View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19670_low_9 (Length: 306)
Name: NF19670_low_9
Description: NF19670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19670_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 10 - 289
Target Start/End: Original strand, 10388832 - 10389111
Alignment:
| Q |
10 |
gcacagacaccagacatgatactaataataattttcaataaaacatgtgttgttgtcatgtttgtgttggatactgacacatatcaaacaccgaacacgt |
109 |
Q |
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| T |
10388832 |
gcacacacaccagacatgatactaataataattttcaataaaacatgtgttgttgtcatgtttgtgtcggatactgacacatatcagacaccaaatacgt |
10388931 |
T |
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| Q |
110 |
ctccaaactaaagtgacggtgctacgttatttccaatactagtacatttatttaacatatgtaatacttccttgtaggtcttttgatcccaagagttagc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
10388932 |
ctccaaactaaagtgacggtgctacgttatttccaatactagtacatttatttaacatatttaatacttccttgtaggtcttttgatcccaagagttagc |
10389031 |
T |
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| Q |
210 |
tcaaaaacgcttcgtcaagcagtggaaattgtaggatgtgttataactccacataatgtatttcttcattcagcattagt |
289 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
10389032 |
tcaaaaacgcttcgtcaagcagtggaaattgtaggatgtgttataactccacataatgtgtttcttcattcagcattagt |
10389111 |
T |
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