View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19674_low_4 (Length: 795)

Name: NF19674_low_4
Description: NF19674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19674_low_4
NF19674_low_4
[»] chr5 (19 HSPs)
chr5 (515-788)||(14507960-14508234)
chr5 (519-569)||(372732-372782)
chr5 (519-589)||(13734352-13734422)
chr5 (519-569)||(14206398-14206448)
chr5 (520-569)||(6865799-6865848)
chr5 (381-414)||(13713632-13713665)
chr5 (519-556)||(14914370-14914407)
chr5 (519-556)||(33823729-33823766)
chr5 (521-556)||(16143390-16143425)
chr5 (517-556)||(23991170-23991209)
chr5 (519-554)||(38500941-38500976)
chr5 (521-556)||(42699057-42699092)
chr5 (519-569)||(5007743-5007793)
chr5 (518-556)||(26660447-26660485)
chr5 (518-556)||(26932039-26932077)
chr5 (519-569)||(33567235-33567285)
chr5 (519-556)||(6515474-6515511)
chr5 (521-554)||(28501592-28501625)
chr5 (519-556)||(28811427-28811464)
[»] chr3 (31 HSPs)
chr3 (453-511)||(1459216-1459274)
chr3 (520-588)||(47683800-47683868)
chr3 (517-569)||(43169765-43169817)
chr3 (517-556)||(48405406-48405445)
chr3 (516-554)||(52564672-52564710)
chr3 (519-556)||(8254025-8254062)
chr3 (519-556)||(49196694-49196731)
chr3 (518-570)||(1765401-1765453)
chr3 (520-568)||(11056935-11056983)
chr3 (521-556)||(462437-462472)
chr3 (517-556)||(3069610-3069649)
chr3 (521-556)||(11327108-11327143)
chr3 (518-569)||(23906999-23907050)
chr3 (519-554)||(35376589-35376624)
chr3 (518-569)||(44937216-44937267)
chr3 (519-554)||(53932429-53932464)
chr3 (519-569)||(46952947-46952997)
chr3 (522-556)||(47101523-47101557)
chr3 (519-569)||(49761317-49761367)
chr3 (519-556)||(1901962-1901999)
chr3 (519-556)||(1911408-1911445)
chr3 (518-567)||(3483129-3483178)
chr3 (519-556)||(7867747-7867784)
chr3 (519-556)||(18169155-18169192)
chr3 (519-556)||(20714241-20714278)
chr3 (516-569)||(29846903-29846956)
chr3 (524-569)||(31997816-31997861)
chr3 (519-556)||(36818954-36818991)
chr3 (519-556)||(48945845-48945882)
chr3 (520-569)||(50876374-50876423)
chr3 (519-556)||(55344332-55344369)
[»] chr4 (34 HSPs)
chr4 (522-589)||(28676144-28676211)
chr4 (520-569)||(2109442-2109491)
chr4 (521-568)||(32365680-32365727)
chr4 (519-569)||(54036541-54036591)
chr4 (517-566)||(33093130-33093179)
chr4 (520-556)||(34259814-34259850)
chr4 (521-569)||(39241313-39241361)
chr4 (518-562)||(46173547-46173591)
chr4 (520-556)||(51359826-51359862)
chr4 (521-556)||(169538-169573)
chr4 (518-569)||(28657452-28657503)
chr4 (521-556)||(30042134-30042169)
chr4 (521-556)||(39010173-39010208)
chr4 (513-556)||(40983088-40983131)
chr4 (518-565)||(41262645-41262692)
chr4 (517-556)||(51717318-51717357)
chr4 (519-569)||(4511823-4511873)
chr4 (518-556)||(4896536-4896574)
chr4 (518-556)||(9162063-9162101)
chr4 (520-554)||(10994190-10994224)
chr4 (514-556)||(11012134-11012176)
chr4 (520-554)||(13267516-13267550)
chr4 (520-562)||(32621637-32621679)
chr4 (521-563)||(37547065-37547107)
chr4 (520-562)||(41119500-41119542)
chr4 (520-554)||(43168752-43168786)
chr4 (519-569)||(43769721-43769771)
chr4 (519-569)||(46686243-46686292)
chr4 (519-556)||(5208363-5208400)
chr4 (524-569)||(29974339-29974384)
chr4 (520-569)||(30973596-30973645)
chr4 (520-569)||(31657657-31657706)
chr4 (518-555)||(40786354-40786391)
chr4 (520-569)||(42490919-42490968)
[»] chr1 (36 HSPs)
chr1 (519-589)||(40596046-40596116)
chr1 (519-589)||(43612072-43612142)
chr1 (516-569)||(27687531-27687584)
chr1 (521-569)||(34187275-34187323)
chr1 (521-569)||(41507206-41507254)
chr1 (519-569)||(49453489-49453539)
chr1 (519-569)||(50797789-50797839)
chr1 (519-556)||(9011643-9011680)
chr1 (519-556)||(40612112-40612149)
chr1 (519-556)||(42256458-42256495)
chr1 (520-569)||(43757598-43757647)
chr1 (516-556)||(11947790-11947830)
chr1 (521-569)||(40139126-40139174)
chr1 (518-562)||(42539415-42539459)
chr1 (517-556)||(10435834-10435873)
chr1 (517-556)||(29489395-29489434)
chr1 (518-569)||(33358170-33358221)
chr1 (519-554)||(48325805-48325840)
chr1 (519-569)||(1690444-1690494)
chr1 (519-569)||(8200085-8200135)
chr1 (518-556)||(11097920-11097958)
chr1 (518-556)||(21433437-21433475)
chr1 (520-554)||(39669805-39669839)
chr1 (519-569)||(45272172-45272222)
chr1 (519-569)||(46903479-46903529)
chr1 (518-556)||(50226915-50226953)
chr1 (524-569)||(5477175-5477220)
chr1 (519-556)||(18610771-18610808)
chr1 (515-556)||(26585209-26585250)
chr1 (519-556)||(27352628-27352665)
chr1 (521-562)||(34974779-34974820)
chr1 (524-569)||(41558007-41558052)
chr1 (520-569)||(48220155-48220204)
chr1 (521-562)||(48872047-48872088)
chr1 (523-556)||(50035573-50035606)
chr1 (519-556)||(52669804-52669841)
[»] chr7 (22 HSPs)
chr7 (519-585)||(2469701-2469767)
chr7 (519-569)||(34992347-34992397)
chr7 (521-556)||(20406541-20406576)
chr7 (518-569)||(22330643-22330694)
chr7 (518-556)||(4971287-4971325)
chr7 (519-569)||(26041319-26041369)
chr7 (518-568)||(28862094-28862144)
chr7 (519-569)||(37352002-37352052)
chr7 (518-556)||(37856190-37856228)
chr7 (520-556)||(19426579-19426615)
chr7 (521-556)||(2347095-2347130)
chr7 (522-569)||(24044759-24044806)
chr7 (521-556)||(33050183-33050218)
chr7 (518-569)||(41985112-41985163)
chr7 (519-569)||(2323302-2323352)
chr7 (518-556)||(44511136-44511174)
chr7 (524-569)||(23680050-23680095)
chr7 (520-569)||(25887593-25887642)
chr7 (519-556)||(30864453-30864490)
chr7 (519-556)||(31274565-31274602)
chr7 (519-556)||(33223565-33223602)
chr7 (519-556)||(37392041-37392078)
[»] chr6 (18 HSPs)
chr6 (521-590)||(12177577-12177646)
chr6 (519-556)||(3339535-3339572)
chr6 (519-551)||(237439-237471)
chr6 (521-569)||(2862057-2862105)
chr6 (521-569)||(2881308-2881356)
chr6 (517-569)||(28748120-28748172)
chr6 (519-554)||(11785353-11785388)
chr6 (517-556)||(15666809-15666848)
chr6 (519-569)||(1897695-1897745)
chr6 (518-556)||(3088970-3089008)
chr6 (519-569)||(12441536-12441586)
chr6 (518-556)||(28965876-28965914)
chr6 (519-569)||(32149498-32149548)
chr6 (519-556)||(15722539-15722576)
chr6 (519-556)||(25127869-25127906)
chr6 (519-556)||(27334856-27334893)
chr6 (519-556)||(27395596-27395633)
chr6 (519-556)||(32729887-32729924)
[»] chr2 (20 HSPs)
chr2 (520-569)||(9834093-9834142)
chr2 (518-562)||(29795444-29795488)
chr2 (514-556)||(5031916-5031958)
chr2 (519-564)||(42283267-42283312)
chr2 (517-569)||(3012857-3012909)
chr2 (516-556)||(3299141-3299181)
chr2 (519-587)||(4263858-4263925)
chr2 (519-555)||(31296882-31296918)
chr2 (518-554)||(35171264-35171300)
chr2 (520-556)||(36909879-36909915)
chr2 (513-544)||(1052544-1052575)
chr2 (521-555)||(4344449-4344483)
chr2 (519-569)||(6646833-6646883)
chr2 (518-556)||(29168722-29168760)
chr2 (518-556)||(33296107-33296145)
chr2 (519-556)||(4738608-4738645)
chr2 (519-568)||(8482245-8482294)
chr2 (520-569)||(22353187-22353236)
chr2 (519-556)||(28508477-28508514)
chr2 (520-569)||(37966366-37966415)
[»] scaffold0054 (1 HSPs)
scaffold0054 (517-569)||(31612-31664)
[»] chr8 (26 HSPs)
chr8 (518-569)||(37392140-37392191)
chr8 (519-587)||(157065-157133)
chr8 (520-568)||(5502370-5502418)
chr8 (513-569)||(14710905-14710961)
chr8 (517-569)||(30439517-30439569)
chr8 (516-556)||(38844826-38844866)
chr8 (516-556)||(39021479-39021519)
chr8 (519-555)||(44380651-44380687)
chr8 (521-556)||(21273746-21273781)
chr8 (517-556)||(22852875-22852914)
chr8 (517-556)||(36497657-36497696)
chr8 (518-556)||(11223895-11223933)
chr8 (518-556)||(38128812-38128850)
chr8 (519-569)||(40413361-40413411)
chr8 (519-569)||(41934990-41935040)
chr8 (519-556)||(5771912-5771949)
chr8 (524-569)||(11138910-11138955)
chr8 (519-556)||(12045689-12045726)
chr8 (519-556)||(20288531-20288568)
chr8 (519-556)||(21075160-21075197)
chr8 (519-556)||(26294187-26294224)
chr8 (519-556)||(26307444-26307481)
chr8 (519-556)||(28927679-28927716)
chr8 (521-554)||(43873729-43873762)
chr8 (522-567)||(44607702-44607747)
chr8 (519-556)||(45101394-45101431)
[»] scaffold0100 (1 HSPs)
scaffold0100 (519-569)||(44784-44834)
[»] scaffold0592 (1 HSPs)
scaffold0592 (519-556)||(8343-8380)
[»] scaffold0011 (1 HSPs)
scaffold0011 (519-556)||(219700-219737)


Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-129; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 515 - 788
Target Start/End: Complemental strand, 14508234 - 14507960
Alignment:
Q  515 tattaagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactcttagtagtacctattagataccaaga 614  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||    
T  14508234 tattgagagaaatgatatttgtacaactattttgtgacaactatctctttcatacgcatattatattcttactcttagtagtacctattagataccaaga 14508135  T
Q  615 attgtaatactaagtcaccccattggaaattaaatgcaaatgtttcttgcctatcattataccacttc-aaattaaaggctaggaagaggattatagtaa 713  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  14508134 attgtaatactaagtcaccccattggaaattaaatgcaaatgtttcttgccaatcattataccacttcaaaattaaaggctaggaagaggattatagtaa 14508035  T
Q  714 tatccttgacggcgaagtaaaggataaagaaaatctttcaatgaaatctatgccacacctgttctaaaatattgc 788  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14508034 tatccttgacggcgaagtaaaggataaagaaaatctttcaatgaaatctatgccacacctgttctaaaatattgc 14507960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 569
Target Start/End: Complemental strand, 372782 - 372732
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||| ||||||    
T  372782 aagagaaatgatttttgtacaaccattttgtgacaactttctctctcatac 372732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 589
Target Start/End: Complemental strand, 13734422 - 13734352
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactct 589  Q
    |||||||||||||||||||||||||  || |||||||| ||||| ||||||   |||| ||||||||||||    
T  13734422 aagagaaatgatatttgtacaaccactttatgacaactttctctctcatactcacattatattcttactct 13734352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 14206398 - 14206448
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||| || |||||||| ||||| ||||||    
T  14206398 aagagaaatgatatttgtacaaccattttttgacaactttctctctcatac 14206448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 569
Target Start/End: Complemental strand, 6865848 - 6865799
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  6865848 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatac 6865799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 414
Target Start/End: Original strand, 13713632 - 13713665
Alignment:
Q  381 ggctggtcaacacattgaccatcatgttttccac 414  Q
    ||||||||||||||||||||||||||||||||||    
T  13713632 ggctggtcaacacattgaccatcatgttttccac 13713665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 14914370 - 14914407
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| |||||||||||    
T  14914370 aagagaaatgatatttgtacaaccattttgtgacaact 14914407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 33823766 - 33823729
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  33823766 aagagaaatgatatttgtacaaccaacttgtgacaact 33823729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 556
Target Start/End: Original strand, 16143390 - 16143425
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||| |||||||||||    
T  16143390 gagaaatgatatttgtacaaccattttgtgacaact 16143425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 556
Target Start/End: Complemental strand, 23991209 - 23991170
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  23991209 ttaagagaaatgatatttgtacaaccactttgtgacaact 23991170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 554
Target Start/End: Original strand, 38500941 - 38500976
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    |||||||||||||||||||||||||| |||||||||    
T  38500941 aagagaaatgatatttgtacaaccattttgtgacaa 38500976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 556
Target Start/End: Original strand, 42699057 - 42699092
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||| |||||||||||    
T  42699057 gagaaatgatatttgtacaaccattttgtgacaact 42699092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Complemental strand, 5007793 - 5007743
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||| ||||| || ||||||||| | ||||||||||||    
T  5007793 aagagaaatgatatttgaacaacaattttgtgacaattttctctttcatac 5007743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 26660485 - 26660447
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  26660485 taagagaaatgatatttgtacatccattttgtgacaact 26660447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 26932077 - 26932039
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  26932077 taagagaaatgatatttgtacatccattttgtgacaact 26932039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Complemental strand, 33567285 - 33567235
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||| ||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  33567285 aagacaaatgatatttgtacaaccactttgtgacaactttctctctcatac 33567235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 6515511 - 6515474
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  6515511 aagaaaaatgatatttgtacaaccaccttgtgacaact 6515474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 554
Target Start/End: Original strand, 28501592 - 28501625
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    |||||||||||||||||||||||| |||||||||    
T  28501592 gagaaatgatatttgtacaaccattttgtgacaa 28501625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 28811427 - 28811464
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  28811427 aagagaaatgatatttgtacaaccactttgtgacaact 28811464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 8e-20; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 453 - 511
Target Start/End: Complemental strand, 1459274 - 1459216
Alignment:
Q  453 ctaaagcagcatcgggatcaattcgggatgttttttcttgcaatatattgcgttgctgt 511  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  1459274 ctaaagcagcatcgggatcaattcgggatgttttttctcgcaatatattgcattgctgt 1459216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 47683800 - 47683868
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactc 588  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||||||   |||||| |||||||||    
T  47683800 agagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattgtgttcttactc 47683868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 517 - 569
Target Start/End: Complemental strand, 43169817 - 43169765
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||||| ||||||||||| | ||| ||||||    
T  43169817 ttaagagaaatgatatttgtacaaccattttgtgacaactttttctctcatac 43169765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 517 - 556
Target Start/End: Original strand, 48405406 - 48405445
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  48405406 ttaagagaaatgatatttgtacaaccattttgtgacaact 48405445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 554
Target Start/End: Complemental strand, 52564710 - 52564672
Alignment:
Q  516 attaagagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  52564710 attaagagaaatgatatttgtacaaccattttgtgacaa 52564672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 8254025 - 8254062
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8254025 aagagaaatgatatttgtacaaccattttgtgacaact 8254062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 49196694 - 49196731
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| |||||||||||    
T  49196694 aagagaaatgatatttgtacaaccattttgtgacaact 49196731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 570
Target Start/End: Original strand, 1765401 - 1765453
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacg 570  Q
    ||||||||||||||||||||||  ||| ||||||||||| ||||| |||||||    
T  1765401 taagagaaatgatatttgtacattcattttgtgacaactttctctctcatacg 1765453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 568
Target Start/End: Complemental strand, 11056983 - 11056935
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcata 568  Q
    |||||||||||||||||||||| || || |||||||| |||||||||||    
T  11056983 agagaaatgatatttgtacaacaattttttgacaactttctctttcata 11056935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 556
Target Start/End: Complemental strand, 462472 - 462437
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||| |||||||||||    
T  462472 gagaaatgatatttgtacaaccattttgtgacaact 462437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 556
Target Start/End: Complemental strand, 3069649 - 3069610
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  3069649 ttaagagaaatgatatttgtacaaccaatttgtgacaact 3069610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 556
Target Start/End: Original strand, 11327108 - 11327143
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||| |||||||||||    
T  11327108 gagaaatgatatttgtacaaccattttgtgacaact 11327143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 569
Target Start/End: Complemental strand, 23907050 - 23906999
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||||  ||| |||||| ||||| ||||||    
T  23907050 taagagaaatgatatttgtacaaccattatgttacaactttctctctcatac 23906999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 554
Target Start/End: Complemental strand, 35376624 - 35376589
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    |||||||||||||||||||||||||| |||||||||    
T  35376624 aagagaaatgatatttgtacaaccattttgtgacaa 35376589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 569
Target Start/End: Original strand, 44937216 - 44937267
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||| || || |||||||| ||||||| ||||    
T  44937216 taagagaaatgatatttgtacaacaattttttgacaactttctcttttatac 44937267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 554
Target Start/End: Complemental strand, 53932464 - 53932429
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    |||||||||||||||||||||||||| |||||||||    
T  53932464 aagagaaatgatatttgtacaaccattttgtgacaa 53932429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 46952947 - 46952997
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||| || ||| |||| ||||| ||||||    
T  46952947 aagagaaatgatatttgtacaaccattttttgataactttctctctcatac 46952997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 556
Target Start/End: Original strand, 47101523 - 47101557
Alignment:
Q  522 agaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||| |||||||||||    
T  47101523 agaaatgatatttgtacaaccattttgtgacaact 47101557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 49761317 - 49761367
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  49761317 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatac 49761367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 1901999 - 1901962
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  1901999 aagagaaatgatatttgtacaaccactttgtgacaact 1901962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 1911445 - 1911408
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  1911445 aagagaaatgatatttgtacaaccactttgtgacaact 1911408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 567
Target Start/End: Original strand, 3483129 - 3483178
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctctttcat 567  Q
    ||||||||||||||||||||||||||  ||||||| ||| ||||| ||||    
T  3483129 taagagaaatgatatttgtacaaccactttgtgacgactttctctctcat 3483178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 7867784 - 7867747
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||| || |||||||||||    
T  7867784 aagagaaatgatatttgtacaactattttgtgacaact 7867747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 18169155 - 18169192
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  18169155 aagagaaatgatatttgtacaaccactttgtgacaact 18169192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 20714241 - 20714278
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  20714241 aagagaaatgatatttgtacaaccaatttgtgacaact 20714278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 569
Target Start/End: Complemental strand, 29846956 - 29846903
Alignment:
Q  516 attaagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||||||||| ||   |||||| ||||| ||||||    
T  29846956 attaagagaaatgatatttgtacaaccatttttgtacaactttctctctcatac 29846903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 569
Target Start/End: Original strand, 31997816 - 31997861
Alignment:
Q  524 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||||||    
T  31997816 aaatgatatttgtacaaccactttgtgacaactttctttttcatac 31997861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 36818954 - 36818991
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  36818954 aagagaaatgatatttgtacaaccaatttgtgacaact 36818991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 48945845 - 48945882
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  48945845 aagagaaatgatatttgtacaaccactttgtgacaact 48945882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 569
Target Start/End: Complemental strand, 50876423 - 50876374
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||| || || |||||||| ||||| ||||||    
T  50876423 agagaaatgatatttgtacaacaattttttgacaactttctctatcatac 50876374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 55344369 - 55344332
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  55344369 aagagaaatgatatttgtacaaccattttgtgataact 55344332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 522 - 589
Target Start/End: Complemental strand, 28676211 - 28676144
Alignment:
Q  522 agaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactct 589  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||   |||| ||||||||||||    
T  28676211 agaaatgatatttgtacaaccattttgtgacaactttctctttcatactcacattatattcttactct 28676144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 2109442 - 2109491
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  2109442 agagaaatgatatttgtacaaccatcttttgacaactttctctttcatac 2109491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 521 - 568
Target Start/End: Complemental strand, 32365727 - 32365680
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcata 568  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  32365727 gagaaatgatatttgtacaaccattttgtgacaactttctctctcata 32365680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 569
Target Start/End: Complemental strand, 54036591 - 54036541
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||| ||||||||||| | ||| ||||||    
T  54036591 aagagaaatgatatttgtacaaccattttgtgacaactttatctctcatac 54036541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 566
Target Start/End: Complemental strand, 33093179 - 33093130
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaactatctctttca 566  Q
    ||||||||||||||||||||||||| || ||||||||||| ||| |||||    
T  33093179 ttaagagaaatgatatttgtacaactattttgtgacaactttctttttca 33093130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 556
Target Start/End: Original strand, 34259814 - 34259850
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||| |||||||||||    
T  34259814 agagaaatgatatttgtacaaccattttgtgacaact 34259850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 569
Target Start/End: Complemental strand, 39241361 - 39241313
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  39241361 gagaaatgatatttgtacaaccaatttgtgacaactttctctctcatac 39241313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 46173547 - 46173591
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctct 562  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||    
T  46173547 taagagaaatgatatttgtacaaccactttgtgacaactttctct 46173591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 556
Target Start/End: Complemental strand, 51359862 - 51359826
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||| |||||||||||    
T  51359862 agagaaatgatatttgtacaaccattttgtgacaact 51359826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 556
Target Start/End: Complemental strand, 169573 - 169538
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||| |||||||||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaact 169538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 569
Target Start/End: Complemental strand, 28657503 - 28657452
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  28657503 taagagaaatgatatttgaacatccattttgtgacaactttctctctcatac 28657452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 556
Target Start/End: Original strand, 30042134 - 30042169
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||| |||||||||||    
T  30042134 gagaaatgatatttgtacaaccattttgtgacaact 30042169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 556
Target Start/End: Complemental strand, 39010208 - 39010173
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||| |||||||||||    
T  39010208 gagaaatgatatttgtacaaccattttgtgacaact 39010173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 556
Target Start/End: Complemental strand, 40983131 - 40983088
Alignment:
Q  513 tttattaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||| ||||||||||||||||||||||||| || ||||||||    
T  40983131 tttatttagagaaatgatatttgtacaaccatattttgacaact 40983088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 565
Target Start/End: Complemental strand, 41262692 - 41262645
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctctttc 565  Q
    |||||||||||||||||||||||  || ||||||||||| ||||||||    
T  41262692 taagagaaatgatatttgtacaattattttgtgacaactttctctttc 41262645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 556
Target Start/End: Complemental strand, 51717357 - 51717318
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  51717357 ttaagagaaatgatatttgtacaaccaatttgtgacaact 51717318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 4511823 - 4511873
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||| |||||| || |||||||| ||||| ||||||    
T  4511823 aagagaaatgatatttgtataaccattttatgacaactttctctctcatac 4511873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 4896574 - 4896536
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  4896574 taagagaaatgatatttgtacaaccactttgtgacaact 4896536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Original strand, 9162063 - 9162101
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  9162063 taagagaaatgatatttgtacaatcattttgtgacaact 9162101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 554
Target Start/End: Complemental strand, 10994224 - 10994190
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    ||||||||||||||||||||||||| |||||||||    
T  10994224 agagaaatgatatttgtacaaccattttgtgacaa 10994190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 514 - 556
Target Start/End: Original strand, 11012134 - 11012176
Alignment:
Q  514 ttattaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||| ||||||||||||||||||||||||| || ||||||||    
T  11012134 ttattgagagaaatgatatttgtacaaccattttatgacaact 11012176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 554
Target Start/End: Complemental strand, 13267550 - 13267516
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    ||||||||||||||||||||||||| |||||||||    
T  13267550 agagaaatgatatttgtacaaccattttgtgacaa 13267516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 562
Target Start/End: Original strand, 32621637 - 32621679
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctct 562  Q
    |||||||||||||||| |||||||| ||||||||||| |||||    
T  32621637 agagaaatgatatttgcacaaccattttgtgacaactttctct 32621679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 563
Target Start/End: Original strand, 37547065 - 37547107
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaactatctctt 563  Q
    |||||||||||||||||||||||  ||||||||||| ||||||    
T  37547065 gagaaatgatatttgtacaaccactttgtgacaactttctctt 37547107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 562
Target Start/End: Complemental strand, 41119542 - 41119500
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctct 562  Q
    ||||||||||||||||||||||||  ||||||||||| |||||    
T  41119542 agagaaatgatatttgtacaaccactttgtgacaactttctct 41119500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 554
Target Start/End: Complemental strand, 43168786 - 43168752
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    ||||||||||||||||||||||||| |||||||||    
T  43168786 agagaaatgatatttgtacaaccattttgtgacaa 43168752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 43769721 - 43769771
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  43769721 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatac 43769771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 46686243 - 46686292
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||| |||| |||||| ||||| ||||||    
T  46686243 aagagaaatgatatttgtacaaccattttgt-acaactttctctctcatac 46686292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 5208400 - 5208363
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  5208400 aagagaaatgatatttgtacaaccaatttgtgacaact 5208363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 569
Target Start/End: Complemental strand, 29974384 - 29974339
Alignment:
Q  524 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||| ||||| || ||||||||||| ||||||||||||    
T  29974384 aaatgatatttgaacaactattttgtgacaactttctctttcatac 29974339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 30973596 - 30973645
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||||  || |||||||| | ||||||||||    
T  30973596 agagaaatgatatttgtacaaccactttatgacaactttttctttcatac 30973645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 31657657 - 31657706
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  31657657 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 31657706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 555
Target Start/End: Complemental strand, 40786391 - 40786354
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaac 555  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  40786391 taagagaaatgatatttgtacaaccattttgagacaac 40786354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 42490919 - 42490968
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||||  || |||||||| ||||| ||||||    
T  42490919 agagaaatgatatttgtacaaccactttttgacaactttctctctcatac 42490968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 519 - 589
Target Start/End: Complemental strand, 40596116 - 40596046
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactct 589  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| ||||||   |||| ||||||||||||    
T  40596116 aagagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattatattcttactct 40596046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 519 - 589
Target Start/End: Complemental strand, 43612142 - 43612072
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactct 589  Q
    |||||||||||||||||||||||||| || |||||||| ||||| |||||| | |||| ||||||||||||    
T  43612142 aagagaaatgatatttgtacaaccattttatgacaactttctctctcatacatacattatattcttactct 43612072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 569
Target Start/End: Complemental strand, 27687584 - 27687531
Alignment:
Q  516 attaagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||    
T  27687584 attaagagaaatgatatttgtacaaccattttgtgacaactttatctctcatac 27687531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 569
Target Start/End: Original strand, 34187275 - 34187323
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  34187275 gagaaatgatatttgtacaactatcttgtgaccactttctctttcatac 34187323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 569
Target Start/End: Complemental strand, 41507254 - 41507206
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatac 41507206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 49453489 - 49453539
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  49453489 aagagaaatgatatttgtacaaccactttgtgacaactttctctctcatac 49453539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 50797789 - 50797839
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||| ||||||    
T  50797789 aagagaaatgatatttgtacaatcattttgtgacaactttctctctcatac 50797839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 9011643 - 9011680
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| |||||||||||    
T  9011643 aagagaaatgatatttgtacaaccattttgtgacaact 9011680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 40612112 - 40612149
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| |||||||||||    
T  40612112 aagagaaatgatatttgtacaaccattttgtgacaact 40612149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 42256458 - 42256495
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| |||||||||||    
T  42256458 aagagaaatgatatttgtacaaccattttgtgacaact 42256495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 43757598 - 43757647
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||||| |||  |||||| ||||||||||||    
T  43757598 agagaaatgatatttgtacaaccattttgatacaactttctctttcatac 43757647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 556
Target Start/End: Original strand, 11947790 - 11947830
Alignment:
Q  516 attaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||||| || ||||||||    
T  11947790 attaagagaaatgatatttgtacaaccattttatgacaact 11947830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 569
Target Start/End: Original strand, 40139126 - 40139174
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||| || |||||||| ||||| ||||||    
T  40139126 gagaaatgatatttgtacaaccattttatgacaactttctctctcatac 40139174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 42539415 - 42539459
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctct 562  Q
    |||||||||||||||||||||||||||  |||||||||| |||||    
T  42539415 taagagaaatgatatttgtacaaccattatgtgacaactttctct 42539459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 556
Target Start/End: Complemental strand, 10435873 - 10435834
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  10435873 ttaagagaaatgatattcgtacaaccattttgtgacaact 10435834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 556
Target Start/End: Complemental strand, 29489434 - 29489395
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  29489434 ttaagagaaatgatatttgtacaaccattttgtgataact 29489395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 569
Target Start/End: Complemental strand, 33358221 - 33358170
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  33358221 taagagaaatgatatttgaacatccattttgtgacaactttctctctcatac 33358170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 554
Target Start/End: Complemental strand, 48325840 - 48325805
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    |||||||||||||||||||||||||| |||||||||    
T  48325840 aagagaaatgatatttgtacaaccattttgtgacaa 48325805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 1690444 - 1690494
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||| |||||||||||||||| ||||||||||| | ||| ||||||    
T  1690444 aagagaaataatatttgtacaaccattttgtgacaactttttctctcatac 1690494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 8200085 - 8200135
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  8200085 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatac 8200135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 11097958 - 11097920
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  11097958 taagagaaatgatatttgtacatccattttgtgacaact 11097920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 21433475 - 21433437
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  21433475 taagagaaatgatatttgtacaaccattttgtaacaact 21433437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 520 - 554
Target Start/End: Original strand, 39669805 - 39669839
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    ||||||||||||||||||||||||| |||||||||    
T  39669805 agagaaatgatatttgtacaaccattttgtgacaa 39669839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Complemental strand, 45272222 - 45272172
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||  || |||||||| ||||| ||||||    
T  45272222 aagagaaatgatatttgtacaaccactttttgacaactttctctctcatac 45272172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 46903479 - 46903529
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||| |||  |||||| ||||| ||||||    
T  46903479 aagagaaatgatatttgtacaaccattttgatacaactttctctctcatac 46903529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 50226953 - 50226915
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  50226953 taagagaaatgatatttgtacaaccactttgtgacaact 50226915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 569
Target Start/End: Complemental strand, 5477220 - 5477175
Alignment:
Q  524 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  5477220 aaatgatatttgtacaaccactttgtgacaactttctctctcatac 5477175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 18610771 - 18610808
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||| || |||||||||||    
T  18610771 aagagaaatgatatttgtacaactattttgtgacaact 18610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 556
Target Start/End: Complemental strand, 26585250 - 26585209
Alignment:
Q  515 tattaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||| || |||||| ||||    
T  26585250 tattaagagaaatgatatttgtacaactattttgtgataact 26585209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 27352628 - 27352665
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  27352628 aagagaaatgatatttgtacaaccattttgtgataact 27352665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 562
Target Start/End: Complemental strand, 34974820 - 34974779
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaactatctct 562  Q
    |||||||||||||| ||||||||| ||||||||||| |||||    
T  34974820 gagaaatgatatttatacaaccattttgtgacaactttctct 34974779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 569
Target Start/End: Original strand, 41558007 - 41558052
Alignment:
Q  524 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||| |||||||||||  |||| ||||||    
T  41558007 aaatgatatttgtacaaccattttgtgacaactcactctctcatac 41558052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 569
Target Start/End: Complemental strand, 48220204 - 48220155
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  48220204 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 48220155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 562
Target Start/End: Complemental strand, 48872088 - 48872047
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaactatctct 562  Q
    |||||||||||||||||||||||| || |||||||| |||||    
T  48872088 gagaaatgatatttgtacaaccattttttgacaactttctct 48872047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 556
Target Start/End: Complemental strand, 50035606 - 50035573
Alignment:
Q  523 gaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||| |||||||||||    
T  50035606 gaaatgatatttgtacaaccattttgtgacaact 50035573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 52669841 - 52669804
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  52669841 aagagaagtgatatttgtacaaccattttgtgacaact 52669804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 585
Target Start/End: Original strand, 2469701 - 2469767
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattctta 585  Q
    |||||||||||||||||||||||||  ||||||||||| ||||| ||||||   |||||||||||||    
T  2469701 aagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattgtattctta 2469767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 569
Target Start/End: Complemental strand, 34992397 - 34992347
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||| || |||||||| ||||||||||||    
T  34992397 aagagaaatgatatttgtacaaccattttatgacaactctctctttcatac 34992347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 521 - 556
Target Start/End: Original strand, 20406541 - 20406576
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||||||||||||    
T  20406541 gagaaatgatatttgtacaaccatcttgtgacaact 20406576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 518 - 569
Target Start/End: Complemental strand, 22330694 - 22330643
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  22330694 taagagaaatgatatttgtacaaccactttgtgacaactttctctctcatac 22330643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 556
Target Start/End: Original strand, 4971287 - 4971325
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  4971287 taagagaaatgatatttgtacaaccattttgtgacaact 4971325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 26041319 - 26041369
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||| |||||||||| || |||||||| ||||||||||||    
T  26041319 aagagaaatgatattcgtacaaccattttatgacaactttctctttcatac 26041369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 568
Target Start/End: Complemental strand, 28862144 - 28862094
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctctttcata 568  Q
    |||||||||||||||||||||| |||| || |||||||| |||||||||||    
T  28862144 taagagaaatgatatttgtacatccattttatgacaactttctctttcata 28862094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 569
Target Start/End: Complemental strand, 37352052 - 37352002
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  37352052 aagagaaatgatatttgtacaaccactttgtgacaactttctctctcatac 37352002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 37856228 - 37856190
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  37856228 taagagaaatgatatttgtacaaccattttgtgacaact 37856190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 556
Target Start/End: Original strand, 19426579 - 19426615
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||| |||||||||||    
T  19426579 agagaaatgatatttgtacaaccattttgtgacaact 19426615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 556
Target Start/End: Complemental strand, 2347130 - 2347095
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||| |||||||||||    
T  2347130 gagaaatgatatttgtacaaccattttgtgacaact 2347095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 569
Target Start/End: Complemental strand, 24044806 - 24044759
Alignment:
Q  522 agaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||  || ||||||||||| ||||||||||||    
T  24044806 agaaatgatatttgtacaattattttgtgacaactctctctttcatac 24044759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 556
Target Start/End: Original strand, 33050183 - 33050218
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||| |||||||||||    
T  33050183 gagaaatgatatttgtacaaccattttgtgacaact 33050218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 569
Target Start/End: Complemental strand, 41985163 - 41985112
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||| ||  ||||||||||| ||||| ||||||    
T  41985163 taagagaaatgatatttgtacaatcaatttgtgacaactttctctctcatac 41985112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 2323302 - 2323352
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||| || || |||||||| ||||| ||||||    
T  2323302 aagagaaatgatatttgtacaacaattttatgacaactttctctctcatac 2323352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Original strand, 44511136 - 44511174
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  44511136 taagagaaatgatattcgtacaaccattttgtgacaact 44511174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 569
Target Start/End: Complemental strand, 23680095 - 23680050
Alignment:
Q  524 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||| || ||||||||||| ||| ||||||||    
T  23680095 aaatgatatttgtacaactattttgtgacaactttctttttcatac 23680050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 25887593 - 25887642
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||| |||  ||||||||||| ||||| ||||||    
T  25887593 agagaaatgatatttgtacatccactttgtgacaactttctctctcatac 25887642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 30864490 - 30864453
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  30864490 aagagaaatgatatttgtacaaccaatttgtgacaact 30864453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 31274602 - 31274565
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  31274602 aagagaaatgatatttgtacaaccaatttgtgacaact 31274565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 33223602 - 33223565
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  33223602 aagaaaaatgatatttgtacaaccattttgtgacaact 33223565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 37392041 - 37392078
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| || ||||||||    
T  37392041 aagagaaatgatatttgtacaaccattttttgacaact 37392078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000005; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 590
Target Start/End: Original strand, 12177577 - 12177646
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactctt 590  Q
    |||||||| |||||||||||| || ||||||||||| ||||||||||||   |||| |||||||||||||    
T  12177577 gagaaatgttatttgtacaactattttgtgacaactttctctttcatactcacattatattcttactctt 12177646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 3339572 - 3339535
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| |||||||||||    
T  3339572 aagagaaatgatatttgtacaaccattttgtgacaact 3339535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 551
Target Start/End: Complemental strand, 237471 - 237439
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtga 551  Q
    |||||||||||||||||||||||||||||||||    
T  237471 aagagaaatgatatttgtacaaccatcttgtga 237439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 569
Target Start/End: Original strand, 2862057 - 2862105
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||| ||||||||||||| |||||||||||||||| ||| ||||||    
T  2862057 gagaaataatatttgtacaactatcttgtgacaactatttctctcatac 2862105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 569
Target Start/End: Original strand, 2881308 - 2881356
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||| ||||||||||||| |||||||||||||||| ||| ||||||    
T  2881308 gagaaataatatttgtacaactatcttgtgacaactatttctctcatac 2881356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 569
Target Start/End: Original strand, 28748120 - 28748172
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  28748120 ttaagagaaatgatatttgaacatccattttgtgacaactttctctctcatac 28748172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 554
Target Start/End: Original strand, 11785353 - 11785388
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    |||||||||||||||||||||||||| |||||||||    
T  11785353 aagagaaatgatatttgtacaaccattttgtgacaa 11785388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 556
Target Start/End: Complemental strand, 15666848 - 15666809
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  15666848 ttaagagaaatgatatttgtacaaccattttctgacaact 15666809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 1897695 - 1897745
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||  || |||||||| |||||| |||||    
T  1897695 aagagaaatgatatttgtacaaccactttatgacaactttctcttacatac 1897745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Original strand, 3088970 - 3089008
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  3088970 taagagaaatgatatttgtacaaccatttagtgacaact 3089008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 12441536 - 12441586
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||| |  ||||||||||| ||||| ||||||    
T  12441536 aagagaaatgatatttgtacaactactttgtgacaactttctctctcatac 12441586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 28965914 - 28965876
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  28965914 taagagaaatgatatttgtacaaccattttgttacaact 28965876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 32149498 - 32149548
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||| |||||||||||||||  ||||||||||| ||||| ||||||    
T  32149498 aagagaaataatatttgtacaaccactttgtgacaactttctctctcatac 32149548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 15722576 - 15722539
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  15722576 aagagaaatgatatttgtacaatcattttgtgacaact 15722539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 25127906 - 25127869
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  25127906 aagagaaatgatatttgtacaaccattttgtaacaact 25127869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 27334856 - 27334893
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||| || |||||||||||    
T  27334856 aagagaaatgatatttgtacaactattttgtgacaact 27334893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 27395596 - 27395633
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||| || |||||||||||    
T  27395596 aagagaaatgatatttgtacaactattttgtgacaact 27395633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 32729887 - 32729924
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| || ||||||||    
T  32729887 aagagaaatgatatttgtacaaccattttctgacaact 32729924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000005; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 520 - 569
Target Start/End: Complemental strand, 9834142 - 9834093
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||| ||||||||| || |||||||||||||||||||||    
T  9834142 agagaaatgatatttatacaaccattttatgacaactatctctttcatac 9834093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 29795444 - 29795488
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctct 562  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||    
T  29795444 taagagaaatgatatttgtacaaccattttgtgacaactttctct 29795488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 514 - 556
Target Start/End: Original strand, 5031916 - 5031958
Alignment:
Q  514 ttattaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||||||| |||| ||||||    
T  5031916 ttattaagagaaatgatatttgtacaaccattttgtaacaact 5031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 564
Target Start/End: Complemental strand, 42283312 - 42283267
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctcttt 564  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||    
T  42283312 aagagaaatgatatttgtacaaccactttgtgacaactctctcttt 42283267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 569
Target Start/End: Complemental strand, 3012909 - 3012857
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  3012909 ttaagagaaatgatatttgaacatccattttgtgacaactttctctctcatac 3012857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 3299181 - 3299141
Alignment:
Q  516 attaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||||| || ||||||||    
T  3299181 attaagagaaatgatatttgtacaaccattttatgacaact 3299141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 587
Target Start/End: Complemental strand, 4263925 - 4263858
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttact 587  Q
    |||||||||||||||||||||| ||| || |||||||| ||||||||||||   |||| ||||||||||    
T  4263925 aagagaaatgatatttgtacaa-cattttttgacaactttctctttcatactcacattatattcttact 4263858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 555
Target Start/End: Complemental strand, 31296918 - 31296882
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaac 555  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31296918 aagagaaatgatatttgtacaaccattttgtgacaac 31296882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 554
Target Start/End: Complemental strand, 35171300 - 35171264
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    ||||||||||||||||||||||||||| |||||||||    
T  35171300 taagagaaatgatatttgtacaaccattttgtgacaa 35171264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 556
Target Start/End: Complemental strand, 36909915 - 36909879
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36909915 agagaaatgatatttgtacaaccattttgtgacaact 36909879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 544
Target Start/End: Complemental strand, 1052575 - 1052544
Alignment:
Q  513 tttattaagagaaatgatatttgtacaaccat 544  Q
    ||||||||||||||||||||||||||||||||    
T  1052575 tttattaagagaaatgatatttgtacaaccat 1052544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 555
Target Start/End: Original strand, 4344449 - 4344483
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaac 555  Q
    |||||||||||||||||||||||| ||||||||||    
T  4344449 gagaaatgatatttgtacaaccattttgtgacaac 4344483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 6646833 - 6646883
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  6646833 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatac 6646883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Original strand, 29168722 - 29168760
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  29168722 taagagaaatgatatttgtacaaccattttttgacaact 29168760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 33296145 - 33296107
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  33296145 taagagaaatgatatttgtacaaccactttgtgacaact 33296107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 4738645 - 4738608
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  4738645 aagagaaatgatatttgtacaaccactttgtgacaact 4738608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 568
Target Start/End: Complemental strand, 8482294 - 8482245
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcata 568  Q
    |||||||||||||||||||||||||  || |||||||| ||||| |||||    
T  8482294 aagagaaatgatatttgtacaaccactttatgacaactttctctctcata 8482245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 569
Target Start/End: Complemental strand, 22353236 - 22353187
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||| ||| ||||||||||| ||| | ||||||    
T  22353236 agagaaatgatatttgtacaatcattttgtgacaactttctttctcatac 22353187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 28508477 - 28508514
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  28508477 aagagtaatgatatttgtacaaccattttgtgacaact 28508514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 37966366 - 37966415
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||||  ||||||||||| | ||| ||||||    
T  37966366 agagaaatgatatttgtacaaccaatttgtgacaactttttctctcatac 37966415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 517 - 569
Target Start/End: Complemental strand, 31664 - 31612
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||||||||||||| || |||||||| ||||| ||||||    
T  31664 ttaagagaaatgatatttgtacaaccattttttgacaactttctctctcatac 31612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000007; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 518 - 569
Target Start/End: Complemental strand, 37392191 - 37392140
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||||||| || |||||||| ||||| ||||||    
T  37392191 taagagaaatgatatttgtacaaccattttttgacaactttctctctcatac 37392140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 587
Target Start/End: Original strand, 157065 - 157133
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttact 587  Q
    |||| ||||||||||||||||||||| ||| ||||||| ||||| |||||| | |||| |||| |||||    
T  157065 aagataaatgatatttgtacaaccattttgcgacaactttctctctcatacttacattatatttttact 157133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 568
Target Start/End: Original strand, 5502370 - 5502418
Alignment:
Q  520 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcata 568  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| |||||    
T  5502370 agagaaatgatatttgtacaaccactttgtgacaactttctctctcata 5502418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 513 - 569
Target Start/End: Complemental strand, 14710961 - 14710905
Alignment:
Q  513 tttattaagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||| |||| ||||||||||||||||| ||| ||||||||||| ||||| ||||||    
T  14710961 tttataaagataaatgatatttgtacaatcattttgtgacaactttctctctcatac 14710905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 569
Target Start/End: Complemental strand, 30439569 - 30439517
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  30439569 ttaagagaaatgatatttgaacatccattttgtgacaactttctctctcatac 30439517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 38844866 - 38844826
Alignment:
Q  516 attaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||| |||||||||||||||||||||||| |||||||||||    
T  38844866 attatgagaaatgatatttgtacaaccattttgtgacaact 38844826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 39021519 - 39021479
Alignment:
Q  516 attaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  39021519 attaagagaaatgatatttgtacaaccattttgtgataact 39021479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 555
Target Start/End: Complemental strand, 44380687 - 44380651
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaac 555  Q
    |||||||||||||||||||||||||| ||||||||||    
T  44380687 aagagaaatgatatttgtacaaccattttgtgacaac 44380651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 556
Target Start/End: Complemental strand, 21273781 - 21273746
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||| |||||||||||    
T  21273781 gagaaatgatatttgtacaaccattttgtgacaact 21273746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 556
Target Start/End: Complemental strand, 22852914 - 22852875
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  22852914 ttaagagaaatgatatttgtacaaccactttgtgacaact 22852875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 556
Target Start/End: Original strand, 36497657 - 36497696
Alignment:
Q  517 ttaagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  36497657 ttaagagaaatgatatttgtacaactattttgtgacaact 36497696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 11223933 - 11223895
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  11223933 taagagaaatgatatttgtacatccattttgtgacaact 11223895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 556
Target Start/End: Complemental strand, 38128850 - 38128812
Alignment:
Q  518 taagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  38128850 taagagaaatgacatttgtacaaccattttgtgacaact 38128812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Complemental strand, 40413411 - 40413361
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||||||||  || ||||||||||| ||||| ||||||    
T  40413411 aagagaaatgatatttgtacaattattttgtgacaactttctctctcatac 40413361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 41934990 - 41935040
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||| ||||||||||||||| ||||||||| | ||||| ||||||    
T  41934990 aagagaaatggtatttgtacaaccattttgtgacaattttctctctcatac 41935040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 5771949 - 5771912
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  5771949 aagagaaatgatatttgaacaaccattttgtgacaact 5771912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 569
Target Start/End: Original strand, 11138910 - 11138955
Alignment:
Q  524 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    |||||||||||||||||| || ||||||||||| ||||| ||||||    
T  11138910 aaatgatatttgtacaactattttgtgacaactttctctctcatac 11138955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 12045726 - 12045689
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||| | |||||||||    
T  12045726 aagagaaatgatatttgtacaaccatttagtgacaact 12045689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 20288531 - 20288568
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  20288531 aagagaaatgatatttgtacaaccaatttgtgacaact 20288568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 21075160 - 21075197
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  21075160 aagagaaatgatatttgtacaaccaatttgtgacaact 21075197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 26294187 - 26294224
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  26294187 aagagaaatgatattggtacaaccattttgtgacaact 26294224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 26307444 - 26307481
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  26307444 aagagaaatgatattggtacaaccattttgtgacaact 26307481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 28927679 - 28927716
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  28927679 aagagaaatgatatttgtacaaccactttgtgacaact 28927716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 554
Target Start/End: Complemental strand, 43873762 - 43873729
Alignment:
Q  521 gagaaatgatatttgtacaaccatcttgtgacaa 554  Q
    |||||||||||||||||||||||| |||||||||    
T  43873762 gagaaatgatatttgtacaaccattttgtgacaa 43873729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 567
Target Start/End: Original strand, 44607702 - 44607747
Alignment:
Q  522 agaaatgatatttgtacaaccatcttgtgacaactatctctttcat 567  Q
    ||||||||||||||||||||||| | ||||||||| ||||| ||||    
T  44607702 agaaatgatatttgtacaaccatttggtgacaactttctctctcat 44607747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Original strand, 45101394 - 45101431
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  45101394 aagagaaatgatatttgtacaaccactttgtgacaact 45101431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 569
Target Start/End: Original strand, 44784 - 44834
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 569  Q
    ||||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  44784 aagagaaatgatatttgaacatccattttgtgacaactttctctctcatac 44834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 8380 - 8343
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  8380 aagagaaattatatttgtacaaccattttgtgacaact 8343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 556
Target Start/End: Complemental strand, 219737 - 219700
Alignment:
Q  519 aagagaaatgatatttgtacaaccatcttgtgacaact 556  Q
    |||||||||||||||||||||||||  |||||||||||    
T  219737 aagagaaatgatatttgtacaaccactttgtgacaact 219700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University