View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19672_high_2 (Length: 221)
Name: NF19672_high_2
Description: NF19672
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19672_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 13 - 203
Target Start/End: Original strand, 34318265 - 34318455
Alignment:
| Q |
13 |
cacagaccaatccaatcaccaaaccgccaaattcacctgtttgattgccaagaaaatgaaaatcaaagggtgcccagaattttaacagcgttaaagattg |
112 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34318265 |
cacaaaccaatccaatcaccaaaccgccaaattcacctgtttgattgccaagaaaatgaaaatcaaagggtgcccagaattttaacagcgttaaagattg |
34318364 |
T |
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| Q |
113 |
aaactttgaataaaaaattgatctttatgacagtttggaattttggtatttgctgctaatgattcttcatgctttgacctaaacgataatt |
203 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |
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| T |
34318365 |
aaactttgaataaaaaattgacctttatgacagtttggaattttggtatttgctgttaatgattcttcatgctttgaccaaaacgataatt |
34318455 |
T |
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