View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19675_high_33 (Length: 375)

Name: NF19675_high_33
Description: NF19675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19675_high_33
NF19675_high_33
[»] scaffold0110 (2 HSPs)
scaffold0110 (63-225)||(49452-49620)
scaffold0110 (331-375)||(49706-49750)
[»] chr8 (28 HSPs)
chr8 (64-225)||(37698000-37698162)
chr8 (63-225)||(35917711-35917873)
chr8 (63-187)||(39584855-39584979)
chr8 (77-187)||(27126598-27126709)
chr8 (77-225)||(2612543-2612697)
chr8 (77-225)||(6837736-6837886)
chr8 (331-375)||(26909756-26909800)
chr8 (331-375)||(27126841-27126885)
chr8 (145-225)||(26741295-26741381)
chr8 (331-375)||(2612391-2612435)
chr8 (89-225)||(15870803-15870934)
chr8 (331-375)||(15871040-15871084)
chr8 (331-375)||(18405014-18405058)
chr8 (331-375)||(26741489-26741533)
chr8 (331-375)||(35596221-35596265)
chr8 (331-375)||(39585108-39585152)
chr8 (334-375)||(10730152-10730193)
chr8 (334-374)||(1386811-1386851)
chr8 (331-375)||(7990109-7990153)
chr8 (334-374)||(38953163-38953203)
chr8 (333-375)||(37698271-37698313)
chr8 (109-196)||(18404810-18404898)
chr8 (145-187)||(35596387-35596430)
chr8 (331-361)||(6837993-6838023)
chr8 (331-361)||(38993187-38993217)
chr8 (331-361)||(44599212-44599242)
chr8 (334-375)||(41131133-41131174)
chr8 (134-185)||(7990296-7990348)
[»] chr4 (36 HSPs)
chr4 (63-225)||(28185051-28185219)
chr4 (63-225)||(28972951-28973119)
chr4 (63-225)||(6377043-6377210)
chr4 (77-225)||(41235585-41235740)
chr4 (89-225)||(13391118-13391255)
chr4 (77-225)||(51549455-51549604)
chr4 (77-225)||(49269214-49269368)
chr4 (77-187)||(7878580-7878691)
chr4 (77-225)||(34487442-34487591)
chr4 (77-187)||(48080553-48080664)
chr4 (89-225)||(7069327-7069468)
chr4 (77-225)||(1763844-1763995)
chr4 (77-225)||(31845891-31846050)
chr4 (331-375)||(7069576-7069620)
chr4 (331-375)||(7878417-7878461)
chr4 (331-375)||(13391361-13391405)
chr4 (331-375)||(18732829-18732873)
chr4 (331-375)||(28185305-28185349)
chr4 (331-375)||(28972821-28972865)
chr4 (331-375)||(48080784-48080828)
chr4 (331-375)||(55762109-55762153)
chr4 (68-184)||(18732555-18732673)
chr4 (331-375)||(1763693-1763737)
chr4 (331-375)||(34487699-34487743)
chr4 (331-375)||(51549711-51549755)
chr4 (334-375)||(13051387-13051428)
chr4 (331-375)||(36505351-36505395)
chr4 (134-218)||(55826074-55826163)
chr4 (134-217)||(55762267-55762355)
chr4 (331-375)||(11509368-11509413)
chr4 (334-375)||(32352346-32352387)
chr4 (331-375)||(6377317-6377361)
chr4 (331-375)||(49269063-49269107)
chr4 (139-192)||(11509193-11509247)
chr4 (331-361)||(31846156-31846186)
chr4 (331-375)||(42384018-42384062)
[»] chr1 (41 HSPs)
chr1 (63-225)||(31198783-31198951)
chr1 (104-225)||(44745703-44745825)
chr1 (77-218)||(5154126-5154273)
chr1 (141-225)||(36368674-36368759)
chr1 (77-225)||(8223158-8223311)
chr1 (77-225)||(26519876-26520035)
chr1 (69-225)||(21070062-21070223)
chr1 (77-187)||(50579293-50579409)
chr1 (13-59)||(28976880-28976926)
chr1 (104-225)||(34968274-34968391)
chr1 (77-187)||(48814595-48814705)
chr1 (331-375)||(4447487-4447531)
chr1 (331-375)||(5153968-5154012)
chr1 (331-375)||(7026060-7026104)
chr1 (331-375)||(10924011-10924055)
chr1 (331-375)||(13982382-13982426)
chr1 (331-375)||(26003427-26003471)
chr1 (331-375)||(26519725-26519769)
chr1 (331-375)||(31198631-31198675)
chr1 (331-375)||(35825623-35825667)
chr1 (331-375)||(8223007-8223051)
chr1 (139-225)||(29579621-29579713)
chr1 (331-375)||(29579855-29579899)
chr1 (331-375)||(36364727-36364771)
chr1 (331-375)||(38614201-38614245)
chr1 (331-375)||(50579142-50579186)
chr1 (163-217)||(9864816-9864870)
chr1 (331-375)||(34968123-34968168)
chr1 (331-375)||(21069911-21069955)
chr1 (331-375)||(36368856-36368900)
chr1 (334-374)||(42051318-42051358)
chr1 (331-375)||(44745552-44745596)
chr1 (77-164)||(4447243-4447335)
chr1 (63-126)||(13982613-13982680)
chr1 (334-375)||(1356999-1357040)
chr1 (334-375)||(20270918-20270959)
chr1 (89-126)||(38614433-38614470)
chr1 (109-217)||(26003580-26003684)
chr1 (334-374)||(37573623-37573663)
chr1 (77-187)||(35825387-35825503)
chr1 (334-370)||(45072209-45072245)
[»] chr3 (54 HSPs)
chr3 (77-225)||(44906211-44906364)
chr3 (63-225)||(29170461-29170629)
chr3 (63-225)||(29323269-29323437)
chr3 (71-225)||(28986106-28986255)
chr3 (77-225)||(28991088-28991247)
chr3 (77-225)||(18971756-18971910)
chr3 (63-225)||(16341524-16341692)
chr3 (77-225)||(26135532-26135691)
chr3 (77-218)||(31372936-31373082)
chr3 (77-212)||(25630977-25631118)
chr3 (172-225)||(33775050-33775103)
chr3 (331-375)||(18972018-18972062)
chr3 (331-375)||(25630787-25630831)
chr3 (331-375)||(28985952-28985996)
chr3 (331-375)||(28991354-28991398)
chr3 (331-375)||(29323118-29323162)
chr3 (331-375)||(31372779-31372823)
chr3 (331-375)||(45199903-45199947)
chr3 (331-375)||(45200000-45200044)
chr3 (331-375)||(46558770-46558814)
chr3 (331-375)||(50463026-50463070)
chr3 (134-225)||(55140077-55140168)
chr3 (331-375)||(55140275-55140319)
chr3 (63-114)||(24425923-24425974)
chr3 (333-375)||(26135380-26135422)
chr3 (331-375)||(13159131-13159175)
chr3 (331-375)||(24426180-24426224)
chr3 (331-375)||(33774900-33774944)
chr3 (105-225)||(46558921-46559045)
chr3 (63-225)||(38734001-38734166)
chr3 (63-187)||(42591005-42591134)
chr3 (179-225)||(25630939-25630985)
chr3 (145-225)||(45317055-45317141)
chr3 (334-375)||(16341394-16341435)
chr3 (334-375)||(53302753-53302794)
chr3 (334-375)||(53303920-53303961)
chr3 (331-375)||(9145129-9145173)
chr3 (331-375)||(40503118-40503162)
chr3 (63-186)||(40503843-40503972)
chr3 (331-375)||(44906060-44906104)
chr3 (109-184)||(9145299-9145375)
chr3 (63-217)||(42443834-42443994)
chr3 (77-187)||(50463202-50463318)
chr3 (109-225)||(13159282-13159404)
chr3 (334-375)||(37136965-37137006)
chr3 (334-375)||(55010571-55010612)
chr3 (189-225)||(24426036-24426072)
chr3 (178-218)||(45200158-45200198)
chr3 (62-121)||(7956107-7956166)
chr3 (92-126)||(33775132-33775166)
chr3 (337-375)||(42445917-42445955)
chr3 (141-225)||(53302552-53302642)
chr3 (141-225)||(53303719-53303809)
chr3 (346-375)||(29170302-29170331)
[»] chr7 (20 HSPs)
chr7 (77-225)||(8242081-8242229)
chr7 (107-225)||(10361090-10361209)
chr7 (63-225)||(25942402-25942569)
chr7 (62-225)||(32455393-32455567)
chr7 (69-225)||(19347881-19348042)
chr7 (109-225)||(45261340-45261456)
chr7 (331-375)||(13932545-13932589)
chr7 (331-375)||(25942662-25942706)
chr7 (331-375)||(29646854-29646898)
chr7 (333-375)||(8242339-8242381)
chr7 (109-187)||(11910791-11910870)
chr7 (331-375)||(32455673-32455717)
chr7 (331-375)||(45261565-45261609)
chr7 (331-375)||(46510439-46510483)
chr7 (77-187)||(13932695-13932811)
chr7 (77-187)||(29646597-29646713)
chr7 (61-182)||(46510630-46510757)
chr7 (334-375)||(10318670-10318711)
chr7 (331-375)||(10361316-10361360)
chr7 (334-375)||(15976424-15976465)
[»] chr2 (23 HSPs)
chr2 (63-225)||(3587161-3587329)
chr2 (63-225)||(12569435-12569603)
chr2 (77-225)||(42807958-42808112)
chr2 (331-375)||(3237330-3237374)
chr2 (331-375)||(4185458-4185502)
chr2 (331-375)||(9650886-9650930)
chr2 (331-375)||(11706397-11706441)
chr2 (331-375)||(40022094-40022138)
chr2 (331-375)||(3587436-3587480)
chr2 (331-371)||(4158906-4158946)
chr2 (331-375)||(25325012-25325056)
chr2 (331-375)||(26827274-26827318)
chr2 (331-374)||(33907006-33907049)
chr2 (134-225)||(3237485-3237582)
chr2 (334-375)||(45116571-45116612)
chr2 (331-375)||(12569284-12569328)
chr2 (331-375)||(42808219-42808263)
chr2 (163-225)||(4185284-4185351)
chr2 (109-187)||(9651060-9651139)
chr2 (334-375)||(38992290-38992331)
chr2 (334-375)||(44088849-44088890)
chr2 (77-114)||(4158670-4158707)
chr2 (63-114)||(44088484-44088536)
[»] chr6 (13 HSPs)
chr6 (71-200)||(30044087-30044222)
chr6 (104-225)||(34677095-34677223)
chr6 (331-375)||(6862278-6862322)
chr6 (331-375)||(10321235-10321279)
chr6 (331-375)||(15707487-15707531)
chr6 (331-375)||(21038628-21038672)
chr6 (77-185)||(15707247-15707361)
chr6 (331-375)||(2978805-2978849)
chr6 (141-225)||(10321386-10321476)
chr6 (331-375)||(34676943-34676988)
chr6 (62-107)||(2978550-2978595)
chr6 (334-375)||(3106722-3106763)
chr6 (63-112)||(11545929-11545978)
[»] scaffold0024 (2 HSPs)
scaffold0024 (104-225)||(58202-58329)
scaffold0024 (331-375)||(58425-58469)
[»] scaffold0242 (1 HSPs)
scaffold0242 (331-375)||(3911-3955)
[»] chr5 (11 HSPs)
chr5 (331-375)||(10371129-10371173)
chr5 (331-375)||(18405962-18406006)
chr5 (331-375)||(28210646-28210690)
chr5 (331-375)||(34374849-34374893)
chr5 (331-375)||(35540377-35540421)
chr5 (163-225)||(35540229-35540291)
chr5 (77-225)||(18405696-18405854)
chr5 (77-184)||(28210814-28210927)
chr5 (334-375)||(23219677-23219718)
chr5 (334-374)||(6630947-6630987)
chr5 (337-375)||(18256370-18256408)
[»] scaffold0137 (1 HSPs)
scaffold0137 (331-375)||(24492-24536)
[»] scaffold0002 (2 HSPs)
scaffold0002 (331-375)||(147813-147857)
scaffold0002 (109-225)||(147584-147706)
[»] scaffold0125 (1 HSPs)
scaffold0125 (334-375)||(22321-22362)


Alignment Details
Target: scaffold0110 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 49452 - 49620
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcggg-----cctaaaaaactaacnnnnnnntgcattcgggttttttcggcccag 157  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| ||||     ||||||||||||||       |||| ||||| ||||||||||||     
T  49452 tagagctgtcaaaaatgggccggcccattggcccatatttttgggccgggacgggcctaaaaaactaactaaaaaatgcactcggggtttttcggcccaa 49551  T
Q  158 gcccatt-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||| ||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||    
T  49552 gcccatttgggccatacaaaagttgggtcgggctgacccaccgggctttgggccggcccattagcccat 49620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 49706 - 49750
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||    
T  49706 tggatgaatttagtttacagttttaagattttaaaatttataaat 49750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 37698000 - 37698162
Alignment:
Q  64 agagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca- 162  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||       ||||| |||| |||| || ||||  ||||     
T  37698000 agaggtgtcaaaaatgggccggcccattggcccatatttttgggccgggcctaaaaaattaaccaaaaaatgcatccgggcttttccgacccaatcccat 37698099  T
Q  163 ttgggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||| ||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  37698100 ttgggtcataccaaagttgggtcgggctggcccaccggactttgggccggcccattagcccat 37698162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 35917711 - 35917873
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca 162  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| |       |||| |||||||||||| ||||| |||||    
T  35917711 tagagctgtcaaaaatgggctggcccattggcccatatttttaggtcgggcctaaaaaactagcccaaaaatgcactcgggttttttcagcccaagccca 35917810  T
Q  163 t-tgggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    | |||||||||| ||||||||| ||| |||||||| ||||||||| | ||||| ||||||||||    
T  35917811 tatgggccatac-aaagttggggcgggctggcccatcggactttgagacggcctattagcccat 35917873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 39584855 - 39584979
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca 162  Q
    |||||||||||||||||||| ||  ||| |||||||||||||||| |||||||||||||| |||       |||||||||| |||||||||||| |||||    
T  39584855 tagagttgtcaaaaatgggctggtccatcggcccatatttttgggccgggcctaaaaaaccaac-aaaaaatgcattcgggctttttcggcccaagccca 39584953  T
Q  163 -ttgggccatacaaaagttgggccgg 187  Q
     |||||||||||||||||||||||||    
T  39584954 tttgggccatacaaaagttgggccgg 39584979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 27126598 - 27126709
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggccatacaa 175  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||       |||  |||||||||||||||||| ||||| |||||||| ||||    
T  27126598 atgggccggcccattggctcatatttttgggtcgggcctaaaaaactaaccaaaaaatgcgctcgggttttttcggcccaagcccatttgggccagacaa 27126697  T
Q  176 aagttgggccgg 187  Q
    ||||||||||||    
T  27126698 aagttgggccgg 27126709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 77 - 225
Target Start/End: Complemental strand, 2612697 - 2612543
Alignment:
Q  77 atgggccggctcattggcccatattttt-----gggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||||| |||||||||||||||||     ||| |||||||||||||||| |       |||| ||||| |||||||||||| ||||||| ||||||    
T  2612697 atgggccggcccattggcccatattttttggccgggccgggcctaaaaaactagccaaaaaatgcactcgggctttttcggcccaagcccatttgggcca 2612598  T
Q  171 tacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    || ||||||||||| || |||||||||||| |||||| |||||||||| ||||||    
T  2612597 taaaaaagttgggctgggctggcccaccgggctttggaccggcccattggcccat 2612543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 6837736 - 6837886
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcggg-----cctaaaaaa-ctaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcc 169  Q
    |||||| ||| |||||||||||||||||||||||||     ||||||||| |||||       |||| ||  | |||||||||||| ||||||| |||||    
T  6837736 atgggctggcccattggcccatatttttgggtcgggtcgggcctaaaaaaactaactaaaaaatgcactcaagctttttcggcccaagcccatttgggcc 6837835  T
Q  170 atacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||||||     || |||||||||||||||||||||||||||||||||    
T  6837836 atacaaaagttgggc-----tgacccaccggactttgggccggcccattagcccat 6837886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 26909800 - 26909756
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26909800 tggatgaatttagcttacagttttaaaattttaaagtttataaat 26909756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 27126841 - 27126885
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  27126841 tggatgaatttagcttacagttttaaaattttaaagtttataaat 27126885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 26741295 - 26741381
Alignment:
Q  145 tttttcggcccaggcccatt-gggccatacaaaagttggg-----ccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||| ||||||| ||| |||||||||||||||     |||| ||||||||||||||||||||||||||||||| |||||    
T  26741295 tttttcggcccaagcccatttgggacatacaaaagttgggtcgggccgggctggcccaccggactttgggccggcccattatcccat 26741381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 2612435 - 2612391
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  2612435 tggatgaatttagcttacagttttaaaattttaaagtttgtaaat 2612391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 15870803 - 15870934
Alignment:
Q  89 attggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggccatacaaaagttgggccgg 187  Q
    ||||||||||||||||||| ||||||||||||||||||       |||| ||||| ||||| ||||||  |||| |||| |||||| |||||||||        
T  15870803 attggcccatatttttgggccgggcctaaaaaactaaccaaaaaatgcactcgggcttttttggcccaaacccatttggaccatac-aaagttggg---- 15870897  T
Q  188 actggcccaccggactttgggccggcccattagcccat 225  Q
     |||||||||||| ||||||||||||  ||||||||||    
T  15870898 -ctggcccaccgggctttgggccggcttattagcccat 15870934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 15871040 - 15871084
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  15871040 tggatgaatttagcttacagttttaaaatttttaagtttataaat 15871084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 18405014 - 18405058
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  18405014 tggatgaatttagcttacaattttaaaattttaaagtttataaat 18405058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 26741489 - 26741533
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  26741489 tggatgaatttagcttacaattttaaaattttaaagtttataaat 26741533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 35596265 - 35596221
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  35596265 tggatgaatttagcttacaattttaaaattttaaagtttataaat 35596221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 39585108 - 39585152
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  39585108 tggatgaatttaacttacagttttaaaattttaaagtttataaat 39585152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 10730152 - 10730193
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  10730152 atgaatttagcttacagttttaaaattttaaactttataaat 10730193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 1386811 - 1386851
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaa 374  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  1386811 atgaatttagcttaaagttttaaaattttaaagtttataaa 1386851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 7990153 - 7990109
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||    
T  7990153 tggatgaatttagcttacagttttaaaattttaaattttttaaat 7990109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 334 - 374
Target Start/End: Complemental strand, 38953203 - 38953163
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaa 374  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  38953203 atgaatttagcttaaagttttaaaattttaaagtttataaa 38953163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 375
Target Start/End: Original strand, 37698271 - 37698313
Alignment:
Q  333 gatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  37698271 gatgaatttagcttacaattttaaaatttgaaagtttataaat 37698313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 109 - 196
Target Start/End: Original strand, 18404810 - 18404898
Alignment:
Q  109 cgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggactggccca 196  Q
    ||||||||||||||||||       |||| || || |||||||||||| ||| ||| ||||||||||||||||||||||| | ||||||    
T  18404810 cgggcctaaaaaactaaccaaaaaatgcactcaggctttttcggcccaagccgatttgggccatacaaaagttgggccgggccggccca 18404898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 35596430 - 35596387
Alignment:
Q  145 tttttcggcccaggccca-ttgggccatacaaaagttgggccgg 187  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  35596430 tttttcggcccaagcccaattgggccatacaaaagttgggccgg 35596387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 361
Target Start/End: Original strand, 6837993 - 6838023
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattt 361  Q
    |||||||||||||||||||||||||||||||    
T  6837993 tggatgaatttagcttacagttttaaaattt 6838023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 361
Target Start/End: Complemental strand, 38993217 - 38993187
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattt 361  Q
    |||||||||||||||||||||||||||||||    
T  38993217 tggatgaatttagcttacagttttaaaattt 38993187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 361
Target Start/End: Complemental strand, 44599242 - 44599212
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattt 361  Q
    |||||||||||||||||||||||||||||||    
T  44599242 tggatgaatttagcttacagttttaaaattt 44599212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 41131174 - 41131133
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  41131174 atgaatttagcttaaagttataaaattttaaattttataaat 41131133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 7990348 - 7990296
Alignment:
Q  134 tgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggcc 185  Q
    |||| ||||| |||||||||||| ||| ||| |||||||||||||||||||||    
T  7990348 tgcactcgggctttttcggcccaagcctatttgggccatacaaaagttgggcc 7990296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 28185051 - 28185219
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttggg-----tcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccag 157  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||      ||||||||||||||||||       |||| ||||| ||||||||||||     
T  28185051 tagagctgtcaaaaatgggccggcccattggcccatatttttgggccggaccgggcctaaaaaactaaccaaaaaatgcactcgggctttttcggcccaa 28185150  T
Q  158 gccca-ttgggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||| |||||||||| |||||||||| ||  |||||||||||| ||||||||||||||||| ||||||    
T  28185151 gcccatttgggccataaaaaagttgggtcgagctggcccaccgggctttgggccggcccattggcccat 28185219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 28973119 - 28972951
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcc-----taaaaaactaacnnnnnnntgcattcgggttttttcggcccag 157  Q
    ||||| ||||||||||||||||||  ||||||||||||||||| | ||||||     ||||||||||||       |||| ||||| ||||||||||||     
T  28973119 tagagctgtcaaaaatgggccggcctattggcccatatttttgagccgggccggacctaaaaaactaaccaaaaaatgcactcggggtttttcggcccaa 28973020  T
Q  158 gcccatt-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||| ||||||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||    
T  28973019 gcccatttgggccatacaaaagttgggtcgggctgacccaccgggctttgggccggcccattagcccat 28972951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 6377043 - 6377210
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcc-----taaaaaactaacnnnnnnntgcattcgggttttttcggcccag 157  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| ||||||     ||||||||||||       |||| ||||| ||||||||||||     
T  6377043 tagagctgtcaaaaatggaccggctcattggcccatatttttgggccgggccgggcctaaaaaactaacaaaaaa-tgcactcgggctttttcggcccaa 6377141  T
Q  158 gcccatt-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||| |||||||| |||||||||||||| || ||||| ||| ||||||||||||||||| ||||||    
T  6377142 gcccatttgggccataaaaaagttgggccgggctagcccaacgggctttgggccggcccattggcccat 6377210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 41235585 - 41235740
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcggg-----cctaaaaaactaacnnnnnnntgcattcgggttttttc-ggcccaggcccatt-gggcc 169  Q
    |||||||||| ||||||| |||||||||||| ||||     ||||||||||||||       || | |||||||||||| |||||| ||||||| |||||    
T  41235585 atgggccggcccattggctcatatttttgggccgggttgggcctaaaaaactaacaaaaaaatgtactcgggttttttccggcccaagcccatttgggcc 41235684  T
Q  170 atacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||||||||    
T  41235685 atacaaaagttgggccgggctggtccactggactttgggccggcccattagcccat 41235740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 13391118 - 13391255
Alignment:
Q  89 attggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccgg 187  Q
    ||||||||||||||||||| |||||||||||||||||        |||| ||||| ||||| |||||| ||||||| ||||||||||||| |||||||||    
T  13391118 attggcccatatttttgggccgggcctaaaaaactaatgaaaaaatgcactcgggcttttttggcccaagcccatttgggccatacaaaaattgggccgg 13391217  T
Q  188 actggcccaccggactttgggccggcccattagcccat 225  Q
     | |||||||| | ||||||||||||||||| ||||||    
T  13391218 gccggcccaccaggctttgggccggcccattggcccat 13391255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 51549455 - 51549604
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggccatacaa 175  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||       ||||   ||| |||| |||||||  |||| |||||||||||||    
T  51549455 atgggccggtccattggcccatatttttgggtcgggcctaaaaaactaacaaaaaaatgcacctgggcttttacggcccaatcccatttgggccatacaa 51549554  T
Q  176 aagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||| ||| | |||||||||| ||||||||||| ||||| ||||||    
T  51549555 aagttgggtcggcccggcccaccgggctttgggccggtccattggcccat 51549604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 77 - 225
Target Start/End: Complemental strand, 49269368 - 49269214
Alignment:
Q  77 atgggccggctcattggcccatatttttg-----ggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||||  ||||||||||||||||||     ||| |||||||||||||||||       ||   ||||| |||||||||||| ||||||| ||||||    
T  49269368 atgggccggtccattggcccatatttttgagccgggttgggcctaaaaaactaaccaaaaaatgtgctcgggctttttcggcccaagcccatttgggcca 49269269  T
Q  171 tacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
     |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  49269268 gacaaaagttgggccgggctggcccaccgggctttgggccggcccattggcccat 49269214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 7878691 - 7878580
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggccatacaa 175  Q
    |||||| ||| |||||||||||||||||||| ||||||||||||||||||       || | ||||| |||||||||||| ||||| |||||||||||||    
T  7878691 atgggctggcccattggcccatatttttgggccgggcctaaaaaactaaccaaaaaatgaactcgggctttttcggcccaagcccatttgggccatacaa 7878592  T
Q  176 aagttgggccgg 187  Q
    ||||||||||||    
T  7878591 aagttgggccgg 7878580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 34487442 - 34487591
Alignment:
Q  77 atgggccggctcattggcccatatttttgg-----gtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||||| |||||||||||||||||||     | ||||||||||||||||||       |||| ||||| ||||| |||||| ||||||| ||||||    
T  34487442 atgggccggcccattggcccatatttttggaccgggccgggcctaaaaaactaacgaaaaaatgcactcgggcttttttggcccaagcccatttgggcca 34487541  T
Q  171 tacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||||     | |||||||||||||||||||||||||||| ||||||    
T  34487542 tacaaaagttggg-----cgggcccaccggactttgggccggcccattggcccat 34487591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 48080553 - 48080664
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggccatacaa 175  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||       |||  ||||| |||||| ||||| ||||| |||||| | ||||    
T  48080553 atgggccggcccattggcccatatttttgggtcgggcctaaaaaactaaccaaaaaatgcgctcgggctttttcagcccaagcccatttgggctagacaa 48080652  T
Q  176 aagttgggccgg 187  Q
    ||||||||||||    
T  48080653 aagttgggccgg 48080664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 7069327 - 7069468
Alignment:
Q  89 attggcccatatttttggg-----tcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgg 182  Q
    |||||||||||||||||||     |||||||||||||||||||       |||| ||||| |||||||||||| ||||||| |||||||| |||||||||    
T  7069327 attggcccatatttttgggccgggtcgggcctaaaaaactaaccaaaaa-tgcactcgggctttttcggcccaagcccatttgggccataaaaaagttgg 7069425  T
Q  183 gccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||  |||| ||||||| |||||||||||| |||| ||||||    
T  7069426 gccgagctgggccaccgggctttgggccggcacattggcccat 7069468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 225
Target Start/End: Complemental strand, 1763995 - 1763844
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggccatacaa 175  Q
    |||||||||| |||| ||||||||||||||| |||| |||||||||||||       |||| ||||| |||||||||||| ||||| |||||||||| ||    
T  1763995 atgggccggcccattagcccatatttttgggccgggactaaaaaactaac-caaaaatgcactcgggctttttcggcccaagcccatttgggccataaaa 1763897  T
Q  176 aagttgggccggac----tggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||| |    |||||||||||  ||| |||||||||||| ||||||    
T  1763896 aagttgggccgggcctggtggcccaccgg-gttttggccggcccattggcccat 1763844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 31845891 - 31846050
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcc-----taaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    ||||||| || ||||| |||||||||||||||||||||     ||||||||||||       |||  ||||| |||||||||||| ||||||| ||||||    
T  31845891 atgggccagcccattgacccatatttttgggtcgggccgggcctaaaaaactaacaaaaaaatgcgctcgggctttttcggcccaagcccatttgggcca 31845990  T
Q  171 tacaaaagttgggccggac-----tggcccaccggactttgggccggcccattagcccat 225  Q
     |||||||||||||||| |     ||||||||||| ||||||||||||||||| ||||||    
T  31845991 gacaaaagttgggccgggccgggctggcccaccgggctttgggccggcccattggcccat 31846050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 7069576 - 7069620
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7069576 tggatgaatttagcttacagttttaaaattttaaagtttataaat 7069620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 7878461 - 7878417
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7878461 tggatgaatttagcttacagttttaaaattttaaagtttataaat 7878417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 13391361 - 13391405
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  13391361 tggatgaatttagcttacagttttaaaattttaaagtttataaat 13391405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 18732829 - 18732873
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18732829 tggatgaatttagcttacagttttaaaattttaaagtttataaat 18732873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 28185305 - 28185349
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28185305 tggatgaatttagcttacagttttaaaattttaaagtttataaat 28185349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 28972865 - 28972821
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28972865 tggatgaatttagcttacagttttaaaattttaaagtttataaat 28972821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 48080784 - 48080828
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  48080784 tggatgaatttagcttacagttttaaaattttaaagtttataaat 48080828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 55762153 - 55762109
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  55762153 tggatgaatttagcttacagttttaaaattttaaagtttataaat 55762109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 18732555 - 18732673
Alignment:
Q  68 ttgtcaaaaatgggccgg-ctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttg 165  Q
    |||||||||||||| ||| ||||| |||||||||||||| |||||| ||||||||  |||       | |||||||| |||||||||||| ||||| |||    
T  18732555 ttgtcaaaaatgggtcgggctcatgggcccatatttttgtgtcgggtctaaaaaataaaccaaaaaatacattcgggctttttcggcccaagcccatttg 18732654  T
Q  166 ggccatacaaaagttgggc 184  Q
    |||||||||||| ||||||    
T  18732655 ggccatacaaaaattgggc 18732673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 1763737 - 1763693
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  1763737 tggatgagtttagcttacagttttaaaattttaaagtttataaat 1763693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 34487699 - 34487743
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  34487699 tggatgaatttagattacagttttaaaattttaaagtttataaat 34487743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 51549711 - 51549755
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  51549711 tggatgaatttagcttatagttttaaaattttaaagtttataaat 51549755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 13051428 - 13051387
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  13051428 atgaatttagcttaaagttttaaaattttaaagtttataaat 13051387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 36505395 - 36505351
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||    
T  36505395 tggatgaatttagcttagagttttaaaattttaatgtttataaat 36505351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 55826163 - 55826074
Alignment:
Q  134 tgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggac----tggcccaccggactttgggccggcccatt 218  Q
    |||| ||||| |||||||||||| ||||||| |||||||| |||||||||||||| |    ||||||||||  |||||||||||||||||    
T  55826163 tgcactcgggctttttcggcccaagcccatttgggccataaaaaagttgggccgggcgggctggcccaccgagctttgggccggcccatt 55826074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 55762355 - 55762267
Alignment:
Q  134 tgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggac----tggcccaccggactttgggccggcccat 217  Q
    |||| ||||| |||||||||||| ||||||| |||||||| |||||||||||||| |    ||||||||||  ||||||||||||||||    
T  55762355 tgcactcgggctttttcggcccaagcccatttgggccataaaaaagttgggccgggcgggctggcccaccgagctttgggccggcccat 55762267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 11509368 - 11509413
Alignment:
Q  331 tggatgaatttagcttacagttttaaaa-ttttaaagtttataaat 375  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||    
T  11509368 tggaagaatttagcttacagttttaaaatttttaaagtttataaat 11509413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 32352387 - 32352346
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  32352387 atgaatttagcttaaagttttaaaattttacagtttataaat 32352346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 6377317 - 6377361
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||| |||||| || ||||||||||||||||||||||||||||||    
T  6377317 tggacgaatttggcgtacagttttaaaattttaaagtttataaat 6377361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 49269107 - 49269063
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||    
T  49269107 tggatgaatttagcttaccattttaaatttttaaagtttataaat 49269063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 11509193 - 11509247
Alignment:
Q  139 tcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggactgg 192  Q
    ||||| ||||| |||||| ||||||| ||||||||||||||||||||||| ||||    
T  11509193 tcgggcttttttggcccaagcccatttgggccatacaaaagttgggccgggctgg 11509247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 361
Target Start/End: Original strand, 31846156 - 31846186
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattt 361  Q
    |||||||||||||||||||||||||||||||    
T  31846156 tggatgaatttagcttacagttttaaaattt 31846186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 42384062 - 42384018
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||| | |||||||||||||||  ||||||||    
T  42384062 tggatgaatttagcttataattttaaaattttaaaacttataaat 42384018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 31198951 - 31198783
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca 162  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||       |||| |||||||||||||||||| |||||    
T  31198951 tagagctgtcaaaaatgggccggcacattggcccatatttttgggccgggcctaaaaaactaacaaaaaaatgcactcgggttttttcggcccaagccca 31198852  T
Q  163 -ttgggccatacaaaa-----gttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
     |||||||||| ||||     |||||||||| ||||||| |||| |||||| | |||||||| ||||||    
T  31198851 tttgggccataaaaaagttgggttgggccgggctggcccgccgggctttggcctggcccattggcccat 31198783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 44745825 - 44745703
Alignment:
Q  104 tgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggactggcccaccggac 202  Q
    |||| ||||||||||||||||||       |||| ||||| |||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  44745825 tgggccgggcctaaaaaactaaccaaaaaatgcactcgggctttttcggcccaagcccatttgggccatacaaaagttgagtcggactggcccaccggac 44745726  T
Q  203 tttgggccggcccattagcccat 225  Q
    |||||||||||||||||||||||    
T  44745725 tttgggccggcccattagcccat 44745703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 77 - 218
Target Start/End: Complemental strand, 5154273 - 5154126
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggccatacaa 175  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||       |||  ||||| |||||||||||| ||||| |||||||| ||||    
T  5154273 atgggccggcccattggcccatatttttgggccgggcctaaaaaactaacaaaaaaatgcgctcgggctttttcggcccaagcccatttgggccagacaa 5154174  T
Q  176 aagtt-----gggccggactggcccaccggactttgggccggcccatt 218  Q
    |||||     ||||||| |||||||||||| |||||||||||||||||    
T  5154173 aagttgggccgggccgggctggcccaccgggctttgggccggcccatt 5154126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 36368674 - 36368759
Alignment:
Q  141 gggttttttcggcccaggcccatt-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  36368674 gggttttttcggcccaagcccatttgggccatacaaaggttgggccgggctggcccatcgggctttgggccggcccattagcccat 36368759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 77 - 225
Target Start/End: Complemental strand, 8223311 - 8223158
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggccatacaa 175  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||        ||| | ||| |||||||||||| ||||| || ||||||||||    
T  8223311 atgggccggcacattggcccatatttttgggccgggcctaaaaaactaacaaaaaac-gcacttgggctttttcggcccaagcccattttggccatacaa 8223213  T
Q  176 aagttg-----ggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||     |||| | |||||||||||  ||||||||||||||||||||||||    
T  8223212 aagttgggctaggccaggctggcccaccgagctttgggccggcccattagcccat 8223158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 225
Target Start/End: Complemental strand, 26520035 - 26519876
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcc-----taaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||||| |||||||||||||||||||| ||||||     ||||||||||||       |||  ||||| |||||||||||| ||||||| ||||||    
T  26520035 atgggccggcccattggcccatatttttgggccgggccgggcctaaaaaactaaccaaaaaatgcgctcgggctttttcggcccaagcccatttgggcca 26519936  T
Q  171 tacaaaagttgggccggac-----tggcccaccggactttgggccggcccattagcccat 225  Q
     |||||||||||||||| |     ||||||||||| ||||||||||||||||| ||||||    
T  26519935 gacaaaagttgggccgggccgggctggcccaccgggctttgggccggcccattggcccat 26519876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 225
Target Start/End: Complemental strand, 21070223 - 21070062
Alignment:
Q  69 tgtcaaaaatgggccggctcattggcccatatttttgggtcgggcc-----taaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccat 163  Q
    ||||||||||||| |||| ||||| |||||||||||| ||||||||     |||||||||||        ||||  |||| |||||| ||||| ||||||    
T  21070223 tgtcaaaaatgggtcggcccattgacccatatttttgagtcgggccgggcctaaaaaactaatcaaaaaatgcacccgggctttttcagcccaagcccat 21070124  T
Q  164 t-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    | |||||||||||| |||||| ||| |||||||||||| |||||||| |||||||||||||||    
T  21070123 ttgggccatacaaa-gttggggcgggctggcccaccgggctttgggctggcccattagcccat 21070062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 50579409 - 50579293
Alignment:
Q  77 atgggccggctcattggcccatatttttggg-----tcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||||| ||||||||||||||||||||     ||||||||||||||||||        |||| ||||||||||| |||||| ||||||| ||||||    
T  50579409 atgggccggcccattggcccatatttttgggccggatcgggcctaaaaaactaataaaaaaatgcactcgggtttttttggcccaagcccatttgggcca 50579310  T
Q  171 tacaaaagttgggccgg 187  Q
    |||||||||||||||||    
T  50579309 tacaaaagttgggccgg 50579293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 28976880 - 28976926
Alignment:
Q  13 aatataaggaacttattgtgaattacggttattaaaaattctatcat 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28976880 aatataaggaacttattgtgaattacggttattaaaaattctatcat 28976926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 34968391 - 34968274
Alignment:
Q  104 tgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggccatacaaaagttgggccggactggcccaccggac 202  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||| ||||| |||||||||||||||||||||      ||| ||||| | |    
T  34968391 tgggtcgggcctaaaaaactaacaaaaaaatgcactcgggctttttcggcccaagcccatttgggccatacaaaagttggg-----ttggaccaccaggc 34968297  T
Q  203 tttgggccggcccattagcccat 225  Q
    |||||||||||||||||||||||    
T  34968296 tttgggccggcccattagcccat 34968274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 48814705 - 48814595
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaa 175  Q
    |||||||||| ||| |||| ||||||||||| |||||||| |||||||||       |||| ||||| |||||||||||| ||||||| |||||||||||    
T  48814705 atgggccggcccatgggcctatatttttgggccgggcctataaaactaaccaaaaa-tgcactcgggctttttcggcccaagcccatttgggccatacaa 48814607  T
Q  176 aagttgggccgg 187  Q
    ||||||||||||    
T  48814606 aagttgggccgg 48814595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 4447487 - 4447531
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  4447487 tggatgaatttagcttacagttttaaaattttaaagtttataaat 4447531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 5154012 - 5153968
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  5154012 tggatgaatttagcttacagttttaaaattttaaagtttataaat 5153968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 7026060 - 7026104
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7026060 tggatgaatttagcttacagttttaaaattttaaagtttataaat 7026104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 10924011 - 10924055
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10924011 tggatgaatttagcttacagttttaaaattttaaagtttataaat 10924055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 13982426 - 13982382
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  13982426 tggatgaatttagcttacagttttaaaattttaaagtttataaat 13982382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 26003471 - 26003427
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26003471 tggatgaatttagcttacagttttaaaattttaaagtttataaat 26003427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 26519769 - 26519725
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26519769 tggatgaatttagcttacagttttaaaattttaaagtttataaat 26519725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 31198675 - 31198631
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31198675 tggatgaatttagcttacagttttaaaattttaaagtttataaat 31198631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 35825623 - 35825667
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35825623 tggatgaatttagcttacagttttaaaattttaaagtttataaat 35825667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 8223051 - 8223007
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  8223051 tggatgaatttaacttacagttttaaaattttaaagtttataaat 8223007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 29579621 - 29579713
Alignment:
Q  139 tcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggac-----tggcccaccggactttgggccggcccattagcccat 225  Q
    ||||| |||||||||||| ||||||| |||||| |||||||||||||||| |     ||||||||||| ||||||||||||||||| ||||||    
T  29579621 tcgggctttttcggcccaagcccatttgggccagacaaaagttgggccgggcggggctggcccaccgggctttgggccggcccattggcccat 29579713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 29579855 - 29579899
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  29579855 tggattaatttagcttacagttttaaaattttaaagtttataaat 29579899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 36364727 - 36364771
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  36364727 tggatgaatttagcttacaattttaaaattttaaagtttataaat 36364771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 38614245 - 38614201
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  38614245 tggatgaatttagcttatagttttaaaattttaaagtttataaat 38614201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 50579186 - 50579142
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  50579186 tggatgaatttagcttacagttttaaaattttaaagtttacaaat 50579142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 9864816 - 9864870
Alignment:
Q  163 ttgggccatacaaaagttgggccggactggcccaccggactttgggccggcccat 217  Q
    |||| ||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  9864816 ttggcccatacaaaagttggtctggactgacccaccggactttgggccggcccat 9864870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 34968168 - 34968123
Alignment:
Q  331 tggatgaatttagcttaca-gttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  34968168 tggatgaatttagcttacaagttttaaaattttaaagtttataaat 34968123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 21069955 - 21069911
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  21069955 tggatgaatttagcttacaattttaaaatttgaaagtttataaat 21069911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 36368856 - 36368900
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  36368856 tggatgaatttagcttacaattttaaaatttgaaagtttataaat 36368900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 334 - 374
Target Start/End: Complemental strand, 42051358 - 42051318
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaa 374  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  42051358 atgaatttagcttaaagttttaaaattttaaagtttataaa 42051318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 44745596 - 44745552
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  44745596 tggatgaatttagcttgcagtttttaaattttaaagtttataaat 44745552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 4447243 - 4447335
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcggg-----cctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt 164  Q
    ||||||||||||||||||||||||||||||||||||     ||||||||||||||       |||| ||||| ||||||| |||| |||||||    
T  4447243 atgggccggctcattggcccatatttttgggtcgggacgggcctaaaaaactaaccaaaaaatgcactcgggctttttcgacccaagcccatt 4447335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 13982680 - 13982613
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttggg----tcgggcctaaaaaactaac 126  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||     |||||||||||||||||||    
T  13982680 tagagctgtcaaaaatgggctggcccattggcccatatttttggacagttcgggcctaaaaaactaac 13982613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 1356999 - 1357040
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  1356999 atgaatttagtttaaagttttaaaattttaaagtttataaat 1357040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 20270959 - 20270918
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  20270959 atgaatttaacttaaagttttaaaattttaaagtttataaat 20270918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 38614470 - 38614433
Alignment:
Q  89 attggcccatatttttgggtcgggcctaaaaaactaac 126  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  38614470 attggcccatatttttgggtcgggcttaaaaaactaac 38614433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 26003684 - 26003580
Alignment:
Q  109 cgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccattggg-ccatacaaaagttgggccggactggcccaccggactttgg 207  Q
    ||||||||||||||||||       |||| ||||| ||||| |||||| ||||||| || |||||||||| ||||||     ||||||||||| ||||||    
T  26003684 cgggcctaaaaaactaacgaaaaaatgcactcgggcttttttggcccaagcccatttggaccatacaaaaattgggc-----tggcccaccgggctttgg 26003590  T
Q  208 gccggcccat 217  Q
    ||||||||||    
T  26003589 gccggcccat 26003580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 37573623 - 37573663
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaa 374  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  37573623 atgaatttaccttaaagttttaaaattttaaagtttataaa 37573663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 35825387 - 35825503
Alignment:
Q  77 atgggccggctcattggcccatattttt-----gggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggcca 170  Q
    |||||||||| |||||||||||||||||     ||| ||||||||||||||||||       |||  ||||| ||||| |||||| ||||| ||||||||    
T  35825387 atgggccggcccattggcccatatttttgggccgggccgggcctaaaaaactaaccaaaaaatgcgctcgggcttttttggcccaagcccatttgggcca 35825486  T
Q  171 tacaaaagttgggccgg 187  Q
     |||||||| |||||||    
T  35825487 gacaaaagtagggccgg 35825503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 45072209 - 45072245
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagttta 370  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  45072209 atgaatttaacttaaagttttaaaattttaaagttta 45072245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 7e-31; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 77 - 225
Target Start/End: Complemental strand, 44906364 - 44906211
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaa 175  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||||       |||| |||||  ||||||||||| ||||||| |||||||||||    
T  44906364 atgggccggcccattgacccatatttttgggccgggcctaaaaaactaaccaaaaa-tgcactcgggaattttcggcccaagcccatttgggccatacaa 44906266  T
Q  176 aagttgggccggac-----tggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||| |     ||||||||||||||||||||||||||||||||||||    
T  44906265 aagttgggccgggccgggctggcccaccggactttgggccggcccattagcccat 44906211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 29170629 - 29170461
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcc-----taaaaaactaacnnnnnnntgcattcgggttttttcggcccag 157  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||| ||||||     ||||||||||||       |||| ||||| ||||| ||| ||     
T  29170629 tagagctgttaaaaatgggccggcccattggcccatatttttgggccgggccgggcctaaaaaactaaccaaaaaatgcactcgggcttttttggcacaa 29170530  T
Q  158 gcccatt-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||| ||||||||||    
T  29170529 gcccatttgggccatacaaaagttgggccgggctgccccaccgggctttgggccggcctattagcccat 29170461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 29323437 - 29323269
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca 162  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||        |||  ||||| |||||||||||| |||||    
T  29323437 tagagctgtcaaaaatgggccggcccattggcccatatttttgggccgggcctaaaaaactaataaaaaaatgcgctcgggctttttcggcccaagccca 29323338  T
Q  163 -ttgggccatacaaaagtt-----gggccggactggcccaccggactttgggccggcccattagcccat 225  Q
     |||||||| |||||||||     ||||||| ||||||||| || ||||||||||||||||| ||||||    
T  29323337 tttgggccagacaaaagttgggccgggccgggctggcccactgggctttgggccggcccattggcccat 29323269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 28986255 - 28986106
Alignment:
Q  71 tcaaaaatgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcc 169  Q
    |||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||       |||| ||||| ||||| |||||| ||||||| |||||    
T  28986255 tcaaaaatgggccggtccattggcccatatttt-gggccgggcctaaaaaactaacgaaaaaatgcactcgggcttttttggcccaagcccatttgggcc 28986157  T
Q  170 atacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||||||     ||||||| ||| ||||||||||||||||| ||||||    
T  28986156 atacaaaagttgggc-----tggcccatcgggctttgggccggcccattggcccat 28986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 28991088 - 28991247
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcc-----taaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||||| |||||||||||||||||||||||||||     ||||||||||||       |||  ||||| |||||||||||| ||||||| ||||||    
T  28991088 atgggccggcccattggcccatatttttgggtcgggccgggcctaaaaaactaacaaaaaaatgcgctcgggctttttcggcccaagcccatttgggcca 28991187  T
Q  171 tacaaaagttgggccggac-----tggcccaccggactttgggccggcccattagcccat 225  Q
     |||||||||||||||| |     ||||||||||| ||||||||||||||||| ||||||    
T  28991188 gacaaaagttgggccgggccgggctggcccaccgggctttgggccggcccattggcccat 28991247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 18971756 - 18971910
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgg-----gcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||||| ||||| ||||||||||||||||||     ||||||||||||||        |||| ||||| | ||| |||| | ||||||| ||||||    
T  18971756 atgggccggcccattgacccatatttttgggtcggtccgggcctaaaaaactaatcaaaatatgcactcgggctgttttggcctaagcccatttgggcca 18971855  T
Q  171 tacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||    
T  18971856 tacaaaagttgggccgggctggcccaccgagctttgggtcggcccattagcccat 18971910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 16341692 - 16341524
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcc-----taaaaaactaacnnnnnnntgcattcgggttttttcggcccag 157  Q
    ||||| ||||||||||||||| || |||||| |||| |||||||| ||| ||     ||||||||||||       |||| ||||| ||||||||||||     
T  16341692 tagagctgtcaaaaatgggccagcccattgggccatgtttttgggccggaccggacctaaaaaactaaccaaaaactgcactcggggtttttcggcccaa 16341593  T
Q  158 gcccatt-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |  |||| |||||||||||||||||| |||| |||||||||||  ||||||||||||| ||||||||||    
T  16341592 gttcatttgggccatacaaaagttggcccgggctggcccaccgagctttgggccggcctattagcccat 16341524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 225
Target Start/End: Complemental strand, 26135691 - 26135532
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcggg-----cctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||||| |||||||||||||||||||||||||     ||||||||||||||       || | ||||| |||||||||||| ||||||| |||||     
T  26135691 atgggccggcccattggcccatatttttgggtcgggtcgggcctaaaaaactaaccaaaaaatgaaatcgggctttttcggcccaagcccatttgggccg 26135592  T
Q  171 tacaaaagttggg-----ccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||||     ||||||||| |||| || |||| |||||||||||||||||||    
T  26135591 tacaaaagttgggtcgggccggactggtccactgggctttaggccggcccattagcccat 26135532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 218
Target Start/End: Complemental strand, 31373082 - 31372936
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggccatacaa 175  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||||       |||| ||| | |||||||||||| ||||| |||||||||| ||    
T  31373082 atgggccggcccattg-cccatatttttgggccgggcctaaaaaactaaccaaaaaatgcactcgagctttttcggcccaagcccatttgggccataaaa 31372984  T
Q  176 aagtt-----gggccggactggcccaccggactttgggccggcccatt 218  Q
    |||||     |||||||||||||||| ||  |||||||||||||||||    
T  31372983 aagttgggtcgggccggactggcccatcgagctttgggccggcccatt 31372936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 212
Target Start/End: Complemental strand, 25631118 - 25630977
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcct------aaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcc 169  Q
    |||||||||| |||||||||||||||||||| ||||||       |||||||||||       |||| ||||| ||||| |||||| ||||||| |||||    
T  25631118 atgggccggcccattggcccatatttttgggccgggccgggcctaaaaaaactaacgaaaaa-tgcactcgggcttttttggcccaagcccatttgggcc 25631020  T
Q  170 atacaaaagttgggccggactggcccaccggactttgggccgg 212  Q
     ||||||||||||||||| |||||||||||| |||||||||||    
T  25631019 ttacaaaagttgggccgggctggcccaccgggctttgggccgg 25630977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 33775103 - 33775050
Alignment:
Q  172 acaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  33775103 acaaaagttgggccgggctggcccaccgggctttgggccggcccattagcccat 33775050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 18972018 - 18972062
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18972018 tggatgaatttagcttacagttttaaaattttaaagtttataaat 18972062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 25630831 - 25630787
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25630831 tggatgaatttagcttacagttttaaaattttaaagtttataaat 25630787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 28985996 - 28985952
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28985996 tggatgaatttagcttacagttttaaaattttaaagtttataaat 28985952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 28991354 - 28991398
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28991354 tggatgaatttagcttacagttttaaaattttaaagtttataaat 28991398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 29323162 - 29323118
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29323162 tggatgaatttagcttacagttttaaaattttaaagtttataaat 29323118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 31372823 - 31372779
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31372823 tggatgaatttagcttacagttttaaaattttaaagtttataaat 31372779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 45199947 - 45199903
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  45199947 tggatgaatttagcttacagttttaaaattttaaagtttataaat 45199903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 45200044 - 45200000
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  45200044 tggatgaatttagcttacagttttaaaattttaaagtttataaat 45200000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 46558814 - 46558770
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  46558814 tggatgaatttagcttacagttttaaaattttaaagtttataaat 46558770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 50463070 - 50463026
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  50463070 tggatgaatttagcttacagttttaaaattttaaagtttataaat 50463026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 55140077 - 55140168
Alignment:
Q  134 tgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||| ||||| |||||||||||| ||||||| |||||||||||| |||||||||| |||||||| ||||||||| | |||||||||| |||||    
T  55140077 tgcactcgggctttttcggcccaagcccatttgggccatacaaa-gttgggccgggctggcccatcggactttgtgtcggcccattaacccat 55140168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 55140275 - 55140319
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  55140275 tggatgaatttagcttacagttttaaaattttaaagtttataaat 55140319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 24425923 - 24425974
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcc 114  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  24425923 tagagctgtcaaaaatgggccggcccattggcccatatttttgggtcgggcc 24425974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 333 - 375
Target Start/End: Complemental strand, 26135422 - 26135380
Alignment:
Q  333 gatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26135422 gatgaatttagcttacagttttaaaattttaaagtttataaat 26135380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 13159175 - 13159131
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  13159175 tggatgaatttagcttacggttttaaaattttaaagtttataaat 13159131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 24426180 - 24426224
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  24426180 tggatgaatttagcttatagttttaaaattttaaagtttataaat 24426224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 33774944 - 33774900
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  33774944 tggatgaatttagcttacagatttaaaattttaaagtttataaat 33774900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 46559045 - 46558921
Alignment:
Q  105 gggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggac-----tggcccacc 198  Q
    ||||||||||||||||||||||       |||| ||||||||||||| |||| | ||||| |||||||| |||||||||||||| |     ||||||| |    
T  46559045 gggtcgggcctaaaaaactaacaaaaa--tgcactcgggttttttcgacccaagtccatttgggccatataaaagttgggccgggccaggctggcccatc 46558948  T
Q  199 ggactttgggccggcccattagcccat 225  Q
    || ||||||||||||||||||||||||    
T  46558947 gggctttgggccggcccattagcccat 46558921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 38734166 - 38734001
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca 162  Q
    ||||| |||| |||||||| |||| |||||||||||||||||||   ||| |||||||||||||        ||| |||||||||| | |||||  ||||    
T  38734166 tagagctgtcgaaaatgggacggcccattggcccatatttttggtctgggtctaaaaaactaacaaaaag--gcactcgggttttt-cagcccaaaccca 38734070  T
Q  163 tt-gggccatacaaaagttgggccggac-----tggcccaccggactttgggccggcccattagcccat 225  Q
    || |||||||||||||||||||| ||||     ||| ||||||| ||||||||||||||||||| ||||    
T  38734069 tttgggccatacaaaagttgggctggaccgggctggaccaccgggctttgggccggcccattagtccat 38734001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 42591005 - 42591134
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcct------aaaaaactaacnnnnnnntgcattcgggttttttcggccca 156  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||       |||||||||||        ||| ||||| |||||||||||     
T  42591005 tagaggtgtcaaaaatgggccggcccattggcccatattgttgggtcgggccggacctaaaaaaactaaccaaaac--gcactcgggctttttcggcccg 42591102  T
Q  157 ggcccatt-gggccatacaaaagttgggccgg 187  Q
     ||||||| |||||||||||||||||||||||    
T  42591103 agcccatttgggccatacaaaagttgggccgg 42591134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 25630985 - 25630939
Alignment:
Q  179 ttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  25630985 ttgggccgggctggcccaccgggctttgggccggcccattagcccat 25630939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 45317141 - 45317055
Alignment:
Q  145 tttttcggcccaggcccat-tgggccatacaaaagttgggccggac-----tggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||| | |||||| |||||||||||||||||||||||| |     ||| ||||||| ||||||||||||||||||||||||    
T  45317141 tttttcggcctaagcccatatgggccatacaaaagttgggccgggccgggttgggccaccgggctttgggccggcccattagcccat 45317055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 16341435 - 16341394
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  16341435 atgaatttagcttacacttttaaaattttaaagtttataaat 16341394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 53302753 - 53302794
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  53302753 atgaatttagcttaaagttttaaaattttaaagtttataaat 53302794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 53303920 - 53303961
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  53303920 atgaatttagcttaaagttttaaaattttaaagtttataaat 53303961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 9145173 - 9145129
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||    
T  9145173 tggatgaatttagcttagagttttaaaattttgaagtttataaat 9145129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 40503162 - 40503118
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||    
T  40503162 tggatgaatttagctaacaattttaaaattttaaagtttataaat 40503118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 40503972 - 40503843
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcggg-----cctaaaaaactaacnnnnnnntgcattcgggttttttcggcccag 157  Q
    ||||| |||||||||||||| | | |||||||||||||||||||| ||||     |||| ||||| |||       |||| ||||  ||||||||||||     
T  40503972 tagagctgtcaaaaatgggctgacccattggcccatatttttgggccgggccggacctagaaaaccaaccaaaaaatgcactcggactttttcggcccaa 40503873  T
Q  158 gccca-ttgggccatacaaaagttgggccg 186  Q
    ||||| ||||||||||||||||||||||||    
T  40503872 gcccatttgggccatacaaaagttgggccg 40503843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 44906104 - 44906060
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||    
T  44906104 tggatgaatctagcttacaattttaaaattttaaagtttataaat 44906060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 9145375 - 9145299
Alignment:
Q  109 cgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggc 184  Q
    ||||||||||||||||||       |||| || || |||||||||||||||||||| ||||||||||||||||||||    
T  9145375 cgggcctaaaaaactaaccaaaaaatgcactcaggctttttcggcccaggcccatttgggccatacaaaagttgggc 9145299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 217
Target Start/End: Original strand, 42443834 - 42443994
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgg-----gtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccag 157  Q
    ||||| |||| ||||||||||||  ||||| ||||| |||||||     |||||||||||||||||| |       |||| ||||| ||||| ||||||     
T  42443834 tagagctgtcgaaaatgggccggtccattgacccatgtttttggaccgggtcgggcctaaaaaactaccccaaaaatgcactcgggcttttttggcccaa 42443933  T
Q  158 gcccatt-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccat 217  Q
    || |||| |||||||||||||||||||| ||  ||| |||||||  ||||||||| |||||    
T  42443934 gcacatttgggccatacaaaagttgggctgggttgggccaccgggatttgggccgtcccat 42443994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 50463318 - 50463202
Alignment:
Q  77 atgggccggctcattggcccatattttt-----gggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggcca 170  Q
    |||||||||| |||||||||||||||||     ||| ||||||||||||||||||       |||  ||||| ||||| |||||| ||||| ||||||||    
T  50463318 atgggccggcccattggcccatatttttgggccgggccgggcctaaaaaactaaccaaaaaatgcgctcgggcttttttggcccaagcccatttgggcca 50463219  T
Q  171 tacaaaagttgggccgg 187  Q
     ||||||||||||||||    
T  50463218 gacaaaagttgggccgg 50463202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 13159404 - 13159282
Alignment:
Q  109 cgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggac-----tggcccaccggac 202  Q
    ||||||||||||||||||       |||  ||||| ||||| |||||| ||||||| |||||| |||||||||||||||| |     |||||||||||      
T  13159404 cgggcctaaaaaactaaccaaaaaatgcgctcgggcttttttggcccaagcccatttgggccagacaaaagttgggccgggccgggctggcccaccggga 13159305  T
Q  203 tttgggccggcccattagcccat 225  Q
    |||||||||||||||| ||||||    
T  13159304 tttgggccggcccattggcccat 13159282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 37137006 - 37136965
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  37137006 atgaatttaacttaaagttttaaaattttaaagtttataaat 37136965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 55010612 - 55010571
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  55010612 atgaatttagcataaagttttaaaattttaaagtttataaat 55010571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 24426036 - 24426072
Alignment:
Q  189 ctggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||||||||||||||||||||| ||||||    
T  24426036 ctggcccaccggactttgggccggcccatttgcccat 24426072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 45200198 - 45200158
Alignment:
Q  178 gttgggccggactggcccaccggactttgggccggcccatt 218  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  45200198 gttgggccgggctggcccaccgggctttgggccggcccatt 45200158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 7956166 - 7956107
Alignment:
Q  62 ttagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcctaaaaaa 121  Q
    |||||| ||||||||| ||| |||| ||||||||||  |||||||||||||||| |||||    
T  7956166 ttagagctgtcaaaaacggggcggcccattggcccaattttttgggtcgggcctcaaaaa 7956107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 33775166 - 33775132
Alignment:
Q  92 ggcccatatttttgggtcgggcctaaaaaactaac 126  Q
    |||||||||||||||| ||||||||||||||||||    
T  33775166 ggcccatatttttgggccgggcctaaaaaactaac 33775132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 375
Target Start/End: Original strand, 42445917 - 42445955
Alignment:
Q  337 aatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  42445917 aatttagcttaaagtattaaaattttaaagtttataaat 42445955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 53302552 - 53302642
Alignment:
Q  141 gggttttttcggcccaggccca-ttgggccatacaaaagtt-----gggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||||| |||||| || || ||||||||||| ||||||     ||||||| ||||||||| || ||||||||||||||||| ||||||    
T  53302552 gggtttttttggcccaagctcagttgggccatacgaaagttcgaccgggccgggctggcccactgggctttgggccggcccattggcccat 53302642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 53303719 - 53303809
Alignment:
Q  141 gggttttttcggcccaggccca-ttgggccatacaaaagtt-----gggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||||| |||||| || || ||||||||||| ||||||     ||||||| ||||||||| || ||||||||||||||||| ||||||    
T  53303719 gggtttttttggcccaagctcagttgggccatacgaaagttcgaccgggccgggctggcccactgggctttgggccggcccattggcccat 53303809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 375
Target Start/End: Complemental strand, 29170331 - 29170302
Alignment:
Q  346 tacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||||||||||||||    
T  29170331 tacagttttaaaattttaaagtttataaat 29170302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 8242081 - 8242229
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaa 175  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||       |||| ||||| ||||| |||||| ||||||| ||||||| |||    
T  8242081 atgggccggcccattggcccatagttttgggtcgggcctaaaaaactaacgaaaaa-tgcactcgggcttttttggcccaagcccatttgggccattcaa 8242179  T
Q  176 aagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||| |||||||| ||| |||||| |||||||||| ||||||    
T  8242180 aagttgggccgggctggcccaacgggctttggaccggcccattggcccat 8242229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 10361090 - 10361209
Alignment:
Q  107 gtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggactggcccaccggacttt 205  Q
    ||||||||||||||||||||       ||||  |||| ||| |||||||| ||||||| |||||||||||||||| |||||| |||||||||||| ||||    
T  10361090 gtcgggcctaaaaaactaaccaaaaaatgcacccgggctttgtcggcccaagcccatttgggccatacaaaagttaggccgggctggcccaccgggcttt 10361189  T
Q  206 gggccggcccattagcccat 225  Q
    ||||||||||||||||||||    
T  10361190 gggccggcccattagcccat 10361209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 25942402 - 25942569
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttggg-----tcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccag 157  Q
    ||||| ||| |||||||| ||||| ||||| ||||||||||||||     |||||||||||||||||||       |||| ||||| ||||| ||||||     
T  25942402 tagagctgtaaaaaatggaccggcccattgacccatatttttgggccgggtcgggcctaaaaaactaacaaaaaa-tgcactcgggcttttttggcccaa 25942500  T
Q  158 gcccatt-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||| ||| |||||||||||||||| || ||||||||| || ||||||||||||||||||||||||    
T  25942501 gcccatttggggcatacaaaagttgggctggcctggcccactgggctttgggccggcccattagcccat 25942569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 225
Target Start/End: Original strand, 32455393 - 32455567
Alignment:
Q  62 ttagagttgtcaaaaatgggccggctcattggcccatatttttg-----ggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggccca 156  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||     |  ||||||||||||||||||       |||| |||| ||||||| |||||    
T  32455393 ttagagctgtcaaaaatgggccggcccattgacccatatttttgaaccggaccgggcctaaaaaactaacaaaaaaatgcactcggattttttcagccca 32455492  T
Q  157 ggcccatt-gggccatacaaaagttgggccggac-----tggcccaccggactttgggccggcccattagcccat 225  Q
     ||||||| ||||||||||||||||||| ||| |     |||||||| || ||||||||||||||||||||||||    
T  32455493 agcccatttgggccatacaaaagttgggtcgggcggggctggcccactgggctttgggccggcccattagcccat 32455567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 69 - 225
Target Start/End: Complemental strand, 19348042 - 19347881
Alignment:
Q  69 tgtcaaaaatgggccggctcattggcccatatttttgggtcgggcc-----taaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccat 163  Q
    ||||||||||||||||||  || ||||||||||||| || ||||||     ||||||||||||       || | ||||| |||||||||| | ||||||    
T  19348042 tgtcaaaaatgggccggcctatcggcccatatttttaggccgggccggacctaaaaaactaacaaaaaa-tgtactcgggctttttcggcctaagcccat 19347944  T
Q  164 t-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    | |||||||||||||||||||||||  ||| ||||||| |||| |||||||||||||||||||    
T  19347943 ttgggccatacaaaagttgggccgggttggtccaccgggctttaggccggcccattagcccat 19347881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 45261340 - 45261456
Alignment:
Q  109 cgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggactggcccaccggactttgg 207  Q
    ||||||||||||||||||       |||| ||||| ||||| |||||| ||| ||| ||||||||||||||||||||||||||| |||||||| |||| |    
T  45261340 cgggcctaaaaaactaacgaaaaaatgcactcgggcttttttggcccaagcctatttgggccatacaaaagttgggccggactgacccaccgggcttt-g 45261438  T
Q  208 gccggcccattagcccat 225  Q
    ||||||||||| ||||||    
T  45261439 gccggcccattggcccat 45261456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 13932589 - 13932545
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  13932589 tggatgaatttagcttacagttttaaaattttaaagtttataaat 13932545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 25942662 - 25942706
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25942662 tggatgaatttagcttacagttttaaaattttaaagtttataaat 25942706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 29646854 - 29646898
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29646854 tggatgaatttagcttacagttttaaaattttaaagtttataaat 29646898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 333 - 375
Target Start/End: Original strand, 8242339 - 8242381
Alignment:
Q  333 gatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8242339 gatgaatttagcttacagttttaaaattttaaagtttataaat 8242381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 187
Target Start/End: Original strand, 11910791 - 11910870
Alignment:
Q  109 cgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccgg 187  Q
    ||||||||||||||||||       |||| |||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  11910791 cgggcctaaaaaactaaccaaaaaatgcactcgggttttttcggcccaagcccatttgggccatacaaaagttgggccgg 11910870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 32455673 - 32455717
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  32455673 tggatgaatttagcttacagttttataattttaaagtttataaat 32455717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 45261565 - 45261609
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  45261565 tggatgaatttagcttacacttttaaaattttaaagtttataaat 45261609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 46510483 - 46510439
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  46510483 tggatgaatttagcttacggttttaaaattttaaagtttataaat 46510439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 13932811 - 13932695
Alignment:
Q  77 atgggccggctcattggcccatatttttgg-----gtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||||| |||||||| ||||||||||     | ||||||||||||||||||       |||| ||||| |||||||||||| ||||||| ||||||    
T  13932811 atgggccggcccattggccaatatttttggaccgggccgggcctaaaaaactaactaaaaaatgcactcgggctttttcggcccaagcccatttgggcca 13932712  T
Q  171 tacaaaagttgggccgg 187  Q
    |||||||||||| ||||    
T  13932711 tacaaaagttggtccgg 13932695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 29646597 - 29646713
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcc-----taaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||||  |||||||||||||||||||| ||||||     ||||||||||||       |||| ||||| |||||||||||| ||||||| ||||||    
T  29646597 atgggccggtccattggcccatatttttgggccgggccgggcctaaaaaactaacaaaaaaatgcactcgggctttttcggcccaagcccatttgggcca 29646696  T
Q  171 tacaaaagttgggccgg 187  Q
    || ||||||||||||||    
T  29646697 taaaaaagttgggccgg 29646713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 61 - 182
Target Start/End: Complemental strand, 46510757 - 46510630
Alignment:
Q  61 cttagagttgtcaaaaatgggccggctcattggcccatattttt-----gggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggccc 155  Q
    ||||||| |||||||||||||||||| ||||| |||||||||||     ||| | ||||||||||||||||       |||| ||||| |||||||  ||    
T  46510757 cttagagctgtcaaaaatgggccggcccattgacccatatttttaggccgggccaggcctaaaaaactaaccaaaaaatgcactcgggatttttcgatcc 46510658  T
Q  156 aggccca-ttgggccatacaaaagttgg 182  Q
    | ||||| ||||||||||||||||||||    
T  46510657 aagcccatttgggccatacaaaagttgg 46510630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 10318670 - 10318711
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  10318670 atgaatttagcttaaagttttaaaattttaaagtttataaat 10318711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 10361316 - 10361360
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  10361316 tggatgaatttagcttacaattttaaaatttgaaagtttataaat 10361360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 15976424 - 15976465
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  15976424 atgaatatagcttaaagttttaaaattttaaagtttataaat 15976465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 3587161 - 3587329
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcgggcct-----aaaaaactaacnnnnnnntgcattcgggttttttcggcccag 157  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||| ||||||      |||||||||||       |||| ||||| ||||| ||||||     
T  3587161 tagagctgtcaaaaatgggccggcccattggccgatatttttgggccgggccgggccaaaaaaactaaccaaaaaatgcactcgggcttttttggcccaa 3587260  T
Q  158 gcccatt-gggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||| |||||||| |||||||||||||||    
T  3587261 gcccatttgggccatacaaaagttgggtcgggctggcccaccgggctttgggctggcccattagcccat 3587329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 12569603 - 12569435
Alignment:
Q  63 tagagttgtcaaaaatgggccgg-ctcattggcccatatttttgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccc 161  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||| | | ||||||||||||||       ||||  |||| |||| ||||||| ||||    
T  12569603 tagaggtgtcaaaaatgggccgggctcatgggcccatatttttgggccagacctaaaaaactaacaaaaaaatgcacccgggctttt-cggcccaagccc 12569505  T
Q  162 att-gggccatacaaaagtt-----gggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||| ||||||||||||| ||     ||||||| |||||||||||| ||||||||||||||||||||||||    
T  12569504 atttgggccatacaaaatttaggtcgggccgggctggcccaccgggctttgggccggcccattagcccat 12569435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 42807958 - 42808112
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggc----ctaaaaaactaacnnnnnnntgcattcggg-ttttttcggcccaggcccatt-gggcca 170  Q
    ||||| |||| |||||||| ||||||||||| ||| |    |||||||||||||       |||| ||||| ||||||||| | | ||||||| ||||||    
T  42807958 atgggtcggcccattggcctatatttttgggccggacggacctaaaaaactaaccaaaaaatgcactcgggcttttttcggtctaagcccatttgggcca 42808057  T
Q  171 tacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  42808058 tacaaaagttgggccagcctggcccaccgggctttgggccggcccattagcccat 42808112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 3237374 - 3237330
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3237374 tggatgaatttagcttacagttttaaaattttaaagtttataaat 3237330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 4185458 - 4185502
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  4185458 tggatgaatttagcttacagttttaaaattttaaagtttataaat 4185502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 9650930 - 9650886
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9650930 tggatgaatttagcttacagttttaaaattttaaagtttataaat 9650886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 11706441 - 11706397
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11706441 tggatgaatttagcttacagttttaaaattttaaagtttataaat 11706397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 40022138 - 40022094
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  40022138 tggatgaatttagcttacagttttaaaattttaaagtttataaat 40022094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 3587436 - 3587480
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  3587436 tggatgaatttagcttacagttttataattttaaagtttataaat 3587480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 371
Target Start/End: Original strand, 4158906 - 4158946
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttat 371  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4158906 tggatgaatttagcttacagttttaaaattttaaagtttat 4158946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 25325056 - 25325012
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  25325056 tggatgaatttagcttacaattttaaaattttaaagtttataaat 25325012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 26827318 - 26827274
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  26827318 tggatgaatttagcttacagtttaaaaattttaaagtttataaat 26827274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 374
Target Start/End: Complemental strand, 33907049 - 33907006
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaa 374  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  33907049 tggatgaatttagattacagttttaaaattttaaagtttataaa 33907006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 3237582 - 3237485
Alignment:
Q  134 tgcattcgggttttttcggcccaggccca-ttgggccatacaaaagttggg-----ccggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||| ||||| ||||||||| || ||||| |||||||||||||||||||||     |||| |||||| |||| |||||||| ||||||||||||||||    
T  3237582 tgcactcgggctttttcggctcaagcccacttgggccatacaaaagttgggtcgggccgggctggccaaccgaactttgggtcggcccattagcccat 3237485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 45116571 - 45116612
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  45116571 atgaatttagcttaaagttttaaaattttaaagtttataaat 45116612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 12569328 - 12569284
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  12569328 tggatgaatttagcttacaattttaaaatttgaaagtttataaat 12569284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 42808219 - 42808263
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||    
T  42808219 tggatgaatttagcttacaattttaaaactttaaagtttataaat 42808263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 4185284 - 4185351
Alignment:
Q  163 ttgggccatacaaaagttgggccggac-----tggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||||||||||||||||||     |||| |||||| |||||| |||||||||||||||||    
T  4185284 ttgggccatacaaaagttgggccggaccgggttggctcaccgggctttggaccggcccattagcccat 4185351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 9651139 - 9651060
Alignment:
Q  109 cgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccgg 187  Q
    ||||||||||||||||||       |||| ||||| |||||||||||| ||||||| |||||||| ||||||||||||||    
T  9651139 cgggcctaaaaaactaaccaaaaaatgcactcgggctttttcggcccaagcccatttgggccataaaaaagttgggccgg 9651060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 38992331 - 38992290
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  38992331 atgaatttagcttaaagttttaaaatttcaaagtttataaat 38992290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 44088849 - 44088890
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  44088849 atgaatttagtttaaagttttaaaattttaaagtttataaat 44088890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 4158670 - 4158707
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcc 114  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  4158670 atgggccggcccattggcccatatttttgggccgggcc 4158707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 44088536 - 44088484
Alignment:
Q  63 tagagttgtcaaaaatgggccg-gctcattggcccatatttttgggtcgggcc 114  Q
    ||||| ||||||||||||| || || |||||||||||||||||||| ||||||    
T  44088536 tagagctgtcaaaaatgggtcgagcccattggcccatatttttgggccgggcc 44088484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 30044222 - 30044087
Alignment:
Q  71 tcaaaaatgggccggctcattggcccatatttttgggtcg-----ggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt- 164  Q
    |||||||||||||||| |||||||||||||||||||| ||     ||||||||||||||||       |||| ||||| |||||||||||| |||||||     
T  30044222 tcaaaaatgggccggcccattggcccatatttttgggccgagacgggcctaaaaaactaaccaaaaaatgcactcggggtttttcggcccaagcccattt 30044123  T
Q  165 gggccatacaaaagttgggccggactggcccaccgg 200  Q
    ||||||||||||||||||| ||| ||||||||||||    
T  30044122 gggccatacaaaagttgggtcgggctggcccaccgg 30044087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 34677223 - 34677095
Alignment:
Q  104 tgggtcgggcctaaaaaactaacnnnnnnntgcattcggg-ttttttcggcccaggcccatt-gggccatacaaaagttgggcc-----ggactggccca 196  Q
    ||||||||||||||||||||||        |||| ||||| |||||| |||||| ||||||| |||||||||||||||||||||     || ||||||||    
T  34677223 tgggtcgggcctaaaaaactaaacaaaaaatgcactcgggcttttttgggcccaagcccatttgggccatacaaaagttgggccaggcggggctggccca 34677124  T
Q  197 ccggactttgggccggcccattagcccat 225  Q
    |||| ||||||||||||||||||||||||    
T  34677123 ccgggctttgggccggcccattagcccat 34677095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 6862278 - 6862322
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6862278 tggatgaatttagcttacagttttaaaattttaaagtttataaat 6862322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 10321279 - 10321235
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10321279 tggatgaatttagcttacagttttaaaattttaaagtttataaat 10321235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 15707487 - 15707531
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15707487 tggatgaatttagcttacagttttaaaattttaaagtttataaat 15707531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 21038672 - 21038628
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  21038672 tggatgaatttagcttacagttttaaaattttaaagtttataaat 21038628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 15707247 - 15707361
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgggcc-----taaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||||| |||||||||||||||||||| ||||||     ||||||||||||       |||| ||||| ||||| |||||| ||||||| ||||||    
T  15707247 atgggccggcccattggcccatatttttgggccgggccgggcctaaaaaactaacaaaaaaatgcactcgggcttttttggcccaagcccatttgggcca 15707346  T
Q  171 tacaaaagttgggcc 185  Q
    |||||||||||||||    
T  15707347 tacaaaagttgggcc 15707361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 2978805 - 2978849
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  2978805 tggatgaatttagcttacaattttaaaattttaaagtttataaat 2978849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 10321476 - 10321386
Alignment:
Q  141 gggttttttcggcccaggcccatt-gggccatacaaaagttgggccggac-----tggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||||||||||||  |||||| ||| ||||||||||||||||||| |     ||||| || |||||||||||||| ||||||||||||    
T  10321476 gggttttttcggcccaatcccatttgggtcatacaaaagttgggccgggcagggctggccaactggactttgggccggaccattagcccat 10321386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 34676988 - 34676943
Alignment:
Q  331 tggatgaattt-agcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  34676988 tggatgaattttagcttacggttttaaaattttaaagtttataaat 34676943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 2978550 - 2978595
Alignment:
Q  62 ttagagttgtcaaaaatgggccggctcattggcccatatttttggg 107  Q
    |||||| |||||||||||||||||  ||||| ||||||||||||||    
T  2978550 ttagagctgtcaaaaatgggccggtccattgtcccatatttttggg 2978595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 3106763 - 3106722
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||| ||||  ||||||||||||||||||||||||||    
T  3106763 atgaatttaacttaaggttttaaaattttaaagtttataaat 3106722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Original strand, 11545929 - 11545978
Alignment:
Q  63 tagagttgtcaaaaatgggccggctcattggcccatatttttgggtcggg 112  Q
    ||||| ||||||||| |||||||| || ||||||||||||||||| ||||    
T  11545929 tagagctgtcaaaaacgggccggcccaatggcccatatttttgggccggg 11545978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 104 - 225
Target Start/End: Original strand, 58202 - 58329
Alignment:
Q  104 tgggtcgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccgga-----ctggcccac 197  Q
    |||| |||||||| |||||||||       |||| ||||| |||||||||||| ||||||| |||||||||||||||||||||||      |||||||||    
T  58202 tgggccgggcctagaaaactaacaaaaaaatgcactcgggctttttcggcccaagcccatttgggccatacaaaagttgggccgggtcgggctggcccac 58301  T
Q  198 cggactttgggccggcccattagcccat 225  Q
    ||| ||||||||||||||||||||||||    
T  58302 cgggctttgggccggcccattagcccat 58329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 58425 - 58469
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  58425 tggatgaatttagcttacagttttaaaattttaaattttataaat 58469  T

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Target: scaffold0242 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 3911 - 3955
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3911 tggatgaatttagcttacagttttaaaattttaaagtttataaat 3955  T

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Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 10371173 - 10371129
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10371173 tggatgaatttagcttacagttttaaaattttaaagtttataaat 10371129  T

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Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 18405962 - 18406006
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18405962 tggatgaatttagcttacagttttaaaattttaaagtttataaat 18406006  T

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Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Complemental strand, 28210690 - 28210646
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28210690 tggatgaatttagcttacagttttaaaattttaaagtttataaat 28210646  T

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Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 34374849 - 34374893
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34374849 tggatgaatttagcttacagttttaaaattttaaagtttataaat 34374893  T

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Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 35540377 - 35540421
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35540377 tggatgaatttagcttacagttttaaaattttaaagtttataaat 35540421  T

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Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 35540229 - 35540291
Alignment:
Q  163 ttgggccatacaaaagttgggccggactggcccaccggactttgggccggcccattagcccat 225  Q
    ||||||||||||||||||||||||| |||||||| ||  ||||||| ||||||||||||||||    
T  35540229 ttgggccatacaaaagttgggccgggctggcccatcgagctttgggacggcccattagcccat 35540291  T

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Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 225
Target Start/End: Original strand, 18405696 - 18405854
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcggg-----cctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggcca 170  Q
    |||||||| | |||||||||||||||||||||||||     ||||||||||||||       |||| || || |||||| ||||| ||||||| |||||     
T  18405696 atgggccgacccattggcccatatttttgggtcgggtcgggcctaaaaaactaacaaaaaa-tgcactcaggctttttcagcccaagcccatttgggccg 18405794  T
Q  171 tacaaaagttgggcc-----ggactggcccaccggactttgggccggcccattagcccat 225  Q
    |||||||||||||||     || ||||| || ||| ||||||||||||||||||||||||    
T  18405795 tacaaaagttgggccaggccgggctggcacatcgggctttgggccggcccattagcccat 18405854  T

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Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 28210927 - 28210814
Alignment:
Q  77 atgggccggctcattggcccatatttttgggtcgg-----gcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggccca-ttgggcca 170  Q
    ||||| |||| ||||| ||||||||||||||||||     |||||||||||||||       |||| ||||| ||||| |||||| ||||| ||||||||    
T  28210927 atgggtcggcccattgacccatatttttgggtcgggtcgagcctaaaaaactaaccaaaaaatgcactcgggcttttttggcccaagcccatttgggcca 28210828  T
Q  171 tacaaaagttgggc 184  Q
    ||||||||||||||    
T  28210827 tacaaaagttgggc 28210814  T

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Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 23219718 - 23219677
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  23219718 atgaatttagcttaaagttttaaaattttaaattttataaat 23219677  T

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Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 6630947 - 6630987
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaa 374  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  6630947 atgaatttagcttaaagctttaaaattttaaagtttataaa 6630987  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 337 - 375
Target Start/End: Complemental strand, 18256408 - 18256370
Alignment:
Q  337 aatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  18256408 aatttagcttagggttttaaaattttaaagtttataaat 18256370  T

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Target: scaffold0137 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 24492 - 24536
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  24492 tggatgaatttaacttacagttttaaaattttaaagtttataaat 24536  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 375
Target Start/End: Original strand, 147813 - 147857
Alignment:
Q  331 tggatgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  147813 tggatgaatttagcttacggttttaaaattttaaagtttataaat 147857  T

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Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 147584 - 147706
Alignment:
Q  109 cgggcctaaaaaactaacnnnnnnntgcattcgggttttttcggcccaggcccatt-gggccatacaaaagttgggccggac-----tggcccaccggac 202  Q
    ||||||||||||||||||       |||  ||||| ||||| |||||| ||||||| |||||| |||||||||||||||| |     |||||||||||      
T  147584 cgggcctaaaaaactaaccaaaaaatgcgctcgggcttttttggcccaagcccatttgggccagacaaaagttgggccgggccgggctggcccaccggga 147683  T
Q  203 tttgggccggcccattagcccat 225  Q
    |||||||||||||||| ||||||    
T  147684 tttgggccggcccattggcccat 147706  T

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Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 22321 - 22362
Alignment:
Q  334 atgaatttagcttacagttttaaaattttaaagtttataaat 375  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  22321 atgaatttaccttaaagttttaaaattttaaagtttataaat 22362  T

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