View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19675_high_1 (Length: 1065)

Name: NF19675_high_1
Description: NF19675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19675_high_1
NF19675_high_1
[»] chr7 (68 HSPs)
chr7 (639-1057)||(42302649-42303066)
chr7 (18-370)||(42303261-42303613)
chr7 (250-369)||(9822169-9822288)
chr7 (250-369)||(10724094-10724213)
chr7 (183-372)||(39182046-39182235)
chr7 (438-551)||(42303154-42303267)
chr7 (183-385)||(15681728-15681932)
chr7 (250-369)||(3403120-3403240)
chr7 (248-362)||(5087118-5087233)
chr7 (184-375)||(26385370-26385562)
chr7 (183-381)||(25002810-25003007)
chr7 (170-369)||(20636735-20636933)
chr7 (252-381)||(4193653-4193783)
chr7 (183-381)||(11843180-11843378)
chr7 (176-381)||(13577782-13577986)
chr7 (177-381)||(48175958-48176163)
chr7 (202-362)||(6650632-6650793)
chr7 (251-375)||(26126363-26126488)
chr7 (170-369)||(27869185-27869383)
chr7 (260-385)||(39440199-39440326)
chr7 (251-369)||(41452319-41452437)
chr7 (248-369)||(36746570-36746691)
chr7 (251-348)||(10023855-10023952)
chr7 (251-366)||(7365341-7365457)
chr7 (251-369)||(35337592-35337710)
chr7 (183-369)||(31494026-31494212)
chr7 (251-369)||(21224422-21224540)
chr7 (251-365)||(33237484-33237598)
chr7 (251-368)||(19493435-19493552)
chr7 (184-369)||(3562436-3562621)
chr7 (248-369)||(17305880-17306002)
chr7 (177-369)||(24597513-24597703)
chr7 (205-373)||(4571377-4571536)
chr7 (302-381)||(5111542-5111621)
chr7 (255-381)||(14624706-14624832)
chr7 (251-369)||(19195283-19195401)
chr7 (248-369)||(24464691-24464813)
chr7 (248-369)||(42271448-42271569)
chr7 (251-342)||(10655471-10655563)
chr7 (183-369)||(8526912-8527096)
chr7 (272-369)||(23439709-23439807)
chr7 (253-369)||(44077942-44078059)
chr7 (248-358)||(5348153-5348265)
chr7 (253-381)||(21225621-21225748)
chr7 (183-369)||(24448047-24448232)
chr7 (255-369)||(2331129-2331243)
chr7 (248-306)||(9157096-9157154)
chr7 (250-369)||(43251380-43251501)
chr7 (313-381)||(9157183-9157251)
chr7 (250-365)||(3148043-3148158)
chr7 (251-369)||(18754336-18754454)
chr7 (251-369)||(19919673-19919791)
chr7 (272-369)||(23473105-23473203)
chr7 (312-369)||(6798014-6798071)
chr7 (183-276)||(5111619-5111712)
chr7 (184-239)||(18754512-18754567)
chr7 (272-369)||(23461112-23461210)
chr7 (278-362)||(38722900-38722986)
chr7 (285-362)||(47113237-47113315)
chr7 (248-297)||(15093818-15093867)
chr7 (281-359)||(9154398-9154478)
chr7 (281-362)||(14196923-14197006)
chr7 (820-871)||(4411507-4411558)
chr7 (184-239)||(23658777-23658831)
chr7 (172-239)||(48176208-48176275)
chr7 (313-375)||(29051728-29051789)
chr7 (178-239)||(26385260-26385321)
chr7 (820-913)||(27964649-27964740)
[»] chr5 (37 HSPs)
chr5 (676-1054)||(2368872-2369256)
chr5 (18-381)||(2373248-2373612)
chr5 (183-373)||(38476472-38476662)
chr5 (382-551)||(2372684-2372857)
chr5 (184-369)||(40428642-40428827)
chr5 (183-369)||(18695119-18695304)
chr5 (183-369)||(25556879-25557063)
chr5 (183-369)||(16900999-16901185)
chr5 (250-381)||(17825566-17825698)
chr5 (250-369)||(37961317-37961437)
chr5 (250-373)||(41663592-41663716)
chr5 (251-369)||(31055384-31055502)
chr5 (183-369)||(245710-245896)
chr5 (248-369)||(34125175-34125297)
chr5 (184-369)||(16307480-16307664)
chr5 (184-369)||(23039954-23040137)
chr5 (251-369)||(26639107-26639225)
chr5 (177-369)||(38408744-38408935)
chr5 (251-381)||(10379385-10379515)
chr5 (252-369)||(36641259-36641376)
chr5 (251-369)||(19169459-19169577)
chr5 (177-296)||(31648173-31648292)
chr5 (248-369)||(35301982-35302103)
chr5 (264-381)||(17704670-17704787)
chr5 (255-375)||(462875-462996)
chr5 (255-369)||(10293161-10293275)
chr5 (278-362)||(18739837-18739923)
chr5 (278-362)||(38545373-38545459)
chr5 (177-230)||(20654049-20654102)
chr5 (250-362)||(8673926-8674038)
chr5 (183-230)||(31576495-31576542)
chr5 (181-233)||(15885415-15885467)
chr5 (184-239)||(32466078-32466133)
chr5 (267-329)||(7187344-7187406)
chr5 (278-362)||(20732628-20732713)
chr5 (183-233)||(26639289-26639339)
chr5 (201-238)||(2186790-2186827)
[»] chr6 (39 HSPs)
chr6 (775-1052)||(14208263-14208533)
chr6 (18-180)||(14208584-14208746)
chr6 (172-369)||(26240072-26240270)
chr6 (183-369)||(35102493-35102679)
chr6 (201-369)||(12291437-12291606)
chr6 (184-369)||(4597408-4597593)
chr6 (248-369)||(34528263-34528385)
chr6 (255-381)||(22269510-22269636)
chr6 (252-369)||(25819800-25819917)
chr6 (183-369)||(16415335-16415519)
chr6 (255-369)||(9241767-9241882)
chr6 (201-369)||(18791473-18791641)
chr6 (250-369)||(32451842-32451961)
chr6 (251-369)||(31210910-31211028)
chr6 (251-369)||(34834041-34834159)
chr6 (248-369)||(24603477-24603598)
chr6 (250-369)||(3118795-3118914)
chr6 (255-358)||(23124794-23124898)
chr6 (264-369)||(19282296-19282399)
chr6 (251-355)||(20863798-20863903)
chr6 (185-369)||(14572182-14572366)
chr6 (250-369)||(22968225-22968342)
chr6 (250-369)||(23820051-23820168)
chr6 (250-381)||(4371001-4371127)
chr6 (251-369)||(24051124-24051242)
chr6 (251-369)||(15298601-15298718)
chr6 (251-337)||(2058904-2058991)
chr6 (251-369)||(26710378-26710495)
chr6 (250-369)||(2636892-2637013)
chr6 (250-369)||(12427347-12427468)
chr6 (251-371)||(18749166-18749286)
chr6 (305-365)||(4013791-4013851)
chr6 (291-369)||(8412874-8412952)
chr6 (252-369)||(14195675-14195792)
chr6 (183-239)||(4013911-4013967)
chr6 (252-381)||(24615764-24615894)
chr6 (183-239)||(22269412-22269468)
chr6 (178-239)||(18791355-18791416)
chr6 (178-239)||(24051006-24051067)
[»] chr3 (47 HSPs)
chr3 (18-169)||(45043665-45043816)
chr3 (248-369)||(22416449-22416571)
chr3 (183-369)||(26628027-26628213)
chr3 (203-373)||(36311262-36311433)
chr3 (191-381)||(23320464-23320654)
chr3 (177-365)||(34878525-34878713)
chr3 (183-369)||(3328815-3329001)
chr3 (178-369)||(28173726-28173917)
chr3 (251-369)||(48907362-48907480)
chr3 (183-369)||(23428621-23428807)
chr3 (251-369)||(27852822-27852939)
chr3 (183-369)||(28154884-28155070)
chr3 (178-371)||(13081008-13081201)
chr3 (178-369)||(1743365-1743556)
chr3 (251-369)||(4522070-4522188)
chr3 (251-369)||(8542726-8542844)
chr3 (251-373)||(25022733-25022855)
chr3 (183-369)||(8338942-8339128)
chr3 (183-369)||(20001825-20002009)
chr3 (172-362)||(32960636-32960823)
chr3 (251-374)||(10743518-10743641)
chr3 (250-369)||(30155214-30155333)
chr3 (183-365)||(40836182-40836363)
chr3 (251-362)||(6927593-6927704)
chr3 (252-381)||(31039048-31039178)
chr3 (273-381)||(3780982-3781090)
chr3 (251-369)||(46673117-46673235)
chr3 (251-342)||(46387651-46387743)
chr3 (255-381)||(26633433-26633559)
chr3 (182-369)||(32315035-32315220)
chr3 (273-362)||(3821004-3821094)
chr3 (251-369)||(26126976-26127094)
chr3 (251-369)||(33279655-33279773)
chr3 (248-369)||(35201062-35201184)
chr3 (183-369)||(22447742-22447932)
chr3 (251-369)||(25179694-25179810)
chr3 (254-369)||(25336471-25336587)
chr3 (251-369)||(22500665-22500783)
chr3 (251-369)||(26177026-26177144)
chr3 (272-346)||(43668566-43668641)
chr3 (251-366)||(33105059-33105175)
chr3 (18-61)||(30478757-30478800)
chr3 (177-230)||(36311148-36311201)
chr3 (251-369)||(48860818-48860937)
chr3 (253-338)||(20626794-20626880)
chr3 (820-913)||(32075978-32076069)
chr3 (201-238)||(54987051-54987088)
[»] chr8 (40 HSPs)
chr8 (181-381)||(3208083-3208283)
chr8 (255-375)||(18252960-18253081)
chr8 (172-369)||(18881495-18881692)
chr8 (249-381)||(1824708-1824840)
chr8 (249-381)||(1859153-1859285)
chr8 (251-369)||(38630171-38630289)
chr8 (250-372)||(4423099-4423221)
chr8 (183-369)||(19391390-19391575)
chr8 (251-369)||(21666344-21666462)
chr8 (177-369)||(33895490-33895681)
chr8 (252-369)||(19924381-19924498)
chr8 (382-479)||(2755495-2755591)
chr8 (184-369)||(30784268-30784452)
chr8 (251-369)||(4518938-4519055)
chr8 (251-369)||(5192341-5192459)
chr8 (175-369)||(8802394-8802587)
chr8 (187-364)||(15869343-15869522)
chr8 (250-381)||(7117183-7117316)
chr8 (177-369)||(44147087-44147278)
chr8 (255-369)||(17648359-17648473)
chr8 (183-369)||(4807602-4807788)
chr8 (252-369)||(22452244-22452361)
chr8 (273-369)||(41688202-41688299)
chr8 (251-369)||(12723331-12723449)
chr8 (176-307)||(21929842-21929973)
chr8 (272-369)||(32400413-32400510)
chr8 (770-876)||(43720518-43720624)
chr8 (250-373)||(31268390-31268514)
chr8 (260-369)||(41385569-41385679)
chr8 (248-348)||(23565225-23565326)
chr8 (426-498)||(2747424-2747499)
chr8 (820-913)||(14836949-14837040)
chr8 (309-358)||(17857061-17857110)
chr8 (184-239)||(5192517-5192572)
chr8 (272-360)||(16233581-16233671)
chr8 (278-362)||(8137635-8137721)
chr8 (200-229)||(4423048-4423077)
chr8 (172-229)||(7117369-7117426)
chr8 (178-239)||(19392812-19392873)
chr8 (943-1000)||(43720697-43720754)
[»] scaffold0002 (2 HSPs)
scaffold0002 (183-369)||(455142-455330)
scaffold0002 (307-369)||(455046-455108)
[»] chr4 (44 HSPs)
chr4 (183-369)||(4098772-4098958)
chr4 (250-375)||(6209308-6209436)
chr4 (183-369)||(43793633-43793819)
chr4 (252-369)||(51291240-51291358)
chr4 (184-369)||(27018330-27018516)
chr4 (251-369)||(13826489-13826607)
chr4 (183-358)||(20919337-20919511)
chr4 (248-370)||(24626287-24626410)
chr4 (251-362)||(25618698-25618809)
chr4 (252-362)||(36729159-36729270)
chr4 (183-369)||(5304349-5304535)
chr4 (248-369)||(35475405-35475526)
chr4 (251-369)||(13397745-13397863)
chr4 (255-369)||(15058892-15059006)
chr4 (251-369)||(19232413-19232532)
chr4 (251-381)||(1588484-1588613)
chr4 (251-369)||(4357368-4357486)
chr4 (252-369)||(41877099-41877214)
chr4 (251-369)||(45633553-45633670)
chr4 (272-385)||(2715808-2715921)
chr4 (183-306)||(13394538-13394661)
chr4 (770-1000)||(28021944-28022180)
chr4 (251-369)||(25011851-25011969)
chr4 (251-348)||(6789028-6789126)
chr4 (303-381)||(9195787-9195864)
chr4 (251-385)||(41034735-41034868)
chr4 (251-328)||(47869811-47869888)
chr4 (251-362)||(14804441-14804553)
chr4 (255-369)||(9397307-9397421)
chr4 (253-369)||(15795433-15795549)
chr4 (252-371)||(2931435-2931553)
chr4 (251-369)||(4433253-4433371)
chr4 (251-369)||(52838344-52838463)
chr4 (174-228)||(10448314-10448368)
chr4 (285-381)||(55780490-55780586)
chr4 (285-381)||(55844670-55844766)
chr4 (183-239)||(25011737-25011793)
chr4 (184-239)||(6209487-6209542)
chr4 (278-362)||(32335946-32336032)
chr4 (178-239)||(5304591-5304652)
chr4 (178-239)||(9195908-9195969)
chr4 (290-362)||(14784668-14784741)
chr4 (281-369)||(23362547-23362635)
chr4 (177-230)||(41877279-41877332)
[»] scaffold0174 (1 HSPs)
scaffold0174 (251-381)||(29819-29950)
[»] chr1 (41 HSPs)
chr1 (253-381)||(29182072-29182201)
chr1 (183-381)||(43706656-43706854)
chr1 (252-358)||(16551714-16551821)
chr1 (178-369)||(16971966-16972157)
chr1 (250-381)||(21185308-21185438)
chr1 (183-369)||(24196377-24196563)
chr1 (252-369)||(22786145-22786260)
chr1 (251-369)||(19077995-19078113)
chr1 (251-369)||(19125885-19126003)
chr1 (177-348)||(27092849-27093020)
chr1 (183-373)||(2260380-2260571)
chr1 (183-369)||(48471865-48472051)
chr1 (731-850)||(19789726-19789846)
chr1 (183-369)||(4059524-4059710)
chr1 (184-369)||(4455045-4455231)
chr1 (248-373)||(18606751-18606876)
chr1 (183-369)||(46432218-46432404)
chr1 (248-369)||(9387809-9387933)
chr1 (251-369)||(24962069-24962187)
chr1 (251-367)||(3616917-3617033)
chr1 (251-371)||(24749912-24750032)
chr1 (184-306)||(21148126-21148248)
chr1 (177-369)||(2425339-2425531)
chr1 (250-369)||(29676195-29676314)
chr1 (251-369)||(2657583-2657700)
chr1 (251-351)||(9554271-9554372)
chr1 (251-369)||(47685217-47685335)
chr1 (252-348)||(28920727-28920825)
chr1 (906-968)||(19789896-19789957)
chr1 (181-239)||(28552305-28552363)
chr1 (174-239)||(24196254-24196319)
chr1 (180-306)||(26605278-26605402)
chr1 (313-369)||(10684909-10684965)
chr1 (251-342)||(51719192-51719284)
chr1 (178-239)||(28920897-28920958)
chr1 (183-239)||(16878931-16878987)
chr1 (280-356)||(16858458-16858536)
chr1 (252-369)||(31084683-31084800)
chr1 (202-239)||(6285187-6285224)
chr1 (172-229)||(18606939-18606996)
chr1 (177-238)||(51685809-51685870)
[»] scaffold1875 (1 HSPs)
scaffold1875 (183-369)||(758-945)
[»] scaffold0291 (1 HSPs)
scaffold0291 (183-381)||(10024-10225)
[»] chr2 (29 HSPs)
chr2 (251-375)||(28365619-28365744)
chr2 (252-381)||(26829160-26829290)
chr2 (176-371)||(18537824-18538018)
chr2 (171-369)||(15700863-15701060)
chr2 (183-369)||(22191162-22191347)
chr2 (183-369)||(15735180-15735365)
chr2 (184-385)||(36464371-36464572)
chr2 (251-369)||(9051098-9051215)
chr2 (248-369)||(9787675-9787796)
chr2 (175-369)||(25884172-25884366)
chr2 (250-369)||(4104893-4105013)
chr2 (177-369)||(30714271-30714462)
chr2 (174-369)||(11176023-11176218)
chr2 (251-369)||(17368332-17368450)
chr2 (251-369)||(38716309-38716427)
chr2 (208-369)||(2986802-2986963)
chr2 (251-369)||(25298871-25298989)
chr2 (251-369)||(6763787-6763905)
chr2 (272-385)||(14743416-14743531)
chr2 (255-306)||(22387141-22387192)
chr2 (248-345)||(21773399-21773496)
chr2 (820-913)||(32280552-32280643)
chr2 (278-362)||(2123497-2123583)
chr2 (277-369)||(2190648-2190741)
chr2 (260-381)||(12350116-12350236)
chr2 (183-239)||(15735066-15735122)
chr2 (177-239)||(4587856-4587918)
chr2 (303-369)||(4587977-4588042)
chr2 (178-239)||(18538074-18538135)
[»] scaffold0062 (2 HSPs)
scaffold0062 (171-369)||(49775-49972)
scaffold0062 (171-369)||(62314-62511)
[»] scaffold0171 (1 HSPs)
scaffold0171 (183-353)||(9163-9335)
[»] scaffold0607 (1 HSPs)
scaffold0607 (251-369)||(2119-2237)
[»] scaffold0025 (2 HSPs)
scaffold0025 (251-381)||(19386-19516)
scaffold0025 (251-369)||(61930-62050)
[»] scaffold0024 (1 HSPs)
scaffold0024 (184-363)||(43827-44007)
[»] scaffold0419 (1 HSPs)
scaffold0419 (183-369)||(2963-3148)
[»] scaffold0179 (1 HSPs)
scaffold0179 (183-369)||(5652-5837)
[»] scaffold0150 (1 HSPs)
scaffold0150 (251-369)||(5948-6065)
[»] scaffold0014 (1 HSPs)
scaffold0014 (250-369)||(112242-112362)
[»] scaffold0001 (1 HSPs)
scaffold0001 (251-369)||(142017-142135)
[»] scaffold0064 (1 HSPs)
scaffold0064 (278-362)||(54492-54576)
[»] scaffold0007 (1 HSPs)
scaffold0007 (251-366)||(250588-250703)
[»] scaffold0406 (1 HSPs)
scaffold0406 (251-369)||(2107-2225)
[»] scaffold0087 (1 HSPs)
scaffold0087 (251-369)||(25034-25152)
[»] scaffold0060 (1 HSPs)
scaffold0060 (251-369)||(66290-66408)
[»] scaffold0103 (1 HSPs)
scaffold0103 (250-369)||(2996-3117)
[»] scaffold0005 (2 HSPs)
scaffold0005 (251-362)||(35174-35286)
scaffold0005 (290-362)||(54989-55062)
[»] scaffold0267 (1 HSPs)
scaffold0267 (263-369)||(3650-3756)
[»] scaffold0683 (1 HSPs)
scaffold0683 (251-306)||(5191-5246)
[»] scaffold0474 (1 HSPs)
scaffold0474 (272-330)||(8071-8130)
[»] scaffold1202 (1 HSPs)
scaffold1202 (308-369)||(1902-1962)


Alignment Details
Target: chr7 (Bit Score: 357; Significance: 0; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 639 - 1057
Target Start/End: Complemental strand, 42303066 - 42302649
Alignment:
Q  639 gcttaaggttataatgtctatttccaatccnnnnnnnatgagttggagaaatgcaaagatatgttatttcccctgttcaagttgttgtttggattcatca 738  Q
    ||||||||||||||||||||||| ||||||       |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42303066 gcttaaggttataatgtctattttcaatcctttttt-atgagttggagaaatgcaaagatatgttatttcccctgttcaagatgttgtttggattcatca 42302968  T
Q  739 gcttttgggtaatttttccatcttcaattatttcttattttacatgtttgatcgaatgcctcatggatttacttttacaaatcatgttctttttgggtta 838  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42302967 gcttttgggtaatttttccatcttcaattatttcttattttacatgtttgatcgaatgcctcatggatttacttttacaactcatgttctttttgggtta 42302868  T
Q  839 caaatgtgtgttatgtatttaggctttgaaattgtctccaagtcttgttaaattcttcaatgaatccttttatttaagttgtgaattcaattctctaaca 938  Q
    |||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42302867 caaatgtgtgttttatatttaggctttgaaattgtctccaagtcctgttaaattcttcaatgaatccttttatttaagttgttaattcaattctctaaca 42302768  T
Q  939 ccattatgcaagggattgagaagagataaaacatggctcttgattttgttttatttatctggattttttgtaggatatactccgttctgaaaggtagtac 1038  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42302767 ccattatgcaagggattgagaagagataaaacaaggctcttgattttgttttatttatctggattttttgtaagatatactccgttctgaaaggtagtac 42302668  T
Q  1039 taacaaactactctctgct 1057  Q
    |||||||||||||||||||    
T  42302667 taacaaactactctctgct 42302649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 18 - 370
Target Start/End: Complemental strand, 42303613 - 42303261
Alignment:
Q  18 caattttctataaatattatttttggcaatgaattaggtagttggtaggcaagaattatgtgatttcctttccttctggtggtgtttagttgaaggtaca 117  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  42303613 caattttctataaatattgtttttggcaatgaattaggtagttggtaggtaagaattatgtgatgtcctttccttctggtagtgtttagttgaaggtaca 42303514  T
Q  118 actatatttgtcctaattttgcattaatctctttgaattttgcaattgaatcattaaaatttagactaaactgcacttctcgacccctaagtttcaaaaa 217  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42303513 gttatatttgtcctaattttgcattaatctctttgaattttgcaattgaatcattaaaatttaggctaaactgcacttctcgacccctaagtttcaaaaa 42303414  T
Q  218 gttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataat 317  Q
    |||||||||||||||||||||||       ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  42303413 gttgcgattttggtcctctatttaaaaaaatgacaattttggccccttttgtctcaaaattgctgagaagacaccacgtgtcccaaaaaggggtcatgat 42303314  T
Q  318 tgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttat 370  Q
     |||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  42303313 cgcaagtttttgagaagataaggggtcaaaagatcatatttcccttatattat 42303261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 250 - 369
Target Start/End: Original strand, 9822169 - 9822288
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  9822169 acaattttagcccctttcgtcccaaaattgctgagaagacgccatgtgtcccaaaaaggggtcataatcgcaactttttgagaagataaggggtcaaaag 9822268  T
Q  350 atcatatttcccttatgtta 369  Q
    ||| ||||||||||||||||    
T  9822269 atcgtatttcccttatgtta 9822288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 250 - 369
Target Start/End: Original strand, 10724094 - 10724213
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  10724094 acaattttagcccctttcgtcccaaaattgctgagaagacgccatgtgtcccaaaaaggggtcataatcgcaactttttgagaagataaggggtcaaaag 10724193  T
Q  350 atcatatttcccttatgtta 369  Q
    ||| ||||||||||||||||    
T  10724194 atcgtatttcccttatgtta 10724213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 183 - 372
Target Start/End: Complemental strand, 39182235 - 39182046
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| ||||||||||| |||| ||||| ||||||  || |||||        ||||||||||||||||||| ||| |||||||||||    
T  39182235 ctaaactgcacttttcgccccctaagtttaaaaatgttgcaattttgaccccctatt-aaaaaaatgacaattttggccccttttgtcccaaaattgctg 39182137  T
Q  283 agaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgg 372  Q
    |||| || ||||||||||||||| || || |||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39182136 agaaaacaccacgtgtcccaaaacagaggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatgg 39182046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 438 - 551
Target Start/End: Complemental strand, 42303267 - 42303154
Alignment:
Q  438 atattattaatgttgtttctctgtattagactcgttgtagggattcaaagtttaattttcaaaaaagggggatcgattcgtgaattaaattagaagtaaa 537  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||    
T  42303267 atattattaatgttgtttctctgtattagactcattgtaaggattcaaagtttaattttcaaaaaagggggattgattcatgaaataaattagaagtgaa 42303168  T
Q  538 ttaccaatattgaa 551  Q
    || |||||||||||    
T  42303167 tttccaatattgaa 42303154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 183 - 385
Target Start/End: Complemental strand, 15681932 - 15681728
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||| |  ||| |        | ||||||||||||||||||||| |||||||  ||    
T  15681932 ctaaactgcacttttagacccctaagtttcaaaatgttgcgattttggcctcctaataaaaaaaattacaattttggcccctttcgtcccaaaatttatg 15681833  T
Q  283 agaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta-tgggtcgaaag 380  Q
    |||||||||||||||||||| ||||| || |||||| |||| ||||||| ||||||||||| |||||||||||| |||||||||||||  ||||| ||||    
T  15681832 agaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgacaagataaggggtcaaaagatcatagttcccttatgttagggggtcaaaag 15681733  T
Q  381 atcat 385  Q
    |||||    
T  15681732 atcat 15681728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 250 - 369
Target Start/End: Original strand, 3403120 - 3403240
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaagg-ggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||||| ||||||||||| | ||||||||| ||||||||||||||| |||||||  |||||    
T  3403120 acaattttggcccctttcgtcccaaaattcctgaggagacgccacatgtcccaaaaaagtggtcataatcgcaagtttttgagaacataagggatcaaaa 3403219  T
Q  349 gatcatatttcccttatgtta 369  Q
    |||||||||||||||||||||    
T  3403220 gatcatatttcccttatgtta 3403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 248 - 362
Target Start/End: Complemental strand, 5087233 - 5087118
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| ||||||| |||| ||||||| ||||||||||| |||    
T  5087233 tgacaattttggcccctttcgtcccaaaattgatgagaagacgccacgtgtcccaaaatagggatcataatcgcaactttttgaaaagataaggggtcaa 5087134  T
Q  347 aagatcatatttccct 362  Q
    || |||||||||||||    
T  5087133 aaaatcatatttccct 5087118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 184 - 375
Target Start/End: Complemental strand, 26385562 - 26385370
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctga 283  Q
    ||||||||||||   | |||||||||||||||| ||||||||||||| || ||||||       ||||||||||||||||||| |||  ||||||||| |    
T  26385562 taaactgcactttctgccccctaagtttcaaaatgttgcgattttggccccctatttataaaaatgacaattttggccccttttgtcctaaaattgctaa 26385463  T
Q  284 gaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtc 375  Q
     |||||||||| |||||||||| | ||| |||||| |||| |||||||||||||||| || ||||| |||||||||| ||||||||| |||||    
T  26385462 taagacgccacatgtcccaaaacatgggccataatcgcaactttttgagaagataagaggtcaaaatatcatatttctcttatgttaggggtc 26385370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 183 - 381
Target Start/End: Complemental strand, 25003007 - 25002810
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    |||||||| |||| ||| ||||||||||| |||| ||||||||||||||||  ||||        |||||||||||||||||||  || |||| |||||     
T  25003007 ctaaactgtacttttcgccccctaagttttaaaatgttgcgattttggtcccttatt--aaaaaatgacaattttggccccttttatcccaaagttgcta 25002910  T
Q  283 agaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaaga 381  Q
    ||| ||||||| ||||||||||| | |||||||||| |||| ||| ||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||    
T  25002909 agaggacgccatgtgtcccaaaacacgggtcataatcgcaaatttatgagaagataaggggtcaaaagatcatatttcctttatgttaggggtcaaaaga 25002810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 170 - 369
Target Start/End: Complemental strand, 20636933 - 20636735
Alignment:
Q  170 attaaaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgt 269  Q
    ||||||||  || ||||| ||||||| ||| |||||| ||||||||| ||||||||||||  || ||||||       || ||||||||||||||| | |    
T  20636933 attaaaataaaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatttaaaaaaatggcaattttggcccctt-cat 20636835  T
Q  270 ctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtt 368  Q
    | ||||||||||||||| ||||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| ||||| | |||||||||||||||||    
T  20636834 cccaaaattgctgagaaaacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtt 20636736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 252 - 381
Target Start/End: Complemental strand, 4193783 - 4193653
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    |||||||||||||||| |  |||||||||||| |||||| |||||||| |||||| |||| ||||||||||| ||||||| ||||||||||| |||||||    
T  4193783 aattttggcccctttccttccaaaattgctgaaaagacgtcacgtgtctcaaaaaaggggccataattgcaactttttgaaaagataaggggtcaaaaga 4193684  T
Q  351 tcatatttcccttatgttatgggtcgaaaga 381  Q
    ||||||||| ||||||||| ||||| |||||    
T  4193683 tcatatttctcttatgttaagggtcaaaaga 4193653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 183 - 381
Target Start/End: Original strand, 11843180 - 11843378
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||  | |||||        || ||||||||||||||||| || |||||||||||    
T  11843180 ctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaattttggcccctttcatcccaaaattgctg 11843279  T
Q  283 agaagacgccacgt-gtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaaga 381  Q
    ||||||||||||||  ||  ||||||||| ||||||||||| ||||||  | ||||||||| ||||| | ||||||| |||||||||| ||||| |||||    
T  11843280 agaagacgccacgtattcaaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaa-agcatattttccttatgttaggggtcaaaaga 11843378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 176 - 381
Target Start/End: Original strand, 13577782 - 13577986
Alignment:
Q  176 atttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaa 275  Q
    |||| |||||||||||||||||||  | ||| ||||||||| ||||||||||||| || |||||        || ||||||||||||||||| || ||||    
T  13577782 attttgactaaactgcacttctcgctctctatgtttcaaaatgttgcgattttggccccctatt-aaaaaaatggcaattttggcccctttcatcccaaa 13577880  T
Q  276 attgctgagaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggt 374  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||| ||| ||||||   |||||| ||| ||||| | |||||||||||||||||| ||||    
T  13577881 attgctgagaagacgccacgtgttccaaaaaaggggccataatttcaactttttgtatagataaagggtcaaaa-agcatatttcccttatgttaggggt 13577979  T
Q  375 cgaaaga 381  Q
    | |||||    
T  13577980 caaaaga 13577986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 177 - 381
Target Start/End: Original strand, 48175958 - 48176163
Alignment:
Q  177 tttagactaaactgcacttct-cgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaa 275  Q
    ||||| ||||||||||||| | || |||||| |||||| || ||||||||||||| || |||||        |  ||||||||||||||||| || ||||    
T  48175958 tttaggctaaactgcactttttcgccccctatgtttcataatgttgcgattttggccccctattagaaaaaatagcaattttggcccctttcatcccaaa 48176057  T
Q  276 attgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggt 374  Q
    |||||| |||||| ||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| ||||| | |||||||||||||||||| ||||    
T  48176058 attgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgttaggggt 48176156  T
Q  375 cgaaaga 381  Q
    | |||||    
T  48176157 caaaaga 48176163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 202 - 362
Target Start/End: Complemental strand, 6650793 - 6650632
Alignment:
Q  202 ccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc 301  Q
    |||||||||| |||| ||||||||| ||||||  ||||        |||||||||| |||||||||||| |||||||| |||||||||||||| |||| |    
T  6650793 ccctaagttttaaaatgttgcgattgtggtcccttattaaaaaatatgacaattttagcccctttcgtcccaaaattgatgagaagacgccacatgtctc 6650694  T
Q  302 aaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    |||| ||||| |||||| |||| ||||||||||||||||||| ||||||| |||||||||||    
T  6650693 aaaacaggggccataatcgcaactttttgagaagataaggggtcaaaagagcatatttccct 6650632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 251 - 375
Target Start/End: Complemental strand, 26126488 - 26126363
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||| ||||||||| ||  ||||||||| ||||||| | | |||||||||||| ||||| |||||| |||| ||||||||||||||||||| ||||||    
T  26126488 caatttcggccccttttgttccaaaattgcagagaagatgtctcgtgtcccaaaacaggggccataatcgcaactttttgagaagataaggggtcaaaag 26126389  T
Q  350 atcatatttcccttatgttatgggtc 375  Q
    |||||||||||||||||||| |||||    
T  26126388 atcatatttcccttatgttaggggtc 26126363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 170 - 369
Target Start/End: Original strand, 27869185 - 27869383
Alignment:
Q  170 attaaaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgt 269  Q
    |||| |||| || ||||| ||||||| ||| |||||| ||||||||| ||||||||||||  || |||||        |||||||||||||| | ||| |    
T  27869185 attataattaaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctatt-aaaaaaatgacaattttggcctccttcat 27869283  T
Q  270 ctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtt 368  Q
    | |||||||||||||||||||||| ||||||| ||||||||| |||||| |||| ||||||  ||||||||||| ||||| | |||||||||||||||||    
T  27869284 cccaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtt 27869382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 260 - 385
Target Start/End: Original strand, 39440199 - 39440326
Alignment:
Q  260 cccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatattt 358  Q
    |||||||||| | ||||||| |||||||||||||| ||||| |||| |||||||||||| |||| ||||||| ||||||||||  |||||||||||||||    
T  39440199 cccctttcgttttaaaattgttgagaagacgccacatgtcctaaaacaggggtcataatcgcaactttttgaaaagataagggatcaaaagatcatattt 39440298  T
Q  359 cccttatgttatg-ggtcgaaagatcat 385  Q
    ||||||||||| | |||| |||||||||    
T  39440299 cccttatgttaggaggtcaaaagatcat 39440326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 41452319 - 41452437
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  |||||||||||||||||| |||||||||| |||||||||||||||| |||| ||||||  ||||||||||| |||||     
T  41452319 caattttggcccctttcatccaaaaattgctgagaagacgacacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 41452417  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  41452418 agcatatttcccttatgtta 41452437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 248 - 369
Target Start/End: Original strand, 36746570 - 36746691
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    |||||||||||||||||||| || |||||||| ||||||||||||||||||||| |||||||||||||||| |||| ||||||  |||||||||||  ||    
T  36746570 tgacaattttggcccctttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggttaa 36746669  T
Q  347 aagatcatatttcccttatgtta 369  Q
    |||  |||||||| |||||||||    
T  36746670 aag-gcatatttctcttatgtta 36746691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 10023855 - 10023952
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||| | |||| ||||||  ||||||||||| |||||    
T  10023855 caattttggccccttttgtctcaaaattgctgagaagacaccacgtgtcccaaaaaggggccatattcgcaactttttgtaaagataaggggtcaaaa 10023952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 251 - 366
Target Start/End: Complemental strand, 7365457 - 7365341
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||| ||||||| ||||||||||||||||| | |||||||||||||| || ||  ||||| |||| ||||||||||||||||| | |||||     
T  7365457 caattttggcccttttcgtcccaaaattgctgagaagatgtcacgtgtcccaaaacagaggcaataatcgcaactttttgagaagataaggagtcaaaat 7365358  T
Q  350 atcatatttcccttatg 366  Q
    |||||||||||||||||    
T  7365357 atcatatttcccttatg 7365341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 35337592 - 35337710
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  ||||||  ||||||||||||||||||||| |||||||||||||||| |||| ||||||  ||||||||||| |||||     
T  35337592 caattttggcccctttcatcaaaaaattattgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 35337690  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  35337691 agcatatttcccttatgtta 35337710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 31494212 - 31494026
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    |||||||||| || |||  | ||| ||||||||| ||||||||||||| || |||||        || ||||||||||||||||| ||  ||||||||||    
T  31494212 ctaaactgcatttttcgcactctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccctttcatcctaaaattgctg 31494113  T
Q  283 agaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||| ||| ||||||||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||| ||||||||||    
T  31494112 agaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatattttccttatgtta 31494026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 21224422 - 21224540
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtc-ccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||| | ||||| ||| |||||| |||| ||||||  ||||||||||| |||||     
T  21224422 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtctcaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaa- 21224520  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  21224521 agcatatttcccttatgtta 21224540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 251 - 365
Target Start/End: Original strand, 33237484 - 33237598
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||| |||| || |||||||||||||||||||||||||||||||||| || |||||||||  ||| ||||| ||||| ||||||| |||||     
T  33237484 caattttggccc-tttcatcccaaaattgctgagaagacgccacgtgtcccaaaacagtggtcataatcacaacttttttagaaggtaaggggtcaaaat 33237582  T
Q  350 atcatatttcccttat 365  Q
    |||||||| |||||||    
T  33237583 atcatattacccttat 33237598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 251 - 368
Target Start/End: Complemental strand, 19493552 - 19493435
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| || |||||| |||||||||||||||||||||| |||| ||||| ||||||  | | ||||||||||||||| ||| |||||     
T  19493552 caattttggcccctttcatcccaaaatggctgagaagacgccacgtgtcctaaaacaggggccataatcac-actttttgagaagataaagggtcaaaaa 19493454  T
Q  350 atcatatttcccttatgtt 368  Q
    ||||||||| |||||||||    
T  19493453 atcatattttccttatgtt 19493435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 184 - 369
Target Start/End: Original strand, 3562436 - 3562621
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctga 283  Q
    |||| ||||||| |||  ||||| ||||||||| ||||||||||||| || |||||         | ||||||||||||| ||| ||  ||| |||||||    
T  3562436 taaagtgcacttttcgctccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaaaggcaattttggcccccttcatcctaaacttgctga 3562535  T
Q  284 gaagacgccacgtgtcc-caaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||||  ||||||||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  3562536 gaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 3562621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 17306002 - 17305880
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa--ggggtcataattgcaagtttttgagaagataaggggcca 345  Q
    |||||||||||| ||||||| || |||||||| |||||||||||||| |||||||||||  |||||||||||  ||| ||||||  || |||||||| ||    
T  17306002 tgacaattttgggccctttcatcccaaaattgatgagaagacgccacatgtcccaaaaaagggggtcataatcacaactttttgtaaaaataaggggtca 17305903  T
Q  346 aaagatcatatttcccttatgtta 369  Q
    ||| | ||||||||||||||||||    
T  17305902 aaa-agcatatttcccttatgtta 17305880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 177 - 369
Target Start/End: Original strand, 24597513 - 24597703
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaa 276  Q
    ||||| ||||| ||||||| ||| | |||| ||||||||| |||| |||||||| || |||||        || ||||||||||||||| | || |||||    
T  24597513 tttaggctaaagtgcacttttcgcctcctatgtttcaaaatgttgtgattttggccccctatt-aaaaaaatggcaattttggcccctt-catcccaaaa 24597610  T
Q  277 ttgctgagaagacgccacgtgtcccaaa-aaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||||||| |||| |||||| |||||| |||| ||||||  |||| |||||| ||||| | ||||||||||||||||||    
T  24597611 ttgctgagaagacgccacgtgtctcaaacaaggggccataatcgcaactttttgtaaagagaaggggtcaaaa-aacatatttcccttatgtta 24597703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 205 - 373
Target Start/End: Original strand, 4571377 - 4571536
Alignment:
Q  205 taagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaa 304  Q
    ||||||| |||| |||||||||||| |||||||||        ||||||||||| |||||||| || || ||||| |||||||||         || |||    
T  4571377 taagttttaaaatgttgcgattttgctcctctattaaaaaaaatgacaattttgtcccctttcatcccataattgttgagaagac---------ccaaaa 4571467  T
Q  305 aaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatggg 373  Q
     ||||| || ||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4571468 caggggccacaatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggg 4571536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 302 - 381
Target Start/End: Complemental strand, 5111621 - 5111542
Alignment:
Q  302 aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaaga 381  Q
    ||||||||| |||||| |||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||    
T  5111621 aaaaaggggccataatcgcaactttttgagaagataaggggtcaaaatatcatatttcccttatgttaggggtcaaaaga 5111542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 14624832 - 14624706
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    |||| ||| ||| ||| ||||||||||||||| | ||||||||||||| |||||||| ||||||||||| ||||||  ||||||| ||| ||||| |  |    
T  14624832 tttgacccattttgtcccaaaattgctgagaacatgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaagggtcaaaa-agta 14624734  T
Q  354 tatttcccttatgttatgggtcgaaaga 381  Q
    |||||||||||||||||||||| |||||    
T  14624733 tatttcccttatgttatgggtcaaaaga 14624706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 19195283 - 19195401
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  ||||||| |||||||||||||| |||||| ||||||||| ||||||  ||| ||||||  ||||||||||| |||||     
T  19195283 caattttggcccctttcatccaaaaattgttgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaa- 19195381  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  19195382 aacatatttcccttatgtta 19195401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 24464813 - 24464691
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    ||||||||||| |||| ||| |   |||||||||||||||||||||| |||| ||||| |  |  |||||| ||||  |||||||||||||||||| |||    
T  24464813 tgacaattttgtcccccttcattctaaaattgctgagaagacgccacatgtcacaaaacaatgaccataatcgcaacattttgagaagataaggggtcaa 24464714  T
Q  347 aagatcatatttcccttatgtta 369  Q
    |||||||||||||||||||||||    
T  24464713 aagatcatatttcccttatgtta 24464691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 42271569 - 42271448
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||| ||| ||||| ||| |||||| |||| ||||||  || |||||||| |||    
T  42271569 tgacaattttggcccccttcatccgaaaattgctgagaagacgccacgtgttccaaaaaaagggccataatcgcaactttttgtaaacataaggggtcaa 42271470  T
Q  347 aagatcatatttcccttatgtta 369  Q
    || | ||||||||||||||||||    
T  42271469 aa-agcatatttcccttatgtta 42271448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 10655563 - 10655471
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataagggg 342  Q
    ||||||||||||||||| || |||||||||| |||||| ||||||||||||| |||| |||||||||| |||| ||||||  |||||||||||    
T  10655563 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaagataagggg 10655471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 8527096 - 8526912
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||| ||||||  |||||||| ||||||||||||| || |||||        || ||||||||||||  ||| || |||||||||||    
T  8527096 ctaaagtgcacttttcgccccctatatttcaaaatgttgcgattttggccccctatt-aaaaaaatggcaattttggccctcttcatcccaaaattgctg 8526998  T
Q  283 agaagacgccacgtgtc-ccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||| |||||||||| | ||||||||| ||||||||||| ||||||  || ||| ||| | |||||  ||||||||||||||||||    
T  8526997 agaagatgccacgtgtctcaaaaaaggggccataattgcaactttttgtaaaaataggggtcaaaaag--catatttcccttatgtta 8526912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 272 - 369
Target Start/End: Complemental strand, 23439807 - 23439709
Alignment:
Q  272 caaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||| ||| ||||||| ||||||||||||||||| |||||||||||| |||| ||||| | ||||||||||  ||||||| ||||||||||||| ||||    
T  23439807 caaagttgttgagaagccgccacgtgtcccaaaacaggggtcataatcgcaacttttttaaaagataagggatcaaaagagcatatttcccttaagtta 23439709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 253 - 369
Target Start/End: Original strand, 44077942 - 44078059
Alignment:
Q  253 attttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaagg-ggtcataattgcaa-gtttttgagaagataaggggccaaaaga 350  Q
    ||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||||  |||||||| ||||  ||||||  ||||||||||| ||||| |    
T  44077942 attttggtccctttcgtcccaaaattgctaagaagacgccatgtgtcccaaaaaggatgtcataatcgcaacttttttgtaaagataaggggtcaaaa-a 44078040  T
Q  351 tcatatttcccttatgtta 369  Q
     |||||||| |||||||||    
T  44078041 acatatttctcttatgtta 44078059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 5348265 - 5348153
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaa-gtttttgagaagataaggggcca 345  Q
    ||||||||||| || |||||||| ||||||||||||||||||| ||| | |||||||| ||| | |||||| ||||  ||||| ||||||||||||| ||    
T  5348265 tgacaattttgacctctttcgtcccaaaattgctgagaagacgtcacatatcccaaaacaggagccataatcgcaactttttttagaagataaggggtca 5348166  T
Q  346 aaagatcatattt 358  Q
    ||||| |||||||    
T  5348165 aaagagcatattt 5348153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 253 - 381
Target Start/End: Original strand, 21225621 - 21225748
Alignment:
Q  253 attttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatc 352  Q
    ||||||| ||||||||||  ||||||| |||||||||| ||||||| |||||||  ||||||||| |||| ||||||  ||||  ||||| ||||  | |    
T  21225621 attttggtccctttcgtcctaaaattgttgagaagacgtcacgtgttccaaaaaatggtcataatcgcaactttttgtaaagacgaggggtcaaat-agc 21225719  T
Q  353 atatttcccttatgttatgggtcgaaaga 381  Q
    ||||||||||||||||| ||||| |||||    
T  21225720 atatttcccttatgttaggggtcaaaaga 21225748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 24448047 - 24448232
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| |||| |||||| |||| |||||||||||| ||| |||||        || | ||||||| |||||||||  |||||||||||    
T  24448047 ctaaactgcacttttcgccccccaagttttaaaatgttgcgattttgatcccctatt--aaaaaatg-cgattttggtccctttcgttccaaaattgctg 24448143  T
Q  283 agaagacgccacgtgtccc--aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||| | ||||||||  ||||||||| ||||||  ||  ||||||  ||||||||||| || || | ||||||||||||||||||    
T  24448144 agaagacgtcgcgtgtcccttaaaaaggggccataatcacatttttttgtaaagataaggggtcataaaaacatatttcccttatgtta 24448232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 2331243 - 2331129
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    ||||||||||||| ||  |||||||||||||||||||||| ||||||| ||||  || |||||| |||| ||||||  ||||||||| | ||||| | ||    
T  2331243 tttggcccctttcatccaaaaattgctgagaagacgccacttgtcccaaaaaataggccataatcgcaactttttgtaaagataaggagtcaaaa-agca 2331145  T
Q  354 tatttcccttatgtta 369  Q
    ||||||||||||||||    
T  2331144 tatttcccttatgtta 2331129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 9157096 - 9157154
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa 306  Q
    |||||||||||| | |||||||||||||||||||||||||||| || ||||||||||||    
T  9157096 tgacaattttggtctctttcgtctcaaaattgctgagaagacgtcatgtgtcccaaaaa 9157154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 369
Target Start/End: Complemental strand, 43251501 - 43251380
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgcc-acgtgtcccaaaaag-gggtcataattgcaagtttttgagaagataaggggccaaa 347  Q
    |||||||||||  ||||| ||  |||| || |||||||||||| |||||||| |||||  ||||| |||| | || ||||||||||||||| | | ||||    
T  43251501 acaattttggcttctttcatcctaaaaatgttgagaagacgcccacgtgtccaaaaaaaagggtcttaatcgtaactttttgagaagataaagagtcaaa 43251402  T
Q  348 agatcatatttcccttatgtta 369  Q
    ||||||||||||||||||||||    
T  43251401 agatcatatttcccttatgtta 43251380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 313 - 381
Target Start/End: Original strand, 9157183 - 9157251
Alignment:
Q  313 ataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaaga 381  Q
    ||||| |||| |||||||||||||||| || |||||||||||||||| ||||||||| ||||| |||||    
T  9157183 ataatcgcaactttttgagaagataagtggtcaaaagatcatatttcacttatgttaggggtcaaaaga 9157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 250 - 365
Target Start/End: Complemental strand, 3148158 - 3148043
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||| |||| |   |||||||| |||||||||||| ||||||||||||| |||  |||||||||| ||||||  ||| ||| ||| |||| |    
T  3148158 acaattttggcctcttttgctccaaaattgttgagaagacgcctcgtgtcccaaaaaagggctataattgcaattttttgtaaagttaaagggtcaaagg 3148059  T
Q  350 atcatatttcccttat 365  Q
    | ||||||||| ||||    
T  3148058 agcatatttccattat 3148043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 18754336 - 18754454
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||| |||||||| || |||||||| | ||||||  |||||||||||| |||| | |||||||| ||||  |||||  ||||||||||| |||||     
T  18754336 caattttgacccctttcatcccaaaattgatcagaagataccacgtgtcccagaaaatgtgtcataatcgcaacattttgtaaagataaggggtcaaaa- 18754434  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  18754435 aacatatttcccttatgtta 18754454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 19919673 - 19919791
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||| || ||| || ||||||||||||||| |||| ||||||||| |||||||||  |||||  ||| ||||||  ||||||||||| |||||     
T  19919673 caattttggcacccttcatcccaaaattgctgagaaaacgctacgtgtcccaaaaaaggggctataatcacaactttttgtaaagataaggggtcaaaa- 19919771  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||| ||||||||||    
T  19919772 aacatattttccttatgtta 19919791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 369
Target Start/End: Complemental strand, 23473203 - 23473105
Alignment:
Q  272 caaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||| ||| ||||||| ||||||||||||||||| || |||||||||  ||| ||||||| ||||||||   |||||||| ||||||||||||| ||||    
T  23473203 caaagttgttgagaagccgccacgtgtcccaaaacagaggtcataatcacaactttttgaaaagataagataccaaaagagcatatttcccttaagtta 23473105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 6798014 - 6798071
Alignment:
Q  312 cataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||| |||| ||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  6798014 cataatcgcaacttttttagaagataaggggtcaaaagatcatattttccttatgtta 6798071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 276
Target Start/End: Complemental strand, 5111712 - 5111619
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaa 276  Q
    ||||||| ||||| | ||||||||||||| |||||||||||||||| | ||||||||        | ||||||||||||||||||||| |||||    
T  5111712 ctaaactacactttttgacccctaagttttaaaaagttgcgatttttgccctctattaaaaaaaattacaattttggcccctttcgtcacaaaa 5111619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 18754567 - 18754512
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||||| ||||| ||| |||||||||||||||| |||||||||||||||| |||||    
T  18754567 taaactccacttttcgccccctaagtttcaaaatgttgcgattttggtcccctatt 18754512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 272 - 369
Target Start/End: Original strand, 23461112 - 23461210
Alignment:
Q  272 caaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||| ||| ||||||| ||||||||||||||||| |||||||||||| |||| ||||||| | ||||| ||  |||||||  ||||||| |||| ||||    
T  23461112 caaagttgttgagaagccgccacgtgtcccaaaacaggggtcataatcgcaactttttgaaatgataaaggatcaaaagagaatatttctcttaagtta 23461210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 278 - 362
Target Start/End: Original strand, 38722900 - 38722986
Alignment:
Q  278 tgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagttttt-gagaagataaggggccaaaagatcatatttccct 362  Q
    |||||||||| ||||||||||||| ||||||||| || ||| |||| ||||| |  |||||||||| |||||||| |||||||||||    
T  38722900 tgctgagaagccgccacgtgtcccaaaaaaggggccaaaatcgcaactttttggtaaagataagggtccaaaagagcatatttccct 38722986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 285 - 362
Target Start/End: Complemental strand, 47113315 - 47113237
Alignment:
Q  285 aagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    ||||||||||||||||||||| ||||| || ||| |||| |||||   ||||||| ||||||||||||| |||||||||    
T  47113315 aagacgccacgtgtcccaaaacaggggccaaaatcgcaactttttataaagataaagggccaaaagatcttatttccct 47113237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Original strand, 15093818 - 15093867
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtg 297  Q
    |||||||||||| |||||||||  ||||||||||||||||||| ||||||    
T  15093818 tgacaattttggtccctttcgttccaaaattgctgagaagacgtcacgtg 15093867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 9154398 - 9154478
Alignment:
Q  281 tgagaagacgccacgtgtccca-aaaaggggtcataattgcaa-gtttttgagaagataaggggccaaaagatcatatttc 359  Q
    ||||||| |||||||||||||| |||||||| |||||| ||||  ||||||  |||||||||| |||||||| ||||||||    
T  9154398 tgagaagccgccacgtgtcccataaaaggggccataatcgcaacttttttgcaaagataagggaccaaaagagcatatttc 9154478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 281 - 362
Target Start/End: Original strand, 14196923 - 14197006
Alignment:
Q  281 tgagaagacgccacgtgtcccaaaaaggggtcataattgcaa--gtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    ||||||| |||||| ||| ||||||||||| |||||||||||   ||||||  ||||||| ||| ||||||| |||||||||||    
T  14196923 tgagaagccgccacatgttccaaaaaggggccataattgcaactttttttgtaaagataaagggtcaaaagagcatatttccct 14197006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 820 - 871
Target Start/End: Original strand, 4411507 - 4411558
Alignment:
Q  820 tcatgttctttttgggttacaaatgtgtgttatgtatttaggctttgaaatt 871  Q
    ||||||||||||||||||||||||||||||| |  |||||| |||| |||||    
T  4411507 tcatgttctttttgggttacaaatgtgtgttttagatttagactttaaaatt 4411558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 23658777 - 23658831
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||||||||||| |||| |||||||||| |||| ||||||||||||| ||||||||    
T  23658777 taaactgcacttttcgatccctaagttttaaaatgttgcgattttgg-cctctatt 23658831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 48176275 - 48176208
Alignment:
Q  172 taaaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||||| ||| |||||||  |||| ||| |||||||||||||||| ||||||||||||| || |||||    
T  48176275 taaaatataggctaaactctacttttcgccccctaagtttcaaaatgttgcgattttggccccctatt 48176208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 29051789 - 29051728
Alignment:
Q  313 ataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtc 375  Q
    ||||| |||| ||||||||||||||||||| ||||| ||||| |||| ||||| |||||||||    
T  29051789 ataatcgcaactttttgagaagataaggggtcaaaa-atcatttttctcttatattatgggtc 29051728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 26385260 - 26385321
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||| ||||||||||||| ||| ||||||| ||||||||  ||||| ||||||||| |||||    
T  26385260 ttaggctaaactgcacttttcgtcccctaaatttcaaaatattgcgtttttggtcccctatt 26385321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 820 - 913
Target Start/End: Complemental strand, 27964740 - 27964649
Alignment:
Q  820 tcatgttctttttgggttacaaatgtgtgttatgtatttaggctttgaaattgtctccaagtcttgttaaattcttcaatgaatccttttattt 913  Q
    |||||||||||||||||| ||||||| |||| |  | ||||||||| ||||||||||| | || | ||| |||||| ||||||| |||||||||    
T  27964740 tcatgttctttttgggtttcaaatgt-tgttttagaattaggctttaaaattgtctcc-actccttttacattcttgaatgaattcttttattt 27964649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 282; Significance: 1e-157; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 676 - 1054
Target Start/End: Complemental strand, 2369256 - 2368872
Alignment:
Q  676 atgagttggagaaatgcaaagatatgttatttcccctgttcaagttgttgtttggattcatcagcttttgggtaatttttccatcttcaattatttctta 775  Q
    |||| ||||||||||||||||| |||||| || ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  2369256 atgaattggagaaatgcaaagacatgttaatttccctgttgaagatgttgtttggattcatcaacttttgggtaatttttccatctttaattatttctta 2369157  T
Q  776 ttttacatgtttgatcgaatgcctcatggatttacttttacaaatcatgttctttttgggttacaaatgtgtgttatgtatttaggctttgaaattgtct 875  Q
    |||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||    
T  2369156 ttttacatgtttcattgaatgcctcatggatttacttttacaactcatgttctttttgggttacaaatgtgcgttttatatttaggatttgaaattgtct 2369057  T
Q  876 ccaagtcttgttaaattcttcaatgaatccttttatttaagttgtgaattcaattctctaacaccattatgcaagggattgagaagagataaaacatggc 975  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2369056 ccaagtcttgttaaattcttcaatgaatccttttatttaagttgtgaattcaattctctaacaccattatgcaagggattgagaagagataaaacagggc 2368957  T
Q  976 tcttgattttgttttatttatctggatttt------ttgtaggatatactccgttctgaaaggtagtactaacaaactactctct 1054  Q
    ||||||||||||||||||||  ||| ||||      |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2368956 tcttgattttgttttatttagttggtttttttgttgttgtaggatatactccgttccgaaaggtagtactaacaaactactctct 2368872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 18 - 381
Target Start/End: Complemental strand, 2373612 - 2373248
Alignment:
Q  18 caattttctataaatattatttttggcaatgaattaggtagttggtaggcaagaattatgtgatttcctttccttctggtggtgtttagttgaaggtaca 117  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||| |||||| ||||||||||||||| |||||||||||||| ||||    
T  2373612 caattttctataaatattgtttttggcactgaattaggtagttggtaggttagaattttgtgatgtcctttccttctggtagtgtttagttgaagttaca 2373513  T
Q  118 actatatttgtcctaattttgcattaatctctttgaattttgcaattgaatcattaaaatttagactaaactgcacttctcgacccctaagtttcaaaaa 217  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  2373512 actatatttgtcctaattttgcactaatctctttgaattttacaattgaatcattaaaatttaggctaaactgcacttttcaacccctaagtttcaaaaa 2373413  T
Q  218 gttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgt-cccaaaaaggggtcataa 316  Q
    ||||||||||||| |  ||||||        |||||||||||||||| ||||| |||||||||| |||||||||||||||| ||||||||||||||||||    
T  2373412 gttgcgattttggcctcctatttaaaaaaaggacaattttggcccctgtcgtcccaaaattgctaagaagacgccacgtgtccccaaaaaggggtcataa 2373313  T
Q  317 ttgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaaga 381  Q
    | |||| |||||||||| |||||||| || || |||||||||||||||||||||||||| |||||    
T  2373312 tcgcaaatttttgagaaaataaggggtcataatatcatatttcccttatgttatgggtcaaaaga 2373248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 5e-62
Query Start/End: Original strand, 183 - 373
Target Start/End: Original strand, 38476472 - 38476662
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||||| | || ||||||       ||||||||||||||| ||||||| |||||||||||    
T  38476472 ctaaaatgcacttttcgacccctaagttacaaaaagttgcgattttagccccctatttaataaaatgacaattttggcccatttcgtcccaaaattgctg 38476571  T
Q  283 agaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatggg 373  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38476572 agaagacgccacgtgtcccaaaaaagggtcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggg 38476662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 382 - 551
Target Start/End: Complemental strand, 2372857 - 2372684
Alignment:
Q  382 tcattaaggtaagatttcagtgtgcatatcttgccattattatctatgattgaatcatattattaatgttgtttctctgtattagactcgttgtagggat 481  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||| || |||||| |||||||||| ||||||||||    
T  2372857 tcattaaggtaagattttagtgtgcatatcttgccaatattatctattattgaatcatattattaatgatgattctctatattagactcattgtagggat 2372758  T
Q  482 tcaaagtttaattttcaaaaaagggggatcgattc----gtgaattaaattagaagtaaattaccaatattgaa 551  Q
    |||||||||||||||||||||| |||||| |||||    |||||||||||||||||| |||| |||||||||||    
T  2372757 tcaaagtttaattttcaaaaaaaggggattgattcataggtgaattaaattagaagtgaatttccaatattgaa 2372684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 184 - 369
Target Start/End: Original strand, 40428642 - 40428827
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctga 283  Q
    |||| ||||||| ||| |||||| ||||||||| |||||||||||||||| |||||        || ||||||||||||| |||||| ||||||||||||    
T  40428642 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaattttggcccccttcgtcccaaaattgctga 40428741  T
Q  284 gaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||||| |||||||||||||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  40428742 gaagacgccacgtgtcccaaaaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 40428827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 18695304 - 18695119
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||| |||||| |||||||||  |||||||||||| || |||||        || ||||||||||||||||| ||||||||||||||    
T  18695304 ctaaagtgcacttttcgccccctatgtttcaaaatattgcgattttggccccctatt-aaaaaaatggcaattttggcccctttcatctcaaaattgctg 18695206  T
Q  283 agaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||||||| |||||||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  18695205 agaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 18695119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 25556879 - 25557063
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| |||||| ||||||||| ||||| ||||||| || |||||        || ||||||||||||||||| || |||||||||||    
T  25556879 ctaaactgcacttatcg-cccctatgtttcaaaatgttgcaattttggccccctatt-aaaaaattggcaattttggcccctttcatcccaaaattgctg 25556976  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  25556977 agaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 25557063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 16900999 - 16901185
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| | |||| ||||||||| ||||||||||||  || |||||        || |||||||||||| |||| || |||||||||||    
T  16900999 ctaaactgcacttttcgcctcctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccatttcatcccaaaattgctg 16901098  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| ||||||||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  16901099 agaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 16901185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 250 - 381
Target Start/End: Original strand, 17825566 - 17825698
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    |||||||||||||||||| ||||||||||  | ||||||||||||||||||| ||||||||| |||||| |||| ||||||| ||||||| ||| |||||    
T  17825566 acaattttggcccctttcatctcaaaattttttagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgacaagataaagggtcaaaa 17825665  T
Q  349 gatcatatttcccttatgttatgggtcgaaaga 381  Q
    || |||||||| ||||||||| ||||| |||||    
T  17825666 gaacatatttctcttatgttaggggtcaaaaga 17825698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 250 - 369
Target Start/End: Original strand, 37961317 - 37961437
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    ||||| |||| ||||||| || |||||||||||||||||| |||||||||||  |||||||| ||||||||||| ||||||||||| ||||||| |||||    
T  37961317 acaatcttggtccctttcatcccaaaattgctgagaagacaccacgtgtcccttaaaaggggccataattgcaactttttgagaagttaaggggtcaaaa 37961416  T
Q  349 gatcatatttcccttatgtta 369  Q
    |||||| ||||||||||||||    
T  37961417 gatcatttttcccttatgtta 37961437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 250 - 373
Target Start/End: Original strand, 41663592 - 41663716
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    ||||||||| ||| ||||||| |||||||||| |||||| ||||||||||||||||| |||| |||||| |||| |||||||||| |||| | | |||||    
T  41663592 acaattttgacccatttcgtcccaaaattgctaagaagatgccacgtgtcccaaaaaaggggccataatcgcaattttttgagaaaataaagagtcaaaa 41663691  T
Q  349 gatcatatttcccttatgttatggg 373  Q
     ||||||||||||||||||||||||    
T  41663692 aatcatatttcccttatgttatggg 41663716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 31055384 - 31055502
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| || |||||||||| |||||| ||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| |||||     
T  31055384 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaa- 31055482  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  31055483 aacatatttcccttatgtta 31055502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 245896 - 245710
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||| | |||| |||| |||| ||||||||||| |||| |||||        || ||||||||||||| ||| ||  ||||||||||    
T  245896 ctaaagtgcacttttcgccacctatgttttaaaatgttgcgattttagtcccctattaaaaaaaatggcaattttggcccccttcatccgaaaattgctg 245797  T
Q  283 agaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||||||| |||||||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  245796 agaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 245710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 34125297 - 34125175
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    |||||||||||||||| ||| || ||||||| ||||||| ||||||||||| |||||| | |||||||||| |||| |||||||||||||||| || |||    
T  34125297 tgacaattttggcccccttcatcccaaaattactgagaatacgccacgtgttccaaaacatgggtcataatcgcaactttttgagaagataagaggtcaa 34125198  T
Q  347 aagatcatatttcccttatgtta 369  Q
    | |||||||||| ||||||||||    
T  34125197 atgatcatattttccttatgtta 34125175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 184 - 369
Target Start/End: Original strand, 16307480 - 16307664
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctga 283  Q
    |||||||||||| ||  |||||| |||| |||| |||| ||||||||||| |||||        || ||||||||||||||||| ||| |||||||||||    
T  16307480 taaactgcacttttcaccccctatgttttaaaatgttgtgattttggtcccctatt-aaaaaaatggcaattttggcccctttcatcttaaaattgctga 16307578  T
Q  284 gaagacgccacgtgtcc-caaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||| |||||  ||||||||||||||||||||| ||||||  ||||||||| | ||||| | ||||||| ||||||||||    
T  16307579 gaagacgccacatgtccaaaaaaaggggtcataattgcaactttttgtaaagataaggagtcaaaa-aacatattttccttatgtta 16307664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 184 - 369
Target Start/End: Original strand, 23039954 - 23040137
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnn-tgacaattttggcccctttcgtctcaaaattgctg 282  Q
    |||||||||||| ||||||  ||||||| |||| ||| ||||||||||||||||||         | ||||||||||| | || |||| |||||||||||    
T  23039954 taaactgcacttttcgacctataagttttaaaatgttacgattttggtcctctattaaaaaaaaattacaattttggctcatt-cgtcccaaaattgctg 23040052  T
Q  283 agaagacgccacgtgtcccaaaaag-gggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||   |||||| | |||||||  |||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  23040053 agaag---ccacgttttccaaaaaaagggtcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta 23040137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 26639107 - 26639225
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||| ||| || |||||||| ||||||||||||||||||||| |||||| || ||||||||||| ||||||  ||||||||||| |||||     
T  26639107 caattttggcccccttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataaggggtcaaaa- 26639205  T
Q  350 atcatatttcccttatgtta 369  Q
      ||||||||||||||||||    
T  26639206 cgcatatttcccttatgtta 26639225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 177 - 369
Target Start/End: Complemental strand, 38408935 - 38408744
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaa 276  Q
    ||||| |||||||||| || ||| || ||| |||| | || |||||||||||||||| |||||        |  |||||||||||| |||| || |||||    
T  38408935 tttaggctaaactgcatttttcgtcctctatgttttataatgttgcgattttggtcccctattaaaaaaattagcaattttggccc-tttcatcccaaaa 38408837  T
Q  277 ttgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||| |||||| ||||||||||||| |||| |||||||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  38408836 ttgctcagaagatgccacgtgtcccagaaaatgggtcataatagcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 38408744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 251 - 381
Target Start/End: Complemental strand, 10379515 - 10379385
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||| ||||||| || ||||||| || |||||| ||||| |||| || ||||||||||||||| |||| ||||||  ||||||||||| |||||     
T  10379515 caattttggtccctttcatcccaaaatttctcagaagatgccacttgtctcagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 10379417  T
Q  350 atcatatttcccttatgttatgggtcgaaaga 381  Q
    | |||||||||||||||||| ||||| |||||    
T  10379416 aacatatttcccttatgttaggggtcaaaaga 10379385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 252 - 369
Target Start/End: Complemental strand, 36641376 - 36641259
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    |||||||||||||||| ||  ||||||||||||||||||||| |||||||| ||||||| ||||||| |||| |||||   ||||||| ||| ||||| |    
T  36641376 aattttggcccctttcatcaaaaaattgctgagaagacgccatgtgtcccaaaaaagggatcataatcgcaactttttataaagataacgggtcaaaa-a 36641278  T
Q  351 tcatatttcccttatgtta 369  Q
     ||||||||||||||||||    
T  36641277 gcatatttcccttatgtta 36641259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 19169577 - 19169459
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||| ||  ||  ||||||||||||||||||||||||| ||  ||||| ||| ||||||||||| ||||||  ||||||||||| |||||     
T  19169577 caattttggcccccttgatcctaaaattgctgagaagacgccacgtgttcaaaaaaatgggccataattgcaactttttgtaaagataaggggtcaaaa- 19169479  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  19169478 agcatatttcccttatgtta 19169459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 177 - 296
Target Start/End: Complemental strand, 31648292 - 31648173
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaa 276  Q
    ||||| ||||||||||||| ||| |||||| ||||||||| ||||||||||||| | ||||||        || |||||||| |||||||| || |||||    
T  31648292 tttaggctaaactgcacttttcgtcccctatgtttcaaaatgttgcgattttggccttctattaaaaaaaatggcaattttgacccctttcatcccaaaa 31648193  T
Q  277 ttgctgagaagacgccacgt 296  Q
     |||||||||||||||||||    
T  31648192 ctgctgagaagacgccacgt 31648173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 248 - 369
Target Start/End: Original strand, 35301982 - 35302103
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    |||||||||||||||| || ||| |||| ||| |||| ||||||||||||||||| || ||||| |||||| |||  ||||| |||||||||||| | ||    
T  35301982 tgacaattttggccccctttgtcccaaa-ttgttgagcagacgccacgtgtcccagaacaggggccataatcgcagcttttttagaagataagggtcaaa 35302080  T
Q  347 aagatcatatttcccttatgtta 369  Q
    |||||||||||| | ||||||||    
T  35302081 aagatcatatttacattatgtta 35302103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 17704670 - 17704787
Alignment:
Q  264 tttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    ||||||| ||||||||||||||| | ||||| | ||||||||| |||| ||||||| ||| ||||||  ||||||| ||| |||||  | ||||||||||    
T  17704670 tttcgtcccaaaattgctgagaacatgccacttatcccaaaaaaggggccataatttcaactttttgtaaagataaagggtcaaaaagt-atatttccct 17704768  T
Q  363 tatgttatgggtcgaaaga 381  Q
    ||||||||||||| |||||    
T  17704769 tatgttatgggtcaaaaga 17704787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 375
Target Start/End: Complemental strand, 462996 - 462875
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaagg-ggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    |||||||| ||| |||  ||||||| ||| |||||||||||||||  ||||||  ||||||||| |||| ||||||  ||||||||||| ||||||| ||    
T  462996 tttggcccttttggtccaaaaattgttgaaaagacgccacgtgtctaaaaaagaaggtcataatcgcaactttttgtaaagataaggggtcaaaagaaca 462897  T
Q  354 tatttcccttatgttatgggtc 375  Q
    |||||| ||||| |||| ||||    
T  462896 tatttctcttatattataggtc 462875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 10293161 - 10293275
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtc-ccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    |||||||| |||||||  |||| ||||||||||||||||| ||||   |||||| ||||||||| |||| ||||||  ||||||||| | ||||| | ||    
T  10293161 tttggcccatttcgtcctaaaaatgctgagaagacgccacatgtcttaaaaaagaggtcataatcgcaactttttggaaagataaggagtcaaaa-aaca 10293259  T
Q  354 tatttcccttatgtta 369  Q
    ||||||||||||||||    
T  10293260 tatttcccttatgtta 10293275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 18739923 - 18739837
Alignment:
Q  278 tgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttga-gaagataaggggccaaaagatcatatttccct 362  Q
    |||||||||| |||||||||||||| ||||||||||| ||| | || |||||||  ||||||| ||||||||||| |||||||||||    
T  18739923 tgctgagaagccgccacgtgtcccaaaaaaggggtcaaaatcgtaactttttgataaagataaagggccaaaagagcatatttccct 18739837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 362
Target Start/End: Original strand, 38545373 - 38545459
Alignment:
Q  278 tgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaa-gtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||  ||||||  ||||||| ||||||||||| ||||| |||||    
T  38545373 tgctgagaagccgccacgtgtcccgaaaaaggggtcataatcgcaatttttttgtaaagataatgggccaaaagagcatatatccct 38545459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 20654102 - 20654049
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttgg 230  Q
    ||||| ||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  20654102 tttaggctaaactgcacttttcgacccctaagtttcaaaatgttgtgattttgg 20654049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 362
Target Start/End: Original strand, 8673926 - 8674038
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||| |||| |||||   ||||||| |||||||| | ||||||||  ||||| |||| |||||  ||| ||||||  ||||||||||| ||||||    
T  8673926 acaattttgaccccattcgttctaaaattgttgagaagatgtcacgtgtctaaaaaatgggttataatcacaactttttgtaaagataaggggtcaaaag 8674025  T
Q  350 atcatatttccct 362  Q
    | |||||||||||    
T  8674026 agcatatttccct 8674038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 31576495 - 31576542
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttgg 230  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||    
T  31576495 ctaaactgcacttttcgacccctaagtttcaaaatgttgcaattttgg 31576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 15885467 - 15885415
Alignment:
Q  181 gactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcc 233  Q
    ||||||||||||||| | | |||||||||||||||| ||||| ||||||||||    
T  15885467 gactaaactgcactttttgtcccctaagtttcaaaatgttgctattttggtcc 15885415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 32466133 - 32466078
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    ||||||| |||| ||| |||||||||||||||| |||||||||||| ||| |||||    
T  32466133 taaactgtacttttcgtcccctaagtttcaaaatgttgcgattttgatcccctatt 32466078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 329
Target Start/End: Complemental strand, 7187406 - 7187344
Alignment:
Q  267 cgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttg 329  Q
    |||| |||||||| | | |||||||||| ||||||||||| |||||||||| |||| ||||||    
T  7187406 cgtcacaaaattgtttaaaagacgccacatgtcccaaaaaagggtcataatcgcaactttttg 7187344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 362
Target Start/End: Original strand, 20732628 - 20732713
Alignment:
Q  278 tgctgagaagacgccacgtgtcccaa-aaaggggtcataattgcaagttttt-gagaagataaggggccaaaagatcatatttccct 362  Q
    |||||||||| ||||||||||||||| ||||||| || ||| |||| ||||| |  ||||||| ||||||||||| |||||||||||    
T  20732628 tgctgagaagccgccacgtgtcccaacaaaggggccaaaatcgcaactttttggtaaagataa-gggccaaaagagcatatttccct 20732713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 26639339 - 26639289
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcc 233  Q
    ||||||| ||||| ||| || ||||||||||||| ||||||||||||||||    
T  26639339 ctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggtcc 26639289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 2186790 - 2186827
Alignment:
Q  201 cccctaagtttcaaaaagttgcgattttggtcctctat 238  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  2186790 cccctaagtttcaaaaagttgcaattttggtcttctat 2186827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 179; Significance: 5e-96; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 179; E-Value: 5e-96
Query Start/End: Original strand, 775 - 1052
Target Start/End: Complemental strand, 14208533 - 14208263
Alignment:
Q  775 attttacatgtttgatcgaatgcctcatggatttacttttacaaatcatgttctttttgggttacaaatgtgtgttatgtatttaggctttgaaattgtc 874  Q
    |||||||||||||||| |||||||||||||||| |||||||||| |||||||| ||| |||||||||||||||||| | |||||||||| |||||||||     
T  14208533 attttacatgtttgattgaatgcctcatggatt-acttttacaactcatgttcatttagggttacaaatgtgtgttttatatttaggctatgaaattgtg 14208435  T
Q  875 tccaagtcttgttaaattcttcaatgaatccttttatttaagttgtgaattcaattctctaacaccattatgcaagggattgagaagagataaaacatgg 974  Q
    |||||||| ||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||| |||||||| |||||||||| ||    
T  14208434 tccaagtcctgttaaattcttcaatgaatccttttatttaagt------ttcaattctctaacaccattatgcaaggtattgagaatagataaaacaggg 14208341  T
Q  975 ctcttgattttgttttatttatctggattttttgtaggatatactccgttctgaaaggtagtactaacaaactactct 1052  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||  ||||||||||||    
T  14208340 ctcttgattttgttttatttatccggattttttgtaggatatactccgtcccgaaaggtagtaccgacaaactactct 14208263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 14208746 - 14208584
Alignment:
Q  18 caattttctataaatattatttttggcaatgaattaggtagttggtaggcaagaattatgtgatttcctttccttctggtggtgtttagttgaaggtaca 117  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||| |    
T  14208746 caattttctataaatattgtttttggcaatgaattagatagttggtaggtaagaattatgtgattttctttcattctggtagtgtttagttgaaggtaaa 14208647  T
Q  118 actatatttgtcctaattttgcattaatctctttgaattttgcaattgaatcattaaaattta 180  Q
    | ||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  14208646 attatatttgtcctaattttgcactattctctttgaattttgcaattgaatcattaaatttta 14208584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 172 - 369
Target Start/End: Complemental strand, 26240270 - 26240072
Alignment:
Q  172 taaaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtct 271  Q
    |||| ||||| ||||||||||||| |||||   |||| ||||||  |||||||||||||||| |||||        | ||||||||||||| ||||||      
T  26240270 taaattttaggctaaactgcacttttcgactattaaggttcaaagtgttgcgattttggtcccctattaaaaaaatttacaattttggcccatttcgttc 26240171  T
Q  272 caaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||| ||| ||||||||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  26240170 caaaactgccgagaagacgccacgtgtcctataaaaggggtcataattgcaacttttttagaagataaggggtcaaaagatcatatttcccttatgtta 26240072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 35102493 - 35102679
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||| |||||| ||||||||| ||||||||||| | || |||||        || ||||||||||||| ||| || |||||||||||    
T  35102493 ctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttagccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgctg 35102592  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  35102593 agaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 35102679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 201 - 369
Target Start/End: Original strand, 12291437 - 12291606
Alignment:
Q  201 cccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcc 300  Q
    |||||||||||||||| ||||||||||||| ||  ||||        || ||||||||| || ||||||| |||||||| ||||||||||||| ||||||    
T  12291437 cccctaagtttcaaaatgttgcgattttggccccttattaaaaaaaatggcaattttggtccatttcgtcacaaaattgttgagaagacgccatgtgtcc 12291536  T
Q  301 caaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||| ||  |||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  12291537 caaaacagatgtcataatcgcaactttttgagaagataaagggtcaaaagatcatatttcccttatgtta 12291606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 184 - 369
Target Start/End: Original strand, 4597408 - 4597593
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctga 283  Q
    |||| ||||||| ||| |||||| ||||||||| |||||||||||||||| |||||        |||||||||||||||| |||  | ||||||| ||||    
T  4597408 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtcccctattaaaaaaaatgacaattttggcccccttcaacccaaaattactga 4597507  T
Q  284 gaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
     |||||||||| |||||| ||||||||| ||||||||||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  4597508 aaagacgccacatgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 4597593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 34528385 - 34528263
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||| |||||||||| ||  | |||||| |||| ||||||||||||||||||| |||    
T  34528385 tgacaattttggcccctttcgtcccaaaattgctgagaagacatcacatgtcccaaaacagtcgccataatcgcaactttttgagaagataaggggtcaa 34528286  T
Q  347 aagatcatatttcccttatgtta 369  Q
    |||||||||||||  ||||||||    
T  34528285 aagatcatatttcatttatgtta 34528263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 255 - 381
Target Start/End: Complemental strand, 22269636 - 22269510
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||   ||| ||||||  ||||||||||| ||||| | ||    
T  22269636 tttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaaaaggggccataaacacaactttttgtaaagataaggggtcaaaa-aaca 22269538  T
Q  354 tatttcccttatgttatgggtcgaaaga 381  Q
    |||||||||||||||| ||||| |||||    
T  22269537 tatttcccttatgttaagggtcaaaaga 22269510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 252 - 369
Target Start/End: Complemental strand, 25819917 - 25819800
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    |||||||||||||||  ||  |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| ||||| |    
T  25819917 aattttggccccttttatcaaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-a 25819819  T
Q  351 tcatatttcccttatgtta 369  Q
     ||||||||||||||||||    
T  25819818 gcatatttcccttatgtta 25819800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 16415335 - 16415519
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    |||||||||| || ||||| ||||| ||| |||||||||| |||||||||  ||||||       ||| |||||||| |||||||||| |||||||||||    
T  16415335 ctaaactgcaattttcgactcctaaattttaaaaagttgctattttggtctcctatttaaaaaa-tgataattttggtccctttcgtcccaaaattgctg 16415433  T
Q  283 agaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||| || || ||  ||||| |||| ||||| |||| ||||| |||||||||| || ||||| ||||||||||||||||||||    
T  16415434 agaagacgacatgt-tctaaaaaatgggttataatcgcaacttttttagaagataagcggtcaaaatatcatatttcccttatgtta 16415519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 9241882 - 9241767
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    |||| |||||||| |  ||||||| |||||||| ||||| ||||||||||| || || |||||| |||| ||||||||||||||||||| ||||||||||    
T  9241882 tttgacccctttcattccaaaattactgagaaggcgccatgtgtcccaaaacagagggcataatcgcaactttttgagaagataaggggtcaaaagatca 9241783  T
Q  354 tatttcccttatgtta 369  Q
    ||||||||||||||||    
T  9241782 tatttcccttatgtta 9241767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 201 - 369
Target Start/End: Complemental strand, 18791641 - 18791473
Alignment:
Q  201 cccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcc 300  Q
    |||||| |||| |||| ||||||||||||| || ||||||       || ||||||||||||| ||| || |||||||| ||||||||||||||||||||    
T  18791641 cccctatgttttaaaatgttgcgattttggccccctatttaaaaaaatggcaattttggcccccttcatcccaaaattgttgagaagacgccacgtgtcc 18791542  T
Q  301 -caaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
      ||||||||| |||||| |||| ||||||  ||||| ||||| ||||| | ||||||||||||||||||    
T  18791541 taaaaaaggggccataatcgcaactttttgtaaagatgaggggtcaaaa-agcatatttcccttatgtta 18791473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 250 - 369
Target Start/End: Complemental strand, 32451961 - 32451842
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtc-ccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    |||||||||||||||||| ||  ||||||| |||||||||||||| |||| | |||||||||||||||| |||| ||||||  ||||||||||| |||||    
T  32451961 acaattttggcccctttcatccaaaaattgttgagaagacgccacatgtctcaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa 32451862  T
Q  349 gatcatatttcccttatgtta 369  Q
     | ||||||||||||||||||    
T  32451861 -agcatatttcccttatgtta 32451842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 31211028 - 31210910
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| || |||||||||||||||||| |||||||||||| |||||| |  ||||| |||| ||||||  ||||||||||| |||||     
T  31211028 caattttggcccctttcatcccaaaattgctgagaagacaccacgtgtcccaaaaaaggtgctataatcgcaactttttgtaaagataaggggtcaaaa- 31210930  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  31210929 agcatatttcccttatgtta 31210910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 34834159 - 34834041
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||  ||| || ||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||  ||||||| ||| |||||     
T  34834159 caattttggcccacttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgtaactttttgtaaagataacgggtcaaaa- 34834061  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  34834060 aacatatttcccttatgtta 34834041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 24603598 - 24603477
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcc-caaaaaggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    |||||| ||||||||| ||| || |||||||||||||||||||||| ||||||  ||||||||| |||||| |||| ||||||  ||||||||||| |||    
T  24603598 tgacaactttggcccccttcatcccaaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaa 24603499  T
Q  347 aagatcatatttcccttatgtta 369  Q
    || | ||||||||||||||||||    
T  24603498 aa-agcatatttcccttatgtta 24603477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 250 - 369
Target Start/End: Complemental strand, 3118914 - 3118795
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    |||||||||||||||||| || |||||||| | |||||| | ||||||||||| ||||||||||||||| |||| ||||||  |||||||| || |||||    
T  3118914 acaattttggcccctttcatcccaaaattgatcagaagatgtcacgtgtcccagaaaaggggtcataatcgcaaatttttgtaaagataagaggtcaaaa 3118815  T
Q  349 gatcatatttcccttatgtta 369  Q
     | ||||||||||||||||||    
T  3118814 -aacatatttcccttatgtta 3118795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 23124794 - 23124898
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcc-caaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    ||||||| | |||||| |||| |||||||||||||||||| ||||| ||||||||||||||||| |||| ||||||  ||||||||||| ||||||| ||    
T  23124794 tttggcctcgttcgtcccaaacttgctgagaagacgccacatgtcctcaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaagagca 23124893  T
Q  354 tattt 358  Q
    |||||    
T  23124894 tattt 23124898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 264 - 369
Target Start/End: Original strand, 19282296 - 19282399
Alignment:
Q  264 tttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttccctt 363  Q
    ||||||| ||||||||||||||||| | ||| ||||| |||||||||||||||| |||| ||||||| ||||||||||| |||||   ||||||||||||    
T  19282296 tttcgtcccaaaattgctgagaagaagtcacatgtcc-aaaaaggggtcataatcgcaactttttgaaaagataaggggtcaaaa-tgcatatttccctt 19282393  T
Q  364 atgtta 369  Q
    ||||||    
T  19282394 atgtta 19282399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 251 - 355
Target Start/End: Original strand, 20863798 - 20863903
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||| ||||| ||||||  |||||||||||||||||||||| ||||||| ||||||||| |||||| |||| ||||||  ||||||||||| ||||||    
T  20863798 caatttcggcccttttcgttccaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaag 20863897  T
Q  350 atcata 355  Q
    | ||||    
T  20863898 agcata 20863903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 185 - 369
Target Start/End: Original strand, 14572182 - 14572366
Alignment:
Q  185 aaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctgag 284  Q
    ||||||||||| ||| |||||| |||| |||| ||||| ||||||| || |||||        |  ||||||||||||||||| ||  ||||||||||||    
T  14572182 aaactgcacttttcgccccctatgttttaaaatgttgcaattttggccccctattaaaaaaaatagcaattttggcccctttcatccaaaaattgctgag 14572281  T
Q  285 aagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||| ||||| |||||| ||||| ||| |||||| |||| |||||   ||||||||||| ||||| | ||||||||||||||||||    
T  14572282 aagatgccacatgtcccaaaaaaagggccataatcgcaactttttataaagataaggggtcaaaa-agcatatttcccttatgtta 14572366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 250 - 369
Target Start/End: Original strand, 22968225 - 22968342
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||||||||| || |||||||||| |||||| | |||||||| || ||| |||||||||| |||| ||||||  |||||||||| |  |||     
T  22968225 acaattttggcccctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaagggtcataatcgcaactttttgtaaagataagggtc--aaaa 22968322  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  22968323 aacatatttcccttatgtta 22968342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 250 - 369
Target Start/End: Complemental strand, 23820168 - 23820051
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||||||||| || |||||||||| |||||| | |||||||| || ||| |||||||||| |||| ||||||  |||||||||| |  |||     
T  23820168 acaattttggcccctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaagggtcataatcgcaactttttgtaaagataagggtc--aaaa 23820071  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  23820070 aacatatttcccttatgtta 23820051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 250 - 381
Target Start/End: Complemental strand, 4371127 - 4371001
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||||||||| |||||||||||||||||| ||||||  |||||||||||      | | | |||| ||||||  ||||||||||| |||| |    
T  4371127 acaattttggcccctttcatctcaaaattgctgagaaaacgccatatgtcccaaaaa-----aaaagtcgcaactttttgtaaagataaggggtcaaagg 4371033  T
Q  350 atcatatttcccttatgttatgggtcgaaaga 381  Q
    | |||||||||||||||||| ||||| |||||    
T  4371032 agcatatttcccttatgttaggggtcaaaaga 4371001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 24051242 - 24051124
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||| |||| || |||||||| |||||||||||||||||||||| ||||| ||||||||| |||| ||||||  || |||||||| |||||     
T  24051242 caattttggcccatttcatcccaaaattgatgagaagacgccacgtgtcccaaaaaagaggtcataatcgcaactttttgtaaatataaggggtcaaaa- 24051144  T
Q  350 atcatatttcccttatgtta 369  Q
    |  ||||||| |||||||||    
T  24051143 agtatatttctcttatgtta 24051124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 15298718 - 15298601
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    |||||||||| || ||  |||||||||||||||||||||||||| ||||||||||| ||  |||||| |||| ||||||  ||||||||||  ||||| |    
T  15298718 caattttggctccctttatctcaaaattgctgagaagacgccacttgtcccaaaaaaggaccataatcgcaactttttgtaaagataagggatcaaaa-a 15298620  T
Q  351 tcatatttcccttatgtta 369  Q
     ||||||| ||||||||||    
T  15298619 acatattttccttatgtta 15298601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 2058904 - 2058991
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagata 337  Q
    |||||||||||  |||||||||||||||||||||||||||| || ||||| |||| ||||||||||||  ||| ||||| ||||||||    
T  2058904 caattttggccattttcgtctcaaaattgctgagaagacgctacatgtcctaaaacaggggtcataatcccaacttttttagaagata 2058991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 26710378 - 26710495
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||| |||||||| | || ||||||| ||||||||| |||||||||||| ||||||||| |||||| |||| ||||||  ||||||||||| |||||     
T  26710378 caatttcggcccctt-catcccaaaattactgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 26710475  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||| ||||||||||    
T  26710476 aacatattttccttatgtta 26710495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 369
Target Start/End: Complemental strand, 2637013 - 2636892
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc--aaaaaggggtcataattgcaagtttttgagaagataaggggccaaa 347  Q
    |||||||||||||||||||||  |||||||  ||||||||||||| ||| ||   ||| ||||||||||| |||| ||||||  || |||||||| ||||    
T  2637013 acaattttggcccctttcgtcctaaaattgaagagaagacgccacatgttcctagaaagggggtcataatcgcaactttttgtaaaaataaggggtcaaa 2636914  T
Q  348 agatcatatttcccttatgtta 369  Q
    | | ||||||| ||||||||||    
T  2636913 atagcatatttaccttatgtta 2636892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 369
Target Start/End: Complemental strand, 12427468 - 12427347
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaa-aaggggtcataattgcaa-gtttttgagaagataaggggccaaa 347  Q
    |||||||||||| |||||||| ||||||||||||||||| | ||||||||||||| || |||||| ||| ||||  ||||||  ||||||| |||  |||    
T  12427468 acaattttggcctctttcgtcgcaaaattgctgagaagatggcacgtgtcccaaagaatgggtcaaaatcgcaacttttttgtaaagataaagggtaaaa 12427369  T
Q  348 agatcatatttcccttatgtta 369  Q
    | | ||||||||| ||||||||    
T  12427368 aaaacatatttcctttatgtta 12427347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 371
Target Start/End: Original strand, 18749166 - 18749286
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| |   ||||||| | |||||| ||||| |||||| ||||||||| ||||||  ||| ||||||  ||||||||||| |||||     
T  18749166 caattttggcccctttcatacaaaaattgataagaagaagccacatgtcccaaaaaaggggacataatcacaactttttgtaaagataaggggtcaaaa- 18749264  T
Q  350 atcatatttcccttatgttatg 371  Q
    | ||||||||||||||||||||    
T  18749265 agcatatttcccttatgttatg 18749286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 305 - 365
Target Start/End: Original strand, 4013791 - 4013851
Alignment:
Q  305 aaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttat 365  Q
    |||||| |||||| ||||  |||||||||||||||||| ||||||||||||||||||||||    
T  4013791 aaggggccataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttat 4013851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 291 - 369
Target Start/End: Complemental strand, 8412952 - 8412874
Alignment:
Q  291 ccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||| ||||||||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  8412952 ccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 8412874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 252 - 369
Target Start/End: Complemental strand, 14195792 - 14195675
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagat 351  Q
    ||||||||| ||||| ||  ||||||||||||| ||||||||||| ||  |||||  |  |||||| |||| ||||||  || ||||||||| ||||||     
T  14195792 aattttggctcctttagttccaaaattgctgagtagacgccacgtttcaaaaaaaaagtgcataatcgcaactttttgtaaaaataaggggctaaaagac 14195693  T
Q  352 catatttcccttatgtta 369  Q
    ||||||||||| ||||||    
T  14195692 catatttccctcatgtta 14195675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 4013967 - 4013911
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||||| || |||||    
T  4013967 ctaaactgcacttttcgtcccctaagtttcaaaatgttgcgattttggccccctatt 4013911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 381
Target Start/End: Original strand, 24615764 - 24615894
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa--aggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||| ||||||||  |||||||||||||| ||||||| ||||||||||  | |||||||||| |||| |||| |  |||| || ||| |||||     
T  24615764 aattttggcctctttcgtccaaaaattgctgagaaaacgccacatgtcccaaaaataagggtcataatcgcaacttttagtaaagagaatgggtcaaaa- 24615862  T
Q  350 atcatatttcccttatgttatgggtcgaaaga 381  Q
    | |||||||| | ||||||| ||||| |||||    
T  24615863 agcatatttctcatatgttaggggtcaaaaga 24615894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 22269412 - 22269468
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    ||||||||||||| ||| || |||||||||||||  |||||||||||| ||||||||    
T  22269412 ctaaactgcacttttcgtcctctaagtttcaaaatattgcgattttggccctctatt 22269468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 18791355 - 18791416
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||| ||||||| ||||| ||| || |||||||| |||| ||||||||||||| ||||||||    
T  18791355 ttaggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggccctctatt 18791416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 24051006 - 24051067
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||| ||||||| ||||| ||| || ||||||||||||| ||||||||||||| || |||||    
T  24051006 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 24051067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 8e-61; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 45043816 - 45043665
Alignment:
Q  18 caattttctataaatattatttttggcaatgaattaggtagttggtaggcaagaattatgtgatttcctttccttctggtggtgtttagttgaaggtaca 117  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||| | ||||||||||||||| |||||||||||||||||||    
T  45043816 caattttctataaatattgtttttggcaatcaattaggtagttggtaggtaagaattctgtgctgtcctttccttctggtagtgtttagttgaaggtaca 45043717  T
Q  118 actatatttgtcctaattttgcattaatctctttgaattttgcaattgaatc 169  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45043716 actatatttgtcctaattttgcactaatctctttgaattttgcaattgaatc 45043665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 22416571 - 22416449
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaa-aaggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||| ||| |||    
T  22416571 tgacaattttggcccccttcgtcccaaaattgttgagaagacgccacgtgtcccaaataaggggtcataattgcaactttttgtaaagataatgggtcaa 22416472  T
Q  347 aagatcatatttcccttatgtta 369  Q
    |||| ||||||| ||||||||||    
T  22416471 aagagcatatttaccttatgtta 22416449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 26628027 - 26628213
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||| ||||| ||| |||||| ||||||||| ||||| ||||||| || |||||        || ||||||||||||||||| || |||||||||||    
T  26628027 ctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaattttggcccctttcatcccaaaattgctg 26628126  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| ||||||||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  26628127 agaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 26628213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 203 - 373
Target Start/End: Complemental strand, 36311433 - 36311262
Alignment:
Q  203 cctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca 302  Q
    |||||||||||||| |||| ||||||||||| ||||||       || |||||||||||||||||||| |||||||| |||||||| |||||||||||||    
T  36311433 cctaagtttcaaaatgttgtgattttggtcccctatttaaaaaaatggcaattttggcccctttcgtcccaaaattgttgagaagaagccacgtgtccca 36311334  T
Q  303 aaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatggg 373  Q
    ||| | ||| | |||| |||| | |||||||||||||||||  ||||  |||||||||||||||||||||||    
T  36311333 aaatatgggccgtaatcgcaactatttgagaagataaggggttaaaatgtcatatttcccttatgttatggg 36311262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 191 - 381
Target Start/End: Complemental strand, 23320654 - 23320464
Alignment:
Q  191 cacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctgagaagacg 290  Q
    ||||| |||||| |||||||| |||| |||||||||||| ||| |||||        | ||||||||||||||||||||| |||||||||||| ||||||    
T  23320654 cacttttcgaccactaagttttaaaatgttgcgattttgatcccctattaaaaaaaattacaattttggcccctttcgtcccaaaattgctgaaaagacg 23320555  T
Q  291 ccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaaga 381  Q
    |||| ||||||||||||||| |||||| |||| ||||||||||||||||  | ||| | |||| | ||| ||||||||| ||||| |||||    
T  23320554 ccacatgtcccaaaaaggggccataatagcaactttttgagaagataagaagtcaatatatcagacttctcttatgttaggggtcaaaaga 23320464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 177 - 365
Target Start/End: Original strand, 34878525 - 34878713
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaa 276  Q
    ||||| ||||||||||||||||| |||||| ||||||||| ||||||||||||| || |||||        || |||||||| ||| |||| ||||||||    
T  34878525 tttaggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttgacccatttcatctcaaaa 34878624  T
Q  277 ttgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttat 365  Q
    ||||||||||||||||||||||||| ||||||| | |||||||| || ||||||  ||||||||||  ||||| | ||||||||||||||    
T  34878625 ttgctgagaagacgccacgtgtcccaaaaaaggtgccataattgaaactttttgtaaagataagggatcaaaa-agcatatttcccttat 34878713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 3328815 - 3329001
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| |||||| ||||||||| ||| | ||||||| || |||||        |  ||||||||||||||||| ||  ||||||||||    
T  3328815 ctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggccccctattaaaaaaaatagcaattttggcccctttcatccaaaaattgctg 3328914  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| ||||||||| |||||| |||| ||||||  ||||||||||| ||||||  ||||||||||||||||||    
T  3328915 agaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaag-gcatatttcccttatgtta 3329001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 178 - 369
Target Start/End: Original strand, 28173726 - 28173917
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaat 277  Q
    |||| ||||| ||||||| ||| |||||| |||||| || ||||||||||||| || |||||        |  ||||||||||||||||| || ||||||    
T  28173726 ttaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctattaaaaaaagtagcaattttggcccctttcatcccaaaat 28173825  T
Q  278 tgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||  ||||| ||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  28173826 tgctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 28173917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 48907362 - 48907480
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| |||||| |||| |||||   ||||||||||| |||||     
T  48907362 caattttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttttaaagataaggggtcaaaa- 48907460  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  48907461 agcatatttcccttatgtta 48907480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 23428621 - 23428807
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| |||||| |||||| || ||||| ||||| |||| |||||        |  | ||||||||||||||| || ||||||||||     
T  23428621 ctaaactgcacttttcgccccctatgtttcataatgttgcaattttagtcccctattaaaaaaaatagctattttggcccctttcatcccaaaattgctc 23428720  T
Q  283 agaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||| ||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  23428721 agaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 23428807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 27852822 - 27852939
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    ||||||||||||| |||  | |||||||| |||||||||||||||||||||||||||||| |||||| |||| ||||||  ||||||||||| ||||| |    
T  27852822 caattttggcccccttcagcccaaaattgttgagaagacgccacgtgtcccaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-a 27852920  T
Q  351 tcatatttcccttatgtta 369  Q
     ||||||||||||||||||    
T  27852921 gcatatttcccttatgtta 27852939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 28154884 - 28155070
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||| ||||| ||| |||||| ||||||||| ||||| ||||||| || |||||        || ||||||||||||||||| ||  ||||||||||    
T  28154884 ctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaattttggcccctttcatccaaaaattgctg 28154983  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| ||||| ||| |||||| |||| ||||||  |||||||| || ||||| | ||||||||||||||||||    
T  28154984 agaagacgccacgtgtcccaaaaaaagggccataatcgcaactttttgtaaagataagaggtcaaaa-agcatatttcccttatgtta 28155070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 178 - 371
Target Start/End: Complemental strand, 13081201 - 13081008
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaat 277  Q
    |||| ||||| ||| ||| ||| | |||| ||||||||| ||||||||||||| || |||||        || ||||||||||||| ||| || ||||||    
T  13081201 ttaggctaaagtgcgcttttcgcctcctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaat 13081102  T
Q  278 tgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatg 371  Q
    |||||||||||| |||| ||||||| |||||||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||||    
T  13081101 tgctgagaagactccacatgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttatg 13081008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 178 - 369
Target Start/End: Complemental strand, 1743556 - 1743365
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaat 277  Q
    |||| ||||||||||||| |||  |||||||||| |||| |||||||||||||||| |||||        |  ||||||| | |||||| ||| ||||||    
T  1743556 ttaggctaaactgcacttttcgctccctaagttttaaaatgttgcgattttggtcccctattataaaaaatagcaattttagtcccttttgtcacaaaat 1743457  T
Q  278 tgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||| |||||||||| |  || | | || |||| ||||||||||||||||||| |||||||||| |||| ||||||||||    
T  1743456 tgctgagaagacgccacatgtcccaaaacaatggcccttatcgcaactttttgagaagataaggggtcaaaagatcacattt-ccttatgtta 1743365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 4522188 - 4522070
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||||||| ||||||||  ||||| |||| ||||||  ||||||||||| |||||     
T  4522188 caattttggcccctttcatcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggcaataatcgcaactttttgtaaagataaggggtcaaaa- 4522090  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  4522089 agcatatttcccttatgtta 4522070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 8542844 - 8542726
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtc-ccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||| || ||| || |||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||  ||||||||||| |||||     
T  8542844 caattttggctcccttcatcccaaaattgctgagaagacgccacgtgtcacaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa- 8542746  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  8542745 agcatatttcccttatgtta 8542726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 373
Target Start/End: Original strand, 25022733 - 25022855
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| || |||||||||| |||||| ||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||  |||||     
T  25022733 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataagggttcaaaa- 25022831  T
Q  350 atcatatttcccttatgttatggg 373  Q
    | ||||| ||||||||||||||||    
T  25022832 aacatatatcccttatgttatggg 25022855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 8338942 - 8339128
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||| |||||| ||||||||| ||||||||||||  || |||||        || ||||||||||||| ||| || |||||||||||    
T  8338942 ctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgctg 8339041  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| |||||| || |||||| |||| ||||||  ||||||||||| ||||| | ||||||||  ||||||||    
T  8339042 agaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttctattatgtta 8339128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 20002009 - 20001825
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||  |||||||||||||||| ||||||||||||| || |||||         | |||||||| ||| |||| || |||||||| ||    
T  20002009 ctaaactgcacttttct-cccctaagtttcaaaatgttgcgattttggccccctattaaaaaaatag-caattttgccccttttcatcccaaaattgttg 20001912  T
Q  283 agaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||| |||||| ||||| |||| | |||| |||||||||| |||||||| ||| ||||||||||||||||||||||    
T  20001911 agaagacgccacgtgttccaaaacaggggccatagtcgcaactttttgagaatataagggg-caagagatcatatttcccttatgtta 20001825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 172 - 362
Target Start/End: Original strand, 32960636 - 32960823
Alignment:
Q  172 taaaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtct 271  Q
    |||| ||||| |||||||||| || ||| |||||| ||||||||| ||||| ||||||| || |||||        || ||||||||||||||||| ||     
T  32960636 taaattttaggctaaactgcatttttcgccccctatgtttcaaaatgttgcaattttggccc-ctatt-aaaaaaatggcaattttggcccctttcatcc 32960733  T
Q  272 caaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    ||||||| |||||||||||||||||||||||||||  || |||||| |||| ||||||  ||||||||||| ||||| | |||||||||||    
T  32960734 caaaattactgagaagacgccacgtgtcccaaaaaaaggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttccct 32960823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 251 - 374
Target Start/End: Complemental strand, 10743641 - 10743518
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| || |||||||||| | |||| |||||||| |||| ||||||||||||||| |||| ||||||  ||||||||||| |||||     
T  10743641 caattttggcccctttcatcccaaaattgctcaaaagatgccacgtgacccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 10743543  T
Q  350 atcatatttcccttatgttatgggt 374  Q
    | |||||||||||||||||| ||||    
T  10743542 aacatatttcccttatgttaggggt 10743518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 250 - 369
Target Start/End: Original strand, 30155214 - 30155333
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    |||||||||||||||||| ||  |||||||||| |||||||||| ||||||| ||||||||| |||||| |||| ||||||  ||||||||||| |||||    
T  30155214 acaattttggcccctttcatcaaaaaattgctgcgaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa 30155313  T
Q  349 gatcatatttcccttatgtta 369  Q
     | ||||||||||||||||||    
T  30155314 -aacatatttcccttatgtta 30155333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 183 - 365
Target Start/End: Original strand, 40836182 - 40836363
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||| ||||| ||| ||||||||||| |||| ||||||||||||||||||||||        || | |||||||||||||||||  |||||||||||    
T  40836182 ctaaactacacttttcgtcccctaagttttaaaatgttgcgattttggtcctctatt-aaaaaaatg-cgattttggcccctttcgttccaaaattgctg 40836279  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgaga-agataaggggccaaaagatcatatttcccttat 365  Q
    ||||| ||||||||||||| ||||||||| |||||| |||| |||||  || | |||||||| ||||| | ||||||||||||||    
T  40836280 agaagccgccacgtgtcccaaaaaaggggccataatcgcaactttttttgagatataaggggtcaaaa-aacatatttcccttat 40836363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 251 - 362
Target Start/End: Complemental strand, 6927704 - 6927593
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||| ||||||||| || |||||||||| |||||| ||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| |||||     
T  6927704 caattttagcccctttcatcccaaaattgctcagaagatgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 6927606  T
Q  350 atcatatttccct 362  Q
    | |||||||||||    
T  6927605 aacatatttccct 6927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 252 - 381
Target Start/End: Original strand, 31039048 - 31039178
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtc-ataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    |||||||||| ||||||||  |||||||||||||||||||||| ||| | ||||| ||| | ||||| |||| ||||| ||||||||| ||| ||  |||    
T  31039048 aattttggcctctttcgtccaaaaattgctgagaagacgccacatgttctaaaaaaggggctataatcgcaactttttaagaagataaagggtcattaga 31039147  T
Q  351 tcatatttcccttatgttatgggtcgaaaga 381  Q
    ||||||||||| ||||||| ||||| |||||    
T  31039148 tcatatttcccatatgttaggggtcaaaaga 31039178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 273 - 381
Target Start/End: Complemental strand, 3781090 - 3780982
Alignment:
Q  273 aaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatg 371  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| | |||| ||||||  ||||||| ||| ||||| | |||||||||||||||||| |    
T  3781090 aaaattgctgagaagacaccacgtgtcccaaaaaaggggtcatattcgcaactttttgtaaagataaagggtcaaaa-agcatatttcccttatgttagg 3780992  T
Q  372 ggtcgaaaga 381  Q
    |||| |||||    
T  3780991 ggtcaaaaga 3780982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 46673117 - 46673235
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaa-gtttttgagaagataaggggccaaaa 348  Q
    ||||||||||||||||| || |||||||||| |||||| ||||||||||| | ||||||||||||||| ||||  ||||||  ||||||||||| ||||     
T  46673117 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcctagaaaaggggtcataatcgcaacttttttgtaaagataaggggtcaaa- 46673215  T
Q  349 gatcatatttcccttatgtta 369  Q
     | ||||||||||||||||||    
T  46673216 -aacatatttcccttatgtta 46673235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 46387651 - 46387743
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataagggg 342  Q
    |||||||||||| |||| ||||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||| ||||||||  |||||||||||    
T  46387651 caattttggcccatttcatctcaaaattgatgagaagacgccatgtgttccaaaaaaggggccataattgctagtttttggaaagataagggg 46387743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 255 - 381
Target Start/End: Original strand, 26633433 - 26633559
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    ||||||||||||||||  |||||||| ||||||  |||||||| ||| ||||||||| |||||| |||| ||||||  ||||||||||| ||||| | ||    
T  26633433 tttggcccctttcgtccaaaaattgccgagaaggtgccacgtgccccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-aaca 26633531  T
Q  354 tatttcccttatgttatgggtcgaaaga 381  Q
    |||||| ||||||||| ||||| |||||    
T  26633532 tatttctcttatgttaggggtcaaaaga 26633559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 182 - 369
Target Start/End: Complemental strand, 32315220 - 32315035
Alignment:
Q  182 actaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgct 281  Q
    |||||||||||||| ||| ||| ||||||| |||| ||||||||||| |||| |||||        ||||||||||||  ||||||||| |||||||| |    
T  32315220 actaaactgcacttttcgtcccttaagttttaaaatgttgcgattttcgtcc-ctatt-aaaaaaatgacaattttgggtcctttcgtcccaaaattgtt 32315123  T
Q  282 gagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||| ||||| |||| | ||| ||| || |||  |||||||| |||||||||| ||||| || |||||||||| ||||||    
T  32315122 gagaagacgccacatgtcctaaaacatgggccat-atcgcagctttttgaggagataaggggtcaaaatataatatttccctcatgtta 32315035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 273 - 362
Target Start/End: Complemental strand, 3821094 - 3821004
Alignment:
Q  273 aaaattgctgagaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||| |||| ||||||  ||||||| ||| ||||||| |||||||||||    
T  3821094 aaaattgctgagaagacaccacatgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaagggtcaaaagagcatatttccct 3821004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 26126976 - 26127094
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcc-caaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||   |||||| |||||||||||||||||||||||  ||||  |||||| || |||||| |||| ||||||  |||||||||||||||||     
T  26126976 caattttggcctacttcgtcgcaaaattgctgagaagacgccacaagtccaaaaaaagaggccataatcgcaactttttgtaaagataaggggccaaaa- 26127074  T
Q  350 atcatatttcccttatgtta 369  Q
    | |||||||||| |||||||    
T  26127075 agcatatttcccctatgtta 26127094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 33279655 - 33279773
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtc-ccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||| ||||||| |||  ||||||||||||||||||||||||||| | ||||| |||||||||| | ||  |||||  || |||||||  ||||||    
T  33279655 caattttgacccctttggtccaaaaattgctgagaagacgccacgtgtctcaaaaaaagggtcataatcgtaa-cttttgtaaatataagggatcaaaag 33279753  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  33279754 agcatatttcccttatgtta 33279773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 369
Target Start/End: Original strand, 35201062 - 35201184
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    |||||||||||   |||||| || |||||||| |||||||| ||||| ||||| |||| ||| | ||| || | || ||||||||||||||||||| |||    
T  35201062 tgacaattttgttacctttcatcccaaaattgttgagaagatgccacatgtcctaaaacaggagccatgatcgtaactttttgagaagataaggggtcaa 35201161  T
Q  347 aagatcatatttcccttatgtta 369  Q
    || ||||||||||| ||||||||    
T  35201162 aatatcatatttcctttatgtta 35201184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 22447742 - 22447932
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| |||||| ||||||||| ||||| ||||||| || |||||        |  ||||||||| ||||||| ||  |||||| |||    
T  22447742 ctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatagcaattttggaccctttcatccaaaaatttctg 22447841  T
Q  283 agaagacgccacgtgtcc-caaaaaggggtcataattgcaagtttttgagaag----ataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||| |||  ||||||||| |||||| |||| ||||||  |||    |||||||| ||||| | ||||||||||||||||||    
T  22447842 agaagacgccacgtatccaaaaaaaggggccataatcgcaactttttgtaaagatatataaggggtcaaaa-agcatatttcccttatgtta 22447932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 25179810 - 25179694
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||| ||||||| ||| || ||||||||||||||||||||  |||||||| ||||||||| |||||| |||| ||||||  ||||||||||| |||||     
T  25179810 caattatggcccccttcatcccaaaattgctgagaagacgc--cgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 25179714  T
Q  350 atcatatttcccttatgtta 369  Q
    | |||||||| |||| ||||    
T  25179713 aacatatttctcttacgtta 25179694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 369
Target Start/End: Complemental strand, 25336587 - 25336471
Alignment:
Q  254 ttttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatc 352  Q
    |||||||| ||||||| ||||||||||||| |||||| | | |||| ||||| || ||  ||||| |||| ||||||||||| |||  || |||||| ||    
T  25336587 ttttggcctctttcgtatcaaaattgctgaaaagacgtcgcatgtctcaaaacagaggcaataatcgcaactttttgagaagttaaaaggtcaaaaggtc 25336488  T
Q  353 atatttcccttatgtta 369  Q
    |||||||||||||||||    
T  25336487 atatttcccttatgtta 25336471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 22500665 - 22500783
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcc-caaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||| ||||||||| ||  |||||| |||||||||||||||||||||  ||||||||  |||||| |||| ||||||  || |||||||  |||||     
T  22500665 caattttagcccctttcatccaaaaatttctgagaagacgccacgtgtccaaaaaaagggaccataatcgcaactttttgtaaatataagggatcaaaa- 22500763  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  22500764 agcatatttcccttatgtta 22500783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 26177026 - 26177144
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||  ||||||| ||||||||||||||||| |||||  ||||| |||||| || |||||| |||| ||||||  ||||||| | |||||||     
T  26177026 caattttggcctatttcgtcccaaaattgctgagaagaagccacaagtcccaaaaaagaggccataatcgcaactttttgtaaagataatgagccaaaa- 26177124  T
Q  350 atcatatttcccttatgtta 369  Q
    | |||||||||| |||||||    
T  26177125 agcatatttcccctatgtta 26177144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 43668641 - 43668566
Alignment:
Q  272 caaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||| |||| ||||||  || ||||||| ||||    
T  43668641 caaaattgctgagaagacgccacatgtcccaaaacaggggtcataatcgcaactttttgtaaaaataagggaccaa 43668566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 366
Target Start/End: Complemental strand, 33105175 - 33105059
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||  |||| || |||||||| ||||||||||||||||||||||||| | |||  ||||| | || |||||| ||||| |||||  |||||     
T  33105175 caattttggcctatttcatcccaaaattgatgagaagacgccacgtgtcccaaaacatgggaaataatcgaaactttttgggaagaaaagggatcaaaat 33105076  T
Q  350 atcatatttcccttatg 366  Q
    | |||||||| ||||||    
T  33105075 aacatatttctcttatg 33105059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 30478800 - 30478757
Alignment:
Q  18 caattttctataaatattatttttggcaatgaattaggtagttg 61  Q
    |||||||||||||||||| |||||| ||||||||||||||||||    
T  30478800 caattttctataaatattgtttttgacaatgaattaggtagttg 30478757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 36311148 - 36311201
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttgg 230  Q
    ||||| ||||||||||||| ||| ||||||||||| |||| |||||||||||||    
T  36311148 tttaggctaaactgcacttttcgtcccctaagttttaaaatgttgcgattttgg 36311201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 48860937 - 48860818
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaa--aaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    |||||||| ||  |||| || ||||||| || |||||| |||||||| ||| |  |||||| ||||||| |||| ||||||  ||||||||||| |||||    
T  48860937 caattttgaccattttcatcccaaaattactcagaagatgccacgtgcccccagaaaagggatcataatcgcaactttttgtaaagataaggggtcaaaa 48860838  T
Q  349 gatcatatttcccttatgtta 369  Q
     | ||||||||||||||||||    
T  48860837 -aacatatttcccttatgtta 48860818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 20626794 - 20626880
Alignment:
Q  253 attttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataa 338  Q
    ||||||||||||||||   |||||||| | |||||||||||| |||||| ||||||| |||||||| | || ||||||  |||||||    
T  20626794 attttggcccctttcgctccaaaattgttaagaagacgccacatgtcccaaaaaaggagtcataatcgtaactttttgtaaagataa 20626880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 820 - 913
Target Start/End: Complemental strand, 32076069 - 32075978
Alignment:
Q  820 tcatgttctttttgggttacaaatgtgtgttatgtatttaggctttgaaattgtctccaagtcttgttaaattcttcaatgaatccttttattt 913  Q
    ||||||||||||| ||||||||||| ||||| |  | ||||||||||||||| ||||| | || | ||| |||||| ||||||| |||||||||    
T  32076069 tcatgttctttttaggttacaaatg-gtgttttagaattaggctttgaaattatctcc-actccttttacattctttaatgaattcttttattt 32075978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 54987088 - 54987051
Alignment:
Q  201 cccctaagtttcaaaaagttgcgattttggtcctctat 238  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  54987088 cccctaagtttcaaaaagttgcgattttagtcccctat 54987051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 1e-44; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 181 - 381
Target Start/End: Complemental strand, 3208283 - 3208083
Alignment:
Q  181 gactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgc 280  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||| | |  ||||||       | ||||||||||| | ||||||| ||||||| |    
T  3208283 gactaaactgcacttttcgacccctaagttttaaaaagttgcgattttagcctcctatttaaaaaaataacaattttggctc-tttcgtcccaaaattac 3208185  T
Q  281 tgagaagacgccacgtgtcccaaaaag-gggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaa 379  Q
    ||||||||||||||||||||||||||  |||||||||| |||| ||||| ||||||||||||| ||||| |||||||||||||||||||| ||||| |||    
T  3208184 tgagaagacgccacgtgtcccaaaaaatgggtcataatcgcaactttttaagaagataaggggtcaaaatatcatatttcccttatgttaggggtcaaaa 3208085  T
Q  380 ga 381  Q
    ||    
T  3208084 ga 3208083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 255 - 375
Target Start/End: Original strand, 18252960 - 18253081
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| || || ||||||  ||| ||||||||||||||||||| ||||| ||||    
T  18252960 tttggcccctttcgtcccaaaattgctgagaagacgccacgtgtcccaaaacagtggccataatcacaactttttgagaagataaggggtcaaaaaatca 18253059  T
Q  354 tatttcccttatgttatgggtc 375  Q
    ||||||||||||||||||||||    
T  18253060 tatttcccttatgttatgggtc 18253081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 172 - 369
Target Start/End: Original strand, 18881495 - 18881692
Alignment:
Q  172 taaaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtct 271  Q
    ||||| |||| ||||||||| ||| ||||||| |||||||  ||| ||||||||||||| || |||||        || ||||||||||||| ||||||     
T  18881495 taaaaattaggctaaactgcgcttttcgacccttaagttttgaaatgttgcgattttggccccctatt-aaaaaaatggcaattttggcccccttcgtcc 18881593  T
Q  272 caaaattgctgagaagacgccacgtgtcccaaa-aaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||| ||||||||| ||| |||||||||| |||||||||||||||||| ||||||  ||||||||||| ||||||| | ||||||||||||||||    
T  18881594 caaaattgttgagaagacaccaagtgtcccaaataaggggtcataattgcaactttttgtaaagataaggggtcaaaagagcgtatttcccttatgtta 18881692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 249 - 381
Target Start/End: Complemental strand, 1824840 - 1824708
Alignment:
Q  249 gacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   || |||| | |||| ||||||||||||||||  |  ||||    
T  1824840 gacaattttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaacaaggccatactcgcaactttttgagaagataagaagttaaaa 1824741  T
Q  349 gatcatatttcccttatgttatgggtcgaaaga 381  Q
    |||||||||| |||||||||| ||||| |||||    
T  1824740 gatcatattttccttatgttaggggtcaaaaga 1824708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 249 - 381
Target Start/End: Complemental strand, 1859285 - 1859153
Alignment:
Q  249 gacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   || |||| | |||| ||||||||||||||||  |  ||||    
T  1859285 gacaattttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaacaaggccatactcgcaactttttgagaagataagaagttaaaa 1859186  T
Q  349 gatcatatttcccttatgttatgggtcgaaaga 381  Q
    |||||||||| |||||||||| ||||| |||||    
T  1859185 gatcatattttccttatgttaggggtcaaaaga 1859153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 38630289 - 38630171
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| |||||     
T  38630289 caattttggcccccttcatctcaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 38630191  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  38630190 agcatatttcccttatgtta 38630171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 250 - 372
Target Start/End: Original strand, 4423099 - 4423221
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||| ||| |||||| ||||||||||||||||| ||||| |||   ||||| |||||||||| |||| ||||||| ||||||||||| ||||||    
T  4423099 acaattttggtccccttcgtcccaaaattgctgagaagatgccacatgttaaaaaaaagggtcataatcgcaattttttgaaaagataaggggtcaaaag 4423198  T
Q  350 atcatatttcccttatgttatgg 372  Q
    |||||||||||||||||||||||    
T  4423199 atcatatttcccttatgttatgg 4423221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 19391390 - 19391575
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| |||||| ||||||||| ||||| |||||||||| |||||        |  ||||||||||||||||| ||  ||||||||||    
T  19391390 ctaaactgcacttttcg-cccctatgtttcaaaatgttgcaattttggtcccctattaaaaaaaatagcaattttggcccctttcatccaaaaattgctg 19391488  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| ||||||||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  19391489 agaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 19391575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 21666344 - 21666462
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||| |   ||||||||||| |||||     
T  21666344 caattttggcccccttcgtctcaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataattgcaactttatctaaagataaggggtcaaaa- 21666442  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  21666443 aacatatttcccttatgtta 21666462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 177 - 369
Target Start/End: Complemental strand, 33895681 - 33895490
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaa 276  Q
    ||||| ||||||||||||| ||| ||||||  ||| |||| ||||| |||||||||| |||||        |  ||||||||||||||||| ||  ||||    
T  33895681 tttaggctaaactgcacttttcgccccctatattttaaaatgttgcaattttggtcccctattaaaaaaaatagcaattttggcccctttcatccaaaaa 33895582  T
Q  277 ttgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    || ||||||||||||||||||||| ||||| ||| ||||||||||| ||||||  |||||||||||  |||| | ||||||||||||||||||    
T  33895581 tttctgagaagacgccacgtgtccaaaaaaagggccataattgcaactttttgtaaagataaggggttaaaa-aacatatttcccttatgtta 33895490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 252 - 369
Target Start/End: Complemental strand, 19924498 - 19924381
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    |||||||||||||||  ||  |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| ||||| |    
T  19924498 aattttggccccttttatcaaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-a 19924400  T
Q  351 tcatatttcccttatgtta 369  Q
     ||||||||||||||||||    
T  19924399 gcatatttcccttatgtta 19924381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 382 - 479
Target Start/End: Complemental strand, 2755591 - 2755495
Alignment:
Q  382 tcattaaggtaagatttcagtgtgcatatcttgccattattatctatgattgaatcatattattaatgttgtttctctgtattagactcgttgtaggg 479  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  ||||| | ||| |||||||| ||||||||    
T  2755591 tcattaaggtaagattttagtgtgcatatcttgccattattatatatgattgaatcatattattaattctgtttat-tgttttagactcattgtaggg 2755495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 184 - 369
Target Start/End: Original strand, 30784268 - 30784452
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctga 283  Q
    |||||| ||||| | | |||||| ||||||||| ||||| |||||||||| |||||        || ||||||||||||| ||| ||  |||||||||||    
T  30784268 taaacttcactttttgccccctaggtttcaaaatgttgcaattttggtcccctattaaaaaaaatggcaattttggccccattcatccaaaaattgctga 30784367  T
Q  284 gaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||| | ||||||||||||||| ||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  30784368 gaagaagtcacgtgtcccaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 30784452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 4518938 - 4519055
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||| ||||||  ||||||||||| |||||     
T  4518938 caattttggcccctt-catctcaaaattgttgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 4519035  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  4519036 aacatatttcccttatgtta 4519055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 5192341 - 5192459
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||||||| ||||||||| |||||| |||| ||||||  |||||||| || |||||     
T  5192341 caattttggccccttttatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagaggtcaaaa- 5192439  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  5192440 aacatatttcccttatgtta 5192459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 175 - 369
Target Start/End: Original strand, 8802394 - 8802587
Alignment:
Q  175 aatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaa 274  Q
    ||||||| ||||| ||||||| ||| ||| || |||| |||| ||||||||||||| || |||||        || ||||||||||||| ||| || |||    
T  8802394 aatttaggctaaagtgcacttttcgtcccgtatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaa 8802493  T
Q  275 aattgctgagaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||||||| || ||| ||||||||| |||||| |||| ||||||  ||||||||||| ||||| | | ||||||||||||||||    
T  8802494 aattgctgagaagacgccacatgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agc-tatttcccttatgtta 8802587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 187 - 364
Target Start/End: Original strand, 15869343 - 15869522
Alignment:
Q  187 actgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccc-tttcgtctcaaaattgctgaga 285  Q
    ||||||||| ||| || |||| ||| |||| |||||||||||||||| |||||        ||| |||||||||||| |||| |   |||||||||||||    
T  15869343 actgcacttttcgccctctaaattttaaaatgttgcgattttggtcccctattaaacaaaatgataattttggccccctttcattctaaaattgctgaga 15869442  T
Q  286 agacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttccctta 364  Q
    || ||||||||||||||||| |||||||||||| |||| |||||||||||| |   || |||||||||||||||| ||||    
T  15869443 agtcgccacgtgtcccaaaacaggggtcataatcgcaactttttgagaagacagatggtcaaaagatcatatttctctta 15869522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 250 - 381
Target Start/End: Original strand, 7117183 - 7117316
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    |||||||||||||||||||||  |||| ||||||||||||||||| |||||| ||||| ||| ||||||||||| ||||||  |||||||||||  ||||    
T  7117183 acaattttggcccctttcgtcctaaaactgctgagaagacgccacatgtcccaaaaaaagggccataattgcaactttttgtaaagataaggggttaaaa 7117282  T
Q  349 gatcatatttcccttatgtta-tgggtcgaaaga 381  Q
    || || ||| ||||| ||||| |||||| |||||    
T  7117283 gaacacattccccttctgttagtgggtcaaaaga 7117316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 177 - 369
Target Start/End: Complemental strand, 44147278 - 44147087
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaa 276  Q
    ||||| ||||| ||||||| ||| ||| || |||||||||  |||||||||||| || |||||        |||||||||||||| | ||  || |||||    
T  44147278 tttaggctaaagtgcacttttcgccccatatgtttcaaaatattgcgattttggccccctattaaaaaaaatgacaattttggcctcctttatcccaaaa 44147179  T
Q  277 ttgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||| || |||| |||||||||||||||| ||||  |||||  ||||||||||| ||||| | ||||||||||||||||||    
T  44147178 ttgctgagaagacgccatgtatcccaaaaaaggggtcataatcgcaa-cttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 44147087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 17648473 - 17648359
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    ||||||||||||| ||  |||||||||||||||| ||||||||||| ||||| |||| |||||| |||| ||||||  ||||||||||| ||||| | ||    
T  17648473 tttggcccctttcatccaaaaattgctgagaagaggccacgtgtcctaaaaagggggccataatcgcaactttttgtaaagataaggggtcaaaa-agca 17648375  T
Q  354 tatttcccttatgtta 369  Q
    ||||||||||||||||    
T  17648374 tatttcccttatgtta 17648359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 4807602 - 4807788
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| | |||| ||||||||| ||||| ||||||| || |||||        |  |||||||||| | |||| ||  |||||| |||    
T  4807602 ctaaactgcacttttcgcctcctatgtttcaaaatgttgcaattttggccccctattaaaaaaaatagcaattttggcacatttcatccaaaaattactg 4807701  T
Q  283 agaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||| ||| ||||||||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  4807702 agaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 4807788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 22452244 - 22452361
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| |||  ||| | |||| ||||||  |||||||| || ||||| |    
T  22452244 aattttggcccatttcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaaagggctatattcgcaactttttgtaaagataagaggtcaaaa-a 22452342  T
Q  351 tcatatttcccttatgtta 369  Q
     ||||||||||||||||||    
T  22452343 gcatatttcccttatgtta 22452361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 273 - 369
Target Start/End: Original strand, 41688202 - 41688299
Alignment:
Q  273 aaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||| | ||||||||||||| | |||||||||| |||| ||||||||||||||||||| ||||| |||| ||||  |||||||||    
T  41688202 aaaattgctgagaagacactacgtgtcccaaaacatgggtcataatcgcaactttttgagaagataaggggtcaaaatatcagatttttcttatgtta 41688299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 12723331 - 12723449
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| |   ||||||||||||||||||||| ||||||| ||||||||  |||||| |||| ||||||  ||||||| ||| |||||     
T  12723331 caattttggcccctttcatgcaaaaattgctgagaagacgccatgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataacgggtcaaaa- 12723429  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  12723430 aacatatttcccttatgtta 12723449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 176 - 307
Target Start/End: Original strand, 21929842 - 21929973
Alignment:
Q  176 atttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaa 275  Q
    |||||| ||||| |||| || ||| |||||| ||||||||| |||||||||||||  | |||||        |  ||||||||||||| ||| || ||||    
T  21929842 atttaggctaaagtgcatttttcgccccctatgtttcaaaacgttgcgattttggctccctattaaaaaaaattgcaattttggcccccttcatcccaaa 21929941  T
Q  276 attgctgagaagacgccacgtgtcccaaaaag 307  Q
    ||||||||||||||||||||||||||||||||    
T  21929942 attgctgagaagacgccacgtgtcccaaaaag 21929973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 272 - 369
Target Start/End: Original strand, 32400413 - 32400510
Alignment:
Q  272 caaaattgctgagaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||  |||||||  || ||||||  ||||||||||||||||||    
T  32400413 caaaattgctgagaagacaccacgtgttccaaaaaaggggtcataattgcaactttttgtaaagataaatggtcaaaag-gcatatttcccttatgtta 32400510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 770 - 876
Target Start/End: Original strand, 43720518 - 43720624
Alignment:
Q  770 ttcttattttacatgtttgatcgaatgcctcat-ggattt-acttttacaaatcatgttctttttgggttacaaatgtgtgttatgtatttaggctttga 867  Q
    ||||| ||||||||||||||| ||||||||||| |||||| |||||||||| ||||  |||| |||||||||||||||| ||| |  ||||||||||||     
T  43720518 ttcttcttttacatgtttgattgaatgcctcattggattttacttttacaactcat--tcttcttgggttacaaatgtgagttctagatttaggctttgg 43720615  T
Q  868 aattgtctc 876  Q
    |||||||||    
T  43720616 aattgtctc 43720624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 373
Target Start/End: Complemental strand, 31268514 - 31268390
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa--ggggtcataattgcaagtttttgagaagataaggggccaaa 347  Q
    |||||||||||||||||||||  ||||||||| |||||||||| | |||||||||||  ||| |||||||  ||| |||||   ||||||| ||| | ||    
T  31268514 acaattttggcccctttcgtcctaaaattgctaagaagacgccgcatgtcccaaaaaaggggatcataatcacaactttttataaagataaagggtctaa 31268415  T
Q  348 agatcatatttcccttatgttatggg 373  Q
    ||| |||| |||||||||||||||||    
T  31268414 agagcata-ttcccttatgttatggg 31268390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 260 - 369
Target Start/End: Original strand, 41385569 - 41385679
Alignment:
Q  260 cccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatattt 358  Q
    ||||||| |||  ||||||  |||||| |||||||||||||||| | ||| | ||||||  ||| ||||||||| ||||||||| ||||| |||||||||    
T  41385569 ccccttttgtcctaaaattattgagaatacgccacgtgtcccaagacaggtgccataatcacaactttttgagatgataaggggtcaaaaaatcatattt 41385668  T
Q  359 cccttatgtta 369  Q
    |||||||||||    
T  41385669 cccttatgtta 41385679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 248 - 348
Target Start/End: Complemental strand, 23565326 - 23565225
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||| || |   ||||| ||| |||||| |||| ||||||  ||||||||||| |||    
T  23565326 tgacaattttggcccctttcatccaaaaattgctgagaagacgccacatgtttaaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaa 23565227  T
Q  347 aa 348  Q
    ||    
T  23565226 aa 23565225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 426 - 498
Target Start/End: Complemental strand, 2747499 - 2747424
Alignment:
Q  426 tatgattgaatcatattattaatgttgtttctctgtattagactcgttgtaggg---attcaaagtttaattttca 498  Q
    |||||||||| |||||||||||| |||||| ||| | |||||||| ||||||||   || ||||||||||||||||    
T  2747499 tatgattgaaccatattattaattttgtttttctattttagactcattgtaggggaaatccaaagtttaattttca 2747424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 820 - 913
Target Start/End: Original strand, 14836949 - 14837040
Alignment:
Q  820 tcatgttctttttgggttacaaatgtgtgttatgtatttaggctttgaaattgtctccaagtcttgttaaattcttcaatgaatccttttattt 913  Q
    |||||||||||||||||| ||||||| |||| |  | ||||||||| ||||||||||| | || | ||| |||||||||||||| |||||||||    
T  14836949 tcatgttctttttgggtttcaaatgt-tgttttagaattaggctttaaaattgtctcc-actccttttacattcttcaatgaattcttttattt 14837040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 358
Target Start/End: Original strand, 17857061 - 17857110
Alignment:
Q  309 ggtcataattgcaagtttttgagaagataaggggccaaaagatcatattt 358  Q
    |||||||||  ||| ||||||||||||||||||| |||||||||||||||    
T  17857061 ggtcataatcacaactttttgagaagataaggggtcaaaagatcatattt 17857110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 5192572 - 5192517
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||||| ||||| ||| || |||||||| |||| ||||||||||||||||||||||    
T  5192572 taaacttcacttttcgccctctaagttttaaaatgttgcgattttggtcctctatt 5192517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 16233671 - 16233581
Alignment:
Q  272 caaaattgctgagaagacgccacgtgtcccaaaaa--ggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcc 360  Q
    |||| |||||||||||||  ||||||||||||||   |||| ||||||||||| ||||||  |||||||| || | ||||| |||||||||    
T  16233671 caaagttgctgagaagacatcacgtgtcccaaaacagggggccataattgcaactttttgtaaagataagagggcgaaagagcatatttcc 16233581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 8137721 - 8137635
Alignment:
Q  278 tgctgagaagacgccacgtgtcccaaaaaggg-gtcataattgcaagt-ttttgagaagataaggggccaaaagatcatatttccct 362  Q
    |||||||||| ||| ||||||| ||||||  | | ||||||||||| | ||||| |||||||||||| ||||||| |||||||||||    
T  8137721 tgctgagaagccgcaacgtgtctcaaaaaatgagccataattgcaactattttgcgaagataagggggcaaaagagcatatttccct 8137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 229
Target Start/End: Original strand, 4423048 - 4423077
Alignment:
Q  200 acccctaagtttcaaaaagttgcgattttg 229  Q
    ||||||||||||||||||||||||||||||    
T  4423048 acccctaagtttcaaaaagttgcgattttg 4423077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 7117426 - 7117369
Alignment:
Q  172 taaaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttg 229  Q
    |||| ||||| ||||||||||||| ||  | | |||||||||||||||||||||||||    
T  7117426 taaattttaggctaaactgcacttatcaccacttaagtttcaaaaagttgcgattttg 7117369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 19392873 - 19392812
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||| ||||||| ||||| ||| || ||||||||||||| ||||||||||||| || |||||    
T  19392873 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 19392812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 943 - 1000
Target Start/End: Original strand, 43720697 - 43720754
Alignment:
Q  943 tatgcaagggattgagaagagataaaacatggctcttgattttgttttatttatctgg 1000  Q
    |||||||| |||||||||||||||||| ||||  ||||| ||| |||| |||||||||    
T  43720697 tatgcaagagattgagaagagataaaatatggaccttgaatttattttctttatctgg 43720754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 88; Significance: 9e-42; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 455330 - 455142
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntg-acaattttggcccctttcgtctcaaaattgct 281  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||| || |||||        |  ||||||| |||||||||| || ||||||||||    
T  455330 ctaaactgcacttttcgaaccctaagtttcaaaatgttgcgattttggccccctattaatttttttttacaatttcggcccctttcatcccaaaattgct 455231  T
Q  282 gagaagacgccacgtgtcccaaaaag-gggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||| |||||||||||  |||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||||    
T  455230 gagaagacgccacatgtcccaaaaaatgggtcataatcgcaacttttagagaagataaggggtcaaaagatcatatttcccttatgtta 455142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 455108 - 455046
Alignment:
Q  307 ggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||   || |||| |||||||||||||| ||||||||| ||||||| ||||||||    
T  455108 ggggtcataatcaaaacttttagagaagataaggggtcaaaagatcgtatttcctttatgtta 455046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 4e-41; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 4098958 - 4098772
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| | |||| |||||||| |||| ||||||||||||| ||||||||        | | |||| |||||||||||||| ||||||||  |    
T  4098958 ctaaactgcactttttgacctctaagttttaaaatgttgcgattttggccctctattaaaaaattt-ataattatggcccctttcgtcccaaaattgacg 4098860  T
Q  283 agaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||||||||||| |||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  4098859 agaagacgccacgtgtcccaaaaaaggggccttaattgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta 4098772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 250 - 375
Target Start/End: Original strand, 6209308 - 6209436
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa---ggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||   | || |||| |||||| ||||||||||||||||||| ||     
T  6209308 acaattttggcccctttcgttccaaaattgctgagaagacaccacgtgtcccaaaaaaaggtggccatagttgcaactttttgagaagataaggggtcat 6209407  T
Q  347 aagatcatatttcccttatgttatgggtc 375  Q
    |||||||| |||||||||||||| |||||    
T  6209408 aagatcatttttcccttatgttaggggtc 6209436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 43793633 - 43793819
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| |||||| |||| |||| ||||||||||||| || |||||        || |||||||||||| ||||||| |||||||||||    
T  43793633 ctaaactgcacttttcgccccctatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccatttcgtcccaaaattgctg 43793732  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||| |||||| |||||||||||||| | |||| ||||||  || |||||||| ||||| | ||||||||||||||||||    
T  43793733 agaagacgccacatgtcccaaaaaaggggtcatattcgcaactttttgtaaatataaggggtcaaaa-aacatatttcccttatgtta 43793819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 51291240 - 51291358
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    |||||| |||| ||||||| |||||||| |||||||||||||| ||||||||||| |||| ||||||  ||| ||||||||||||||||||| |||||||    
T  51291240 aatttttgcccatttcgtcacaaaattggtgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgagaagataaggggtcaaaaga 51291339  T
Q  351 tcatatttcccttatgtta 369  Q
    |||||||||||||||||||    
T  51291340 tcatatttcccttatgtta 51291358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 184 - 369
Target Start/End: Complemental strand, 27018516 - 27018330
Alignment:
Q  184 taaactgcacttctcgacccc-taagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    |||||||||||||||| |||| || ||||||||| ||||||||||||  || |||||        || |||||||||||| |||| || |||||||||||    
T  27018516 taaactgcacttctcgcccccctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttggcccatttcatcccaaaattgctg 27018417  T
Q  283 agaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||||||| |||||||| ||||||||||| ||||||  | ||||||||| ||||| | |||||||||||| |||||    
T  27018416 agaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaa-aacatatttcccttttgtta 27018330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 13826489 - 13826607
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||  ||||| |||| ||||||  ||||||||||| |||||     
T  13826489 caattttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaa- 13826587  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  13826588 agcatatttcccttatgtta 13826607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 183 - 358
Target Start/End: Original strand, 20919337 - 20919511
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| ||       | |||||||||||   ||||||| |||||||||||    
T  20919337 ctaaactgcacttttcgacccctaagtttcaaaatgttgcgattttggttctcta-ttaaaaaaattacaattttggctagtttcgtcccaaaattgctg 20919435  T
Q  283 agaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatattt 358  Q
    |||||||| ||| |||||||||| |||| |||||||  |||  |||||||||||||||||| |  ||||||||||||    
T  20919436 agaagacgtcacatgtcccaaaagagggatcataatcacaa-cttttgagaagataaggggtcctaagatcatattt 20919511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 248 - 370
Target Start/End: Original strand, 24626287 - 24626410
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    ||||| |||||||||| |||||| |||||||| | ||||||| |||| |||||||||| | ||||||||||  ||| ||||||||||||||||| | |||    
T  24626287 tgacatttttggccccattcgtcccaaaattgttaagaagacaccacatgtcccaaaacatgggtcataatcacaactttttgagaagataaggagtcaa 24626386  T
Q  347 aagatcatatttcccttatgttat 370  Q
    ||||||||||||||||||||||||    
T  24626387 aagatcatatttcccttatgttat 24626410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 251 - 362
Target Start/End: Original strand, 25618698 - 25618809
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    ||||||||| ||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||| || | ||||||  ||||||||||| |||||||    
T  25618698 caattttggtccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaggggccataatcgccactttttgtaaagataaggggtcaaaaga 25618797  T
Q  351 tcatatttccct 362  Q
     |||||||||||    
T  25618798 gcatatttccct 25618809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 252 - 362
Target Start/End: Original strand, 36729159 - 36729270
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    |||||||||||||||| || ||||||| ||||||||||||||| |||||| |||||  ||||||||| | || ||||||||||||||||||| |||||||    
T  36729159 aattttggcccctttcatcccaaaattactgagaagacgccacatgtcccaaaaaaaaggtcataatcgaaactttttgagaagataaggggtcaaaaga 36729258  T
Q  351 tcatatttccct 362  Q
    ||||||||||||    
T  36729259 tcatatttccct 36729270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 5304349 - 5304535
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||| |||||| ||||||||| |||  |||||||| ||||||||        || ||||||||||||| ||| || |||||||||||    
T  5304349 ctaaagtgcacttttcgccccctatgtttcaaaatgttttgattttggccctctattaaaaaaaatggcaattttggcccccttcatcgcaaaattgctg 5304448  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| ||||| ||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||| ||||||||||    
T  5304449 agaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatattttccttatgtta 5304535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 35475526 - 35475405
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||||||||||||| ||||||||||||||| || | ||||||  ||||||||||| |||    
T  35475526 tgacaattttggcccatttcatcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgctactttttgtaaagataaggggtcaa 35475427  T
Q  347 aagatcatatttcccttatgtta 369  Q
    || | ||||||||||||||||||    
T  35475426 aa-aacatatttcccttatgtta 35475405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 13397745 - 13397863
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||| ||| ||  ||||||||||||||||||||||||||||| ||||||||| |||||| |||| ||||||  ||||||||||| |||||     
T  13397745 caattttggcccccttcatccgaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 13397843  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  13397844 agcatatttcccttatgtta 13397863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 15058892 - 15059006
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    ||||||||||||| || |||||||||||||||||||||||||||||| |||||||||  ||||| |||| ||||||  ||||||||||| ||||| | ||    
T  15058892 tttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaa-agca 15058990  T
Q  354 tatttcccttatgtta 369  Q
    ||||||||||||||||    
T  15058991 tatttcccttatgtta 15059006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 19232413 - 19232532
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| || |||||||||| |||||| ||||||||||||| ||||||||||||||| |||| ||||||  |||||||||||  ||||     
T  19232413 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtaaaaaa 19232512  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||| ||||||||||    
T  19232513 aacatattttccttatgtta 19232532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 251 - 381
Target Start/End: Original strand, 1588484 - 1588613
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    |||||||||||| |||| |  ||||| |||| |||||||| |||||||||||||||| ||  ||||| |||| ||||||  ||||||||||| ||||| |    
T  1588484 caattttggcccttttctttccaaaactgctaagaagacgtcacgtgtcccaaaaagaggctataatcgcaactttttgtaaagataaggggtcaaaa-a 1588582  T
Q  351 tcatatttcccttatgttatgggtcgaaaga 381  Q
     |||||||||||||||||| ||||| |||||    
T  1588583 acatatttcccttatgttaggggtcaaaaga 1588613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 4357486 - 4357368
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||| ||| |   ||||||||||||||||||||| |||||||| |||| ||| |||||| |||| ||||||  ||||||||||| |||||     
T  4357486 caattttggcccccttcattctaaaattgctgagaagacgccaggtgtcccaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaa- 4357388  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  4357387 agcatatttcccttatgtta 4357368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 41877099 - 41877214
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcc-caaaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    |||||||||||||||| ||  ||||||||||| ||||||||||||||||  |||||||||||||||| ||||   ||||  ||||||||||| ||||| |    
T  41877099 aattttggcccctttcatcaaaaaattgctgaaaagacgccacgtgtcctaaaaaaggggtcataatcgcaa--ctttgtaaagataaggggtcaaaa-a 41877195  T
Q  351 tcatatttcccttatgtta 369  Q
     ||||||||||||||||||    
T  41877196 gcatatttcccttatgtta 41877214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 45633670 - 45633553
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaag-gggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||||||| ||| |||||||| |||||| ||||||||||||| |||||  ||||||||||  ||| ||||| | ||||||||||| ||||||    
T  45633670 caattttggccccttttgtcccaaaattgttgagaa-acgccacgtgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaag 45633572  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||| ||||||||||    
T  45633571 agcatattt-ccttatgtta 45633553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 272 - 385
Target Start/End: Original strand, 2715808 - 2715921
Alignment:
Q  272 caaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttat 370  Q
    |||||| | ||||||||||||||||||||| ||||| ||| |||||| |||| ||||||  ||||||||||| ||||| | |||||||||| |||||||     
T  2715808 caaaatggatgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccatatgttag 2715906  T
Q  371 gggtcgaaagatcat 385  Q
    ||||| |||||||||    
T  2715907 gggtcaaaagatcat 2715921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 183 - 306
Target Start/End: Original strand, 13394538 - 13394661
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||| |||||| |||| |||| ||||||||||| | || |||||        |||||||||||||||| ||| ||  ||||||||||    
T  13394538 ctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttagccccctattaaaaaaaatgacaattttggcccccttcatccgaaaattgctg 13394637  T
Q  283 agaagacgccacgtgtcccaaaaa 306  Q
    ||||||||||||||||||||||||    
T  13394638 agaagacgccacgtgtcccaaaaa 13394661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 770 - 1000
Target Start/End: Original strand, 28021944 - 28022180
Alignment:
Q  770 ttcttattttacatgtttgatcgaatgcctcat-ggattt-acttttacaaatcatgttctttttgggttacaaatgtgtgttatgtatttaggctttga 867  Q
    ||||| ||||||||||||||| ||||||||||| |||||| |||||||||| ||||  |||| ||||||||||||||||  || |  ||||||||||||     
T  28021944 ttcttcttttacatgtttgattgaatgcctcattggattttacttttacaactcat--tcttcttgggttacaaatgtgaattctagatttaggctttgg 28022041  T
Q  868 aattgtctccaagtcttgttaaattcttcaatgaatccttttatt--------taagttgtgaattcaattctctaacaccattatgcaagggattgaga 959  Q
    ||||||||| |  ||  |||| |||||||||||||| ||||| ||        || ||| ||||||||| | || | ||| | |||||||| ||||||||    
T  28022042 aattgtctcaatttcc-gttacattcttcaatgaattcttttcttttattcagtaggttctgaattcaactttc-agcactactatgcaagagattgaga 28022139  T
Q  960 agagataaaacatggctcttgattttgttttatttatctgg 1000  Q
    |||||||||| ||||  ||||| ||| |||| |||||||||    
T  28022140 agagataaaatatggaccttgaatttattttctttatctgg 28022180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 25011969 - 25011851
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| |  |||||||||| |||||| ||||||||||||| ||||||| |||||||  ||| ||||||  ||||||||||| |||||     
T  25011969 caattttggcccctttcattccaaaattgctcagaagatgccacgtgtcccaaaaaagggatcataatcccaactttttgtaaagataaggggtcaaaa- 25011871  T
Q  350 atcatatttcccttatgtta 369  Q
    | |||||  |||||||||||    
T  25011870 aacatatcccccttatgtta 25011851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 6789028 - 6789126
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    ||||||||||||| ||| || |||||||||| ||||||||||||||||||| ||||| ||| |||||| |||| ||||||  ||||||| ||| |||||    
T  6789028 caattttggcccccttcatcccaaaattgctaagaagacgccacgtgtcccaaaaaaaggggcataatcgcaattttttgtaaagataacgggtcaaaa 6789126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 303 - 381
Target Start/End: Original strand, 9195787 - 9195864
Alignment:
Q  303 aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaaga 381  Q
    ||||||||||||||| |||| ||||||  ||||||||||| ||||| | |||||||||||||||||||||||| |||||    
T  9195787 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgttatgggtcaaaaga 9195864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 385
Target Start/End: Complemental strand, 41034868 - 41034735
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtc-ataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  |||||| | ||||||||||||||||| ||||||| ||| | ||||| |||| ||||||  || |||||||| |||||     
T  41034868 caattttggcccctttcatc--aaaattaccgagaagacgccacgtgttccaaaaaagggactataatcgcaactttttgtaaaaataaggggtcaaaa- 41034772  T
Q  350 atcatatttcccttatgttatg-ggtcgaaagatcat 385  Q
    | |||||||||||||||||| | |||| |||||||||    
T  41034771 agcatatttcccttatgttaggaggtcaaaagatcat 41034735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 328
Target Start/End: Complemental strand, 47869888 - 47869811
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagttttt 328  Q
    ||||| ||||| | ||| || ||||||||||||||||||||||||||| ||||||| |||||||||| |||| |||||    
T  47869888 caattctggcctccttcatcccaaaattgctgagaagacgccacgtgttccaaaaaagggtcataatcgcaacttttt 47869811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 362
Target Start/End: Complemental strand, 14804553 - 14804441
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtc-ccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||| ||||||||||||||||| |||||| |||||| ||||| | ||||||   |||||||  |||||||||   ||||||||||| ||||||    
T  14804553 caattttggcctctttcgtctcaaaattgttgagaaaacgccatgtgtctcaaaaaagatatcataatcacaagtttttctaaagataaggggtcaaaag 14804454  T
Q  350 atcatatttccct 362  Q
    |  ||||||||||    
T  14804453 agtatatttccct 14804441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 9397421 - 9397307
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcat 354  Q
    |||||||||||| ||| |||||||| |||||| ||| ||||||||| |||||  |||||||||  ||| ||||||  ||||||| |||  |||| | |||    
T  9397421 tttggcccctttagtcccaaaattgttgagaacacggcacgtgtccgaaaaaaaggtcataatgacaactttttgtaaagataaagggttaaaaaaacat 9397322  T
Q  355 atttcccttatgtta 369  Q
    |||||| ||||||||    
T  9397321 atttcctttatgtta 9397307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 253 - 369
Target Start/End: Complemental strand, 15795549 - 15795433
Alignment:
Q  253 attttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcc-caaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagat 351  Q
    ||||| ||| |||||||| |||||||| |||||||||||||| |||||  ||||| ||||||||||  ||| ||||||| |||||||  || ||||| |     
T  15795549 attttagcctctttcgtcccaaaattgatgagaagacgccacatgtcctaaaaaatgggtcataatcccaactttttgaaaagataaaaggtcaaaa-ag 15795451  T
Q  352 catatttcccttatgtta 369  Q
    | ||||||||||||||||    
T  15795450 cctatttcccttatgtta 15795433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 371
Target Start/End: Complemental strand, 2931553 - 2931435
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    |||||||||||||||| ||  |||||  |||||||||||||||| |||| ||||| |||| || ||| |||| ||||||  ||||||||||| ||||| |    
T  2931553 aattttggcccctttcatccaaaaatgtctgagaagacgccacg-gtccaaaaaacggggccacaatcgcaattttttgtaaagataaggggtcaaaa-a 2931456  T
Q  351 tcatatttcccttatgttatg 371  Q
     ||||||||| ||||||||||    
T  2931455 gcatatttcctttatgttatg 2931435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 4433253 - 4433371
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||| ||  |||| || |||||||||| | |||| ||||||||||| | |||||||||||||||  ||| ||||||  ||||||||||| |||||     
T  4433253 caattttgacctatttcatcccaaaattgctcataagatgccacgtgtcctagaaaaggggtcataatcacaactttttgtaaagataaggggtcaaaa- 4433351  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||| ||||||||||    
T  4433352 aacatattttccttatgtta 4433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 52838463 - 52838344
Alignment:
Q  251 caattttggcccctttcgtctcaaaat--tgctgagaagacgccacgtgtc-ccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaa 347  Q
    ||||||||||||||||| ||  |||||  ||||||||||||| |||||||| | ||||||||  |||||| |||| ||||||  |||||||||| | |||    
T  52838463 caattttggcccctttcatcaaaaaatattgctgagaagacgacacgtgtctcaaaaaagggaccataatcgcaactttttgtaaagataagggtcaaaa 52838364  T
Q  348 agatcatatttcccttatgtta 369  Q
    ||  |||||||||| |||||||    
T  52838363 ag--catatttcccgtatgtta 52838344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 10448368 - 10448314
Alignment:
Q  174 aaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgatttt 228  Q
    |||||||| ||||| |||||||| |  ||||||||||||||||||||||||||||    
T  10448368 aaatttaggctaaagtgcacttcccctcccctaagtttcaaaaagttgcgatttt 10448314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 381
Target Start/End: Complemental strand, 55780586 - 55780490
Alignment:
Q  285 aagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaaga 381  Q
    |||| ||||||||||| | ||||||||||||||| |||| ||||||  ||||||||||| ||||| | ||||||| ||||| |||| ||||| |||||    
T  55780586 aagatgccacgtgtcctagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatattttccttaggttaggggtcaaaaga 55780490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 381
Target Start/End: Complemental strand, 55844766 - 55844670
Alignment:
Q  285 aagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaaga 381  Q
    |||| ||||||||||| | ||||||||||||||| |||| ||||||  ||||||||||| ||||| | ||||||| ||||| |||| ||||| |||||    
T  55844766 aagatgccacgtgtcctagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatattttccttaggttaggggtcaaaaga 55844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 25011737 - 25011793
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    ||||||| ||||| ||| |||||||||||||||| ||||||||||||| || |||||    
T  25011737 ctaaactccacttttcgtcccctaagtttcaaaatgttgcgattttggccccctatt 25011793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 6209542 - 6209487
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||| ||||||| | ||||||||||||| |||| |||||||||||||||| |||||    
T  6209542 taaattgcacttttagacccctaagttttaaaatgttgcgattttggtcccctatt 6209487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 32336032 - 32335946
Alignment:
Q  278 tgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaa-gtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    |||||||||| |||||||||| || |||||||||||||||| ||||  ||||||  |||||||  |||||||||| ||||| |||||    
T  32336032 tgctgagaagccgccacgtgttccgaaaaaggggtcataatcgcaatttttttgtaaagataataggccaaaagagcatatatccct 32335946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 5304652 - 5304591
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||| ||||||| ||||| ||| || ||||||||||||| ||||||||||||  ||||||||    
T  5304652 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccctctatt 5304591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 9195969 - 9195908
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||| ||||||  ||||| ||| ||||||| |||||||| |||||||||||||||| |||||    
T  9195969 ttaggctaaacaccacttttcgccccctaaatttcaaaatgttgcgattttggtcccctatt 9195908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 290 - 362
Target Start/End: Original strand, 14784668 - 14784741
Alignment:
Q  290 gccacgtgtcccaaaaaggggtcataattgc-aagtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    ||||||||||||||||| ||| || |||||| || ||||||  ||||||||||| ||||| | |||||||||||    
T  14784668 gccacgtgtcccaaaaaagggccaaaattgcaaattttttgtaaagataaggggtcaaaaaaacatatttccct 14784741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 369
Target Start/End: Complemental strand, 23362635 - 23362547
Alignment:
Q  281 tgagaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||| | |||||||||||| ||||||||||| |||| ||||||  |||||||| | | |||| | ||||||| ||||||||||    
T  23362635 tgagaagacgcaatgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataagagactaaaa-agcatattttccttatgtta 23362547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 41877332 - 41877279
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttgg 230  Q
    ||||| ||||||| ||||| ||| || ||||||||||||| |||||||||||||    
T  41877332 tttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgg 41877279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 80; Significance: 6e-37; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 251 - 381
Target Start/End: Complemental strand, 29950 - 29819
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||||||||||| |||||||||||||||||||||||  || |||||  || || ||||||||||| ||||||||||||||||||| ||||||    
T  29950 caattttggcccctttcgtcccaaaattgctgagaagacgccacaggttccaaatcagaggccataattgcaactttttgagaagataaggggtcaaaag 29851  T
Q  350 atcatatttcccttatgttatgggtcgaaaga 381  Q
    |||||||||||||||||||| ||||| |||||    
T  29850 atcatatttcccttatgttaggggtccaaaga 29819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 9e-36; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 253 - 381
Target Start/End: Original strand, 29182072 - 29182201
Alignment:
Q  253 attttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaag-gggtcataattgcaagtttttgagaagataaggggccaaaagat 351  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||  ||| |||||| |||| ||| ||||||||||||||| ||||||||    
T  29182072 attttggcctctttcgtctcaaaattgctgagaagacgcaacgtgtctcaaaaaatgggccataatcgcaactttatgagaagataaggggtcaaaagat 29182171  T
Q  352 catatttcccttatgttatgggtcgaaaga 381  Q
    |||||||||||||||||| ||||| |||||    
T  29182172 catatttcccttatgttaggggtcaaaaga 29182201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 183 - 381
Target Start/End: Original strand, 43706656 - 43706854
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| |||||| |||||| || ||||||||||||| || |||||        |  ||||||||||||||||| || ||||||||||     
T  43706656 ctaaactgcacttttcgccccctatgtttcataatgttgcgattttggccccctattaaaaaaaatagcaattttggcccctttcatcccaaaattgctc 43706755  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaaga 381  Q
    |||||| ||||||||||||  ||||||||||||||| |||| ||||||  ||||||||||| ||||| | |||||||||||||||||||||||| |||||    
T  43706756 agaagatgccacgtgtcccggaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgttatgggtcaaaaga 43706854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 252 - 358
Target Start/End: Original strand, 16551714 - 16551821
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||| |||||| |||| ||||||||||||||||||| |||||||    
T  16551714 aattttggcacctttcgtcccaaaattgctgagaagacgccacgtgtcccaaaacaagggccataatcgcaactttttgagaagataaggggtcaaaaga 16551813  T
Q  351 tcatattt 358  Q
    ||||||||    
T  16551814 tcatattt 16551821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 178 - 369
Target Start/End: Complemental strand, 16972157 - 16971966
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaat 277  Q
    |||| ||||||||||||| ||| ||||||||||| |||| ||||||||||| | || |||||        ||||||||||||||| ||||||  ||||||    
T  16972157 ttaggctaaactgcacttttcgccccctaagttttaaaatgttgcgattttagccccctatt-aaaaaaatgacaattttggcccatttcgttccaaaat 16972059  T
Q  278 tgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||| |||| |||||| ||||||||||| |||||||||||| ||||  |||||||||||||| | | |||||| |||||||||||||||||||    
T  16972058 tgctaagaaaacgccatgtgtcccaaaataggggtcataatcgcaatattttgagaagataaagagtcaaaaggtcatatttcccttatgtta 16971966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 250 - 381
Target Start/End: Complemental strand, 21185438 - 21185308
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| | |||||||||||||||||| |||| ||||| ||||||| |||||||||| |||| |||||||||||||| |||| ||||||    
T  21185438 acaattttggccccttttggctcaaaattgctgagaagccgcctcgtgttccaaaaaagggtcataatcgcaactttttgagaagatagggggtcaaaag 21185339  T
Q  350 atcatatttcccttatgttatgggtcgaaaga 381  Q
    |||||||||  ||||||||| ||||| |||||    
T  21185338 atcatattt-tcttatgttaagggtcaaaaga 21185308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 24196563 - 24196377
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| | |||| |||| |||| ||||||||||||| || |||||        || ||||||||||||||||||||  ||||||||||    
T  24196563 ctaaactgcacttttcgcctcctatgttttaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccctttcgtccaaaaattgctg 24196464  T
Q  283 agaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||||||| |||||||| |||| | |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  24196463 agaagacgccacgtgtcccaaaaaaggggccatattcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 24196377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 252 - 369
Target Start/End: Complemental strand, 22786260 - 22786145
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |   ||| ||||||||||||||||||| |||||||    
T  22786260 aattttggcccatttcgtctcaaaattgctgagaagacgccaagtgtcccaaaacaggggccatca---caactttttgagaagataaggggtcaaaaga 22786164  T
Q  351 tcatatttcccttatgtta 369  Q
    ||||||||| |||||||||    
T  22786163 tcatatttcacttatgtta 22786145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 19077995 - 19078113
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||  ||||||||||| |||||     
T  19077995 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 19078093  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  19078094 aacatatttcccttatgtta 19078113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 19125885 - 19126003
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||  ||||||||||| |||||     
T  19125885 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 19125983  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  19125984 aacatatttcccttatgtta 19126003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 177 - 348
Target Start/End: Original strand, 27092849 - 27093020
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaa 276  Q
    ||||| ||||||||||||||||| |||||| ||||||||| ||| ||||||||| || |||||        || |||||||||||| |||| || |||||    
T  27092849 tttaggctaaactgcacttctcgccccctatgtttcaaaatgttacgattttggccc-ctattaaaaaaaatggcaattttggcccatttcatcccaaaa 27092947  T
Q  277 ttgctgagaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||  ||||||||||| |||||    
T  27092948 ttgctgagaagacgccacgtgttccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa 27093020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 183 - 373
Target Start/End: Original strand, 2260380 - 2260571
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||||||| ||||||| |||| |||||||||||||| |  ||||        | |||||||||| || ||||||   |||||| |||    
T  2260380 ctaaagtgcacttttcgacccttaagttttaaaatgttgcgattttggttccttattaaaaaaaattacaattttggtccatttcgttctaaaattactg 2260479  T
Q  283 agaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatggg 373  Q
    |||||||||||||| |||||||| |||||||| ||| |||| |||||||||||||||||||  |||| |||||||||||||||| |||||||    
T  2260480 agaagacgccacgtatcccaaaaaaggggtcagaatcgcaactttttgagaagataaggggttaaaatatcatatttcccttatattatggg 2260571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 48471865 - 48472051
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||| |||||| ||||||||| ||||||||||||| || |||||        || ||||||||||||| ||| || |||||||||||    
T  48471865 ctaaagtgcacttttcgtcccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgctg 48471964  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| ||||||||  |||||| |||| ||||||  ||||||||||| ||||| | |||||||| |||||||||    
T  48471965 agaagacgccacgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttctcttatgtta 48472051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 731 - 850
Target Start/End: Original strand, 19789726 - 19789846
Alignment:
Q  731 attcatcagcttttgggtaatttttccatcttcaattatttcttattttacatgtttgatcgaatgcctca-tggatttacttttacaaatcatgttctt 829  Q
    |||||||| |||||| || ||||||||||||| ||||| |||||||||||| |||| ||| |||||||||| | ||||||||||||||| | ||||||||    
T  19789726 attcatcaccttttgtgtcatttttccatcttaaattacttcttattttacttgttagattgaatgcctcatttgatttacttttacaacttatgttctt 19789825  T
Q  830 tttgggttacaaatgtgtgtt 850  Q
    ||||| |||||||||||||||    
T  19789826 tttggattacaaatgtgtgtt 19789846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 4059524 - 4059710
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||| |||||| ||||||||| ||||||||||||| || |||||        |  ||||||||||||||||| || |||||||||||    
T  4059524 ctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctattaaaaaaaattgcaattttggcccctttcatcccaaaattgctg 4059623  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| ||||| ||  |||||| |||| ||||||  ||||||||||| ||||| | ||||||| ||||||||||    
T  4059624 agaagacgccacgtgtcccaaaaaatggaccataatcgcaactttttgtaaagataaggggtcaaaa-aacatattttccttatgtta 4059710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 184 - 369
Target Start/End: Original strand, 4455045 - 4455231
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttgg-tcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| | |||| ||||        | |||||||||| |  ||||||| |||||||||||    
T  4455045 taaactgcacttttcgacccctaagttttaaaatgttgcgattttagctcct-tattaaaaaaaattacaattttggtctttttcgtcccaaaattgctg 4455143  T
Q  283 agaagacgccacgtgtcccaaaaagg-ggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||| ||||| |||||||||||   || |||||| |||| |||||||||||||||| || ||||| ||||||||||||||||||||    
T  4455144 agaagatgccacatgtcccaaaaaaatggccataatcgcaactttttgagaagataagtggtcaaaaaatcatatttcccttatgtta 4455231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 248 - 373
Target Start/End: Original strand, 18606751 - 18606876
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    ||||||||||||||||||||||| | || |||||||| |||||| ||||||||||||| | |||| |||||  ||| ||||||||||||||||||| |||    
T  18606751 tgacaattttggcccctttcgtcccgaa-ttgctgagcagacgctacgtgtcccaaaacaagggtgataatcacaactttttgagaagataaggggtcaa 18606849  T
Q  347 aagatcatatttcccttatgttatggg 373  Q
    |||||| ||||| ||||||||||||||    
T  18606850 aagatcgtattttccttatgttatggg 18606876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 46432218 - 46432404
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||| |||||| |||||| || ||||||||||||| || |||||        |  ||||||||||||||||| || ||||||||||     
T  46432218 ctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggccccctattaaaaaaaatagcaattttggcccctttcatcccaaaattgctc 46432317  T
Q  283 agaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
     ||||| ||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  46432318 ggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 46432404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 9387933 - 9387809
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaaga--cgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggcc 344  Q
    ||||||||||||  ||||||||| |||||||| ||||||||  |||||| |||||||||| ||| |||||||| |||| ||||||||||||||| ||| |    
T  9387933 tgacaattttggttcctttcgtcccaaaattgatgagaagagacgccacatgtcccaaaacaggtgtcataatcgcaaatttttgagaagataaagggtc 9387834  T
Q  345 aaaagatcatatttcccttatgtta 369  Q
    ||||||| |||||||||||||||||    
T  9387833 aaaagattatatttcccttatgtta 9387809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 24962187 - 24962069
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||| ||||||| ||  |||||||||||||||||||||||||||||| |||||||| |||||| |||| ||||||  ||||||||||| |||||     
T  24962187 caattttggtccctttcatcaaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 24962089  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  24962088 agcatatttcccttatgtta 24962069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 251 - 367
Target Start/End: Complemental strand, 3617033 - 3616917
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||  ||  |||||||||||||||||||||||||||||| |||||||| |||||| |||| ||||||  ||||||||||| |||||     
T  3617033 caattttggccccttttatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 3616935  T
Q  350 atcatatttcccttatgt 367  Q
    | ||||||||||||||||    
T  3616934 aacatatttcccttatgt 3616917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 251 - 371
Target Start/End: Complemental strand, 24750032 - 24749912
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||||| ||| ||||| ||| |||||| |||| ||||||  ||||||||||| |||||     
T  24750032 caattttggcccctttcatctaaaaattgctaagaagacgccacgtgttccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaa- 24749934  T
Q  350 atcatatttcccttatgttatg 371  Q
    | ||||||||||||||||||||    
T  24749933 agcatatttcccttatgttatg 24749912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 21148248 - 21148126
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctga 283  Q
    |||||||||||| ||||||||||| ||| |||| ||||||||||||| || |||||        | |||||| |||||||||||||| ||||| ||||||    
T  21148248 taaactgcacttttcgacccctaaattttaaaatgttgcgattttggccccctattaaaaaaaattacaattatggcccctttcgtcccaaaactgctga 21148149  T
Q  284 gaagacgccacgtgtcccaaaaa 306  Q
    ||| |||||||||||||||||||    
T  21148148 gaaaacgccacgtgtcccaaaaa 21148126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 177 - 369
Target Start/End: Complemental strand, 2425531 - 2425339
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaa 276  Q
    ||||| ||||||||||||| | | |||||| |||||| || ||||||||||||| || |||||         | |||||||||||| |||| || |||||    
T  2425531 tttaggctaaactgcactttttgccccctatgtttcataatgttgcgattttggccccctattaaaaaaatag-caattttggcccatttcatcccaaaa 2425433  T
Q  277 ttgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||| |||||| ||||||||||||| |||| |||||||||| |||| ||||||  ||||||||||   |||| | ||||||||||||||||||    
T  2425432 ttgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaagataagggttaaaaaaaacatatttcccttatgtta 2425339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 250 - 369
Target Start/End: Complemental strand, 29676314 - 29676195
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    |||||||||||||||||| ||  ||||||| ||||||| |||||||||||||| |||||||| |||||| |||| |||||   ||||||||||| |||||    
T  29676314 acaattttggcccctttcatcaaaaaattgttgagaaggcgccacgtgtcccaaaaaaggggccataatcgcaactttttataaagataaggggtcaaaa 29676215  T
Q  349 gatcatatttcccttatgtta 369  Q
     | |||||||| |||||||||    
T  29676214 -agcatatttcacttatgtta 29676195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 2657583 - 2657700
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaag-gggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||||||| ||| |||||||| |||||| ||||||||||||| |||||  ||||||||||  ||| ||||| | ||||||||||| ||||||    
T  2657583 caattttggccccttttgtcccaaaattgttgagaa-acgccacgtgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaag 2657681  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||| ||||||||||    
T  2657682 agcatattt-ccttatgtta 2657700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 251 - 351
Target Start/End: Original strand, 9554271 - 9554372
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||  |||||||| ||||||||  |||||| ||||||||||| ||||| ||||| |||| | |||| ||||||||||||||||||| ||||||    
T  9554271 caattttggcttctttcgtcccaaaattgtagagaaggcgccacgtgtctcaaaacaggggccatagtcgcaactttttgagaagataaggggtcaaaag 9554370  T
Q  350 at 351  Q
    ||    
T  9554371 at 9554372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 47685335 - 47685217
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcc-caaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||| |||||||||| | |||||||||| ||||||||||||||||||  |||||| |||||| || |||| ||||||  ||| ||||||| |||||     
T  47685335 caatttttgcccctttcggcccaaaattgctaagaagacgccacgtgtcctaaaaaagaggtcattatcgcaactttttgtaaaggtaaggggtcaaaa- 47685237  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||| ||||||||||    
T  47685236 aacatattttccttatgtta 47685217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 348
Target Start/End: Original strand, 28920727 - 28920825
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa--ggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    ||||||| |||||||| ||  |||||||||||||||||||||| |||||||||||  |||| |||||| || | ||||||  ||||||||||| |||||    
T  28920727 aattttgacccctttcatccaaaaattgctgagaagacgccacatgtcccaaaaaagggggccataatcgccactttttgtaaagataaggggtcaaaa 28920825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 906 - 968
Target Start/End: Original strand, 19789896 - 19789957
Alignment:
Q  906 ttttatttaagttgtgaattcaattctctaacaccattatgcaagggattgagaagagataaa 968  Q
    ||||||||||||||||||||||| | || ||||||||||| |||||||||||||| |||||||    
T  19789896 ttttatttaagttgtgaattcaactttc-aacaccattatacaagggattgagaatagataaa 19789957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 28552305 - 28552363
Alignment:
Q  181 gactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||| |||||    
T  28552305 gactaaagtgcacttttcgccccctaagtttcaaaatgttgcgattttggtcccctatt 28552363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 24196254 - 24196319
Alignment:
Q  174 aaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||| ||| ||||||| ||||| ||| |||||||||||||||| ||||||||||||| ||||||||    
T  24196254 aaatataggctaaactccacttttcgccccctaagtttcaaaatgttgcgattttggccctctatt 24196319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 306
Target Start/End: Original strand, 26605278 - 26605402
Alignment:
Q  180 agactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattg 279  Q
    |||||||| ||||||| | ||||||||||||| |||| |||||||||||| ||||||| ||       ||| |||||| ||||||||  |  ||||||||    
T  26605278 agactaaattgcactttttgacccctaagttttaaaatgttgcgattttgatcctcta-ttaaaaaaatgaaaatttt-gccccttttattccaaaattg 26605375  T
Q  280 ctgagaagacgccacgtgtcccaaaaa 306  Q
    || ||||||||| ||||||||||||||    
T  26605376 ctaagaagacgctacgtgtcccaaaaa 26605402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 10684965 - 10684909
Alignment:
Q  313 ataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||  |||||||||    
T  10684965 ataatcgcaactttttgagaagataaggggtcaaaagatcatatttttcttatgtta 10684909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 51719192 - 51719284
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataagggg 342  Q
    ||||||||| ||||||| |  |||||||||| |||||| ||||||| || || ||||||||||||||| |||| ||||||  |||||||||||    
T  51719192 caattttggtccctttcattccaaaattgctcagaagatgccacgtatctcagaaaaggggtcataatcgcaactttttgtaaagataagggg 51719284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 28920958 - 28920897
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||| ||||||| ||||| ||| |||||||||||||||| ||||||||||||| || |||||    
T  28920958 ttaggctaaacttcacttttcgccccctaagtttcaaaatgttgcgattttggccccctatt 28920897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 16878987 - 16878931
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    ||||||||||||| ||| | |||||||||||||| |||| ||||||||||| |||||    
T  16878987 ctaaactgcacttttcgccacctaagtttcaaaatgttgagattttggtcccctatt 16878931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 356
Target Start/End: Complemental strand, 16858536 - 16858458
Alignment:
Q  280 ctgagaagacgccacgtgtcccaaaaa-ggggtcataattgcaagttttt-gagaagataaggggccaaaagatcatat 356  Q
    |||||||| |||||| ||||||||||| |||| |||||| |||| ||||| |  ||||||||||||||||||| |||||    
T  16858536 ctgagaagccgccacatgtcccaaaaaaggggccataatcgcaacttttttgtaaagataaggggccaaaagagcatat 16858458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 31084683 - 31084800
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    ||||||||||  ||||||  |||||||| ||||||  | |||| ||||||||||| ||||||||||| | || ||||||  ||||||||||| ||||| |    
T  31084683 aattttggcctatttcgttccaaaattgttgagaaagccccacatgtcccaaaaagggggtcataatcgaaactttttgtaaagataaggggtcaaaa-a 31084781  T
Q  351 tcatatttcccttatgtta 369  Q
     ||||||| || |||||||    
T  31084782 gcatattttccatatgtta 31084800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 6285187 - 6285224
Alignment:
Q  202 ccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  6285187 ccctaagtttcaaaatgttgcgattttggtcccctatt 6285224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 18606996 - 18606939
Alignment:
Q  172 taaaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttg 229  Q
    ||||| |||| ||||||| ||||| ||||||||||||||| |||| |||| |||||||    
T  18606996 taaaagttaggctaaactacacttttcgacccctaagttttaaaatgttgtgattttg 18606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 51685870 - 51685809
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctat 238  Q
    ||||| ||||| ||||||| ||  || |||| |||||||||||||||||||||| |||||||    
T  51685870 tttaggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctat 51685809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 75; Significance: 5e-34; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 758 - 945
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||  ||| |||||||| ||| ||||||||||||| || |||||        || ||||||||||||| |||||| |||||||| ||    
T  758 ctaaactgcacttttcaccccttaagtttcgaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcgtcccaaaattgttg 857  T
Q  283 agaagacgccacgtgtcccaaa-aaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||  ||||||||| |||||||||||||||||| ||||||  ||||||||||| ||||||| ||||||| ||||||||||    
T  858 agaagacgccagatgtcccaaataaggggtcataattgcaactttttgtaaagataaggggtcaaaagagcatatttaccttatgtta 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 183 - 381
Target Start/End: Complemental strand, 10225 - 10024
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntga--caattttggcccctttcgtctcaaaattgc 280  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||||| | | |||          |  ||||||||| |||||||||| ||||||||     
T  10225 ctaaactgcacttttcgacccctaagttttaaaacgttgcgattttggtacccaattaaaaaaaaaaatacaattttggtccctttcgtcccaaaattgt 10126  T
Q  281 tgagaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatgggtcgaaa 379  Q
    |||||||||||||| |||| |||||| ||||  ||||| |||| ||||||||||||||||||| | ||||||||||||| |||||||||||||||| |||    
T  10125 tgagaagacgccacatgtcacaaaaaaggggaaataatcgcaactttttgagaagataaggggtctaaagatcatattttccttatgttatgggtcaaaa 10026  T
Q  380 ga 381  Q
    ||    
T  10025 ga 10024  T

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Target: chr2 (Bit Score: 74; Significance: 2e-33; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 251 - 375
Target Start/End: Complemental strand, 28365744 - 28365619
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaag-gggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||| ||||||||||| |||||||||||||||||||||| | ||||||||||  |||||||||| |||| |||||||||||||||||||  |||||    
T  28365744 caattttgccccctttcgtcccaaaattgctgagaagacgccatgcgtcccaaaaaaagggtcataatcgcaactttttgagaagataaggggttaaaag 28365645  T
Q  350 atcatatttcccttatgttatgggtc 375  Q
    ||||||||||||| |||||| |||||    
T  28365644 atcatatttccctcatgttaggggtc 28365619  T

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Target: chr2; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 252 - 381
Target Start/End: Original strand, 26829160 - 26829290
Alignment:
Q  252 aattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa--ggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| |||||||||  |||| ||||||  ||| ||||||||| ||||||||| ||||||    
T  26829160 aattttggcccctttcgtctcaaaattgttgagaagacgctacgt-tcccaaaaaagggggccataatcacaactttttgagatgataaggggtcaaaag 26829258  T
Q  350 atcatatttcccttatgttatgggtcgaaaga 381  Q
    |||||||||||||||||||| ||||| |||||    
T  26829259 atcatatttcccttatgttaggggtccaaaga 26829290  T

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Target: chr2; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 176 - 371
Target Start/End: Original strand, 18537824 - 18538018
Alignment:
Q  176 atttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaa 275  Q
    |||||| ||||||||||||| ||| |||||| |||| |||| ||||| |||||||||| |||||         | ||||||||||||||||| ||  |||    
T  18537824 atttaggctaaactgcacttttcgtcccctatgttttaaaatgttgcaattttggtcccctattaaaaaaatag-caattttggcccctttcatccaaaa 18537922  T
Q  276 attgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttatg 371  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||  ||||||||||| ||||| | ||||||||||| ||||||||    
T  18537923 attgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa-agcatatttccctaatgttatg 18538018  T

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Target: chr2; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 171 - 369
Target Start/End: Complemental strand, 15701060 - 15700863
Alignment:
Q  171 ttaaaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtc 270  Q
    |||||| |||| ||||| ||||||| ||| |||||| |||||| || |||||||||||| ||| ||||||        | ||||||||||||||||| ||    
T  15701060 ttaaaaattaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatttaaaaaatag-caattttggcccctttcatc 15700962  T
Q  271 tcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
     |||||||||| |||||| ||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  15700961 ccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 15700863  T

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Target: chr2; HSP #5
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 22191347 - 22191162
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||| ||||| ||| | |||| ||||||||| ||||| |||||||||| |||||         | ||||||||||||||||| || |||||||||||    
T  22191347 ctaaactacacttttcgcctcctatgtttcaaaatgttgcaattttggtcccctattaaaaaaaaaggcaattttggcccctttcatcccaaaattgctg 22191248  T
Q  283 agaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||| |||||||||||||||||| |||||||||| | || ||||||  ||||||||||| ||||||  ||||||||||||||||||    
T  22191247 agaaggcgccacgtgtcccaaaaaagggtcataatcgtaactttttgtaaagataaggggtcaaaag-gcatatttcccttatgtta 22191162  T

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Target: chr2; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 183 - 369
Target Start/End: Complemental strand, 15735365 - 15735180
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||| ||||| ||| |||||| |||| |||| ||||| |||||||||| || |||       || ||||||||||||||||| || |||||||| ||    
T  15735365 ctaaactccacttttcgccccctatgttttaaaatgttgcaattttggtcccct-tttaaaaaaatggcaattttggcccctttcatcccaaaattgttg 15735267  T
Q  283 agaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||||||| |||||||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  15735266 agaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaata-catatttcccttatgtta 15735180  T

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Target: chr2; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 184 - 385
Target Start/End: Complemental strand, 36464572 - 36464371
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctga 283  Q
    |||||||||||| ||| | |||||||||||||| |||||||||||| |||  ||||        |||||||||||| || ||||||| ||||||||||||    
T  36464572 taaactgcacttttcgcctcctaagtttcaaaatgttgcgattttgatcccttatt-aaaaaaatgacaattttggtccatttcgtcccaaaattgctga 36464474  T
Q  284 gaagacgccacgtgtcccaaaaa-ggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta-tgggtcgaaaga 381  Q
    ||||| | |||||||| |||||| |||| |||| | |||| ||||||||||||||||| | |||||||| |||||||||||||||||  ||||| |||||    
T  36464473 gaagatgtcacgtgtctcaaaaaaggggccata-tcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaaga 36464375  T
Q  382 tcat 385  Q
    ||||    
T  36464374 tcat 36464371  T

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Target: chr2; HSP #8
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 9051098 - 9051215
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||| ||| |||||| |||| ||||||  |||||||| || ||||| |    
T  9051098 caattttggcccccttcatctcaaaattgctgagaagacgccccgtgtcccaaaaaagggccataatcgcaactttttgtaaagataagaggtcaaaa-a 9051196  T
Q  351 tcatatttcccttatgtta 369  Q
     ||||||||||||||||||    
T  9051197 gcatatttcccttatgtta 9051215  T

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Target: chr2; HSP #9
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 9787796 - 9787675
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaa 346  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||||||| |||||| | || ||||||  ||||||||||| |||    
T  9787796 tgacaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgtaactttttgtaaagataaggggtcaa 9787697  T
Q  347 aagatcatatttcccttatgtta 369  Q
    || | ||||||||||||||||||    
T  9787696 aa-agcatatttcccttatgtta 9787675  T

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Target: chr2; HSP #10
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 175 - 369
Target Start/End: Original strand, 25884172 - 25884366
Alignment:
Q  175 aatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaa 274  Q
    ||||||| ||||||||||| | ||| ||||||||||| |||| ||||||||||||| || |||||        ||  ||||||||||| ||||||| |||    
T  25884172 aatttaggctaaactgcacatttcgccccctaagttttaaaatgttgcgattttggccccctatt-aaaaaaatggtaattttggcccttttcgtcccaa 25884270  T
Q  275 aattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||| || | ||  ||||||||| |||||  ||||| |||| |||||||||||||||||||  |||| ||||||||||||||||||||    
T  25884271 aattgctgagaaaacactacacgtcccaaaacaggggcaataatcgcaactttttgagaagataaggggttaaaatatcatatttcccttatgtta 25884366  T

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Target: chr2; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 250 - 369
Target Start/End: Original strand, 4104893 - 4105013
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaa 348  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||| ||||||  || |||||| | |||||    
T  4104893 acaattttgacccatttcgtcccaaaattgctgagaagacgccacgtgttcctaaaaaggggtcataatcgcaactttttgtaaatataaggtgtcaaaa 4104992  T
Q  349 gatcatatttcccttatgtta 369  Q
    || |||||| |||||||||||    
T  4104993 gagcatattccccttatgtta 4105013  T

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Target: chr2; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 177 - 369
Target Start/End: Original strand, 30714271 - 30714462
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaa 276  Q
    ||||| ||||| ||||||| ||| |||||| |||| |||| ||||||||||||| || |||||        || ||||||||||||||||| || |||||    
T  30714271 tttaggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttggccccctatt-aaaaaaatggcaattttggcccctttcatcccaaaa 30714369  T
Q  277 ttgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||||||||||| |||||| ||||||||| ||||||  ||| ||||||  ||||||| ||| ||||| | ||||||||||||||||||    
T  30714370 ttgctgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataacgggtcaaaa-agcatatttcccttatgtta 30714462  T

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Target: chr2; HSP #13
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 174 - 369
Target Start/End: Complemental strand, 11176218 - 11176023
Alignment:
Q  174 aaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctca 273  Q
    |||||||| ||||| ||||||| | | | |||| ||||||||| ||||||||||||  || |||||        || ||||||||  ||||||| || ||    
T  11176218 aaatttaggctaaagtgcacttttggcctcctatgtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaattttgatccctttcatccca 11176119  T
Q  274 aaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||  ||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  11176118 aaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 11176023  T

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Target: chr2; HSP #14
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 17368450 - 17368332
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  |||| || |||||||||||||||||||||| |||||||| ||||||||||| ||||||  ||||||||||| |||||     
T  17368450 caattttggcccctttcatccaaaaaatgttgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa- 17368352  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  17368351 agcatatttcccttatgtta 17368332  T

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Target: chr2; HSP #15
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 38716427 - 38716309
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||||||| |||||| |||| ||||||  ||||||||||| |||||     
T  38716427 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 38716329  T
Q  350 atcatatttcccttatgtta 369  Q
    | |||||||| |||||||||    
T  38716328 agcatatttctcttatgtta 38716309  T

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Target: chr2; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 208 - 369
Target Start/End: Complemental strand, 2986963 - 2986802
Alignment:
Q  208 gtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcc-caaaaa 306  Q
    ||||||||| ||||||||||||| || |||||        || ||||||||||||| ||| || |||||||||||||||||||||| ||||||  |||||    
T  2986963 gtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaattttggcccccttcatcccaaaattgctgagaagacgccatgtgtccaaaaaaa 2986864  T
Q  307 ggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  2986863 ggggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 2986802  T

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Target: chr2; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 25298871 - 25298989
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||| ||| || |||||||| |||||||| |||||||||||| ||||||||| |||||| |||| ||||||  ||||||||||  |||||     
T  25298871 caattttggcccccttcatcccaaaattgttgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagggatcaaaa- 25298969  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||| ||||||||    
T  25298970 aacatatttcctttatgtta 25298989  T

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Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 6763787 - 6763905
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||| || |||  || |||||||||||||||||||||||||||||| ||||||||| | |||| || | ||||||  ||||||||||| |||||     
T  6763787 caattttggtccattttatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccgtaatcgctactttttgtaaagataaggggtcaaaa- 6763885  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||| ||||||||||    
T  6763886 agcatattttccttatgtta 6763905  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 385
Target Start/End: Complemental strand, 14743531 - 14743416
Alignment:
Q  272 caaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgttat 370  Q
    |||| ||||||||||| | ||||||||||||||| |||||  ||||| |||| ||||||  || |||||||||||||||| |||||||| |||| |||||    
T  14743531 caaagttgctgagaagccaccacgtgtcccaaaataggggctataatcgcaaatttttgcaaaaataaggggccaaaagagcatatttctcttaagttat 14743432  T
Q  371 -gggtcgaaagatcat 385  Q
     ||||| |||||||||    
T  14743431 agggtcaaaagatcat 14743416  T

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Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 22387141 - 22387192
Alignment:
Q  255 tttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa 306  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  22387141 tttgacccctttcgtctcaaaattgctgagaagacgccacttgtcccaaaaa 22387192  T

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Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 21773399 - 21773496
Alignment:
Q  248 tgacaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggcca 345  Q
    ||||||||||||||| ||||||| |||||||| |||||||| ||||||||||||| || |||||  | ||| |||| ||||| ||||||||||||||||    
T  21773399 tgacaattttggccc-tttcgtcccaaaattgttgagaagaagccacgtgtcccagaacaggggctaaaatcgcaacttttttagaagataaggggcca 21773496  T

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Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 820 - 913
Target Start/End: Original strand, 32280552 - 32280643
Alignment:
Q  820 tcatgttctttttgggttacaaatgtgtgttatgtatttaggctttgaaattgtctccaagtcttgttaaattcttcaatgaatccttttattt 913  Q
    |||||||||||||||||||||||||| |||| |  | ||||||||| ||||||||||| | || | ||| |||||||||||||| |||||||||    
T  32280552 tcatgttctttttgggttacaaatgt-tgttttagaattaggctttaaaattgtctcc-actccttttacattcttcaatgaattcttttattt 32280643  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 2123583 - 2123497
Alignment:
Q  278 tgctgagaagacgccacgtgtcccaaaa-aggg-gtcataattgcaagtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    ||||||||||||||||| |||||||||| |||| |||| |||||||| ||||||  ||||||| ||| ||||||| | |||||||||    
T  2123583 tgctgagaagacgccacatgtcccaaaacagggtgtcaaaattgcaactttttgtaaagataaagggtcaaaagaacttatttccct 2123497  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 369
Target Start/End: Complemental strand, 2190741 - 2190648
Alignment:
Q  277 ttgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||| ||| || |||||||||| | |||||||||  |||| ||||||  |||||||||||||||| || ||||||| ||||| ||||    
T  2190741 ttgctgagaagccgcaacatgtcccaaaatatgggtcataaccgcaactttttgtaaagataaggggccaaacgagcatattttccttaagtta 2190648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 260 - 381
Target Start/End: Complemental strand, 12350236 - 12350116
Alignment:
Q  260 cccctttcgtctcaaaattgctgagaagacgccacgtg-tcccaaaaaggggtca--taattgcaagtttttgagaagataaggggccaaaagatcatat 356  Q
    ||||||||||||||||||| |||| |||||||||| || ||| |||||| | |||  |||| |||| |||||||||||||||     ||||| |||||||    
T  12350236 cccctttcgtctcaaaattactgacaagacgccacatgttccaaaaaagagatcatttaatcgcaactttttgagaagataa----tcaaaatatcatat 12350141  T
Q  357 ttcccttatgttatgggtcgaaaga 381  Q
    ||||||||  ||| ||||| |||||    
T  12350140 ttcccttaccttaggggtcaaaaga 12350116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 15735066 - 15735122
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    ||||||| ||||| ||| || ||||||||||||| |||||||||||||||| |||||    
T  15735066 ctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggtcccctatt 15735122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 4587856 - 4587918
Alignment:
Q  177 tttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    ||||| ||||||  ||||| ||| |||||||||||||||| ||||||||||||| || |||||    
T  4587856 tttaggctaaacaccacttttcgccccctaagtttcaaaatgttgcgattttggccccctatt 4587918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 369
Target Start/End: Complemental strand, 4588042 - 4587977
Alignment:
Q  303 aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||| |||| ||||||  |||||||||||  |||| | ||||||||||||||||||    
T  4588042 aaaaggggtcataatcgcaactttttgtaaagataaggggttaaaa-aacatatttcccttatgtta 4587977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 18538135 - 18538074
Alignment:
Q  178 ttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatt 239  Q
    |||| ||||||| ||||| ||| || ||||||||||||| ||||||||||||| || |||||    
T  18538135 ttaggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctatt 18538074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 71; Significance: 1e-31; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 171 - 369
Target Start/End: Complemental strand, 49972 - 49775
Alignment:
Q  171 ttaaaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtc 270  Q
    |||||| |||| ||||| ||||||| ||| |||||| |||||| || |||||||||||| ||| ||||||        | ||||||||||||||||| ||    
T  49972 ttaaaaattaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatttaaaaaatag-caattttggcccctttcatc 49874  T
Q  271 tcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
     |||||||||| |||||| ||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  49873 ccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 49775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 171 - 369
Target Start/End: Complemental strand, 62511 - 62314
Alignment:
Q  171 ttaaaatttagactaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtc 270  Q
    |||||| |||| ||||| ||||||| ||| |||||| |||||| || |||||||||||| ||| ||||||        | ||||||||||||||||| ||    
T  62511 ttaaaaattaggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttgatcccctatttaaaaaatag-caattttggcccctttcatc 62413  T
Q  271 tcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
     |||||||||| |||||| ||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  62412 ccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 62314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 65; Significance: 5e-28; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 183 - 353
Target Start/End: Complemental strand, 9335 - 9163
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    |||||| ||| || ||||||  ||||||| |||| |||||||||||| ||| |||||        | ||||||||||||||||||||| ||||||||||     
T  9335 ctaaacagcaattttcgaccaataagttttaaaatgttgcgattttgatccgctattaaaaaaaattacaattttggcccctttcgtcccaaaattgctt 9236  T
Q  283 agaagacgccacgtgtcccaaaaa--ggggtcataattgcaagtttttgagaagataaggggccaaaagatca 353  Q
    |||||||| |||||||||||||||  ||||||||||| |||| ||||||| ||||||| ||| ||||||||||    
T  9235 agaagacgtcacgtgtcccaaaaaagggggtcataatcgcaactttttgaaaagataatgggtcaaaagatca 9163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 2119 - 2237
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||  ||||||||||| |||||     
T  2119 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 2217  T
Q  350 atcatatttcccttatgtta 369  Q
    | |||||| |||||||||||    
T  2218 agcatattgcccttatgtta 2237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 64; Significance: 2e-27; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 251 - 381
Target Start/End: Complemental strand, 19516 - 19386
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    |||||||||||| |||| ||  |||||||||||||||||||||||||||||| |||||||| |||||| |||| ||||||  ||||||||||| |||||     
T  19516 caattttggcccatttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 19418  T
Q  350 atcatatttcccttatgttatgggtcgaaaga 381  Q
    | |||||||||||||||||| ||||| |||||    
T  19417 agcatatttcccttatgttaggggtcaaaaga 19386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 62050 - 61930
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca---aaaaggggtcataattgcaagtttttgagaagataaggggccaaa 347  Q
    ||||||||||||||||| ||  ||||||| ||||||||||||||||||||||   |||||||| ||||||||||| ||||||  ||||||||||| ||||    
T  62050 caattttggcccctttcatccaaaaattgttgagaagacgccacgtgtcccaaaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaa 61951  T
Q  348 agatcatatttcccttatgtta 369  Q
    | | ||||||||||||||||||    
T  61950 a-agcatatttcccttatgtta 61930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 184 - 363
Target Start/End: Original strand, 43827 - 44007
Alignment:
Q  184 taaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctga 283  Q
    |||||||||||| ||| | |||||||||||||| ||| | ||||||| || ||||||       || || |||| ||| ||| |||| ||||||||||||    
T  43827 taaactgcacttttcgcctcctaagtttcaaaatgtttcaattttggccccctatttaagaaaatggcagtttttgcctcttccgtcacaaaattgctga 43926  T
Q  284 gaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttccctt 363  Q
    |||||||||||||||||||||| ||||  |||| | |||| |||||||||||||||  || ||||||||||||||||||||    
T  43927 gaagacgccacgtgtcccaaaacagggaccatagtcgcaactttttgagaagataaaaggtcaaaagatcatatttccctt 44007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 63; Significance: 8e-27; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 2963 - 3148
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||| ||||||| ||| |||||| ||||||||| ||||||||||||| || |||||        || ||||||||||||| ||| || |||||||| ||    
T  2963 ctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggccccctatt-aaaaaaatggcaattttggcccccttcatcccaaaattgatg 3061  T
Q  283 agaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    ||||||||||||||||||| |||||| || ||||||||||| ||||||  |||||||| || ||||| | ||||||||||||||||||    
T  3062 agaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataagaggtcaaaa-aacatatttcccttatgtta 3148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 183 - 369
Target Start/End: Original strand, 5652 - 5837
Alignment:
Q  183 ctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttggtcctctatttnnnnnnntgacaattttggcccctttcgtctcaaaattgctg 282  Q
    ||||||||||||| ||| |||||| ||||||||| ||| | ||||||| |  |||||        || ||||||||| ||||||  || |||||||||||    
T  5652 ctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcctcctattaaaaaaaatggcaattttggtcccttttatcccaaaattgctg 5751  T
Q  283 agaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
     ||||||||||||||||||||||| ||| |||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  5752 cgaagacgccacgtgtcccaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaa-aacatatttcccttatgtta 5837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 6065 - 5948
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaaga 350  Q
    ||||||||||||| ||| || ||||||||||||||||| |||||||||||||||||  ||||||||| |||| |||||   ||||||||||| ||||| |    
T  6065 caattttggcccccttcatcccaaaattgctgagaagatgccacgtgtcccaaaaaaaggtcataatcgcaactttttataaagataaggggtcaaaa-a 5967  T
Q  351 tcatatttcccttatgtta 369  Q
     ||||||||||||||||||    
T  5966 gcatatttcccttatgtta 5948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 250 - 369
Target Start/End: Complemental strand, 112362 - 112242
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaaggggtc-ataattgcaagtttttgagaagataaggggccaaaa 348  Q
    ||||||||||||  |||||||  |||||||| ||||||||||||| |||||||||||  || | ||||  |||| ||||||||||||||||| | |||||    
T  112362 acaattttggcctttttcgtcctaaaattgcagagaagacgccacatgtcccaaaaaatggaccataaccgcaactttttgagaagataaggagtcaaaa 112263  T
Q  349 gatcatatttcccttatgtta 369  Q
    |||||||||||||||||||||    
T  112262 gatcatatttcccttatgtta 112242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 142017 - 142135
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||||| ||| |||||| |||| ||||||  |||||||| || |||||     
T  142017 caattttggcccctttcatctaaaaattgcttagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataagaggtcaaaa- 142115  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  142116 agcatatttcccttatgtta 142135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 54576 - 54492
Alignment:
Q  278 tgctgagaagacgccacgtgtcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    |||||||||| |||||| ||||||||||||||| |||||| |||| ||||||  ||||||||||||||||||| |||||||||||    
T  54576 tgctgagaagccgccacatgtcccaaaaaggggccataatcgcaactttttgtaaagataaggggccaaaagagcatatttccct 54492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 250588 - 250703
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||| ||||||||| ||||||  ||| ||||||  ||||||||||| |||||     
T  250588 caattttggcccccttcatctgaaaattgctgagaagacgccacgtgccccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaa- 250686  T
Q  350 atcatatttcccttatg 366  Q
    | |||||||||||||||    
T  250687 aacatatttcccttatg 250703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 2225 - 2107
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccca-aaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||||||| ||||||||  ||||| |||| ||||||  |||||| |||| |||||     
T  2225 caattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagatatggggtcaaaa- 2127  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||| ||||||||||||||    
T  2126 agcatgtttcccttatgtta 2107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 25034 - 25152
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||||| ||||||||| ||||||  ||| ||||    ||||||||||| |||||     
T  25034 caattttggcccctttcataccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaacttttgttaaagataaggggtcaaaa- 25132  T
Q  350 atcatatttcccttatgtta 369  Q
    | ||||||||||||||||||    
T  25133 agcatatttcccttatgtta 25152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 251 - 369
Target Start/End: Complemental strand, 66408 - 66290
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtg-tcccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||||||||| ||  |||||| |||||||||||||||||| ||  |||||||||||||||| |||| ||||||  ||||||||||| |||||     
T  66408 caattttggcccctttcatccaaaaatttctgagaagacgccacgtgttcaaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa- 66310  T
Q  350 atcatatttcccttatgtta 369  Q
    | |||| |||||||||||||    
T  66309 agcatagttcccttatgtta 66290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 250 - 369
Target Start/End: Original strand, 2996 - 3117
Alignment:
Q  250 acaattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtccc--aaaaaggggtcataattgcaagtttttgagaagataaggggccaaa 347  Q
    |||||||||||||||||||||  |||||||  ||||||||||||| ||| ||   ||| ||||||||||| |||| ||||||  || |||||||| ||||    
T  2996 acaattttggcccctttcgtcctaaaattgaagagaagacgccacatgttcctagaaagggggtcataatcgcaactttttgtaaaaataaggggtcaaa 3095  T
Q  348 agatcatatttcccttatgtta 369  Q
    | | ||||||| ||||||||||    
T  3096 atagcatatttaccttatgtta 3117  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 362
Target Start/End: Original strand, 35174 - 35286
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtc-ccaaaaaggggtcataattgcaagtttttgagaagataaggggccaaaag 349  Q
    ||||||||||| ||||||||||||||||| |||||| |||||| ||||| | ||||||   |||||||  |||||||||   ||||||||||| ||||||    
T  35174 caattttggcctctttcgtctcaaaattgttgagaaaacgccatgtgtctcaaaaaagatatcataatcacaagtttttctaaagataaggggtcaaaag 35273  T
Q  350 atcatatttccct 362  Q
    |  ||||||||||    
T  35274 agtatatttccct 35286  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 55062 - 54989
Alignment:
Q  290 gccacgtgtcccaaaaaggggtcataattgc-aagtttttgagaagataaggggccaaaagatcatatttccct 362  Q
    ||||||||||||||||| ||| || |||||| || ||||||  ||||||||||| ||||| | |||||||||||    
T  55062 gccacgtgtcccaaaaaagggccaaaattgcaaattttttgtaaagataaggggtcaaaaaaacatatttccct 54989  T

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Target: scaffold0267 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 263 - 369
Target Start/End: Original strand, 3650 - 3756
Alignment:
Q  263 ctttcgtctcaaaattgctgagaagacgccacgtgtccc-aaaaaggggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttccc 361  Q
    ||||| || |||||||||||||||||| || |||||||| |||||||||  ||||| | || ||||||  ||||||||||| ||||| | ||||||||||    
T  3650 ctttcatcccaaaattgctgagaagacacctcgtgtcccaaaaaaggggctataatcgaaactttttgtaaagataaggggtcaaaa-agcatatttccc 3748  T
Q  362 ttatgtta 369  Q
    ||||||||    
T  3749 ttatgtta 3756  T

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Target: scaffold0683 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 5191 - 5246
Alignment:
Q  251 caattttggcccctttcgtctcaaaattgctgagaagacgccacgtgtcccaaaaa 306  Q
    ||||||||||||||||| ||  |||||||||||||||||| || ||||||||||||    
T  5191 caattttggcccctttcatccaaaaattgctgagaagacgtcatgtgtcccaaaaa 5246  T

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Target: scaffold0474 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 8071 - 8130
Alignment:
Q  272 caaaattgctgagaagacgccacgtgtcccaaaa-aggggtcataattgcaagtttttga 330  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||| |||| |||||||    
T  8071 caaaattgctgagaagatgccacgtgtcccaaaacaggggccataatcgcaaatttttga 8130  T

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Target: scaffold1202 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 1902 - 1962
Alignment:
Q  308 gggtcataattgcaagtttttgagaagataaggggccaaaagatcatatttcccttatgtta 369  Q
    |||||||||| |||| ||||||  ||||||||||| ||||| | ||||||||||||||||||    
T  1902 gggtcataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgtta 1962  T

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