View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19675_low_36 (Length: 391)

Name: NF19675_low_36
Description: NF19675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19675_low_36
NF19675_low_36
[»] chr8 (51 HSPs)
chr8 (1-372)||(11052417-11052786)
chr8 (146-265)||(4259859-4259978)
chr8 (146-263)||(38289211-38289328)
chr8 (159-265)||(41454816-41454922)
chr8 (145-265)||(1032570-1032690)
chr8 (147-265)||(3311440-3311558)
chr8 (145-265)||(34037923-34038043)
chr8 (146-265)||(22652683-22652802)
chr8 (146-265)||(39104607-39104725)
chr8 (169-265)||(41845428-41845524)
chr8 (146-265)||(36587626-36587745)
chr8 (146-265)||(38063977-38064096)
chr8 (145-200)||(43413861-43413916)
chr8 (175-265)||(36103927-36104017)
chr8 (149-266)||(19957300-19957417)
chr8 (146-265)||(1360111-1360229)
chr8 (145-265)||(23139074-23139196)
chr8 (146-256)||(5904350-5904460)
chr8 (146-265)||(13906597-13906721)
chr8 (146-263)||(19733045-19733162)
chr8 (147-264)||(43456630-43456746)
chr8 (146-255)||(45536728-45536837)
chr8 (169-265)||(10621374-10621470)
chr8 (145-256)||(43508425-43508534)
chr8 (169-256)||(279996-280082)
chr8 (169-256)||(635770-635856)
chr8 (169-256)||(821573-821659)
chr8 (146-263)||(8350438-8350556)
chr8 (146-264)||(38544901-38545018)
chr8 (169-270)||(33820394-33820495)
chr8 (145-265)||(44828407-44828528)
chr8 (145-209)||(17855705-17855769)
chr8 (178-265)||(30466679-30466766)
chr8 (146-200)||(8349459-8349513)
chr8 (146-265)||(10161964-10162088)
chr8 (217-259)||(16973028-16973070)
chr8 (228-265)||(40103522-40103559)
chr8 (146-202)||(8145836-8145892)
chr8 (146-261)||(29114106-29114220)
chr8 (145-202)||(39165043-39165099)
chr8 (156-194)||(32328053-32328091)
chr8 (170-223)||(34073238-34073292)
chr8 (146-205)||(39258640-39258697)
chr8 (145-209)||(2800075-2800137)
chr8 (149-202)||(11690933-11690986)
chr8 (170-209)||(5184886-5184926)
chr8 (151-208)||(7603794-7603849)
chr8 (145-202)||(14684193-14684248)
chr8 (148-200)||(27102310-27102362)
chr8 (146-209)||(31129358-31129419)
chr8 (146-202)||(39172189-39172245)
[»] chr6 (32 HSPs)
chr6 (145-265)||(6228235-6228355)
chr6 (145-265)||(18903342-18903462)
chr6 (145-265)||(20415537-20415657)
chr6 (149-265)||(7954901-7955018)
chr6 (146-265)||(17216958-17217077)
chr6 (146-265)||(4854282-4854401)
chr6 (146-265)||(30422084-30422203)
chr6 (156-265)||(24794881-24794990)
chr6 (146-255)||(29321952-29322061)
chr6 (146-261)||(1128392-1128510)
chr6 (146-262)||(19748102-19748217)
chr6 (146-263)||(11552873-11552990)
chr6 (145-265)||(3974442-3974561)
chr6 (146-209)||(11611425-11611488)
chr6 (146-265)||(15716984-15717108)
chr6 (158-264)||(31637345-31637451)
chr6 (146-265)||(3200059-3200178)
chr6 (145-265)||(25045740-25045864)
chr6 (146-202)||(5641666-5641722)
chr6 (177-265)||(18618546-18618634)
chr6 (145-198)||(9763502-9763554)
chr6 (226-263)||(21874277-21874314)
chr6 (147-199)||(7164760-7164812)
chr6 (146-209)||(14981680-14981741)
chr6 (145-209)||(3448408-3448470)
chr6 (145-209)||(18904660-18904722)
chr6 (145-209)||(25020505-25020567)
chr6 (157-202)||(25091086-25091131)
chr6 (146-209)||(6658521-6658582)
chr6 (146-200)||(18991420-18991471)
chr6 (170-209)||(22983636-22983676)
chr6 (170-209)||(23804732-23804772)
[»] chr7 (49 HSPs)
chr7 (145-252)||(4956067-4956174)
chr7 (145-265)||(31793468-31793588)
chr7 (145-265)||(48433685-48433805)
chr7 (145-265)||(27454011-27454132)
chr7 (147-265)||(23824569-23824686)
chr7 (169-265)||(40273821-40273917)
chr7 (146-253)||(38378231-38378338)
chr7 (149-265)||(36528198-36528314)
chr7 (156-265)||(42554634-42554743)
chr7 (145-265)||(24029985-24030104)
chr7 (145-271)||(3889775-3889902)
chr7 (146-265)||(46266668-46266787)
chr7 (145-261)||(12166086-12166202)
chr7 (169-265)||(33248801-33248897)
chr7 (145-260)||(3961383-3961498)
chr7 (147-265)||(15025156-15025274)
chr7 (156-253)||(43440701-43440798)
chr7 (145-205)||(5228130-5228190)
chr7 (146-253)||(22156110-22156216)
chr7 (146-253)||(22212025-22212131)
chr7 (147-265)||(26455982-26456100)
chr7 (148-265)||(48619797-48619913)
chr7 (146-210)||(26606085-26606149)
chr7 (145-209)||(28914852-28914916)
chr7 (146-261)||(37918684-37918799)
chr7 (218-265)||(1575694-1575741)
chr7 (145-266)||(23602273-23602394)
chr7 (146-209)||(10091433-10091496)
chr7 (145-209)||(29658249-29658311)
chr7 (169-256)||(34322023-34322110)
chr7 (146-209)||(33202532-33202593)
chr7 (149-267)||(37665742-37665860)
chr7 (146-202)||(4590589-4590645)
chr7 (145-265)||(14707293-14707412)
chr7 (189-265)||(42338266-42338342)
chr7 (169-200)||(25775612-25775643)
chr7 (146-202)||(27907874-27907928)
chr7 (146-265)||(28712368-28712486)
chr7 (145-209)||(34948162-34948224)
chr7 (169-251)||(46195932-46196014)
chr7 (169-202)||(20529959-20529992)
chr7 (151-209)||(21285336-21285392)
chr7 (145-209)||(24397001-24397063)
chr7 (234-271)||(38110246-38110283)
chr7 (146-198)||(1576373-1576425)
chr7 (220-264)||(3902323-3902367)
chr7 (234-266)||(9992609-9992641)
chr7 (146-194)||(33413903-33413951)
chr7 (169-201)||(42841780-42841812)
[»] chr4 (55 HSPs)
chr4 (146-265)||(16556451-16556570)
chr4 (146-265)||(36993041-36993160)
chr4 (145-265)||(40406935-40407056)
chr4 (145-265)||(46283122-46283242)
chr4 (145-265)||(50815707-50815827)
chr4 (145-265)||(51974747-51974867)
chr4 (145-264)||(11491194-11491313)
chr4 (169-265)||(43362167-43362263)
chr4 (145-261)||(45847901-45848017)
chr4 (146-256)||(45355694-45355803)
chr4 (146-256)||(45369435-45369544)
chr4 (146-265)||(48404113-48404232)
chr4 (147-256)||(25234835-25234944)
chr4 (160-265)||(43084447-43084552)
chr4 (169-265)||(22096390-22096486)
chr4 (146-270)||(42154561-42154685)
chr4 (178-261)||(8716398-8716481)
chr4 (147-265)||(2832048-2832166)
chr4 (149-265)||(38690666-38690782)
chr4 (181-265)||(27862842-27862926)
chr4 (146-265)||(26885376-26885495)
chr4 (147-265)||(35909005-35909124)
chr4 (145-208)||(37574329-37574392)
chr4 (146-202)||(44251303-44251359)
chr4 (181-265)||(52366207-52366291)
chr4 (190-256)||(24253128-24253194)
chr4 (147-209)||(37889583-37889645)
chr4 (152-253)||(17329105-17329206)
chr4 (168-253)||(23448985-23449069)
chr4 (149-196)||(2931133-2931180)
chr4 (169-267)||(24570208-24570306)
chr4 (147-209)||(29430553-29430615)
chr4 (27-88)||(41034304-41034365)
chr4 (152-209)||(12820389-12820444)
chr4 (168-252)||(41271976-41272060)
chr4 (149-201)||(49607940-49607992)
chr4 (146-198)||(49811384-49811436)
chr4 (220-263)||(8716556-8716599)
chr4 (157-265)||(13210146-13210259)
chr4 (226-265)||(19687650-19687689)
chr4 (145-209)||(29269292-29269354)
chr4 (230-265)||(31261764-31261799)
chr4 (146-209)||(32296318-32296381)
chr4 (146-210)||(49280647-49280709)
chr4 (145-200)||(56555613-56555668)
chr4 (146-200)||(22341838-22341892)
chr4 (149-204)||(39992896-39992949)
chr4 (145-209)||(8690270-8690332)
chr4 (145-209)||(9693018-9693080)
chr4 (170-210)||(24234073-24234114)
chr4 (145-209)||(28520708-28520770)
chr4 (146-209)||(14149849-14149910)
chr4 (145-202)||(21476058-21476113)
chr4 (146-209)||(48968188-48968249)
chr4 (169-201)||(49607614-49607646)
[»] chr2 (43 HSPs)
chr2 (146-265)||(34107495-34107613)
chr2 (149-265)||(19843342-19843458)
chr2 (146-265)||(41749947-41750065)
chr2 (146-262)||(3330177-3330293)
chr2 (145-265)||(33065232-33065352)
chr2 (146-265)||(18949661-18949779)
chr2 (145-265)||(43027155-43027275)
chr2 (149-265)||(18424131-18424244)
chr2 (146-253)||(17543066-17543173)
chr2 (146-265)||(31149078-31149196)
chr2 (147-265)||(40203256-40203374)
chr2 (149-266)||(25783193-25783309)
chr2 (147-247)||(5901808-5901908)
chr2 (146-261)||(1962830-1962944)
chr2 (146-265)||(29090416-29090534)
chr2 (146-265)||(42678300-42678419)
chr2 (146-263)||(6866510-6866627)
chr2 (169-209)||(37886224-37886264)
chr2 (145-201)||(42541219-42541275)
chr2 (157-265)||(11069336-11069440)
chr2 (146-209)||(33613581-33613644)
chr2 (153-200)||(39462921-39462968)
chr2 (219-265)||(16403525-16403571)
chr2 (145-267)||(24202148-24202270)
chr2 (173-267)||(36755620-36755714)
chr2 (146-223)||(37592198-37592275)
chr2 (154-194)||(3402683-3402723)
chr2 (145-201)||(41541515-41541571)
chr2 (146-201)||(5207156-5207211)
chr2 (226-265)||(25553201-25553240)
chr2 (147-209)||(29035032-29035092)
chr2 (147-181)||(32084922-32084956)
chr2 (146-209)||(32891337-32891398)
chr2 (151-209)||(8234775-8234831)
chr2 (151-209)||(20122458-20122514)
chr2 (169-202)||(20435844-20435877)
chr2 (146-191)||(38413030-38413074)
chr2 (169-265)||(43684279-43684374)
chr2 (157-201)||(6270495-6270539)
chr2 (170-209)||(9796953-9796993)
chr2 (145-209)||(17269968-17270032)
chr2 (169-201)||(20375657-20375689)
chr2 (169-201)||(33482641-33482673)
[»] chr3 (57 HSPs)
chr3 (145-263)||(47864638-47864756)
chr3 (145-265)||(50381714-50381834)
chr3 (145-265)||(11483613-11483733)
chr3 (145-265)||(33528180-33528300)
chr3 (145-265)||(46798582-46798702)
chr3 (146-257)||(27471512-27471623)
chr3 (146-265)||(39739274-39739393)
chr3 (146-265)||(27817044-27817162)
chr3 (145-265)||(55426114-55426230)
chr3 (145-256)||(22602178-22602289)
chr3 (145-255)||(16141328-16141438)
chr3 (145-265)||(25165440-25165564)
chr3 (146-247)||(31435477-31435578)
chr3 (146-247)||(38414901-38415002)
chr3 (146-262)||(985895-986011)
chr3 (169-265)||(29226326-29226422)
chr3 (149-265)||(45431627-45431743)
chr3 (146-265)||(9320935-9321054)
chr3 (146-209)||(29645803-29645866)
chr3 (146-265)||(32421348-32421467)
chr3 (145-265)||(46247260-46247382)
chr3 (145-209)||(1102671-1102735)
chr3 (146-210)||(27394562-27394626)
chr3 (145-201)||(38668192-38668248)
chr3 (149-266)||(23651049-23651166)
chr3 (145-265)||(49429461-49429580)
chr3 (146-253)||(1325307-1325415)
chr3 (146-242)||(44062018-44062113)
chr3 (146-265)||(54457153-54457272)
chr3 (145-267)||(166786-166908)
chr3 (146-263)||(7517942-7518059)
chr3 (145-202)||(8930952-8931009)
chr3 (146-265)||(30162657-30162780)
chr3 (146-209)||(50676843-50676906)
chr3 (219-265)||(2259157-2259203)
chr3 (218-268)||(30745217-30745267)
chr3 (219-265)||(34225195-34225241)
chr3 (219-269)||(45510779-45510829)
chr3 (169-257)||(33830367-33830455)
chr3 (217-265)||(8258152-8258200)
chr3 (145-201)||(43897666-43897722)
chr3 (145-209)||(33206813-33206875)
chr3 (145-202)||(36763494-36763552)
chr3 (145-209)||(46328901-46328963)
chr3 (145-209)||(24136727-24136791)
chr3 (169-267)||(31419581-31419679)
chr3 (218-256)||(33780312-33780350)
chr3 (146-265)||(36590390-36590514)
chr3 (172-202)||(37133912-37133942)
chr3 (147-210)||(40160790-40160853)
chr3 (145-209)||(27183658-27183720)
chr3 (151-221)||(28206520-28206588)
chr3 (146-208)||(34344756-34344816)
chr3 (183-256)||(45583475-45583548)
chr3 (170-209)||(335029-335069)
chr3 (169-201)||(9738420-9738452)
chr3 (220-264)||(42913445-42913489)
[»] chr5 (41 HSPs)
chr5 (145-265)||(31250147-31250267)
chr5 (145-265)||(38503232-38503352)
chr5 (146-265)||(17077361-17077480)
chr5 (157-265)||(43227866-43227974)
chr5 (145-256)||(33545362-33545472)
chr5 (149-265)||(1984168-1984284)
chr5 (146-265)||(15470597-15470716)
chr5 (146-265)||(42208917-42209035)
chr5 (169-265)||(43263213-43263302)
chr5 (146-265)||(5039681-5039799)
chr5 (146-263)||(5263171-5263288)
chr5 (178-263)||(15106895-15106980)
chr5 (147-256)||(1572119-1572228)
chr5 (146-266)||(20191441-20191560)
chr5 (146-265)||(4395827-4395946)
chr5 (22-101)||(42444015-42444093)
chr5 (146-265)||(12375383-12375507)
chr5 (145-265)||(930913-931033)
chr5 (146-202)||(15680877-15680933)
chr5 (169-256)||(34729481-34729567)
chr5 (145-210)||(42355728-42355793)
chr5 (169-265)||(87791-87887)
chr5 (229-265)||(13576323-13576359)
chr5 (146-202)||(15696275-15696330)
chr5 (226-265)||(15696207-15696246)
chr5 (147-201)||(26671646-26671701)
chr5 (147-201)||(26943243-26943298)
chr5 (170-209)||(35168632-35168671)
chr5 (217-256)||(42643850-42643889)
chr5 (230-264)||(7608123-7608157)
chr5 (146-209)||(18478059-18478120)
chr5 (146-209)||(19058982-19059043)
chr5 (146-209)||(29096286-29096347)
chr5 (146-209)||(29629923-29629984)
chr5 (146-195)||(42902041-42902090)
chr5 (228-268)||(9628114-9628154)
chr5 (146-194)||(11935196-11935244)
chr5 (145-201)||(18175271-18175327)
chr5 (170-209)||(20762337-20762377)
chr5 (167-202)||(26302490-26302526)
chr5 (146-209)||(37303990-37304050)
[»] chr1 (54 HSPs)
chr1 (145-265)||(24134599-24134719)
chr1 (145-265)||(49619972-49620092)
chr1 (146-265)||(14262697-14262816)
chr1 (145-265)||(43109213-43109333)
chr1 (146-265)||(30735828-30735947)
chr1 (146-265)||(40061443-40061562)
chr1 (145-261)||(19424050-19424166)
chr1 (146-265)||(10123029-10123147)
chr1 (146-265)||(34702289-34702408)
chr1 (147-265)||(8893860-8893978)
chr1 (149-263)||(50065012-50065126)
chr1 (146-267)||(3347679-3347800)
chr1 (145-265)||(4126899-4127019)
chr1 (145-265)||(7438621-7438741)
chr1 (145-265)||(48497188-48497308)
chr1 (146-265)||(23368708-23368827)
chr1 (146-265)||(47651872-47651990)
chr1 (146-265)||(50011507-50011626)
chr1 (145-255)||(25031472-25031582)
chr1 (145-265)||(29332286-29332404)
chr1 (145-265)||(15417792-15417912)
chr1 (146-265)||(27054690-27054815)
chr1 (145-265)||(49239822-49239935)
chr1 (169-265)||(12148572-12148668)
chr1 (146-265)||(12973254-12973373)
chr1 (169-264)||(52164370-52164465)
chr1 (145-266)||(35195586-35195707)
chr1 (145-209)||(16985910-16985974)
chr1 (146-265)||(2017661-2017779)
chr1 (146-224)||(9527467-9527543)
chr1 (145-210)||(42946442-42946507)
chr1 (149-256)||(50302830-50302937)
chr1 (147-202)||(29936658-29936713)
chr1 (146-264)||(4684153-4684271)
chr1 (147-269)||(22779219-22779341)
chr1 (145-246)||(25299878-25299979)
chr1 (145-209)||(29491526-29491587)
chr1 (145-210)||(31964591-31964656)
chr1 (146-209)||(32635196-32635258)
chr1 (146-194)||(15550940-15550988)
chr1 (169-209)||(35309780-35309820)
chr1 (146-209)||(2350351-2350414)
chr1 (145-209)||(15368861-15368923)
chr1 (226-265)||(15550886-15550925)
chr1 (145-208)||(25800308-25800371)
chr1 (145-200)||(47428870-47428925)
chr1 (218-264)||(22386284-22386330)
chr1 (147-201)||(52720748-52720802)
chr1 (145-209)||(17350117-17350179)
chr1 (220-265)||(39304253-39304298)
chr1 (237-265)||(22853828-22853856)
chr1 (146-208)||(32660887-32660948)
chr1 (169-261)||(35527335-35527426)
chr1 (237-265)||(44583588-44583616)
[»] scaffold0001 (1 HSPs)
scaffold0001 (146-265)||(419712-419831)
[»] scaffold0204 (1 HSPs)
scaffold0204 (229-270)||(10571-10612)
[»] scaffold0108 (1 HSPs)
scaffold0108 (154-194)||(18330-18370)
[»] scaffold0007 (1 HSPs)
scaffold0007 (145-264)||(146774-146892)
[»] scaffold0339 (1 HSPs)
scaffold0339 (156-194)||(12648-12686)
[»] scaffold0018 (1 HSPs)
scaffold0018 (146-265)||(121770-121894)
[»] scaffold0809 (1 HSPs)
scaffold0809 (145-202)||(4783-4838)
[»] scaffold0687 (1 HSPs)
scaffold0687 (151-208)||(1478-1533)


Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-140; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 372
Target Start/End: Original strand, 11052417 - 11052786
Alignment:
Q  1 aaacatcaataccttgatttttctcccttcttttgccctcaattctaaacatcattatctctcttattttcttcaatttttgtctaaaatcactctacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11052417 aaacatcaataccttgatttttctcccttcttttgccctcaattctaaacatcattatctctcttattttcttcaatttttgtctaaaatcactctacct 11052516  T
Q  101 tcccattcaaaaagataaaggatcattgccctatannnnnnnnnggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt 200  Q
    ||||||||||||||||| |||||| ||||||||||          |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  11052517 tcccattcaaaaagatagaggatccttgccctatatttttttt--gtcaagtaacctagtggctagagaaattcaccttaaagatgaataagtggggtgt 11052614  T
Q  201 ccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctcacgagactccttgtcctaattttacaccccacttaa 300  Q
      ||||||||||||||| |||||| |||   |||||||||||||||| |||||||||||||||||   |||||||| |||||||||||||||||||||||    
T  11052615 ttagggttcacaccttggcccctgcacaatatgtgcattatcccttaccaaatgagttaagctcatatgactccttatcctaattttacaccccacttaa 11052714  T
Q  301 ttgactgatgtcagtatgttggagtttcaataatgcttaattgcgtatttttaatgcatagatccatctatt 372  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||    
T  11052715 ttgactgatatcagtatgttggagtttttataatgcttaattgcgtatttttaatgcatagatccatgtatt 11052786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 4259978 - 4259859
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||   |||  | |||||| ||||||||||||||||||||    
T  4259978 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggagtccggggttggaaccccggcccctgcacatattgtgcattatccct 4259879  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||||||||||||    
T  4259878 taccaaatgagttaagctca 4259859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 263
Target Start/End: Original strand, 38289211 - 38289328
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||||||||||    |||||  |||  |||||||| ||||||||||||||||||||    
T  38289211 gtcaagtagcttagtggctagagaaattcaccttaaagatgaataagtggggtgtttgaggttcgaaccccgacccctgcacatattgtgcattatccct 38289310  T
Q  246 tatcaaatgagttaagct 263  Q
    || |||||||| ||||||    
T  38289311 taccaaatgagctaagct 38289328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 159 - 265
Target Start/End: Original strand, 41454816 - 41454922
Alignment:
Q  159 gtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagtt 258  Q
    ||||||||  |||||||| ||||||||||||||||||||||||| ||||||  |||  | |||||| |||||||||||||||||||||| |||||||| |    
T  41454816 gtggctagagaaattcacattaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagct 41454915  T
Q  259 aagctca 265  Q
    |||||||    
T  41454916 aagctca 41454922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 1032690 - 1032570
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||| || | |||||||||  |||||||||||||||||||||||||||||||||  ||||||  |||    |||||| |||||||||||||||||||    
T  1032690 ggtcaagcagtccagtggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacatattgtgcattatccc 1032591  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  1032590 ttaccaaatgagctaagctca 1032570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 265
Target Start/End: Complemental strand, 3311558 - 3311440
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    ||||||||| || ||||||| |||||||| ||| |||||||||||||||||||||| ||||||  ||| ||| ||||| | | ||||| |||||||||||    
T  3311558 tcaagtagcatactggctagaaaaattcatctttaagatgaataagtggggtgtccggggttcgaaccctgatccctgcataaattgtacattatccctt 3311459  T
Q  247 atcaaatgagttaagctca 265  Q
      |||||||||||||||||    
T  3311458 gccaaatgagttaagctca 3311440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 34037923 - 34038043
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||| ||||||| ||| ||||||||| ||||||||||||||||||| ||||  || |||  ||   | |||||| |||||||||| ||||||||    
T  34037923 ggtcaagtagtctagtggttagaaaaattcactttaaagatgaataagtgggatgtctgggattcgaactccgccccctgcacatattgtgtattatccc 34038022  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||||||||| |||||||||||    
T  34038023 ttatcaaataagttaagctca 34038043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 22652802 - 22652683
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||| ||||||||||  ||||||||||| || |||||||| |||||||||| ||||||  ||   | |||||| ||| ||| ||||||||||||    
T  22652802 gtcaagtagcttagtggctagagaaattcacctttaacatgaataattggggtgtccggggttcgaacaccggcccctgcacaaattatgcattatccct 22652703  T
Q  246 tatcaaatgagttaagctca 265  Q
    ||||||||||| ||||||||    
T  22652702 tatcaaatgagctaagctca 22652683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 39104725 - 39104607
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| |||||||||||  |||| |||||||||||||||||||| |||||||| ||||||  |||  | || ||| ||||||||||||||||||||    
T  39104725 gtcaagtagtctagtggctagagaaatccaccttaaagatgaataagt-gggtgtccggggttcgaaccccggccgctgcacatattgtgcattatccct 39104627  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||| ||||    
T  39104626 taccaaatgagctaaactca 39104607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 41845428 - 41845524
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    ||||||||||||||||||||||| | |||||| | ||||||  |||  || ||||| |||||||||||||||||||||| |||||||| ||||||||    
T  41845428 aaattcaccttaaagatgaataaatagggtgttcggggttcgaaccccgatccctgcacatattgtgcattatcccttaccaaatgagctaagctca 41845524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 36587626 - 36587745
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||||||||||||| |  ||||||| ||||||||| |||||||||||||| | |||||   |||  |||||||  ||||||||||  ||||| ||    
T  36587626 gtcaagtagcctagtggctcgagaaattcatcttaaagataaataagtggggtgttcggggttggaaccccgacccctacacatattgtgttttatctct 36587725  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||||||||||||    
T  36587726 taccaaatgagttaagctca 36587745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 38064096 - 38063977
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| | ||||| |||  |||||||||||||||||||||||||||||||||  |||||||  ||     ||||| ||| ||||||||||||||||    
T  38064096 gtcaagtagtccagtggttagagaaattcaccttaaagatgaataagtggggtgtctggggttcaacccccagtccctgcacaaattgtgcattatccct 38063997  T
Q  246 tatcaaatgagttaagctca 265  Q
    || ||||||| |||||||||    
T  38063996 taccaaatgaattaagctca 38063977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 43413861 - 43413916
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt 200  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  43413861 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgt 43413916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 265
Target Start/End: Original strand, 36103927 - 36104017
Alignment:
Q  175 accttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    ||||||||||||||||||||||||||   ||||||  |||  | |||||| |||||||||||||||||| ||| |||||||||||||||||    
T  36103927 accttaaagatgaataagtggggtgtttggggttcgaaccccggcccctgcacatattgtgcattatcctttaccaaatgagttaagctca 36104017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 266
Target Start/End: Original strand, 19957300 - 19957417
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    |||||||||||  |||||  ||||||||||||||| |||||||||||||||||| ||||||  |||| | |||||| | ||| | ||||||||||||||     
T  19957300 aagtagcctagctgctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaacctcgtcccctgcatataatatgcattatcccttac 19957399  T
Q  249 caaatgagttaagctcac 266  Q
    ||| |||| |||| ||||    
T  19957400 caagtgagctaagttcac 19957417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 1360111 - 1360229
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||||||||||| |||  |||||||| ||||| ||||||||||||||||||| ||||||  |||    |||||  |||||||||||||||||| |    
T  1360111 gtcaagtagcctagtggttagagaaattcactttaaa-atgaataagtggggtgtccggggttcgaaccccagcccctacacatattgtgcattatcctt 1360209  T
Q  246 tatcaaatgagttaagctca 265  Q
    |  |||||||| ||||||||    
T  1360210 tgccaaatgagctaagctca 1360229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 23139196 - 23139074
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaa--agatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatc 242  Q
    |||||||||||  |||| ||||  |||||||||||||  | ||||||||||||||||||  | ||||  |||| | |||||| ||| |||||||||||||    
T  23139196 ggtcaagtagctcagtgactagagaaattcaccttaataaaatgaataagtggggtgtctggtgttcgaacctcggcccctgcacacattgtgcattatc 23139097  T
Q  243 ccttatcaaatgagttaagctca 265  Q
    |||| ||||||||| ||||||||    
T  23139096 ccttgtcaaatgagctaagctca 23139074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 5904350 - 5904460
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||| |||| |||| |||||  ||||||| |||||||||||||||||||| ||||| ||||||  |||  | |||||| |||||||||||||||||  |    
T  5904350 gtcaaatagcttagtagctagagaaattcatcttaaagatgaataagtgggatgtccggggttcgaaccccgtcccctgcacatattgtgcattatcttt 5904449  T
Q  246 tatcaaatgag 256  Q
    || ||||||||    
T  5904450 taccaaatgag 5904460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 13906597 - 13906721
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcca------gggttcacaccttgacccctgtacatattgtgcatt 239  Q
    ||||| |||||||||||||||  |||||||||||||| ||||||||||| |||||||       ||||||  |||  | |||||| ||||||||||||||    
T  13906597 gtcaaatagcctagtggctagagaaattcaccttaaa-atgaataagtgaggtgtccgtgcccggggttcgaaccccggcccctgcacatattgtgcatt 13906695  T
Q  240 atcccttatcaaatgagttaagctca 265  Q
    |||||||| |||||||| ||||||||    
T  13906696 atcccttaccaaatgagctaagctca 13906721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 263
Target Start/End: Original strand, 19733045 - 19733162
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||| |||||| |||  ||||||||||||||||||||||| |  ||||| | || |||  |||  |||||||| | ||||| ||||||||||||    
T  19733045 gtcaagtagcttagtggttagagaaattcaccttaaagatgaataatttaggtgttcgggattcgaaccccgacccctgcatatattatgcattatccct 19733144  T
Q  246 tatcaaatgagttaagct 263  Q
    || |||||||| ||||||    
T  19733145 taccaaatgagctaagct 19733162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 43456630 - 43456746
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    |||||||| |||||||  ||  ||| |||||||||| ||||||||||||||||||| ||||||  |||  ||||| |  | |||||||||||||||||||    
T  43456630 tcaagtagtctagtggacagagaaaatcaccttaaa-atgaataagtggggtgtccggggttcgaaccccgacccttacatatattgtgcattatccctt 43456728  T
Q  247 atcaaatgagttaagctc 264  Q
    | |||||||| |||||||    
T  43456729 accaaatgagctaagctc 43456746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 255
Target Start/End: Complemental strand, 45536837 - 45536728
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||| | |||||||||||  ||||||||  | |||||||||||||||||||||| ||||||  ||   | |||||| ||| ||| ||||||||||||    
T  45536837 gtcaagttgtctagtggctagagaaattcactattaagatgaataagtggggtgtccggggttcgaactccggcccctgcacaaattttgcattatccct 45536738  T
Q  246 tatcaaatga 255  Q
    ||||||||||    
T  45536737 tatcaaatga 45536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 10621374 - 10621470
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||| |||||| |||| || |||||||||| ||||||| ||| ||||||||| | | ||  |||||||||||||||||| |||| ||||||||    
T  10621374 aaattcacattaaaggtgaaaaaatggggtgtccggggttcaaaccctgacccctgcatacataatgcattatcccttatcaagtgagctaagctca 10621470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 256
Target Start/End: Original strand, 43508425 - 43508534
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||| | ||||||||||||  ||||||||||| ||| |||||||||||||||||| ||||||| |||  | |||||  | ||||| |||||| ||||    
T  43508425 ggtcaagcaacctagtggctag--aaattcacctttaaggtgaataagtggggtgtccggggttcaaaccccggcccctacatatattatgcattgtccc 43508522  T
Q  245 ttatcaaatgag 256  Q
    ||||||| ||||    
T  43508523 ttatcaactgag 43508534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 279996 - 280082
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgag 256  Q
    |||||||||||||| |||||||| | |||||||| ||||||  ||| | ||||||| ||||||||| |||||||||||| ||||||||    
T  279996 aaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccct-acccctgcacatattgtacattatcccttaccaaatgag 280082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 635856 - 635770
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgag 256  Q
    |||||||||||||| |||||||| | |||||||| ||||||  ||| | ||||||| ||||||||| |||||||||||| ||||||||    
T  635856 aaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccct-acccctgcacatattgtacattatcccttaccaaatgag 635770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 821659 - 821573
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgag 256  Q
    |||||||||||||| |||||||| | |||||||| ||||||  ||| | ||||||| ||||||||| |||||||||||| ||||||||    
T  821659 aaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccct-acccctgcacatattgtacattatcccttaccaaatgag 821573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 8350556 - 8350438
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaa-gatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||| ||||||| |||  ||||||| |||||| ||||||||||||||||||||  |||||  ||   | |||||| | |||||||| |||||| |    
T  8350556 gtcaagtagtctagtggttagataaattcatcttaaaagatgaataagtggggtgtccgaggttcgaactccggcccctgcatatattgtgtattatcac 8350457  T
Q  245 ttatcaaatgagttaagct 263  Q
    ||| |||||||||||||||    
T  8350456 ttaccaaatgagttaagct 8350438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 38544901 - 38545018
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||  |||||| |||  |||| |||||||||||| |||||||||| ||| | || |||  ||| ||| || || ||||||||||||||||||||    
T  38544901 gtcaagtagtttagtggttagagaaatccaccttaaagataaataagtggg-tgttcgggattcgaaccctgatccatgcacatattgtgcattatccct 38544999  T
Q  246 tatcaaatgagttaagctc 264  Q
    || |||||||| |||||||    
T  38545000 taccaaatgaggtaagctc 38545018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 33820394 - 33820495
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctcacga 268  Q
    ||||||||||| ||||||||||| |||||||||  || |||  |||  |||| ||| ||| |||||| |||||||| || |||||||| |||||||||||    
T  33820394 aaattcacctttaagatgaataattggggtgtctgggattcgaaccccgacctctgcacaaattgtgtattatcccataccaaatgagctaagctcacga 33820493  T
Q  269 ga 270  Q
    ||    
T  33820494 ga 33820495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 44828407 - 44828528
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaa-gatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcc 243  Q
    |||||||||| ||| ||||||   |||||||||||||| |||||||||||| ||||||  ||||||  |||     ||||| ||| ||||||||||||||    
T  44828407 ggtcaagtagtctaatggctaaagaaattcaccttaaaagatgaataagtgtggtgtctggggttcgaaccccagaccctgcacaaattgtgcattatcc 44828506  T
Q  244 cttatcaaatgagttaagctca 265  Q
    |||| |||||||| ||||||||    
T  44828507 cttaccaaatgagctaagctca 44828528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 17855769 - 17855705
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||| ||||| |||||| ||||||||| |||||  |||||||||||||||||| ||||||    
T  17855769 ggtcaagtaacctagcggctagaaaaattcactttaaatgtgaataagtggggtgtccggggttc 17855705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 30466766 - 30466679
Alignment:
Q  178 ttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    ||||||||||||||||||||||||   |||||  |||    |||||| ||||||||||||||| |||||| |||||||| ||||||||    
T  30466766 ttaaagatgaataagtggggtgtctgaggttcgaaccccagcccctgcacatattgtgcattagcccttaccaaatgagctaagctca 30466679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 8349459 - 8349513
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt 200  Q
    ||||||||| ||||||| |||  ||||||| ||||||||||||||||||||||||    
T  8349459 gtcaagtagtctagtggttagataaattcatcttaaagatgaataagtggggtgt 8349513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 10162088 - 10161964
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcca------gggttcacaccttgacccctgtacatattgtgcatt 239  Q
    |||||||| ||||||||||||  |||||||||||||| ||||||||||| |||| ||       ||||||  |||   ||||||| ||||||||||||||    
T  10162088 gtcaagtaacctagtggctagagaaattcaccttaaa-atgaataagtgaggtgcccgtgcccggggttcgaaccccaacccctgcacatattgtgcatt 10161990  T
Q  240 atcccttatcaaatgagttaagctca 265  Q
    |||||||| || ||||| ||||||||    
T  10161989 atcccttaccagatgagctaagctca 10161964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 16973070 - 16973028
Alignment:
Q  217 gacccctgtacatattgtgcattatcccttatcaaatgagtta 259  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  16973070 gacccctgcacatattgtgcattatcccttaacaaatgagtta 16973028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 40103559 - 40103522
Alignment:
Q  228 atattgtgcattatcccttatcaaatgagttaagctca 265  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  40103559 atattgtgcattatcccttatcaaatgagctaagctca 40103522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 8145892 - 8145836
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcc 202  Q
    |||||||||| ||| || |||  ||||||||||||||| ||||||||||||||||||    
T  8145892 gtcaagtagcgtagcggttagagaaattcaccttaaaggtgaataagtggggtgtcc 8145836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 29114220 - 29114106
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| | ||||| ||| | |||||||||| | ||| |||||||||||||| |  ||| |  |||  | |||||| ||| ||||||||||||||||    
T  29114220 gtcaagtagtcgagtggttagaagaattcacctttacgat-aataagtggggtgttcgaggtacgaaccgcggcccctgcacaaattgtgcattatccct 29114122  T
Q  246 tatcaaatgagttaag 261  Q
    ||||||||||| ||||    
T  29114121 tatcaaatgagctaag 29114106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 39165099 - 39165043
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacct-taaagatgaataagtggggtgtcc 202  Q
    ||||||||||||||||||||||  |||||||||| | ||| ||||||||||||||||||    
T  39165099 ggtcaagtagcctagtggctag--aaattcacctcttaaggtgaataagtggggtgtcc 39165043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 32328053 - 32328091
Alignment:
Q  156 ctagtggctagtaaaattcaccttaaagatgaataagtg 194  Q
    ||||||||||| |||||||| ||||||||||||||||||    
T  32328053 ctagtggctagaaaaattcagcttaaagatgaataagtg 32328091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 34073238 - 34073292
Alignment:
Q  170 aattcacctta-aagatgaataagtggggtgtccagggttcacaccttgacccct 223  Q
    ||||||||||| ||| |||||||||||||||||| ||||||  ||||||||||||    
T  34073238 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccttgacccct 34073292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 39258697 - 39258640
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagg 205  Q
    |||| ||||||||||||||||   |||| |||||| |||||||||||||||||||||||||    
T  39258697 gtcaggtagcctagtggctag---aatttaccttataagatgaataagtggggtgtccagg 39258640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 2800137 - 2800075
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||  |||||||| || ||  |||||||||||||||||| ||||||    
T  2800137 ggtcaggtagcctagtggctag--aaattcacttttaaagtgaataagtggggtgtccggggttc 2800075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 11690933 - 11690986
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcc 202  Q
    |||||||||||| ||||   ||||||||||||||| ||||||| ||||||||||    
T  11690933 aagtagcctagtagctaaagaaattcaccttaaaggtgaataaatggggtgtcc 11690986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 5184886 - 5184926
Alignment:
Q  170 aattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  5184886 aattcaccttataaggtgaataagtggggtgtccagggttc 5184926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 7603849 - 7603794
Alignment:
Q  151 gtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggtt 208  Q
    ||||||||||||||||   |||||||| || |||||||||||||||||||||| |||||    
T  7603849 gtagcctagtggctag---aattcaccctataagatgaataagtggggtgtccggggtt 7603794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 14684193 - 14684248
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtcc 202  Q
    ||||| |||||||||||||||    ||||||||||| ||||||||||||||||||||||    
T  14684193 ggtcaggtagcctagtggctat---aattcaccttataagatgaataagtggggtgtcc 14684248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 27102310 - 27102362
Alignment:
Q  148 caagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt 200  Q
    ||||||| |||||||||||  ||||||||||| || ||||| |||||||||||    
T  27102310 caagtagtctagtggctagagaaattcacctttaacatgaaaaagtggggtgt 27102362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 31129419 - 31129358
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||| |||||||||||||||  ||||||||| || ||  |||||||||||||||||| ||||||    
T  31129419 gtcaggtagcctagtggcta--aaaattcacttttaaagtgaataagtggggtgtccggggttc 31129358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 39172189 - 39172245
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcc 202  Q
    |||||||||||||| |||||   |||||||| |||||| ||||||| ||||||||||    
T  39172189 gtcaagtagcctaggggctaaagaaattcactttaaaggtgaataaatggggtgtcc 39172245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 6228235 - 6228355
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||  | |||||| |||||||||||||||||||    
T  6228235 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccc 6228334  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  6228335 ttaccaaatgagctaagctca 6228355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 18903342 - 18903462
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||  | |||||| |||||||||| ||||||||    
T  18903342 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgtattatccc 18903441  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||  |||||||| ||||||||    
T  18903442 ttgccaaatgagctaagctca 18903462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 20415537 - 20415657
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  ||| || |||||| |||||||||||||||||||    
T  20415537 ggtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccctggcccctgcacatattgtgcattatccc 20415636  T
Q  245 ttatcaaatgagttaagctca 265  Q
    |||  ||||||| ||| ||||    
T  20415637 ttacaaaatgagctaaactca 20415657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 7954901 - 7955018
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||||| ||| | |||||| ||||| | |||||| ||||||||||||||||||||||     
T  7954901 aagtagcctagtggctagagaaattcatcttaaagatgaataagtgggatgttcggggttcgcacctcgccccctgcacatattgtgcattatcccttac 7955000  T
Q  249 c-aaatgagttaagctca 265  Q
    | ||||||||||||||||    
T  7955001 caaaatgagttaagctca 7955018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 17217077 - 17216958
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| | ||||  ||   |||||||  ||||||| ||||||||||||    
T  17217077 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggagttcgaactccgacccctacacatattatgcattatccct 17216978  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||||||||    
T  17216977 taccaaatgagctaagctca 17216958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 4854282 - 4854401
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| ||||||| |||  ||||| |||||||||||||||||||||||||||| ||||||  |||  | |||||| ||| ||||| ||||||||||    
T  4854282 gtcaagtaggctagtggttagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacacattgtacattatccct 4854381  T
Q  246 tatcaaatgagttaagctca 265  Q
    |  |||||||| ||||||||    
T  4854382 tgccaaatgagctaagctca 4854401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 30422084 - 30422203
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||| ||  |||||||||||||| || ||||| || ||||||| | ||||  |||  |||||||  ||||||||| ||||||||||    
T  30422084 gtcaagtagcctagtggccagagaaattcaccttaaaaataaataaatgtggtgtccggagttcgaacccggacccctacacatattgtacattatccct 30422183  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||||||||||||    
T  30422184 taccaaatgagttaagctca 30422203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 265
Target Start/End: Original strand, 24794881 - 24794990
Alignment:
Q  156 ctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatga 255  Q
    |||||||||||  ||||||| |||||| ||||||||||||| ||||| ||||||  | |   ||||||| |||||||||||||||||||||| |||||||    
T  24794881 ctagtggctagagaaattcatcttaaatatgaataagtgggatgtccggggttcgaatcccaacccctgcacatattgtgcattatcccttaccaaatga 24794980  T
Q  256 gttaagctca 265  Q
    | ||||||||    
T  24794981 gctaagctca 24794990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 255
Target Start/End: Original strand, 29321952 - 29322061
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| |||||||||||  ||||||||||||||||| |||||||||| ||||  ||||||  |||    |||||| ||||||||||||||||||||    
T  29321952 gtcaagtagtctagtggctagagaaattcaccttaaagataaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatccct 29322051  T
Q  246 tatcaaatga 255  Q
    || |||||||    
T  29322052 taccaaatga 29322061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 1128392 - 1128510
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatga---ataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatc 242  Q
    ||||||||| |||||| ||||  |||||||||||||||||||   |||| |||||||||  ||||||  |||   ||||||| ||||||| |||||||||    
T  1128392 gtcaagtagtctagtgactagagaaattcaccttaaagatgatgaataaatggggtgtctggggttcgaaccccaacccctgcacatattatgcattatc 1128491  T
Q  243 ccttatcaaatgagttaag 261  Q
    |||||||||||||||||||    
T  1128492 ccttatcaaatgagttaag 1128510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 262
Target Start/End: Complemental strand, 19748217 - 19748102
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||  ||  |||||||||||||| |||||||||||||||||||  |||||  |||   | ||||| ||||||||||||||||||||    
T  19748217 gtcaagtagcctagtggtcagagaaattcaccttaaa-atgaataagtggggtgtccgtggttcgaaccccaatccctgcacatattgtgcattatccct 19748119  T
Q  246 tatcaaatgagttaagc 262  Q
    || |||||||| |||||    
T  19748118 taccaaatgagctaagc 19748102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 11552990 - 11552873
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| |  ||||||  |||  | |||||| ||| ||||| | ||||||||    
T  11552990 gtcaagtagactagtggctagaaaaatttaccttaaagatgaataagtggggtgcctggggttcgaaccccggcccctgcacacattgtacgttatccct 11552891  T
Q  246 tatcaaatgagttaagct 263  Q
    |  |||||||| ||||||    
T  11552890 tgccaaatgagctaagct 11552873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 3974561 - 3974442
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||| ||||||||| | |||  ||||||||||||||||||||||||||||| ||||   ||||  |||  |||||||| ||||||| ||||||| |||    
T  3974561 ggtcaaatagcctagtagttagagaaattcaccttaaagatgaataagtggggagtccgaagttcgaaccccgacccctgcacatattctgcatta-ccc 3974463  T
Q  245 ttatcaaatgagttaagctca 265  Q
     || |||||||||||||||||    
T  3974462 ataccaaatgagttaagctca 3974442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 11611488 - 11611425
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||||| | |||||  |||||||| ||||||||||||||||||||||||||||||||    
T  11611488 gtcaagtagcctaattgctagagaaattcacattaaagatgaataagtggggtgtccagggttc 11611425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 15716984 - 15717108
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcca------gggttcacaccttgacccctgtacatattgtgcatt 239  Q
    ||||| |||||||||||||||  |||||||||||||| ||||||||||| |||||||       ||||||  |||  | |||||| ||||||||||||||    
T  15716984 gtcaaatagcctagtggctagagaaattcaccttaaa-atgaataagtgaggtgtccgtgcccggggttcgaaccccggcccctgcacatattgtgcatt 15717082  T
Q  240 atcccttatcaaatgagttaagctca 265  Q
    |||||||| |||||||| ||||||||    
T  15717083 atcccttaccaaatgagctaagctca 15717108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 31637451 - 31637345
Alignment:
Q  158 agtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagt 257  Q
    |||||||||  |||||||||||||| || ||||||| ||||||||  || ||  |||  |||||||| | ||||||||||||||||| || |||||||||    
T  31637451 agtggctagagaaattcaccttaaaaataaataagtagggtgtccgaggctcgaaccccgacccctgcaaatattgtgcattatcccataccaaatgagt 31637352  T
Q  258 taagctc 264  Q
    |||||||    
T  31637351 taagctc 31637345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 3200059 - 3200178
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||| | || |||||   ||||  || |  | || | ||||||||||||||||| |||    
T  3200059 gtcaagtagcctattggctagagaaattcaccttaaagatgaataaattggctgtccgaagttcgaacttcaatccatatacatattgtgcattattcct 3200158  T
Q  246 tatcaaatgagttaagctca 265  Q
    || ||||| |||||||||||    
T  3200159 taccaaataagttaagctca 3200178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 25045864 - 25045740
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtc---cagg-gttcacaccttgacccctgtacatattgtgcatta 240  Q
    |||||||||||||||||| ||| ||||||||| |||| |||||||||||| ||||||   | || |||   ||||   |||||| |||||||||| ||||    
T  25045864 ggtcaagtagcctagtggttagaaaaattcacgttaatgatgaataagtgaggtgtctgtctggagtttgaacctcagcccctgcacatattgtgaatta 25045765  T
Q  241 tcccttatcaaatgagttaagctca 265  Q
    ||||||| |||||||| ||||||||    
T  25045764 tcccttaccaaatgagctaagctca 25045740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 5641666 - 5641722
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcc 202  Q
    ||||||||| |||| ||||||  ||||||||||||||| ||||||||||||||||||    
T  5641666 gtcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggtgtcc 5641722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 18618546 - 18618634
Alignment:
Q  177 cttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||||||||||| || |||  |||   |||| | ||||||||||||||||||  ||| |||||||| ||||||||    
T  18618546 cttaaagatgaataagtggggtgtccgggattcgaaccccaacccttatacatattgtgcattatcttttaccaaatgagctaagctca 18618634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 9763554 - 9763502
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggt 198  Q
    ||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  9763554 ggtcaagtagcatagtggctagagaaattcaccttaaag-tgaataagtggggt 9763502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 21874277 - 21874314
Alignment:
Q  226 acatattgtgcattatcccttatcaaatgagttaagct 263  Q
    |||||||||||||||||||||| |||||||||||||||    
T  21874277 acatattgtgcattatcccttaccaaatgagttaagct 21874314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 7164812 - 7164760
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtg 199  Q
    |||||||| |||| ||||||  ||||||||||||||| |||||||||||||||    
T  7164812 tcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggtg 7164760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 14981680 - 14981741
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||| ||||||||||||||||  |||||||| || ||  |||||||||||||||||||||||||    
T  14981680 gtcaggtagcctagtggctag--aaattcacttttaaagtgaataagtggggtgtccagggttc 14981741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 3448470 - 3448408
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||| |||||||| |||||||   ||||||||||| |||||||||||||||||||||| ||||||    
T  3448470 ggtcaggtagcctattggctag---aattcaccttataagatgaataagtggggtgtccggggttc 3448408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 18904660 - 18904722
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||   ||||||||||| ||| |||||||||||||||||||| ||||    
T  18904660 ggtcaggtagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccagagttc 18904722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 25020505 - 25020567
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||   ||||||||||| ||| |||||||||||||||||| ||||||    
T  25020505 ggtcaggtagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccggggttc 25020567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 25091086 - 25091131
Alignment:
Q  157 tagtggctagtaaaattcaccttaaagatgaataagtggggtgtcc 202  Q
    ||||||||||  ||| ||||||| ||||||||||||||||||||||    
T  25091086 tagtggctagagaaaatcacctttaagatgaataagtggggtgtcc 25091131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 6658521 - 6658582
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||||||||||||||||||||  |||||| | || |||  ||||||||||||||||| ||||||    
T  6658521 gtcaagtagcctagtggctag--aaattctcttttaaggagaataagtggggtgtccggggttc 6658582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 18991420 - 18991471
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt 200  Q
    |||||||||||||||||||||   ||||||||||| |  ||||||||||||||||    
T  18991420 gtcaagtagcctagtggctag---aattcaccttataagtgaataagtggggtgt 18991471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 22983676 - 22983636
Alignment:
Q  170 aattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  22983676 aattcaccttataagatgaataagtggggtgtccggggttc 22983636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 23804732 - 23804772
Alignment:
Q  170 aattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  23804732 aattcaccttataagatgaataagtggggtgtccggggttc 23804772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 4956067 - 4956174
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  |||  |||||||| |||||||||||||||||||    
T  4956067 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccagggttcgaaccccgacccctgcacatattgtgcattatccc 4956166  T
Q  245 ttatcaaa 252  Q
    ||| ||||    
T  4956167 ttaccaaa 4956174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 31793588 - 31793468
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||| ||||||||||||  |||| ||||||||||||||||||||||||||||| ||||||  |||  |||||||| |||||||||||||||||||    
T  31793588 ggtcaagtaacctagtggctagagaaatccaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgcacatattgtgcattatccc 31793489  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  31793488 ttaacaaatgagctaagctca 31793468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 48433685 - 48433805
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||   |||  | |||||| |||||||||||||||||||    
T  48433685 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggtttgaaccccggcccctgcacatattgtgcattatccc 48433784  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  48433785 ttaccaaatgagctaagctca 48433805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 27454132 - 27454011
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcc 243  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||  |||||  |||| |||||||| ||| ||||||||||||||    
T  27454132 ggtcaagtagcctagtggctagagaaattcaccttttaagatgaataagtggggtgtccgaggttcgaacctcgacccctgcacaaattgtgcattatcc 27454033  T
Q  244 cttatcaaatgagttaagctca 265  Q
    |||| |||||||| ||||||||    
T  27454032 cttaccaaatgagctaagctca 27454011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 23824569 - 23824686
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||  |||| | ||| || |||||||||||||||||||||    
T  23824569 tcaagtaacctagtggctagagaaattcaccttaaagatgaataagtagggtgtcc-gggttcgaacctcggcccatgcacatattgtgcattatccctt 23824667  T
Q  247 atcaaatgagttaagctca 265  Q
    | |||||||| ||||||||    
T  23824668 accaaatgagctaagctca 23824686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 40273917 - 40273821
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||||||||||||||||||| ||||||  |||  | |||||| |||||||||||||||||||||| |||||||| ||||||||    
T  40273917 aaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaagctca 40273821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 253
Target Start/End: Complemental strand, 38378338 - 38378231
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||| |||||| |||  |||||||||||||| ||||||||||||||||||| ||||||| |||  | |||||| ||||||||||||||||||||    
T  38378338 gtcaagtagcttagtgggtagagaaattcaccttaaaaatgaataagtggggtgtccggggttcaaaccccggcccctgcacatattgtgcattatccct 38378239  T
Q  246 tatcaaat 253  Q
    || |||||    
T  38378238 taccaaat 38378231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 36528198 - 36528314
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    |||||| ||||||||||   |||||||||||||| ||||||| ||||| ||||| ||||||  ||   ||||||| |||||||||||||||||||||||     
T  36528198 aagtagtctagtggctaaataaattcaccttaaaaatgaataggtgggatgtccggggttcgaactccgacccctatacatattgtgcattatcccttac 36528297  T
Q  249 caaatgagttaagctca 265  Q
    |||||||||||||||||    
T  36528298 caaatgagttaagctca 36528314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 156 - 265
Target Start/End: Complemental strand, 42554743 - 42554634
Alignment:
Q  156 ctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatga 255  Q
    |||||||||||  ||||||||| ||||||||||||||| |||| ||| ||||||  |||   ||||||| |||||||||||||||||||||| |||||||    
T  42554743 ctagtggctagggaaattcaccataaagatgaataagtcgggtatccggggttcgaaccccaacccctgcacatattgtgcattatcccttaccaaatga 42554644  T
Q  256 gttaagctca 265  Q
    | ||||||||    
T  42554643 gctaagctca 42554634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 24030104 - 24029985
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||| |||| ||||||  ||||||||||||||||||||||| |||||||||  ||||||  |||  | |||||  |||||||||||||||||||    
T  24030104 ggtcaagtagtctag-ggctagagaaattcaccttaaagatgaataaatggggtgtctggggttcgaaccccggcccctacacatattgtgcattatccc 24030006  T
Q  245 ttatcaaatgagttaagctca 265  Q
    |||||||||||| ||| ||||    
T  24030005 ttatcaaatgagctaaactca 24029985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 145 - 271
Target Start/End: Original strand, 3889775 - 3889902
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc-acaccttgacccctgtacatattgtgcattatcc 243  Q
    ||||||||| |||| ||| |||  ||||||||||| |||||||||||||||||||||| |||||| |  ||| | |||||| | ||||||| ||||||||    
T  3889775 ggtcaagtaacctaatggttagagaaattcacctttaagatgaataagtggggtgtccggggttcgaaccctggccccctgcatatattgtacattatcc 3889874  T
Q  244 cttatcaaatgagttaagctcacgagac 271  Q
    ||| ||||||||| |||||||| |||||    
T  3889875 cttgtcaaatgagctaagctcatgagac 3889902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 46266787 - 46266668
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| ||||||| |||  ||||||||||| |||||||||||||||| ||| || |||||  |||  | |||| | ||| ||||||||||||||||    
T  46266787 gtcaagtagtctagtggttagataaattcacctttaagatgaataagtgggatgttcaaggttcgaaccccgtcccccgcacaaattgtgcattatccct 46266688  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||||||||||||    
T  46266687 taccaaatgagttaagctca 46266668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 12166202 - 12166086
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||  |||| |||||  |||||||||||||||||||||||||||||||||  ||||||  |||    |||||| ||| |||||||||||||||    
T  12166202 ggtcaagtagtttagtagctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatccc 12166103  T
Q  245 ttatcaaatgagttaag 261  Q
    ||| |||||||| ||||    
T  12166102 ttaccaaatgagctaag 12166086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 33248801 - 33248897
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    ||||||||||||||||||||||||| |||||||| ||||||  |||  |||| ||| | ||||||||||| |||||||| |||||||| ||||||||    
T  33248801 aaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacctctgcatatattgtgcatcatcccttaccaaatgagctaagctca 33248897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 3961383 - 3961498
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||||||||| |||||  ||||||||||| || ||||||||||||| ||||| ||||||  |||  | || ||| ||| ||||||||||||||     
T  3961383 ggtcaagtagcctagtagctagagaaattcacctttaaaatgaataagtgggatgtccggggttcgaaccccggcctctgcacaaattgtgcattatcct 3961482  T
Q  245 ttatcaaatgagttaa 260  Q
    ||| ||||||||||||    
T  3961483 ttaccaaatgagttaa 3961498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 265
Target Start/End: Complemental strand, 15025274 - 15025156
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    ||||||||||||| || |||  ||||||||||||||| |||||||||||||||| | |||||   |||  | |||||||| | | | |||||||||||||    
T  15025274 tcaagtagcctagcgggtagagaaattcaccttaaaggtgaataagtggggtgttcggggtttgaaccccggcccctgtataaaatatgcattatccctt 15025175  T
Q  247 atcaaatgagttaagctca 265  Q
    | |||||||||||||||||    
T  15025174 accaaatgagttaagctca 15025156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 43440798 - 43440701
Alignment:
Q  156 ctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaat 253  Q
    |||||||||||  |||||||||||||||||||||||||||||||||  |  |||  |||  |||| ||| |||||||||||||||||||||| |||||    
T  43440798 ctagtggctagagaaattcaccttaaagatgaataagtggggtgtctggaattcgaaccccgacctctgcacatattgtgcattatcccttaccaaat 43440701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 5228190 - 5228130
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagg 205  Q
    ||||||||||||||| ||||||  ||||||||||||||| |||||||||||||||||||||    
T  5228190 ggtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccagg 5228130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 253
Target Start/End: Complemental strand, 22156216 - 22156110
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| ||||||| |||  ||||||| |||| ||||||||||||||||||||||| ||||  ||| ||| ||| | ||||||||| ||||||||||    
T  22156216 gtcaagtagtctagtggttagagaaattcatcttatagatgaataagtggggtgtccagcgttcgaaccatgatccc-gcacatattgtacattatccct 22156118  T
Q  246 tatcaaat 253  Q
    || |||||    
T  22156117 taccaaat 22156110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 253
Target Start/End: Complemental strand, 22212131 - 22212025
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| ||||||| |||  ||||||| |||| ||||||||||||||||||||||| ||||  ||| ||| ||| | ||||||||| ||||||||||    
T  22212131 gtcaagtagtctagtggttagagaaattcatcttatagatgaataagtggggtgtccagcgttcgaaccatgatccc-gcacatattgtacattatccct 22212033  T
Q  246 tatcaaat 253  Q
    || |||||    
T  22212032 taccaaat 22212025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 26455982 - 26456100
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    |||||||| |||||||||||  ||||||||||| ||| ||||||| ||| |||||  ||||||| || |    ||||| |||||||||||||| ||||||    
T  26455982 tcaagtagtctagtggctagagaaattcacctttaaggtgaataactggagtgtctggggttcaaacgtcagtccctgcacatattgtgcattgtccctt 26456081  T
Q  247 atcaaatgagttaagctca 265  Q
    | |||||||| ||||||||    
T  26456082 accaaatgagctaagctca 26456100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 48619913 - 48619797
Alignment:
Q  148 caagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctta 247  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||||| |||||    ||||  |||   ||||||| ||||||||| |||||||| |||    
T  48619913 caagtagcttagtggctagagaaattcaccttaaagatgaataagtggagtgtctgaagttcgaacc-caacccctgcacatattgtacattatccttta 48619815  T
Q  248 tcaaatgagttaagctca 265  Q
     |||||||||||| ||||    
T  48619814 ccaaatgagttaaactca 48619797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 26606085 - 26606149
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttca 210  Q
    ||||||||||| || ||||||  ||||||||||||||| ||||||||||| ||||||||||||||    
T  26606085 gtcaagtagccaagcggctagagaaattcaccttaaaggtgaataagtggagtgtccagggttca 26606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 28914852 - 28914916
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||||||||||||||  ||||||||||| ||  |||||||||||||||||| ||||||    
T  28914852 ggtcaagtagcctagtggctagagaaattcacctttaaagtgaataagtggggtgtccggggttc 28914916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 37918799 - 37918684
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccaggg-ttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||  |||||| |||  |||||||||| ||||||||||||||| ||||||| ||| |||  |||  ||| |||  |||| ||||||||||||||    
T  37918799 gtcaagtagtttagtggttagagaaattcacctaaaagatgaataagtgaggtgtccggggattcgaaccccgacgcctacacat-ttgtgcattatccc 37918701  T
Q  245 ttatcaaatgagttaag 261  Q
    |||||||||||||||||    
T  37918700 ttatcaaatgagttaag 37918684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 1575741 - 1575694
Alignment:
Q  218 acccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  1575741 acccctgtacatattgtgtattatcccttaccaaatgagttaagctca 1575694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 266
Target Start/End: Complemental strand, 23602394 - 23602273
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||| ||||||||||   ||||||||||||||| |||||||||| ||||||| ||||||  ||   |  | ||| | ||| | |||||||| ||    
T  23602394 ggtcaagtagtctagtggctaaagaaattcaccttaaaggtgaataagtgaggtgtccggggttcgaactccggtcactgcatataatatgcattattcc 23602295  T
Q  245 ttatcaaatgagttaagctcac 266  Q
    |||||||||||| |||||||||    
T  23602294 ttatcaaatgagctaagctcac 23602273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 10091433 - 10091496
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||| |||| ||||||||||  ||||||||||||||| ||||||||| ||||||| |||||||    
T  10091433 gtcaaatagcgtagtggctagagaaattcaccttaaaggtgaataagttgggtgtctagggttc 10091496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 29658249 - 29658311
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||||||||||||||   ||||||||||| ||| |||||||||||||||||| ||||||    
T  29658249 ggtcaagtagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccggggttc 29658311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 34322023 - 34322110
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgag 256  Q
    |||||||| || ||||||||||| |||||||||  || |||| |||     ||||| |||||||||||||||||||||||||||||||    
T  34322023 aaattcacgtttaagatgaataaatggggtgtctgggattcaaaccccagtccctgcacatattgtgcattatcccttatcaaatgag 34322110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 33202532 - 33202593
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    |||| ||||||||||||||||   ||||||||||| |||||||||||||||||||||| ||||||    
T  33202532 gtcaggtagcctagtggctag---aattcaccttataagatgaataagtggggtgtccggggttc 33202593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 37665860 - 37665742
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    |||||| ||||||||||   |||||||||||||||  ||||||||||||||||| |||||   |||  | |||||| | ||| | ||  |||||| |||     
T  37665860 aagtagtctagtggctaaagaaattcaccttaaaggcgaataagtggggtgtccggggtttgaaccccggcccctgcatataatatgttttatcctttac 37665761  T
Q  249 caaatgagttaagctcacg 267  Q
    |||||||||||||||||||    
T  37665760 caaatgagttaagctcacg 37665742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 4590589 - 4590645
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtcc 202  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  4590589 gtcaggtagcctagtggctag-aaaattcaccttataagatgaataagtgtggtgtcc 4590645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 14707412 - 14707293
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||| |||  ||||||  ||||||||  ||||| |||||||||||||||||| ||||||  |||   ||||||| | |||   |||||||||||    
T  14707412 ggtcaagtagtctaacggctagagaaattcactataaaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatata-aatgcattatccc 14707314  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  14707313 ttaccaaatgagctaagctca 14707293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 42338266 - 42338342
Alignment:
Q  189 taagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||| || |||  |||  | |||||| |||||||||||||||| ||||| |||||||| ||||||||    
T  42338266 taagtggggtgtccgggattcgaaccccgtcccctgcacatattgtgcattattccttaccaaatgagctaagctca 42338342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 169 - 200
Target Start/End: Original strand, 25775612 - 25775643
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgt 200  Q
    ||||||||||||||||||||||||||||||||    
T  25775612 aaattcaccttaaagatgaataagtggggtgt 25775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 27907874 - 27907928
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtcc 202  Q
    |||| |||||||||||||||   |||||||||||| ||||||||||||||||||||||    
T  27907874 gtcaggtagcctagtggcta---aaattcaccttataagatgaataagtggggtgtcc 27907928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 28712486 - 28712368
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||| ||||| ||||  |||||||| |||||||||||||| || ||  ||||   |||  || | || ||||| ||||||| | ||||||||||    
T  28712486 gtcaagtagcttagtgactagagaaattcactttaaagatgaataaatgaggcatccaaaattcgaac-tcgatccctgcacatattatacattatccct 28712388  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||||||||||||    
T  28712387 taccaaatgagttaagctca 28712368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 34948224 - 34948162
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||   ||||||||||| ||| |||||||||||||||||| ||||||    
T  34948224 ggtcaggtagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccggggttc 34948162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 46196014 - 46195932
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaa 251  Q
    ||||||||||||||| ||||  |||||||||||| ||||||| |||  |||||||| | | ||  | ||||||||||||||||    
T  46196014 aaattcaccttaaaggtgaaatagtggggtgtccggggttcaaaccccgacccctgcatacataatacattatcccttatcaa 46195932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 20529992 - 20529959
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtcc 202  Q
    ||||||||||||||| ||||||||||||||||||    
T  20529992 aaattcaccttaaaggtgaataagtggggtgtcc 20529959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 21285336 - 21285392
Alignment:
Q  151 gtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||||||||   ||||||||||| ||| |||||||||||||||||| ||||||    
T  21285336 gtagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccggggttc 21285392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 24397063 - 24397001
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||  |||||||| || ||  ||||||||| |||||||||||||||    
T  24397063 ggtcaggtagcctagtggctag--aaattcacttttaaagtgaataagtagggtgtccagggttc 24397001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 38110246 - 38110283
Alignment:
Q  234 tgcattatcccttatcaaatgagttaagctcacgagac 271  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  38110246 tgcattatcccttaccaaatgagctaagctcacgagac 38110283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 1576425 - 1576373
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggt 198  Q
    ||||| |||||| ||||||||  |||||||||||||| | |||||||||||||    
T  1576425 gtcaaatagcctggtggctagagaaattcaccttaaaaacgaataagtggggt 1576373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 3902323 - 3902367
Alignment:
Q  220 ccctgtacatattgtgcattatcccttatcaaatgagttaagctc 264  Q
    ||||| ||||||| |||||||||||||| |||||||| |||||||    
T  3902323 ccctgcacatattttgcattatcccttaccaaatgagctaagctc 3902367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 9992641 - 9992609
Alignment:
Q  234 tgcattatcccttatcaaatgagttaagctcac 266  Q
    ||||||||||||||||||||||| |||||||||    
T  9992641 tgcattatcccttatcaaatgagctaagctcac 9992609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 33413951 - 33413903
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtg 194  Q
    ||||| ||||||| |||||||  ||||||||||| ||||||||||||||    
T  33413951 gtcaaatagcctaatggctagagaaattcacctttaagatgaataagtg 33413903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 42841780 - 42841812
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtc 201  Q
    ||||||||||| |||||||||||||||||||||    
T  42841780 aaattcacctttaagatgaataagtggggtgtc 42841812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 16556570 - 16556451
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||  |||  |||||||| ||||||||||||||||||||    
T  16556570 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgttcggggttcgaaccccgacccctgcacatattgtgcattatccct 16556471  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||||||||    
T  16556470 taccaaatgagctaagctca 16556451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 36993160 - 36993041
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||| |||||||||| ||||||| |||   ||||||  ||||||||||||||||||||    
T  36993160 gtcaggtagcctagtggctagagaaattcaccttaaagatgaataattggggtgtccggggttcaaaccccaaccccttcacatattgtgcattatccct 36993061  T
Q  246 tatcaaatgagttaagctca 265  Q
    ||||||||||| ||||||||    
T  36993060 tatcaaatgagctaagctca 36993041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 40406935 - 40407056
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc-acaccttgacccctgtacatattgtgcattatcc 243  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| |||||| |  ||  | |||||| ||||||||||||||||||    
T  40406935 ggtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacccccggcccctgcacatattgtgcattatcc 40407034  T
Q  244 cttatcaaatgagttaagctca 265  Q
    |||| |||||||| ||||||||    
T  40407035 cttaccaaatgagctaagctca 40407056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 46283242 - 46283122
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||| |||||| ||||  |||||||||||||||||||||||||||||||||| ||||||  |||  | || ||| |||||||||||||||||||    
T  46283242 ggtcaagtagtctagtgactagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccgctgcacatattgtgcattatccc 46283143  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  46283142 ttaccaaatgaggtaagctca 46283122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 50815827 - 50815707
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||| ||||||  |||  | |||||| ||| ||||||||||||||     
T  50815827 ggtcaagtagcctagtggctagagaaattcacctttaagatgaatatgtggggtgtccggggttcgaaccccggcccctgcacaaattgtgcattatcct 50815728  T
Q  245 ttatcaaatgagttaagctca 265  Q
    |||||||||||| ||||||||    
T  50815727 ttatcaaatgagctaagctca 50815707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 51974867 - 51974747
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||| |||||  |||||  | |  |||||||| |||||||||||||||||||    
T  51974867 ggtcaagtagcctagtggctagataaattcaccttaaagataaataagtgggatgtccgaggttcgaatcccgacccctgcacatattgtgcattatccc 51974768  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  51974767 ttaccaaatgagctaagctca 51974747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 145 - 264
Target Start/End: Original strand, 11491194 - 11491313
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  ||   | |||||| ||| ||| |||||||||||    
T  11491194 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccggcccctgcacaaattatgcattatccc 11491293  T
Q  245 ttatcaaatgagttaagctc 264  Q
    || ||||||||| |||||||    
T  11491294 ttgtcaaatgagctaagctc 11491313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 43362167 - 43362263
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||||||||||||||||||| ||||||  |||  |||||||| | |||||||||||||||||||| |||||||| ||||||||    
T  43362167 aaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgaatatattgtgcattatcccttagcaaatgagctaagctca 43362263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 145 - 261
Target Start/End: Original strand, 45847901 - 45848017
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||| ||||||| |||||   |||||||||||||||||||||||||||||||||| ||||||  |||  || ||||| ||||||| |||||||||||    
T  45847901 ggtcaagcagcctaggggctaaagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgatccctgcacatattatgcattatccc 45848000  T
Q  245 ttatcaaatgagttaag 261  Q
    |||||||||||| ||||    
T  45848001 ttatcaaatgagataag 45848017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 45355694 - 45355803
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||  |||  |||||||  ||||||||||||||||||||    
T  45355694 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagt-gggtgtccggggttcgaaccccgacccctacacatattgtgcattatccct 45355792  T
Q  246 tatcaaatgag 256  Q
    ||  |||||||    
T  45355793 tactaaatgag 45355803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 45369435 - 45369544
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||  |||  |||||||  ||||||||||||||||||||    
T  45369435 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagt-gggtgtccggggttcgaaccccgacccctacacatattgtgcattatccct 45369533  T
Q  246 tatcaaatgag 256  Q
    ||  |||||||    
T  45369534 tactaaatgag 45369544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 48404113 - 48404232
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||| ||||||| ||||||  |||  ||| |||  ||||||| | ||||||| ||    
T  48404113 gtcaagtagcctagtggctaaagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaaccccgacacctacacatattatacattatctct 48404212  T
Q  246 tatcaaatgagttaagctca 265  Q
    ||||||||||| ||||||||    
T  48404213 tatcaaatgagctaagctca 48404232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 25234835 - 25234944
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    |||||||| ||||||| |||  ||||||||||||||||||||||| |||||||||  ||||||  ||||  ||||||  || ||||||||||||||||||    
T  25234835 tcaagtagtctagtggttagagaaattcaccttaaagatgaataactggggtgtctggggttcgaacctcaacccctacacttattgtgcattatccctt 25234934  T
Q  247 atcaaatgag 256  Q
    ||||||||||    
T  25234935 atcaaatgag 25234944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 43084552 - 43084447
Alignment:
Q  160 tggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagtta 259  Q
    |||||||  ||||||||||||||||||||||||||||||  ||||| |||  |||  ||||||| || |||||||||||||| ||||| |||||||||||    
T  43084552 tggctagagaaattcaccttaaagatgaataagtggggtaaccaggattcgaaccccgacccctatatatattgtgcattattccttaccaaatgagtta 43084453  T
Q  260 agctca 265  Q
    ||||||    
T  43084452 agctca 43084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 22096390 - 22096486
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||| ||||||||||||||||||| | ||||  |||| | |||||| |||||||||||||||||||||| ||||||| |||| ||||    
T  22096390 aaattcaccttaaaaatgaataagtggggtgtccggagttcgaacctcggcccctgcacatattgtgcattatcccttaccaaatgaattaaactca 22096486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 146 - 270
Target Start/End: Complemental strand, 42154685 - 42154561
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||||| || ||||||  ||||||||||||||||||| ||||||  |||||| ||||||  |||  |||| ||| |||||||||| |||||||||    
T  42154685 gtcaagtagcccagcggctagagaaattcaccttaaagatgattaagtgaagtgtccggggttcgaaccccgacctctgcacatattgtgaattatccct 42154586  T
Q  246 tatcaaatgagttaagctcacgaga 270  Q
    || ||||| ||||||||||| ||||    
T  42154585 taccaaataagttaagctcatgaga 42154561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 8716398 - 8716481
Alignment:
Q  178 ttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaag 261  Q
    |||||||| ||||||||||||||| |||||||  ||||||||  ||| ||||||||||||||||||||||||||||||| ||||    
T  8716398 ttaaagataaataagtggggtgtcgagggttcgaaccttgacttctgcacatattgtgcattatcccttatcaaatgagctaag 8716481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 2832048 - 2832166
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    ||||||| ||||||||||||   |||||||||||||||||||||||||||||||   ||||||  |||  |||||||| ||||||||||||| | |||||    
T  2832048 tcaagtaacctagtggctagaggaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctgcacatattgtgcatcacccctt 2832147  T
Q  247 atcaaatgagttaagctca 265  Q
    | || ||||| ||||||||    
T  2832148 accagatgagctaagctca 2832166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 38690782 - 38690666
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    ||||||||||| ||||||  |||||||||||||||  ||||||||||||||||| ||||||  |||  |||||||| | ||| | ||||||||||||||     
T  38690782 aagtagcctagcggctagagaaattcaccttaaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatcccttac 38690683  T
Q  249 caaatgagttaagctca 265  Q
    ||| |||| ||||||||    
T  38690682 caagtgagctaagctca 38690666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 27862842 - 27862926
Alignment:
Q  181 aagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||||||| ||||||  |||    |||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  27862842 aagatgaataagtggggtgtccggggttcgaaccccagcccctgcacaaattgtgcattatcccttatcaaatgagctaagctca 27862926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 26885376 - 26885495
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  |||| |||||||||||| ||||||||| |||||| ||||||  |||  | |||| | | ||| |||||||||||||     
T  26885376 gtcaagtagcctagtggctagagaaatccaccttaaagataaataagtggagtgtccggggttcgaaccccggccccagcatataatgtgcattatcccc 26885475  T
Q  246 tatcaaatgagttaagctca 265  Q
    |  |||||||| ||||||||    
T  26885476 tgccaaatgagctaagctca 26885495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 35909005 - 35909124
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacacct-tgacccctgtacatattgtgcattatccct 245  Q
    ||||||| | |||||| | | |||||||||||||||||| |||||||||||||||  || |||  ||||  |||||||| | ||||||||||||||||||    
T  35909005 tcaagtaacttagtggttggaaaaattcaccttaaagataaataagtggggtgtctgggattcgaacctccgacccctgcatatattgtgcattatccct 35909104  T
Q  246 tatcaaatgagttaagctca 265  Q
    ||  ||||||| ||||||||    
T  35909105 tacaaaatgagctaagctca 35909124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 37574392 - 37574329
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggtt 208  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||| || |||||    
T  37574392 ggtcaagtagcctagtggctagagaaattcaccttaaaggtgaataagtggggtgcccggggtt 37574329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 44251303 - 44251359
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcc 202  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||| ||||||||||    
T  44251303 gtcaaatagcctagcggctagaaaaattcaccttaaagatgaataaatggggtgtcc 44251359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 265
Target Start/End: Complemental strand, 52366291 - 52366207
Alignment:
Q  181 aagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||| ||||| || |||||  || |  ||||||| |||||||||||||||||||||| |||||||||||| ||||    
T  52366291 aagatgaataagtgaggtgttcatggttcgaacttcaacccctgcacatattgtgcattatcccttaccaaatgagttaaactca 52366207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 24253128 - 24253194
Alignment:
Q  190 aagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgag 256  Q
    ||||||||||||| ||||||  ||| ||||||| | ||| |||||||||||||||||||||||||||    
T  24253128 aagtggggtgtccggggttcgaaccctgaccccagcacaaattgtgcattatcccttatcaaatgag 24253194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 37889583 - 37889645
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||||||||||||  ||||||||||||||  |||||||||| ||||||| ||||||    
T  37889583 tcaagtagcctagtggctagagaaattcaccttaaaagtgaataagtgaggtgtccggggttc 37889645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 17329105 - 17329206
Alignment:
Q  152 tagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaa 251  Q
    ||||||||||| | |  ||||||| |||||||| |||||||||||||||| | |||| | |||| | |||||| | |||||| ||||||| |||||||||    
T  17329105 tagcctagtggttggagaaattcatcttaaagaggaataagtggggtgtctatggtttaaacctcggcccctgcatatattgcgcattattccttatcaa 17329204  T
Q  252 at 253  Q
    ||    
T  17329205 at 17329206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 23449069 - 23448985
Alignment:
Q  168 aaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaat 253  Q
    ||||| ||||||||| ||||||||||||||||| | ||||||  |||   ||||||| |||||||||||||||||||||| |||||    
T  23449069 aaaatccaccttaaa-atgaataagtggggtgttcggggttcgaaccccaacccctgcacatattgtgcattatcccttaccaaat 23448985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 2931180 - 2931133
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggg 196  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||    
T  2931180 aagtagtctagtggctagagaaattcaccttaaagatgaataagtggg 2931133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 24570306 - 24570208
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctcacg 267  Q
    ||||||||||||||| ||||||||| |||||| | ||||||  |||   ||||||  | |||||||||||||||||||| ||||   ||||||||||||    
T  24570306 aaattcaccttaaagttgaataagtagggtgttcggggttcgaaccccaacccctacatatattgtgcattatcccttaccaaaaatgttaagctcacg 24570208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 29430615 - 29430553
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||  || |||||||  ||||||||||||||||||||||||| |||||||| ||||||    
T  29430615 tcaagtagtttattggctagataaattcaccttaaagatgaataagtagggtgtccggggttc 29430553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 41034304 - 41034365
Alignment:
Q  27 cttcttttgccctcaattctaaacatcattatctctcttattttcttcaatttttgtctaaa 88  Q
    |||||||| ||||| ||| ||| | ||||||||||||||||||||||||| ||||| |||||    
T  41034304 cttcttttaccctccattttaagcgtcattatctctcttattttcttcaaattttgcctaaa 41034365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 12820389 - 12820444
Alignment:
Q  152 tagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    |||||||||||||||   ||||||||||| ||| |||||||||||||||||||||||||    
T  12820389 tagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccagggttc 12820444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 41271976 - 41272060
Alignment:
Q  168 aaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaa 252  Q
    |||| ||||||| |||||||||||||||||||||| | ||||  ||| ||| ||||| | | ||||| |||||||||||| ||||    
T  41271976 aaaaatcacctttaagatgaataagtggggtgtccggagttcgaaccctgaaccctgcataaattgtacattatcccttaccaaa 41272060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 49607992 - 49607940
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtc 201  Q
    |||||| |||||||||||  ||||||||||||||| | |||||||||||||||    
T  49607992 aagtagtctagtggctagagaaattcaccttaaaggtaaataagtggggtgtc 49607940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 49811384 - 49811436
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggt 198  Q
    |||||||||||||| ||||||  ||||||| ||||||| ||||||||||||||    
T  49811384 gtcaagtagcctagcggctagagaaattcatcttaaaggtgaataagtggggt 49811436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 8716599 - 8716556
Alignment:
Q  220 ccctgtacatattgtgcattatcccttatcaaatgagttaagct 263  Q
    ||||| |||||||||||||||||||||| |||||||| ||||||    
T  8716599 ccctgcacatattgtgcattatcccttaccaaatgagataagct 8716556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 13210146 - 13210259
Alignment:
Q  157 tagtggctagtaaaattcaccttaaagatgaataagtggggtgtcca------gggttcacaccttgacccctgtacatattgtgcattatcccttatca 250  Q
    ||||||||||  |||||||||||||| ||||||||||| |||||||       ||||||  |||  | |||||| |||||||||||||||||||| | ||    
T  13210146 tagtggctagagaaattcaccttaaa-atgaataagtgaggtgtccgtacccggggttcgaaccccggcccctgcacatattgtgcattatccctgacca 13210244  T
Q  251 aatgagttaagctca 265  Q
    |||||| ||||||||    
T  13210245 aatgagctaagctca 13210259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 265
Target Start/End: Original strand, 19687650 - 19687689
Alignment:
Q  226 acatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  19687650 acatattgtacattatcccttatcaaatgagttaatctca 19687689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 29269292 - 29269354
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||| |||||||||||||||   ||||||||| || |||||||||||||||||||||| ||||||    
T  29269292 ggtcaggtagcctagtggcta---aaattcaccatataagatgaataagtggggtgtccggggttc 29269354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 265
Target Start/End: Original strand, 31261764 - 31261799
Alignment:
Q  230 attgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||||||||||| |||||||||    
T  31261764 attgtgcattatcccttatcaaatgaattaagctca 31261799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 32296318 - 32296381
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||  ||||||||||  ||||||||| |||||||||||||| |||| ||||||| ||||    
T  32296318 gtcaagtaatctagtggctaaaaaaattcactttaaagatgaataaatgggatgtccagagttc 32296381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 49280647 - 49280709
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttca 210  Q
    ||||||||||||||||| |||   ||||||||||| ||| |||||||||| |||||||||||||||    
T  49280647 gtcaagtagcctagtggttag---aattcaccttataaggtgaataagtgaggtgtccagggttca 49280709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 56555668 - 56555613
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt 200  Q
    ||||| ||||||||  ||||||  ||||||||||||||| ||||||||||||||||    
T  56555668 ggtcaggtagcctaacggctagagaaattcaccttaaaggtgaataagtggggtgt 56555613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 22341838 - 22341892
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt 200  Q
    |||||||||||||| || |||  ||||||||||| |||||||| |||||||||||    
T  22341838 gtcaagtagcctagcggttagagaaattcacctttaagatgaacaagtggggtgt 22341892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 39992949 - 39992896
Alignment:
Q  149 aagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccag 204  Q
    ||||||||||||||||||   ||||||||||| ||| ||||||||||||||||||||    
T  39992949 aagtagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccag 39992896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 8690332 - 8690270
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||  |||||||| || ||  |||||||||||||||||| ||||||    
T  8690332 ggtcaggtagcctagtggctag--aaattcacttttaaagtgaataagtggggtgtccggggttc 8690270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 9693080 - 9693018
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||  |||||||| || ||  |||||||||||||||||| ||||||    
T  9693080 ggtcaggtagcctagtggctag--aaattcacttttaaagtgaataagtggggtgtccggggttc 9693018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 24234073 - 24234114
Alignment:
Q  170 aattcacctta-aagatgaataagtggggtgtccagggttca 210  Q
    ||||||||||| |||||||||||||||||||||| |||||||    
T  24234073 aattcaccttataagatgaataagtggggtgtccggggttca 24234114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 28520708 - 28520770
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||  |||||||| || ||  |||||||||||||||||| ||||||    
T  28520708 ggtcaggtagcctagtggctag--aaattcacttttaaagtgaataagtggggtgtccggggttc 28520770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 14149910 - 14149849
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||| ||||||||||||||||  |||||||| || ||  |||||||||||||||||| ||||||    
T  14149910 gtcaggtagcctagtggctag--aaattcacttttaaagtgaataagtggggtgtccggggttc 14149849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 21476058 - 21476113
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtcc 202  Q
    ||||||||||||||||||||||   ||||||| ||| |||||||||||||||| |||||    
T  21476058 ggtcaagtagcctagtggctag---aattcactttataagatgaataagtgggatgtcc 21476113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 48968188 - 48968249
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||| ||||||||||||||||  |||||||| || ||  |||||||||||||||||| ||||||    
T  48968188 gtcaggtagcctagtggctag--aaattcacttttaaagtgaataagtggggtgtccggggttc 48968249  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 49607646 - 49607614
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtc 201  Q
    ||||||||||||||| |||||||||||||||||    
T  49607646 aaattcaccttaaaggtgaataagtggggtgtc 49607614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 34107613 - 34107495
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||   ||| ||||||||| ||||||||||||||||||||    
T  34107613 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtcc-gggtttgaaccctgacccctgcacatattgtgcattatccct 34107515  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||||||||    
T  34107514 taccaaatgagctaagctca 34107495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 19843342 - 19843458
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    |||||||||||| |||||  |||||||||||||||||||||||||| |||||| |||||||  ||| ||||||||| ||||||||| ||| ||||||||     
T  19843342 aagtagcctagtagctagagaaattcaccttaaagatgaataagtgaggtgtctagggttcgaaccctgacccctgcacatattgtacatcatcccttac 19843441  T
Q  249 caaatgagttaagctca 265  Q
     ||||||||||||||||    
T  19843442 gaaatgagttaagctca 19843458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 41750065 - 41749947
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||| |||  |||||||  ||| ||||||||||||||||    
T  41750065 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagt-gggtgtccggggttcaaaccccgacccctacacacattgtgcattatccct 41749967  T
Q  246 tatcaaatgagttaagctca 265  Q
    |  |||||||| | ||||||    
T  41749966 tgccaaatgagcttagctca 41749947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 3330177 - 3330293
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||| |||| |||||| |||  |||||||||||||||||||||||||||||||||| ||||||  ||   |||| ||| ||||||||||||||||||||    
T  3330177 gtcaaatagcttagtggttagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccgacctctgcacatattgtgcattatccct 3330276  T
Q  246 tatcaaatgagttaagc 262  Q
    ||  |||||||||||||    
T  3330277 tactaaatgagttaagc 3330293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 33065232 - 33065352
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||| |||||| | | ||||  |||  |||||||  ||| |||||||||||||||    
T  33065232 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtagggtgttcggagttcgaaccccgacccctacacacattgtgcattatccc 33065331  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||  |||||||| ||||||||    
T  33065332 ttgccaaatgagctaagctca 33065352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 18949661 - 18949779
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| |||||||||||  |||||||| ||||| |||||||||| |||||| ||||||||  |||  |||||||| ||||||  |||||||||| |    
T  18949661 gtcaagtagtctagtggctagagaaattcacattaaa-atgaataagttgggtgttcagggttcgaaccccgacccctgcacatataatgcattatccgt 18949759  T
Q  246 tatcaaatgagttaagctca 265  Q
    ||||||||||||||||||||    
T  18949760 tatcaaatgagttaagctca 18949779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 43027275 - 43027155
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||| |||||||||||  ||||||||||||||| ||||||| |||||||||  ||||||  ||||   | || | ||| |||||||||||||||    
T  43027275 ggtcaagtagtctagtggctagagaaattcaccttaaaggtgaataaatggggtgtctggggttcgaacctcagcacccgcacaaattgtgcattatccc 43027176  T
Q  245 ttatcaaatgagttaagctca 265  Q
    |||||||||||| ||||||||    
T  43027175 ttatcaaatgagctaagctca 43027155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 18424131 - 18424244
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| ||||| | ||||  |||  | |||||| ||||||||||||||   |||||     
T  18424131 aagtagcctagtggctagagaaattcaccttaaagatgaataagtgggatgtccggagttcgaaccccggcccctgcacatattgtgcatt---ccttac 18424227  T
Q  249 caaatgagttaagctca 265  Q
    |||||||| ||||||||    
T  18424228 caaatgagctaagctca 18424244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 17543066 - 17543173
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||||||||||| |||  ||| |||| ||||||||||||||||||||||||| | ||||  ||   | |||||| ||||||||||||||||||||    
T  17543066 gtcaagtagcctagtggttagagaaagtcacattaaagatgaataagtggggtgtccggcgttcgaactccggcccctgcacatattgtgcattatccct 17543165  T
Q  246 tatcaaat 253  Q
    || |||||    
T  17543166 taccaaat 17543173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 31149078 - 31149196
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||||| ||||| |||  ||||||||||||||||| || ||||||||||||  ||||||  ||| | | ||||| ||||||||||||||||||||    
T  31149078 gtcaagtagccaagtggttagagaaattcaccttaaagattaaaaagtggggtgtctggggttcgaacc-tcaaccctgcacatattgtgcattatccct 31149176  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| || |||||    
T  31149177 taccaaatgagctatgctca 31149196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 40203256 - 40203374
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    |||||||| |||||||||||  ||||  |||||||| ||||||||||||||| ||  ||||||| ||| |||||| |  ||||||||| |||||||||||    
T  40203256 tcaagtagtctagtggctagagaaatctaccttaaaaatgaataagtggggtatctggggttcaaaccctgacccttacacatattgtacattatccctt 40203355  T
Q  247 atcaaatgagttaagctca 265  Q
    | | |||||| ||||||||    
T  40203356 accgaatgagctaagctca 40203374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 266
Target Start/End: Original strand, 25783193 - 25783309
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    |||||||||| |||||||  || |||||||| |||||||||||||||||||||||||||||  ||| | ||||||| | ||| | |||||||||||| |     
T  25783193 aagtagcctaatggctagagaacttcaccttgaagatgaataagtggggtgtccagggttcgaaccctaacccctgcatata-tatgcattatccctcac 25783291  T
Q  249 caaatgagttaagctcac 266  Q
    ||| |||| |||||||||    
T  25783292 caagtgagctaagctcac 25783309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 5901808 - 5901908
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    |||||||||||||||||||   ||||||||||| |||||||||||||||||||||| |||||   |||  | |||||| | | |||||||||||||||||    
T  5901808 tcaagtagcctagtggctaaagaaattcacctttaagatgaataagtggggtgtccggggtttgtaccccggcccctgcagaaattgtgcattatccctt 5901907  T
Q  247 a 247  Q
    |    
T  5901908 a 5901908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 1962944 - 1962830
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||| | |||| | ||||||||||||||||||||||||||||||||| | ||||  |||| |||||||| | | | | |||||||||| |    
T  1962944 gtcaagtagcctagcgactag-agaattcaccttaaagatgaataagtggggtgtccggagttcgaacctcgacccctgcatacaatatgcattatcctt 1962846  T
Q  246 tatcaaatgagttaag 261  Q
    || ||| |||||||||    
T  1962845 taccaagtgagttaag 1962830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 29090534 - 29090416
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||| |||| |  |||||||||||||||||||||||||| ||||||| ||||||  ||   | |||||||| |||   ||||||||||||    
T  29090534 gtcaagtagcctagcggctggagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaactccggcccctgtatata-aatgcattatccct 29090436  T
Q  246 tatcaaatgagttaagctca 265  Q
    ||||| ||||| ||||||||    
T  29090435 tatcatatgagctaagctca 29090416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 42678300 - 42678419
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||  ||||||| |||  |||||||||||||||||||||||||||||||||| ||||||  ||   || ||||   |||||||||||||||||||    
T  42678300 gtcaagtaatctagtggttagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaactccgatccctacgcatattgtgcattatccct 42678399  T
Q  246 tatcaaatgagttaagctca 265  Q
    || ||| | |||||| ||||    
T  42678400 taccaagtaagttaaactca 42678419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 6866627 - 6866510
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| ||| ||||||   ||||||||||||||||| |||||||| ||||||| || |||  ||   |   |||| ||||||||||||||||||||    
T  6866627 gtcaagtagtctactggctaaagaaattcaccttaaagataaataagtgaggtgtccgggattcgaactccggttcctgcacatattgtgcattatccct 6866528  T
Q  246 tatcaaatgagttaagct 263  Q
    || |||||||||||||||    
T  6866527 taccaaatgagttaagct 6866510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 37886224 - 37886264
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  37886224 aaattcaccttaaaggtgaataagtggggtgtccagggttc 37886264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 42541275 - 42541219
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtc 201  Q
    ||||||||||||||| ||||||  ||||||||||||||| ||| |||||||||||||    
T  42541275 ggtcaagtagcctagcggctagagaaattcaccttaaaggtgagtaagtggggtgtc 42541219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 11069336 - 11069440
Alignment:
Q  157 tagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgag 256  Q
    ||||||||||  ||||||| ||||||||||| ||    |||||||||||||||  |||   | ||||| |||||||||||||||| ||||| ||||||||    
T  11069336 tagtggctagagaaattcatcttaaagatgagta----gggtgtccagggttcgaaccccaaaccctgcacatattgtgcattattccttaccaaatgag 11069431  T
Q  257 ttaagctca 265  Q
     ||||||||    
T  11069432 ctaagctca 11069440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 33613581 - 33613644
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||||||||| |||| |||||  ||||||| ||||||| |||||||||||||||||| ||||||    
T  33613581 gtcaagtagcatagtagctagagaaattcaacttaaaggtgaataagtggggtgtccggggttc 33613644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 39462921 - 39462968
Alignment:
Q  153 agcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt 200  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  39462921 agcctagtggctagaaaaatccactttaaagatgaataagtggggtgt 39462968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 16403571 - 16403525
Alignment:
Q  219 cccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||||    
T  16403571 cccctgcacatattgtgcattatcccttaccaaatgagctaagctca 16403525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 24202270 - 24202148
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||| ||||||| |||| |  ||||||||||||||| ||||  |||||||||||| ||||||  |||  | |||||| | | ||  |||||||||||    
T  24202270 ggtcaagcagcctagcggctggagaaattcaccttaaaggtgaaatagtggggtgtccggggttcgaaccccggcccctgcatacataatgcattatccc 24202171  T
Q  245 ttatcaaatgagttaagctcacg 267  Q
    ||| ||| |||| ||||||||||    
T  24202170 ttaccaagtgagctaagctcacg 24202148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 36755714 - 36755620
Alignment:
Q  173 tcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctcacg 267  Q
    ||||||||||| ||||  ||| |||||||| ||||||| |||  ||||||| || ||||  | |||||||||||| ||| |||||||||||||||    
T  36755714 tcaccttaaaggtgaaatagttgggtgtccggggttcaaaccccgacccctatatatataatccattatcccttaccaagtgagttaagctcacg 36755620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 37592198 - 37592275
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccct 223  Q
    ||||||||| |||| ||||||  ||||||||||||||| | |||||||||||||||  ||||||  || |||||||||    
T  37592198 gtcaagtagtctagcggctagagaaattcaccttaaaggtaaataagtggggtgtctggggttcgaacattgacccct 37592275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 3402683 - 3402723
Alignment:
Q  154 gcctagtggctagtaaaattcaccttaaagatgaataagtg 194  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  3402683 gcctagtggctggaaaaattcaccttaaagatgaataagtg 3402723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 41541515 - 41541571
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtc 201  Q
    ||||||||||||||| ||| ||  ||||||||||||||  |||||||||||||||||    
T  41541515 ggtcaagtagcctagcggccagagaaattcaccttaaaagtgaataagtggggtgtc 41541571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 5207211 - 5207156
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtc 201  Q
    ||||||||| ||||||||||   ||||||| ||||||| |||||||||||||||||    
T  5207211 gtcaagtagtctagtggctaaagaaattcatcttaaaggtgaataagtggggtgtc 5207156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 265
Target Start/End: Original strand, 25553201 - 25553240
Alignment:
Q  226 acatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  25553201 acatattgtgcattatcccttaccaaatgaattaagctca 25553240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 29035092 - 29035032
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||||||||||||  |||||||| || ||  |||||||||||||||||| ||||||    
T  29035092 tcaagtagcctagtggctag--aaattcacttttaaagtgaataagtggggtgtccggggttc 29035032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Complemental strand, 32084956 - 32084922
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaa 181  Q
    |||||||||||||||||||| ||||||||||||||    
T  32084956 tcaagtagcctagtggctagaaaaattcaccttaa 32084922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 32891398 - 32891337
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    |||| ||||||||||||||||   |||||| |||| |||||||||||||||||||||| ||||||    
T  32891398 gtcaggtagcctagtggctag---aattcatcttataagatgaataagtggggtgtccggggttc 32891337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 8234775 - 8234831
Alignment:
Q  151 gtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||||||||   ||||||||||| ||| |||||||||||||||||| ||||||    
T  8234775 gtagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccggggttc 8234831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 20122458 - 20122514
Alignment:
Q  151 gtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||||||||   ||||||||||| ||||||||||||||| |||||| ||||||    
T  20122458 gtagcctagtggctag---aattcaccttataagatgaataagtggcgtgtccggggttc 20122514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 20435877 - 20435844
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtcc 202  Q
    |||||||||||||||||||||||||||| |||||    
T  20435877 aaattcaccttaaagatgaataagtgggatgtcc 20435844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 38413074 - 38413030
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataa 191  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||    
T  38413074 gtcaagtagcctagtgg-tagagaaattcaccttaaagatgaataa 38413030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 43684374 - 43684279
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctg--tacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    ||||||||||||||| |||||||||||||||| | ||||||  ||||   ||||||  |||| |   |||||||||||||| |||||||| ||||||||    
T  43684374 aaattcaccttaaaggtgaataagtggggtgttcggggttcgaacctcagcccctgcatacaaa---tgcattatcccttaccaaatgagctaagctca 43684279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 6270539 - 6270495
Alignment:
Q  157 tagtggctagtaaaattcaccttaaagatgaataagtggggtgtc 201  Q
    ||||||||||  ||||||||||||||||| |||||||| ||||||    
T  6270539 tagtggctagagaaattcaccttaaagataaataagtgaggtgtc 6270495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 9796993 - 9796953
Alignment:
Q  170 aattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  9796993 aattcaccttataagatgaataagtggggtgtccggggttc 9796953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 17270032 - 17269968
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||  ||||||||||  ||||||||||| | ||||||||||| |||||| ||| ||||    
T  17270032 ggtcaagtagtatagtggctagagaaattcacctttatgatgaataagttgggtgttcagcgttc 17269968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 20375689 - 20375657
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtc 201  Q
    ||||||||||||||||||||||||||| |||||    
T  20375689 aaattcaccttaaagatgaataagtggcgtgtc 20375657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 33482641 - 33482673
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtc 201  Q
    ||||||| |||||||||||||||||||||||||    
T  33482641 aaattcatcttaaagatgaataagtggggtgtc 33482673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 47864756 - 47864638
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||   ||||||| |||||||||||||||||||    
T  47864756 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccaacccctgcacatattgtgcattatccc 47864657  T
Q  245 ttatcaaatgagttaagct 263  Q
    ||| |||||||| ||||||    
T  47864656 ttaccaaatgagctaagct 47864638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 50381834 - 50381714
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||| || |||  |||  |||||||| | |||||||||||||||||    
T  50381834 ggtcaagcagcctaatggctagagaaattcaccttaaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatatattgtgcattatccc 50381735  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||||||||||||    
T  50381734 ttaccaaatgagttaagctca 50381714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 11483733 - 11483613
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||| ||||| |||||  |||||||||||||||||||||||||||||||||| | ||||  ||| || |||||| ||||||| |||||||||||    
T  11483733 ggtcaagtagtctagttgctagagaaattcaccttaaagatgaataagtggggtgtccggagttcgaaccctggcccctgcacatattttgcattatccc 11483634  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  11483633 ttaccaaatgagctaagctca 11483613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 33528180 - 33528300
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||  ||||||  |||    |||||| ||| |||||||||||||||    
T  33528180 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatccc 33528279  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  33528280 ttaccaaatgagctaagctca 33528300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 46798702 - 46798582
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||||||||||| |||  ||||  |||||||||||||||||||||||||||||||||||  | |  | |||||| |||||||||||||||||||    
T  46798702 ggtcaagtagcctagtggttagagaaatctaccttaaagatgaataagtggggtgtccagggttcgaatcccggcccctgcacatattgtgcattatccc 46798603  T
Q  245 ttatcaaatgagttaagctca 265  Q
    | | |||||||||||||||||    
T  46798602 tcaccaaatgagttaagctca 46798582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 27471623 - 27471512
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||| ||||||  |||   ||||||||||||||| ||||||||||||    
T  27471623 gtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaaccccaacccctgtacatattatgcattatccct 27471524  T
Q  246 tatcaaatgagt 257  Q
    || |||||||||    
T  27471523 taccaaatgagt 27471512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 39739393 - 39739274
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| |||||||||||  |||||||||||||||||||||||||| ||||||| ||||||  |||   | ||||| ||||||||||||||||||||    
T  39739393 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaaccccaatccctgcacatattgtgcattatccct 39739294  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||||||||    
T  39739293 taccaaatgagctaagctca 39739274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 27817044 - 27817162
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||| |||||||||| ||||||  ||   | |||||| ||| ||||||||||||||||    
T  27817044 gtcaagtagcctagtggctagagaaattcaacttaaagatgaataaatggggtgtcc-gggttcgaactccggcccctgcacaaattgtgcattatccct 27817142  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||||||||    
T  27817143 taccaaatgaggtaagctca 27817162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 55426230 - 55426114
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  |||||||||||||||||||    ||||||||||| ||||||  |||| | ||| || ||||||||||||||||||     
T  55426230 ggtcaagtagcctagtggctagagaaattcaccttaaagatga----gtggggtgtccggggttcgaacctcggcccatgcacatattgtgcattatcct 55426135  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  55426134 ttaccaaatgagctaagctca 55426114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 145 - 256
Target Start/End: Original strand, 22602178 - 22602289
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||| | ||||  || |||  |||| | |||||  |||||||||||||||| ||    
T  22602178 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtgcgatgtctgggattcgaacctcgtcccctacacatattgtgcattattcc 22602277  T
Q  245 ttatcaaatgag 256  Q
    ||| ||||||||    
T  22602278 ttaccaaatgag 22602289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 16141328 - 16141438
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||||||||||| |||  ||||| ||||| |||||||||||||||||||||  | ||||  |||    ||| ||||||||||||||||||||||    
T  16141328 ggtcaagtagcctagtggttagataaatttacctttaagatgaataagtggggtgtctggagttcgaaccccagcccttgtacatattgtgcattatccc 16141427  T
Q  245 ttatcaaatga 255  Q
    |||||||||||    
T  16141428 ttatcaaatga 16141438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 25165564 - 25165440
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaa---gatgaataagtgggg-tgtccagggttcacaccttgacccctgtacatattgtgcatta 240  Q
    ||||||| ||||||||||||||  ||||||||||||||   ||||||||||||||| ||||| ||||||  |||  |  ||||| |||||||||||||||    
T  25165564 ggtcaagcagcctagtggctagagaaattcaccttaaaaaagatgaataagtgggggtgtccggggttcgaaccccggtccctgcacatattgtgcatta 25165465  T
Q  241 tcccttatcaaatgagttaagctca 265  Q
    ||||||| |||||||| ||||||||    
T  25165464 tcccttaccaaatgagctaagctca 25165440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 31435477 - 31435578
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||  |||||  |||   ||||||  ||||||||||||||||||||    
T  31435477 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtgggatgtccgaggttcgaaccccaacccctacacatattgtgcattatccct 31435576  T
Q  246 ta 247  Q
    ||    
T  31435577 ta 31435578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 38415002 - 38414901
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||| ||| ||  ||||||||||||||| |||||||||||||||| ||| ||||| ||| ||||||||| | ||| | ||||||||||||    
T  38415002 gtcaagtagcctagcggccagagaaattcaccttaaaggtgaataagtggggtgttcagagttcaaaccctgacccctgcatataatatgcattatccct 38414903  T
Q  246 ta 247  Q
    ||    
T  38414902 ta 38414901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 985895 - 986011
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||  |||||||||||  ||||||||||| |||||||||||||||||||||| || |||| |||    |||||| ||| |||||||||||| |||    
T  985895 gtcaagtaatctagtggctagagaaattcacctttaagatgaataagtggggtgtccgggattcagaccccagcccctgcacaaattgtgcattatgcct 985994  T
Q  246 tatcaaatgagttaagc 262  Q
    || ||||| ||||||||    
T  985995 taccaaataagttaagc 986011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 29226422 - 29226326
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||||||||||||||||| | ||||||  |||  | |||||| ||||||||||  |||||||||| |||||||| ||||||||    
T  29226422 aaattcaccttaaagatgaataagtggggtgtacggggttcgaaccccggcccctgcacatattgtgtgttatcccttaccaaatgagctaagctca 29226326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 45431743 - 45431627
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    ||||||||||| ||||||  ||||||||||||||| |||||||||||||||||| ||||||  ||| ||||||||| | | | |  |||||||||||||     
T  45431743 aagtagcctagcggctagggaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccctgacccctgcataaaatacgcattatcccttac 45431644  T
Q  249 caaatgagttaagctca 265  Q
    ||| |||| ||||||||    
T  45431643 caagtgagctaagctca 45431627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 9320935 - 9321054
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||||||||||| |||  ||||||| ||| |||||||||||||||||||| | || |||  |||   ||||||| ||| ||||| ||||||||||    
T  9320935 gtcaagtagcctagtggttagagaaattcatctttaagatgaataagtggggtgttcgggtttcgaaccccaacccctgcacaaattgtacattatccct 9321034  T
Q  246 tatcaaatgagttaagctca 265  Q
    ||||||||||| ||| ||||    
T  9321035 tatcaaatgagctaaactca 9321054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 29645803 - 29645866
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| ||||||    
T  29645803 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttc 29645866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 32421467 - 32421348
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||  |||||||||| |||||||| ||||||||||||||||||||| || |  |||||  |||  |||||||| | ||||| ||||||||||||    
T  32421467 gtcaagtagtttagtggctagaaaaattcatcttaaagatgaataagtggggagttcgaggttcgaaccccgacccctgcatatattatgcattatccct 32421368  T
Q  246 tatcaaatgagttaagctca 265  Q
    || || ||||| ||||||||    
T  32421367 taccagatgagctaagctca 32421348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 46247382 - 46247260
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataag---tggggtgtccagggttcacaccttgacccctgtacatattgtgcattat 241  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||||   |||||||||  ||||||  |||    |||||| ||| ||||||||||||    
T  46247382 ggtcaagtagcctagtggc-agagaaattcaccttaaagatgaataagaagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattat 46247284  T
Q  242 cccttatcaaatgagttaagctca 265  Q
    |||||| |||||||| ||||||||    
T  46247283 cccttaccaaatgagctaagctca 46247260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 1102671 - 1102735
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||||| |||||    
T  1102671 ggtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccatggttc 1102735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 27394626 - 27394562
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttca 210  Q
    |||||||||||||| ||||||  ||||||||||||||| |||||||||||||||||| |||||||    
T  27394626 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttca 27394562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 38668248 - 38668192
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtc 201  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  38668248 ggtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggtgtc 38668192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 266
Target Start/End: Original strand, 23651049 - 23651166
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    ||||||||||  ||||||  |||||||| |||||  |||||||||||| |||||  |||||  |||| |||  || || ||||| ||||||||| |||||    
T  23651049 aagtagcctaagggctagataaattcactttaaatgtgaataagtgggatgtccgaggttcgaacctcgacttctatatatattatgcattatctcttat 23651148  T
Q  249 caaatgagttaagctcac 266  Q
    ||||||||||||||||||    
T  23651149 caaatgagttaagctcac 23651166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 49429580 - 49429461
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctg--tacatattgtgcattatc 242  Q
    |||||| |||| ||| ||||||  ||||||||||||||| |||||||||||||||||| ||||||  ||| ||  |||||  |||| |   |||||||||    
T  49429580 ggtcaaatagcttagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccctggtccctgcatacaaa---tgcattatc 49429484  T
Q  243 ccttatcaaatgagttaagctca 265  Q
    ||||| |||||||||||||||||    
T  49429483 ccttaccaaatgagttaagctca 49429461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 1325307 - 1325415
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagt-ggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||| ||||||||||   ||||||| ||||||||||||||| | ||||||||| ||||||  | |  || ||||||| |||||||||||||||||    
T  1325307 gtcaagtagtctagtggctaaagaaattcatcttaaagatgaataaatgggggtgtccggggttcgaatcccgatccctgtatatattgtgcattatccc 1325406  T
Q  245 ttatcaaat 253  Q
    ||| |||||    
T  1325407 ttaccaaat 1325415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 44062018 - 44062113
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatc 242  Q
    ||||||||| |||||||||||  | |||||||||||||||||||||||||||||| | ||||||  ||   | |||||| |||||||||||||||||    
T  44062018 gtcaagtagtctagtggctagagacattcaccttaaagatgaataagtggggtgt-cggggttcgaactccggcccctgcacatattgtgcattatc 44062113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 54457272 - 54457153
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||| ||||||  ||||||||||||||| ||||||| |||||||||| ||||| | |||    | |||  | | ||| ||||||||| ||    
T  54457272 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataaatggggtgtccggggtttaaaccccagctcctacataaattatgcattatctct 54457173  T
Q  246 tatcaaatgagttaagctca 265  Q
    |||||| |||||||||||||    
T  54457172 tatcaagtgagttaagctca 54457153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 145 - 267
Target Start/End: Complemental strand, 166908 - 166786
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||| |||||   |||||||| |||||| |||||||||| ||||||  ||||||  |||  | |||||| | | ||| |||||||||||    
T  166908 ggtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtgaggtgtctggggttcgaaccccggcccctgcataaattatgcattatccc 166809  T
Q  245 ttatcaaatgagttaagctcacg 267  Q
    ||| ||| |||| ||||||||||    
T  166808 ttaccaagtgagctaagctcacg 166786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 7518059 - 7517942
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||||||| |||||||   ||||||| || |||||| ||||||||||||| | ||||||  |||  | | |||| ||| |||||||| |||||||    
T  7518059 gtcaagtagcctaatggctagaggaattcacttttaagatggataagtggggtgttcggggttcgaaccgcggctcctgcacaaattgtgcaatatccct 7517960  T
Q  246 tatcaaatgagttaagct 263  Q
    || |||||||| ||||||    
T  7517959 taccaaatgagctaagct 7517942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 8930952 - 8931009
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcc 202  Q
    ||||||||||||||| ||||||  |||||||| |||||| ||||||||||||||||||    
T  8930952 ggtcaagtagcctagcggctagagaaattcactttaaaggtgaataagtggggtgtcc 8931009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 30162780 - 30162657
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcca-----gggttcacaccttgacccctgtacatattgtgcatta 240  Q
    ||||| ||||||||| |||||  |||||||||||||| ||||||||||| |||||||      ||||||  |||  | ||| || |||||||||||||||    
T  30162780 gtcaaatagcctagttgctagagaaattcaccttaaa-atgaataagtgaggtgtccgtgcccgggttcgaaccccggcccttgcacatattgtgcatta 30162682  T
Q  241 tcccttatcaaatgagttaagctca 265  Q
    ||||||| |||||||| ||||||||    
T  30162681 tcccttaccaaatgagctaagctca 30162657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 50676843 - 50676906
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||| ||||||| |||  ||||||||||||||| |||||||||||||||| | ||||||    
T  50676843 gtcaagtagtctagtggttagagaaattcaccttaaaggtgaataagtggggtgttcggggttc 50676906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 2259203 - 2259157
Alignment:
Q  219 cccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||||    
T  2259203 cccctgcacatattgtgcattatcccttaccaaatgagctaagctca 2259157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 30745217 - 30745267
Alignment:
Q  218 acccctgtacatattgtgcattatcccttatcaaatgagttaagctcacga 268  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||| |||||||    
T  30745217 acccctgtatatattatgcattatcccttatcaaatgagctaaactcacga 30745267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 34225241 - 34225195
Alignment:
Q  219 cccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||||    
T  34225241 cccctgcacatattgtgcattatcccttaccaaatgagctaagctca 34225195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 45510829 - 45510779
Alignment:
Q  219 cccctgtacatattgtgcattatcccttatcaaatgagttaagctcacgag 269  Q
    |||||| ||||||||| |||||| |||||||||||||||||| ||||||||    
T  45510829 cccctgcacatattgtacattattccttatcaaatgagttaaactcacgag 45510779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 33830367 - 33830455
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttga-cccctgtacatattgtgcattatcccttatcaaatgagt 257  Q
    |||||||||||||| ||||||||||||||||||  | ||||| | || || |||||| | ||||||||||||||| |||| |||||||||    
T  33830367 aaattcaccttaaaaatgaataagtggggtgtctggagttca-aactagagcccctgcatatattgtgcattatctcttaccaaatgagt 33830455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 8258200 - 8258152
Alignment:
Q  217 gacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||| ||||||||||||||| || ||| |||||||||||||||||    
T  8258200 gacccctgcacatattgtgcattaaccattaccaaatgagttaagctca 8258152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 43897722 - 43897666
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtc 201  Q
    ||||||||||||||  || |||  ||||||||||||||| |||||||||||||||||    
T  43897722 ggtcaagtagcctaacggttagagaaattcaccttaaaggtgaataagtggggtgtc 43897666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 33206875 - 33206813
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||   ||||||||||| ||| |||||||||||||||||| ||||||    
T  33206875 ggtcaggtagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccggggttc 33206813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 36763552 - 36763494
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctt---aaagatgaataagtggggtgtcc 202  Q
    |||||||||| |||||||||||  |||||||||||   |||||||||||||||||||||||    
T  36763552 ggtcaagtagtctagtggctag--aaattcacctttttaaagatgaataagtggggtgtcc 36763494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 46328901 - 46328963
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||   ||||||||||| ||| |||||||||||||||||| ||||||    
T  46328901 ggtcaggtagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccggggttc 46328963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 24136727 - 24136791
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacc---ttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||||||||||||||  |||||||||   |||||| |||||||||||||||||| ||||||    
T  24136727 ggtcaagtagcctagtggctag--aaattcacctttttaaag-tgaataagtggggtgtccggggttc 24136791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 31419679 - 31419581
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctcacg 267  Q
    |||||||| || ||| ||||||||||||||||   ||||||  |||    |||||  ||||||||||| || ||||||| |||||||||||||||||||    
T  31419679 aaattcacttttaaggtgaataagtggggtgtttggggttcgaaccccagcccctacacatattgtgcgttgtcccttaccaaatgagttaagctcacg 31419581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 33780350 - 33780312
Alignment:
Q  218 acccctgtacatattgtgcattatcccttatcaaatgag 256  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  33780350 acccctgtatatattgtgcattatcccttaccaaatgag 33780312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 36590514 - 36590390
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt------ccagggttcacaccttgacccctgtacatattgtgcatt 239  Q
    ||||| ||| |||||||||||  |||||||||||||| ||||||||||| |||||      || ||||||  |||  | |||||| ||||||||| ||||    
T  36590514 gtcaaatagtctagtggctagagaaattcaccttaaa-atgaataagtgaggtgtccgtgcccggggttcgaaccacggcccctgcacatattgtacatt 36590416  T
Q  240 atcccttatcaaatgagttaagctca 265  Q
    |||||||| |||||||| ||| ||||    
T  36590415 atcccttaccaaatgagctaatctca 36590390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 37133912 - 37133942
Alignment:
Q  172 ttcaccttaaagatgaataagtggggtgtcc 202  Q
    |||||||||||||||||||||||||||||||    
T  37133912 ttcaccttaaagatgaataagtggggtgtcc 37133942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 40160853 - 40160790
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcacctt---aaagatgaataagtggggtgtccagggttca 210  Q
    ||||||||||||||||||||   ||||||||||   |||| |||||||||||||||||| |||||||    
T  40160853 tcaagtagcctagtggctag---aattcacctttttaaaggtgaataagtggggtgtccggggttca 40160790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 27183658 - 27183720
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||  |||||||| || ||  |||||||||||||||||| ||||||    
T  27183658 ggtcaggtagcctagtggctag--aaattcacttttaaagtgaataagtggggtgtccggggttc 27183720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 28206520 - 28206588
Alignment:
Q  151 gtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttcacaccttgaccc 221  Q
    |||||||||||| |||   ||||||||||| ||| |||||||||||| ||||||||||||| |||| |||||    
T  28206520 gtagcctagtggttag---aattcaccttataaggtgaataagtgggatgtccagggttcaaacctcgaccc 28206588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 34344756 - 34344816
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggtt 208  Q
    |||| ||||||||||||||||   ||||||||||| ||| |||||||||||||||||| |||||    
T  34344756 gtcaggtagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccggggtt 34344816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 45583475 - 45583548
Alignment:
Q  183 gatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgag 256  Q
    |||||||||||||||||||  || |||  ||| | |||||| || ||||| |||||||||||||| ||||||||    
T  45583475 gatgaataagtggggtgtctgggattcgaaccctaacccctatatatattatgcattatcccttaccaaatgag 45583548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 335029 - 335069
Alignment:
Q  170 aattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  335029 aattcaccttataaggtgaataagtggggtgtccagggttc 335069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 9738452 - 9738420
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtc 201  Q
    ||||||||||||||||||||||||||| |||||    
T  9738452 aaattcaccttaaagatgaataagtggagtgtc 9738420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 42913445 - 42913489
Alignment:
Q  220 ccctgtacatattgtgcattatcccttatcaaatgagttaagctc 264  Q
    ||||| |||||||||||||| ||||||| |||||||| |||||||    
T  42913445 ccctgcacatattgtgcattttcccttagcaaatgagctaagctc 42913489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 31250267 - 31250147
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||  | |||||| |||||||||||||||||||    
T  31250267 ggtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccc 31250168  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  31250167 ttaccaaatgagctaagctca 31250147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 38503232 - 38503352
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||| ||| |||||||  |||||||||||||||||||||||||||||||||| ||||||  |||  | |||||| |||||||||||||||||||    
T  38503232 ggtcaagtagtctattggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccc 38503331  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  38503332 ttaccaaatgagctaagctca 38503352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 17077480 - 17077361
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| ||||||  | |  |||||||| ||| ||||||||||||||||    
T  17077480 gtcaagtagcctagtggctagataaattcacctttaagatgaataagtggggtgtccggggttcgaatcccgacccctgcacaaattgtgcattatccct 17077381  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||||||||    
T  17077380 taccaaatgagctaagctca 17077361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 43227974 - 43227866
Alignment:
Q  157 tagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgag 256  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||  | |||||| |||||||||||||||||||||| ||||||||    
T  43227974 tagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgag 43227875  T
Q  257 ttaagctca 265  Q
     ||||||||    
T  43227874 ctaagctca 43227866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 145 - 256
Target Start/End: Original strand, 33545362 - 33545472
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||  |||||| ||   |||||||| |||||||||||||||||||    
T  33545362 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataag-ggggtgtccgaggttcaaactccgacccctgcacatattgtgcattatccc 33545460  T
Q  245 ttatcaaatgag 256  Q
     || ||||||||    
T  33545461 atagcaaatgag 33545472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 1984168 - 1984284
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    ||||| |||||||||||| | |||||||||| |||||||||||||||| |||| |||||||  | || |||||||    | ||||||||||||||||||     
T  1984168 aagtaacctagtggctagaagaattcacctttaagatgaataagtgggatgtctagggttcgaaactcgacccctacgaaaattgtgcattatcccttac 1984267  T
Q  249 caaatgagttaagctca 265  Q
    |||||||||||||||||    
T  1984268 caaatgagttaagctca 1984284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 15470597 - 15470716
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||  ||||||||||  ||||||||||||||||||||||| |||||||||  ||||||  | ||   ||| || ||||||||||||||||||||    
T  15470597 gtcaagtagtttagtggctagagaaattcaccttaaagatgaataaatggggtgtctggggttcgaatctcagcccttgcacatattgtgcattatccct 15470696  T
Q  246 tatcaaatgagttaagctca 265  Q
    || ||||||| |||||||||    
T  15470697 taccaaatgaattaagctca 15470716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 42209035 - 42208917
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||| | ||||  |||| |  ||||| |||||||||| |||||||||    
T  42209035 gtcaagtagcctagtgactagagaaattcaccttaaagatgaataagtgaggtgtccggagttcgaacctcg-gccctgcacatattgtgtattatccct 42208937  T
Q  246 tatcaaatgagttaagctca 265  Q
    ||  ||||||| ||||||||    
T  42208936 tactaaatgagctaagctca 42208917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 43263302 - 43263213
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||| |||||||||||||| |||||||||||||||||       ||||||||||||| |||||||||||| |||| |||||||||||||||||    
T  43263302 aaattcactttaaagatgaataactggggtgtccagggttc-------gacccctgtacatgttgtgcattatctcttaccaaatgagttaagctca 43263213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 5039799 - 5039681
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| |||||||||||  ||||| ||||||||||||||||||||||||||||   ||||  |||  | ||| || ||||||||| |||||| |||    
T  5039799 gtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgtccgaagttcgaaccccggcccttgcacatattgtacattat-cct 5039701  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||||||||||||    
T  5039700 taccaaatgagttaagctca 5039681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 5263288 - 5263171
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||| || ||||||  ||||||  || |   |||||  |||||||||||||||||| |    
T  5263288 gtcaagtagcctagtggctagagaaattcagcttaaagatgaataaatgtggtgtctcgggttcgaacatcaccccctacacatattgtgcattatccat 5263189  T
Q  246 tatcaaatgagttaagct 263  Q
    || |||||||| ||||||    
T  5263188 taccaaatgagctaagct 5263171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 15106895 - 15106980
Alignment:
Q  178 ttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagct 263  Q
    ||||||||||||||||||||||||| ||||||  |||  |||| ||| ||| |||||||||||||||||| ||||| |||||||||    
T  15106895 ttaaagatgaataagtggggtgtccggggttcgaaccccgacctctgcacaaattgtgcattatcccttaccaaataagttaagct 15106980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 1572228 - 1572119
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    |||||||| |||||||||||  ||||||||||| ||||||||||||||||| |||| ||||||  |||    |||||| ||| | ||||||| |||||||    
T  1572228 tcaagtagtctagtggctagagaaattcacctttaagatgaataagtggggagtccggggttcgaaccccagcccctgcacaaaatgtgcataatccctt 1572129  T
Q  247 atcaaatgag 256  Q
    | ||||||||    
T  1572128 aacaaatgag 1572119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 146 - 266
Target Start/End: Complemental strand, 20191560 - 20191441
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| |||||||| ||  ||||| ||||||||| ||||||||||| |||||| ||||||  |||  |||||||| | |||   ||||||||||||    
T  20191560 gtcaagtagtctagtggccagagaaatttaccttaaaggtgaataagtggagtgtccggggttcgaaccccgacccctgcatata-aatgcattatccct 20191462  T
Q  246 tatcaaatgagttaagctcac 266  Q
    || ||| ||||||||||||||    
T  20191461 taccaagtgagttaagctcac 20191441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 4395827 - 4395946
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||| ||||||| |||||||  ||||||||||||||||||||||| |||||||||  ||||||  ||   | |||||| ||| ||| |||||||||  |    
T  4395827 gtcaaatagcctattggctagagaaattcaccttaaagatgaataaatggggtgtcaggggttcgaactccggcccctgcacacattatgcattatcatt 4395926  T
Q  246 tatcaaatgagttaagctca 265  Q
    |  |||||||||||||||||    
T  4395927 tgccaaatgagttaagctca 4395946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 42444015 - 42444093
Alignment:
Q  22 tctcccttcttttgccctcaattctaaacatcattatctctcttattttcttcaatttttgtctaaaatcactctacctt 101  Q
    |||| |||||||| ||||| ||| |||||||||||||||||||| |||||| || |||| ||||||| ||||||||||||    
T  42444015 tctcacttctttt-ccctccattataaacatcattatctctctttttttctccatttttcgtctaaagtcactctacctt 42444093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 12375383 - 12375507
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt------ccagggttcacaccttgacccctgtacatattgtgcatt 239  Q
    ||||| |||||||||||||||  |||||||||||||| ||||||||||| |||||      || ||||||  |||  | |||||| ||||||||||||||    
T  12375383 gtcaaatagcctagtggctagagaaattcaccttaaa-atgaataagtgaggtgtccgtgcccggggttcgaaccccggcccctgcacatattgtgcatt 12375481  T
Q  240 atcccttatcaaatgagttaagctca 265  Q
    |||| ||| |||||||| ||||||||    
T  12375482 atccattaccaaatgagctaagctca 12375507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 930913 - 931033
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||  ||||| ||||  ||||||||||| |||||||||||||||| ||||   |||||  |||   ||||||| |||||||||||||| ||||    
T  930913 ggtcaagtagtttagtgactagagaaattcacctttaagatgaataagtgggatgtctgaggttcgaaccccaacccctgcacatattgtgcattgtccc 931012  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| | |||||| || |||||    
T  931013 ttaccgaatgagctatgctca 931033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 15680877 - 15680933
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcc 202  Q
    |||||||||||||| || |||  ||||||||||||||| ||||||||||||||||||    
T  15680877 gtcaagtagcctagcggttagagaaattcaccttaaaggtgaataagtggggtgtcc 15680933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 34729567 - 34729481
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgag 256  Q
    ||||||||||||||| |||||||||||||||||| ||||||  |||  |||||||| | ||| | |||||||||||||| ||| ||||    
T  34729567 aaattcaccttaaaggtgaataagtggggtgtcc-gggttcgaaccccgacccctgcatataatatgcattatcccttaccaagtgag 34729481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 42355793 - 42355728
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacct--taaagatgaataagtggggtgtccagggttca 210  Q
    |||||||||||||| |||||||  ||||||||||  ||||| |||||||||||||||||| |||||||    
T  42355793 ggtcaagtagcctaatggctag--aaattcacctcttaaaggtgaataagtggggtgtccggggttca 42355728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 87887 - 87791
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||| |||||||  |||||||||  | ||||  ||   ||||| || | |||||||||||||||||||| |||||||||| ||||||    
T  87887 aaattcaccttaaaaatgaatagttggggtgtctggagttcgaactccgacccttgcatatattgtgcattatcccttaccaaatgagttgagctca 87791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 13576359 - 13576323
Alignment:
Q  229 tattgtgcattatcccttatcaaatgagttaagctca 265  Q
    ||||||||||||||||||| |||||||||||||||||    
T  13576359 tattgtgcattatcccttaccaaatgagttaagctca 13576323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 15696330 - 15696275
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcc 202  Q
    ||||| |||||||||||||||  |||||||||||||| ||||||||||| |||||||    
T  15696330 gtcaaatagcctagtggctagagaaattcaccttaaa-atgaataagtgaggtgtcc 15696275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 15696246 - 15696207
Alignment:
Q  226 acatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  15696246 acatattgtgcattatcccttatcaaatgagctaaactca 15696207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 26671701 - 26671646
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtc 201  Q
    |||||||| |||||||||||  |||||||||||  |||||||||||||||||||||    
T  26671701 tcaagtagtctagtggctagagaaattcaccttttaagatgaataagtggggtgtc 26671646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 26943298 - 26943243
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtc 201  Q
    |||||||| |||||||||||  |||||||||||  |||||||||||||||||||||    
T  26943298 tcaagtagtctagtggctagagaaattcaccttttaagatgaataagtggggtgtc 26943243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 35168632 - 35168671
Alignment:
Q  170 aattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  35168632 aattcaccttaaaggtgaataagtggggtgtccggggttc 35168671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 256
Target Start/End: Original strand, 42643850 - 42643889
Alignment:
Q  217 gacccctgtacatattgtgcattatcccttatcaaatgag 256  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  42643850 gacccctgcacatattgtgcattatcccttaccaaatgag 42643889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 7608123 - 7608157
Alignment:
Q  230 attgtgcattatcccttatcaaatgagttaagctc 264  Q
    |||||||||||||| ||||||||||||||||||||    
T  7608123 attgtgcattatcctttatcaaatgagttaagctc 7608157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 18478120 - 18478059
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    |||| |||||||| |||||||   ||||||||||| ||| |||||||||||||||||||||||||    
T  18478120 gtcaggtagcctaatggctag---aattcaccttataaggtgaataagtggggtgtccagggttc 18478059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 19058982 - 19059043
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    |||| |||| |||||||||||   ||||||||||| ||| |||||||||||||||||||||||||    
T  19058982 gtcaggtaggctagtggctag---aattcaccttataaggtgaataagtggggtgtccagggttc 19059043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 29096286 - 29096347
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    |||| ||||||||||||||||   ||||||||||| ||| |||||||||||||||||| ||||||    
T  29096286 gtcaggtagcctagtggctag---aattcaccttataaggtgaataagtggggtgtccggggttc 29096347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 29629923 - 29629984
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||||||| || ||||||||   ||||||||||| |||||||||||||| ||||||||||||||    
T  29629923 gtcaagtagtctggtggctag---aattcaccttataagatgaataagtgaggtgtccagggttc 29629984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 42902041 - 42902090
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtgg 195  Q
    |||||||||  ||||||||||  ||||| |||||||||||||||||||||    
T  42902041 gtcaagtagtttagtggctagagaaatttaccttaaagatgaataagtgg 42902090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 9628154 - 9628114
Alignment:
Q  228 atattgtgcattatcccttatcaaatgagttaagctcacga 268  Q
    ||||| ||||||||| |||| ||||||||||||||||||||    
T  9628154 atattatgcattatctcttaccaaatgagttaagctcacga 9628114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 11935244 - 11935196
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtg 194  Q
    |||||||||||||||| ||||  ||||| |||||||||| |||||||||    
T  11935244 gtcaagtagcctagtgactagagaaatttaccttaaagacgaataagtg 11935196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 18175327 - 18175271
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacct--taaagatgaataagtggggtgtc 201  Q
    |||| |||||||||||||||||  ||||||||||  |||||||||||||||||| ||||    
T  18175327 ggtctagtagcctagtggctag--aaattcacctcataaagatgaataagtgggatgtc 18175271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 20762377 - 20762337
Alignment:
Q  170 aattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  20762377 aattcaccttataaggtgaataagtggggtgtccagggttc 20762337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 26302490 - 26302526
Alignment:
Q  167 taaaattcacctta-aagatgaataagtggggtgtcc 202  Q
    |||||||||||||| ||||||||||||||||||||||    
T  26302490 taaaattcaccttataagatgaataagtggggtgtcc 26302526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 37304050 - 37303990
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||| |||||||||||||||   |||||||  |||||| |||||||||||||||||||||||||    
T  37304050 gtcaggtagcctagtggctat--aaattcattttaaag-tgaataagtggggtgtccagggttc 37303990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 24134599 - 24134719
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||  | |||||| |||||||||||||||||||    
T  24134599 ggtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccc 24134698  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  24134699 ttaccaaatgagctaagctca 24134719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 49620092 - 49619972
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||| ||||    |||  |||||||| |||||||||||||||||||    
T  49620092 ggtcaagtagcctagtggctagagaaattcactttaaagatgaataagtggggtgtccggggtctgaaccccgacccctgcacatattgtgcattatccc 49619993  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  49619992 ttaccaaatgagctaagctca 49619972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 14262697 - 14262816
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||| |||| ||||||||||  ||||||||||||||||||||||||| |||||||| ||||||  |||  |||||||| | ||||||||||||||||||    
T  14262697 gtcaaatagcttagtggctagagaaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacccctgcatatattgtgcattatccct 14262796  T
Q  246 tatcaaatgagttaagctca 265  Q
    ||||||||||||||| ||||    
T  14262797 tatcaaatgagttaatctca 14262816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 43109213 - 43109333
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||| || ||||||| ||||||  |||  | |||||| ||||||| |||||||||||    
T  43109213 ggtcaagtagcctagtggctagagaaattcaccttaaagatgaataaatgaggtgtccggggttcgaaccccggcccctgcacatattttgcattatccc 43109312  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  43109313 ttaccaaatgagctaagctca 43109333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 30735947 - 30735828
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||||||||||| |||  |||||||||||  ||||||||||||| ||||||||||||||| ||   | |||||| ||| ||||||||||||||||    
T  30735947 gtcaagtagcctagtggttagagaaattcacctttgagatgaataagtgtggtgtccagggttcaaactccggcccctgcacaaattgtgcattatccct 30735848  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||||||||||||    
T  30735847 taccaaatgagttaagctca 30735828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 40061562 - 40061443
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||| | ||||  |||    ||||| ||||||||||||| |||||||    
T  40061562 gtcaagtagcctagtggctagagaaatccaccttaaagatgaataagtggggtgtccggagttcgaaccccagcccctatacatattgtgcactatccct 40061463  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||||||||||||    
T  40061462 taccaaatgagttaagctca 40061443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 19424166 - 19424050
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||| ||||||  ||||||||||||||| |||||||||||||||||| ||||||  |||  |||||||| | ||| | |||||||||||    
T  19424166 ggtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatccc 19424067  T
Q  245 ttatcaaatgagttaag 261  Q
    |||||||||||| ||||    
T  19424066 ttatcaaatgagctaag 19424050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 10123029 - 10123147
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||   ||||||  |||  |||||||  |||||||||  |||||||||    
T  10123029 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctacacatattgt-aattatccct 10123127  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||||||||||||    
T  10123128 taccaaatgagttaagctca 10123147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 34702289 - 34702408
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| ||||||||||   ||||||| |||||||||||||||||| ||||||| ||||||  |||  | |||||| ||||||||||||||||||||    
T  34702289 gtcaagtagtctagtggctaaagaaattcatcttaaagatgaataagtgaggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 34702388  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||||||||    
T  34702389 taccaaatgagctaagctca 34702408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 147 - 265
Target Start/End: Complemental strand, 8893978 - 8893860
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    ||||||| |||||||| | |  ||||||||||||||||||||||||||||||||   ||||||  |||  ||||||||||||||||||||||||||||||    
T  8893978 tcaagtaacctagtggttggagaaattcaccttaaagatgaataagtggggtgtttggggttcgaaccccgacccctgtacatattgtgcattatccctt 8893879  T
Q  247 atcaaatgagttaagctca 265  Q
    | |||||||  ||||||||    
T  8893878 accaaatgaactaagctca 8893860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 50065126 - 50065012
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttat 248  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||  | |||  |||  |  ||||| |||||||||||||||||||||||    
T  50065126 aagtagcttagtggctagagaaattcaccttaaagatgaataagtggggtgtccgagattcgaaccccggtccctgcacatattgtgcattatcccttat 50065027  T
Q  249 caaatgagttaagct 263  Q
    |||||||| ||||||    
T  50065026 caaatgagctaagct 50065012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 3347679 - 3347800
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||| ||||||||| ||||  |||||||||||||||||||||||||||||||| | ||||||  |||  ||| |||| ||||||||| |||||||| |    
T  3347679 gtcaagcagcctagtgactagagaaattcaccttaaagatgaataagtggggtgtacggggttcgaaccccgactcctgaacatattgtacattatccat 3347778  T
Q  246 tatcaaatgagttaagctcacg 267  Q
    || |||||| ||||||||||||    
T  3347779 taccaaatgtgttaagctcacg 3347800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 4127019 - 4126899
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||| |||||||||| | ||||| || | | || ||| | |||||||||||||||||    
T  4127019 ggtcaagtagtctagtggctagataaattcaccttaaagatgaataaatggggtgtccggtgttcaaacatcggcctctgcatatattgtgcattatccc 4126920  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||| ||||    
T  4126919 ttaccaaatgagctaaactca 4126899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 7438741 - 7438621
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    |||||||||| ||||||||||   ||||||||||| |||||||||||||||||||||| | ||||  |||  |||||||  ||| |||||||||||||||    
T  7438741 ggtcaagtagtctagtggctaaagaaattcacctttaagatgaataagtggggtgtccggagttcgaaccccgacccctacacaaattgtgcattatccc 7438642  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  7438641 ttaccaaatgagctaagctca 7438621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 48497188 - 48497308
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||| ||| |||||| || |||  ||   | |||||| |||||||||||||||||||    
T  48497188 ggtcaagtagcctagtggctagagaaatttaccttaaagatgaataaatggagtgtccgggattcgaactccggcccctgcacatattgtgcattatccc 48497287  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||| ||||    
T  48497288 ttaccaaatgagctaaactca 48497308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 23368708 - 23368827
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| |||||||||||  ||||||||||| ||  |||||||||||||||||| ||||||  || | |  ||||| ||| | ||||||||||||||    
T  23368708 gtcaagtagactagtggctagataaattcacctttaatgtgaataagtggggtgtccggggttcgaacatcggtccctgcacaaaatgtgcattatccct 23368807  T
Q  246 tatcaaatgagttaagctca 265  Q
    ||||||||||| ||||||||    
T  23368808 tatcaaatgagctaagctca 23368827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 47651990 - 47651872
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||||||| |||| ||| |||  |||    |||||| ||||||||||||||||||||    
T  47651990 gtcaagtagcccagtggctagagaaattcaccttaaa-atgaataagtgggatgtctaggattcgaaccccagcccctgcacatattgtgcattatccct 47651892  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||||||||    
T  47651891 taccaaatgagctaagctca 47651872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 50011626 - 50011507
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| | ||| |||||  |||||||||||||||||||||||||||| ||||  ||||||  |||    |||||| ||||||||||||||||||||    
T  50011626 gtcaagtagtccagtagctagagaaattcaccttaaagatgaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatccct 50011527  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||||||||    
T  50011526 taccaaatgagctaagctca 50011507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 25031472 - 25031582
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| |  |||  |||  | |||||| ||||||| ||||||||| |    
T  25031472 ggtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggaattcgaaccccggcccctgcacatattatgcattatctc 25031571  T
Q  245 ttatcaaatga 255  Q
    ||| |||||||    
T  25031572 ttaccaaatga 25031582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 29332404 - 29332286
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||| ||||||  ||||||||||||||| |||||||||||||||||| ||||||| |||  | ||| ||  |||  | | |||||||||    
T  29332404 ggtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcaaaccccggcccatg--cattatatacattatccc 29332307  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||||||| |||||||||||||    
T  29332306 ttatcaagtgagttaagctca 29332286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 15417792 - 15417912
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||  | |||  |||    |||||  ||||||||||||||||||     
T  15417792 ggtcaagtagcctagtgactagagaaattcatcttaaagatgaataagtggggtgtccgagcttcgaaccccagcccctacacatattgtgcattatcct 15417891  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| |||||||| ||||||||    
T  15417892 ttaccaaatgagctaagctca 15417912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 27054815 - 27054690
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcca------gggttcacaccttgacccctgtacatattgtgcatt 239  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||| |||| | |      ||||||  |||  | |||||| | ||||||||||||    
T  27054815 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtgaggtgcctatgccgggggttcgaaccccggcccctgcagatattgtgcatt 27054716  T
Q  240 atcccttatcaaatgagttaagctca 265  Q
    |||||||| |||||||| ||||||||    
T  27054715 atcccttaccaaatgagctaagctca 27054690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 265
Target Start/End: Original strand, 49239822 - 49239935
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||| ||||||       |||||||  ||||||||  |||||||||    
T  49239822 ggtcaagtagcttagtggctagagaaatttaccttaaagatgaataagtggggtgtccggggttc-------gacccctacacatattgctcattatccc 49239914  T
Q  245 ttatcaaatgagttaagctca 265  Q
    ||| ||||| || ||||||||    
T  49239915 ttaccaaataagctaagctca 49239935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 12148572 - 12148668
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||||||||||||||||||  |||||   ||   |||||||| ||||||||| ||||||| ||||| ||||||| ||||||||    
T  12148572 aaattcaccttaaagatgaataagtggggtgtctggggtttgaactccgacccctgcacatattgtacattatcgcttataaaatgagctaagctca 12148668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 12973254 - 12973373
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    ||||||||| ||||||||||   ||||| |||||||||||||||||||||||||||  | |||   | || | |||||| | ||||||||||||||||||    
T  12973254 gtcaagtagtctagtggctaaagaaatttaccttaaagatgaataagtggggtgtcaggagtttgaatctcggcccctgcatatattgtgcattatccct 12973353  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||| ||||    
T  12973354 taccaaatgagctaaactca 12973373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 264
Target Start/End: Original strand, 52164370 - 52164465
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaagctc 264  Q
    |||||||||||||| || |||||||||||||||| |  |||  |||  || ||||| ||||||||||||||||| |||| ||||||||||||||||    
T  52164370 aaattcaccttaaaaattaataagtggggtgtccggaattcgaaccccgatccctgcacatattgtgcattatctcttaccaaatgagttaagctc 52164465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 145 - 266
Target Start/End: Original strand, 35195586 - 35195707
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||| ||||||  ||||| ||||||||| ||||||||||| |||| | ||||||  ||| ||  ||||| | ||| | |||||||||||    
T  35195586 ggtcaagtagcctagcggctagagaaatttaccttaaaggtgaataagtggagtgtacggggttcgaaccctggtccctgcatataatatgcattatccc 35195685  T
Q  245 ttatcaaatgagttaagctcac 266  Q
    |||| || |||| |||||||||    
T  35195686 ttattaagtgagctaagctcac 35195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 16985910 - 16985974
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||||||  ||||||| ||||||    
T  16985910 ggtcaagtaacctagtggctagagaaattcaccttaaagatgaataagttaggtgtccggggttc 16985974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 2017661 - 2017779
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||  ||||||||||  |||||||||||||| ||||| ||||||||||||| || |||  |||    ||  || ||||||||||||||||||||    
T  2017661 gtcaagtagtttagtggctagagaaattcaccttaaa-atgaacaagtggggtgtccgggattcgaaccccagcctatgcacatattgtgcattatccct 2017759  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||||||||    
T  2017760 taccaaatgagctaagctca 2017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 9527543 - 9527467
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttcacaccttgacccctg 224  Q
    |||| |||| |||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |||  ||||||||    
T  9527543 gtcaggtagtctagtggctag---aattcaccttataagatgaataagtggggtgtccagggttcaaaccccgacccctg 9527467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 42946442 - 42946507
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttca 210  Q
    ||||||||||||||  ||||||  ||||||||||| ||| |||||||||||||||||| |||||||    
T  42946442 ggtcaagtagcctaacggctagagaaattcacctttaaggtgaataagtggggtgtccggggttca 42946507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 149 - 256
Target Start/End: Original strand, 50302830 - 50302937
Alignment:
Q  149 aagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc-acaccttgacccctgtacatattgtgcattatccctta 247  Q
    |||||| |||||||||||  ||||||||||||||||||||||||| | |||| |||||||| |  ||  | || ||| ||||||| ||||||||||||||    
T  50302830 aagtagtctagtggctagagaaattcaccttaaagatgaataagtagagtgt-cagggttcgaaccccagccctctgcacatattatgcattatccctta 50302928  T
Q  248 tcaaatgag 256  Q
     ||||||||    
T  50302929 ccaaatgag 50302937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 29936658 - 29936713
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcc 202  Q
    |||||||||||| |||||||  |||||||| || ||||||||||||||||||||||    
T  29936658 tcaagtagcctaatggctagagaaattcacttttaagatgaataagtggggtgtcc 29936713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 264
Target Start/End: Original strand, 4684153 - 4684271
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||  ||||||||||   |||||||||||||||||||||| |||||| |||    |||  |||  |||||||  | ||||||| ||||||||||    
T  4684153 gtcaagtagtttagtggctagagtaattcaccttaaagatgaataaatggggtatccgaacttcgaaccccgacccctacatatattgtacattatccct 4684252  T
Q  246 tatcaaatgagttaagctc 264  Q
    || |||||||| |||||||    
T  4684253 taccaaatgaggtaagctc 4684271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 269
Target Start/End: Complemental strand, 22779341 - 22779219
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccctt 246  Q
    |||||||| ||| |||||||  |||||||  |||||| ||||||||||||||||   ||||||  |||  ||| |||||| | | | |||||||||||||    
T  22779341 tcaagtagtctattggctagagaaattcattttaaaggtgaataagtggggtgtttggggttcgaaccccgactcctgtataaaatatgcattatccctt 22779242  T
Q  247 atcaaatgagttaagctcacgag 269  Q
    | ||| |||| ||||||||||||    
T  22779241 accaagtgagctaagctcacgag 22779219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 25299979 - 25299878
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||||||| |||| |  |||||||||||  || ||||  ||||||||||||||||| |  ||| ||||||||| | ||||  |||||||||||    
T  25299979 ggtcaagtagcctagcggctggagaaattcaccttcgaggtgaaatagtggggtgtccagggtacgaaccctgacccctgcatatataatgcattatccc 25299880  T
Q  245 tt 246  Q
    ||    
T  25299879 tt 25299878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 29491587 - 29491526
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||||| |||||||||||||||  |||||||| |||||| |||||||||||||||||| ||||||    
T  29491587 ggtcaaatagcctagtggctag--aaattcactttaaag-tgaataagtggggtgtccggggttc 29491526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 31964591 - 31964656
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttca 210  Q
    ||||||||||| ||| |||||| |||||| || ||||||||||||||||| ||||| | |||||||    
T  31964591 ggtcaagtagcttagcggctagaaaaatttactttaaagatgaataagtgaggtgttcggggttca 31964656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 32635258 - 32635196
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacct-taaagatgaataagtggggtgtccagggttc 209  Q
    |||||||||||||||||||||  |||||||||| | ||| |||||||||||||||||| ||||||    
T  32635258 gtcaagtagcctagtggctag--aaattcacctcttaaggtgaataagtggggtgtccggggttc 32635196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 15550988 - 15550940
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtg 194  Q
    |||||||| |||||||||||   ||||||||||||||||||||||||||    
T  15550988 gtcaagtaacctagtggctacagaaattcaccttaaagatgaataagtg 15550940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 35309820 - 35309780
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  35309820 aaattcaccttaaagatgaataagtggggtgttcggggttc 35309780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 2350351 - 2350414
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||||||||||||| |||||   |||||||| |||||| |||||||||||||||| | ||||||    
T  2350351 gtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtggggtgttcggggttc 2350414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 15368923 - 15368861
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggttc 209  Q
    ||||| ||||||||||||||||   ||||||||||| || ||||||||||||||||||| ||||||    
T  15368923 ggtcaggtagcctagtggctag---aattcaccttataaaatgaataagtggggtgtccggggttc 15368861  T

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Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 15550925 - 15550886
Alignment:
Q  226 acatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  15550925 acatattgtgcattatcccttaccaaatgagataagctca 15550886  T

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Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 25800308 - 25800371
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggtt 208  Q
    ||||||||||| || ||| ||   ||||||||||| |||||||||||||||||||||| |||||    
T  25800308 ggtcaagtagcttaatggttaaagaaattcacctttaagatgaataagtggggtgtccggggtt 25800371  T

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Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 47428870 - 47428925
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt 200  Q
    |||||| |||| |||||||||   |||||||| |||||||||||||||||||||||    
T  47428870 ggtcaaatagcttagtggctaaagaaattcactttaaagatgaataagtggggtgt 47428925  T

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Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 22386284 - 22386330
Alignment:
Q  218 acccctgtacatattgtgcattatcccttatcaaatgagttaagctc 264  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||    
T  22386284 acccctgcacatattgtgcataatcccttaccaaatgagctaagctc 22386330  T

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Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 52720802 - 52720748
Alignment:
Q  147 tcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtc 201  Q
    |||||||| ||||||| |||  |||||||| ||||||||||||||||| ||||||    
T  52720802 tcaagtagtctagtggttagagaaattcactttaaagatgaataagtgtggtgtc 52720748  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 17350179 - 17350117
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttc 209  Q
    |||||| |||||||||||||||  |||||||| || ||  |||||||||||||||||| ||||||    
T  17350179 ggtcaaatagcctagtggctag--aaattcacttttaaagtgaataagtggggtgtccggggttc 17350117  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 39304253 - 39304298
Alignment:
Q  220 ccctgtacatattgtgcattatcccttatcaaatgagttaagctca 265  Q
    ||||| ||||||| |||||||||||||| |||||||| ||||||||    
T  39304253 ccctgcacatattatgcattatcccttaccaaatgagctaagctca 39304298  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 265
Target Start/End: Original strand, 22853828 - 22853856
Alignment:
Q  237 attatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||||||||||||||    
T  22853828 attatcccttatcaaatgagttaagctca 22853856  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 32660948 - 32660887
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcacct-taaagatgaataagtggggtgtccagggtt 208  Q
    |||||||||||||||||||||  |||||||||| | ||| |||| ||||||||||||| |||||    
T  32660948 gtcaagtagcctagtggctag--aaattcacctcttaaggtgaaaaagtggggtgtccggggtt 32660887  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 261
Target Start/End: Original strand, 35527335 - 35527426
Alignment:
Q  169 aaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatcccttatcaaatgagttaag 261  Q
    |||||| ||||| |||| ||||||||| ||||   ||||||| ||   |||||||  |||||||||||||||||||||| |||||||| ||||    
T  35527335 aaattctccttatagataaataagtggagtgtttggggttcaaactccgacccctc-acatattgtgcattatcccttaccaaatgagctaag 35527426  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 265
Target Start/End: Complemental strand, 44583616 - 44583588
Alignment:
Q  237 attatcccttatcaaatgagttaagctca 265  Q
    |||||||||||||||||||||||||||||    
T  44583616 attatcccttatcaaatgagttaagctca 44583588  T

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Target: scaffold0001 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 419831 - 419712
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccct 245  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||  | |||||| ||||||||| ||||||||||    
T  419831 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgttcattatccct 419732  T
Q  246 tatcaaatgagttaagctca 265  Q
    || |||||||| ||||||||    
T  419731 taccaaatgagctaagctca 419712  T

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Target: scaffold0204 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 10612 - 10571
Alignment:
Q  229 tattgtgcattatcccttatcaaatgagttaagctcacgaga 270  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  10612 tattgtgcattatcccttatcaaatgagctaagctcacgaga 10571  T

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Target: scaffold0108 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 18330 - 18370
Alignment:
Q  154 gcctagtggctagtaaaattcaccttaaagatgaataagtg 194  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  18330 gcctagtggctagaaaaattcaccttaaagatgaataagtg 18370  T

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Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 264
Target Start/End: Complemental strand, 146892 - 146774
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtccagggttcacaccttgacccctgtacatattgtgcattatccc 244  Q
    ||||||||||| ||| ||||||  ||||||||||| |||||||| | ||||| |||| |||||||| ||    | ||||| |||||||||||||| ||||    
T  146892 ggtcaagtagcgtagcggctagagaaattcacctttaagatgaacaggtggg-tgtctagggttcaaactccaatccctgcacatattgtgcattgtccc 146794  T
Q  245 ttatcaaatgagttaagctc 264  Q
    | |  |||||||||||||||    
T  146793 tcactaaatgagttaagctc 146774  T

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Target: scaffold0339 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 12648 - 12686
Alignment:
Q  156 ctagtggctagtaaaattcaccttaaagatgaataagtg 194  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  12648 ctagtggctagaaaaattcaccttaaagatgaataagtg 12686  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 121770 - 121894
Alignment:
Q  146 gtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgt------ccagggttcacaccttgacccctgtacatattgtgcatt 239  Q
    ||||| |||||||||||||||  |||||||||||||| ||||||||||| |||||      || ||||||  |||  |  ||||| ||||||||||||||    
T  121770 gtcaaatagcctagtggctagataaattcaccttaaa-atgaataagtgaggtgtccgtgcccggggttcgaaccccggtccctgcacatattgtgcatt 121868  T
Q  240 atcccttatcaaatgagttaagctca 265  Q
    ||||| || |||||||| ||||||||    
T  121869 atcccctaccaaatgagctaagctca 121894  T

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Target: scaffold0809 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 4783 - 4838
Alignment:
Q  145 ggtcaagtagcctagtggctagtaaaattcaccttaaagatgaataagtggggtgtcc 202  Q
    ||||||||||||||||||||||  |||||||| || ||  ||||||||||||||||||    
T  4783 ggtcaagtagcctagtggctag--aaattcacttttaaagtgaataagtggggtgtcc 4838  T

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Target: scaffold0687 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 1533 - 1478
Alignment:
Q  151 gtagcctagtggctagtaaaattcacctta-aagatgaataagtggggtgtccagggtt 208  Q
    ||||||||||||||||   |||||||| || |||||||||||||||||||||| |||||    
T  1533 gtagcctagtggctag---aattcaccctataagatgaataagtggggtgtccggggtt 1478  T

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