View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19675_high_66 (Length: 250)
Name: NF19675_high_66
Description: NF19675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19675_high_66 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 36809472 - 36809706
Alignment:
| Q |
16 |
ataacatgacactaatgaaacaagtatgtcaagaccagcaatagattagaacatatctcaaaccaaaattttaaggcatgaatataagttgtttctctta |
115 |
Q |
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| T |
36809472 |
ataatatgacactaatgaaacaagtatgtcaagaccaacaagagattagaacatatctcaaaccaaaattttaaggcatgaatatgagttgtttctcttc |
36809571 |
T |
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| Q |
116 |
taaatctaacatttaagtcattcatagttaatcactcatgcttgaactaaaacactaaccatgattactcttaagaaataacaaggcaaaatagttggca |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
36809572 |
taaatctaacatttaagtcattcatagttaatcactcatgcttgaactaaaacactaaccaggattactcttaagaaataacaaggcaaaatagttggca |
36809671 |
T |
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| Q |
216 |
ctttgtgtcttttccaatttctttcaccatccaaa |
250 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
36809672 |
ctttgtgtcttttccaatttctttcaccatccaaa |
36809706 |
T |
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