagagcatcgtat 39637  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 29909 - 29959
Alignment:
Q  148 aagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaatatcgtat 198  Q
    |||||| | ||||||||||||||||||||||||||||||||| ||| ||||    
T  29909 aagtgtaccaaatcgtttaccaagtaataaagtgtaagtagagtatggtat 29959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 14010 - 13961
Alignment:
Q  142 ttaggcaagtgtgcaaaatcgtttaccaagtaataaagtgtaagtagaat 191  Q
    ||||||||||||   ||||||||||||||||||| |||||||||||||||    
T  14010 ttaggcaagtgtatcaaatcgtttaccaagtaattaagtgtaagtagaat 13961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 15579 - 15530
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagt 180  Q
    |||||||||||||||||||||||   ||||| ||||||||||||||||||    
T  15579 tgatggtcggattaggcaagtgtatcaaatcatttaccaagtaataaagt 15530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 1719 - 1787
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg-taagtagaatatcgtat 198  Q
    |||||||||||||||| |||||| | |||  ||||||||||||| |||||| |||||||| ||||||||    
T  1719 tgatggtcggattaggtaagtgtaccaaactgtttaccaagtaaaaaagtgataagtagagtatcgtat 1787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 37472 - 37422
Alignment:
Q  131 tgatggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||||| ||| ||| | |||| ||||||||||||||||||||    
T  37472 tgatggtcggattagacaaatgtactaaattgtttaccaagtaataaagtg 37422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 51112 - 51158
Alignment:
Q  135 ggtcggattaggcaagtgtgcaaaatcgtttaccaagtaataaagtg 181  Q
    ||||||||||||||||||  | |||| ||||||||||||||||||||    
T  51112 ggtcggattaggcaagtgaaccaaattgtttaccaagtaataaagtg 51158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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